Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448800 | sp|Q9C5W7|TOM2A_ARATH | 66.434 | 286 | 88 | 3 | 4 | 289 | 3 | 280 | 1.77e-121 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448800 | G7JZV0 | 97.924 | 289 | 6 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050730 | Msa1448800 | 0.811319 | 7.429085e-51 | -8.615850e-47 |
| Msa1404720 | Msa1448800 | 0.809230 | 2.096822e-50 | -8.615850e-47 |
| Msa1439230 | Msa1448800 | 0.800357 | 1.496877e-48 | -8.615850e-47 |
| Msa0609970 | Msa1448800 | 0.800356 | 1.497761e-48 | -8.615850e-47 |
| Msa0692110 | Msa1448800 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa0713460 | Msa1448800 | 0.882617 | 8.961632e-71 | -8.615850e-47 |
| Msa0212750 | Msa1448800 | -0.808566 | 2.907781e-50 | -8.615850e-47 |
| Msa0471790 | Msa1448800 | 0.811956 | 5.401639e-51 | -8.615850e-47 |
| Msa1087470 | Msa1448800 | 0.809414 | 1.914800e-50 | -8.615850e-47 |
| Msa1218650 | Msa1448800 | 0.800691 | 1.279860e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448800 | MtrunA17_Chr5g0400291 | 97.924 | 289 | 6 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Msa1448800 | MtrunA17_Chr4g0054961 | 77.431 | 288 | 57 | 2 | 2 | 289 | 1 | 280 | 1.34e-158 | 442 |
| Msa1448800 | MtrunA17_Chr1g0182821 | 37.643 | 263 | 136 | 7 | 3 | 261 | 5 | 243 | 6.31e-51 | 168 |
| Msa1448800 | MtrunA17_Chr4g0010471 | 34.934 | 229 | 117 | 5 | 5 | 230 | 4 | 203 | 3.42e-28 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448800 | AT1G32400.2 | 66.434 | 286 | 88 | 3 | 4 | 289 | 3 | 280 | 1.80e-122 | 352 |
| Msa1448800 | AT1G32400.1 | 66.434 | 286 | 88 | 3 | 4 | 289 | 3 | 280 | 1.80e-122 | 352 |
| Msa1448800 | AT1G32400.3 | 66.434 | 286 | 88 | 3 | 4 | 289 | 3 | 280 | 1.80e-122 | 352 |
| Msa1448800 | AT2G20230.1 | 33.829 | 269 | 157 | 6 | 3 | 260 | 5 | 263 | 2.90e-38 | 136 |
| Msa1448800 | AT4G28770.1 | 37.634 | 186 | 103 | 4 | 84 | 267 | 106 | 280 | 1.96e-33 | 124 |
| Msa1448800 | AT4G28770.2 | 37.634 | 186 | 103 | 4 | 84 | 267 | 150 | 324 | 3.47e-33 | 124 |
| Msa1448800 | AT2G20740.2 | 36.158 | 177 | 91 | 5 | 85 | 253 | 12 | 174 | 3.07e-30 | 112 |
| Msa1448800 | AT2G20740.1 | 29.961 | 257 | 125 | 8 | 5 | 253 | 6 | 215 | 9.77e-30 | 112 |
| Msa1448800 | AT2G20740.3 | 31.111 | 135 | 71 | 5 | 125 | 251 | 3 | 123 | 1.18e-13 | 67.0 |
Find 103 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCATTGTTTCTTGTTT+TGG | 0.129815 | tig0032336:+2076 | Msa1448800:CDS |
| AAATTATCCCTGAGAGTTTA+TGG | 0.148621 | tig0032336:+364 | Msa1448800:five_prime_UTR |
| GGAAGAACTTACTGTTTATT+TGG | 0.179273 | tig0032336:-546 | None:intergenic |
| CTCCATGCATCATTTCTATT+TGG | 0.183792 | tig0032336:-4967 | None:intergenic |
| TCTTGTTAGCCCTTATTGTT+AGG | 0.196919 | tig0032336:+4806 | Msa1448800:CDS |
| GGTTTGGCTATTGTGGGTTA+TGG | 0.213085 | tig0032336:+869 | Msa1448800:CDS |
| GATAGTGCTCTAATTCAATT+TGG | 0.215025 | tig0032336:+980 | Msa1448800:CDS |
| AATAAGCCGAAAACAGTTTA+TGG | 0.226868 | tig0032336:+388 | Msa1448800:five_prime_UTR |
| GTGTACAGCTCTCACTTTAA+AGG | 0.229139 | tig0032336:+6573 | Msa1448800:three_prime_UTR |
| TCCCTCAACCAAAATTTAAA+AGG | 0.249770 | tig0032336:-759 | None:intergenic |
| GTTATTTATGTTCATAGTTT+AGG | 0.252858 | tig0032336:+6686 | Msa1448800:three_prime_UTR |
| GTTTGGCTATTGTGGGTTAT+GGG | 0.276554 | tig0032336:+870 | Msa1448800:CDS |
| ATTTGGGCGGCCGATGCTTT+TGG | 0.288143 | tig0032336:+997 | Msa1448800:CDS |
| TTGACCACAGAAATAATAAT+TGG | 0.291345 | tig0032336:-6502 | None:intergenic |
| AGGTTTATTTACTTATTTAT+TGG | 0.292003 | tig0032336:+2040 | Msa1448800:intron |
| TATTTACAGCCCTAACAATA+AGG | 0.297511 | tig0032336:-4816 | None:intergenic |
| TTGGCTGTGAGTTTGCTTGC+TGG | 0.304573 | tig0032336:-6396 | None:intergenic |
| TCCATGCATCATTTCTATTT+GGG | 0.305941 | tig0032336:-4966 | None:intergenic |
| TGGTGTGTTGTAGAGGCTTC+TGG | 0.307436 | tig0032336:+804 | Msa1448800:CDS |
| CAAATCAATGCCATGTGATA+TGG | 0.315687 | tig0032336:-6475 | None:intergenic |
| CATATCACATGGCATTGATT+TGG | 0.334231 | tig0032336:+6476 | Msa1448800:three_prime_UTR |
| ATGGGTTTCTCAGAGAGAAT+TGG | 0.349575 | tig0032336:+2536 | Msa1448800:CDS |
| GGCTGCCGAACTTGCTGCCT+TGG | 0.360568 | tig0032336:-4877 | None:intergenic |
| GCTTATTTCCATAAACTCTC+AGG | 0.366524 | tig0032336:-372 | None:intergenic |
| TTATTGTTAGGGCTGTAAAT+AGG | 0.366779 | tig0032336:+4818 | Msa1448800:CDS |
| TGTACAGCTCTCACTTTAAA+GGG | 0.369318 | tig0032336:+6574 | Msa1448800:three_prime_UTR |
| ACCTATTCTTTGACAAAAGC+TGG | 0.371812 | tig0032336:+2376 | Msa1448800:CDS |
| AGATGCTGATATCATTATCT+TGG | 0.383662 | tig0032336:+6729 | Msa1448800:three_prime_UTR |
| TCTTGGGATTGTCATCTTTG+AGG | 0.385647 | tig0032336:+2579 | Msa1448800:CDS |
| CTTGTTAGCCCTTATTGTTA+GGG | 0.391844 | tig0032336:+4807 | Msa1448800:CDS |
| GAAATTCCAACAGATAAAAC+TGG | 0.392680 | tig0032336:+2496 | Msa1448800:CDS |
| GGGTTATGGGATCTATTTGC+TGG | 0.393501 | tig0032336:+883 | Msa1448800:CDS |
| CATATTGACCGTGACTGGTT+TGG | 0.400411 | tig0032336:+853 | Msa1448800:CDS |
| CCATCAGGGTTACCAGTTGC+TGG | 0.403929 | tig0032336:+4928 | Msa1448800:CDS |
| ACTGTTGATCTTGGTAGAGC+TGG | 0.404760 | tig0032336:+2341 | Msa1448800:CDS |
| AACTTCATATTGACCGTGAC+TGG | 0.415431 | tig0032336:+848 | Msa1448800:CDS |
| ATTATTATTTCTGTGGTCAA+TGG | 0.415966 | tig0032336:+6505 | Msa1448800:three_prime_UTR |
| AGACAAGCAGGTCCACCATC+AGG | 0.420726 | tig0032336:+4913 | Msa1448800:CDS |
| ATTGTGAGATGGGTTGCTCT+TGG | 0.423628 | tig0032336:+2562 | Msa1448800:CDS |
| TTGTGAGATGGGTTGCTCTT+GGG | 0.426805 | tig0032336:+2563 | Msa1448800:CDS |
| TGGGTTTCTCAGAGAGAATT+GGG | 0.427310 | tig0032336:+2537 | Msa1448800:CDS |
| CGTGACTGGTTTGGCTATTG+TGG | 0.428490 | tig0032336:+862 | Msa1448800:CDS |
| TGGTCCGTTGTCCCAGCAAC+TGG | 0.432745 | tig0032336:-4940 | None:intergenic |
| TTAATCCAAGGCAGCAAGTT+CGG | 0.433091 | tig0032336:+4872 | Msa1448800:CDS |
| TTTAGTGGCACTGTTGATCT+TGG | 0.436265 | tig0032336:+2332 | Msa1448800:CDS |
| GTGGTCAATGGTGTTGAGAT+TGG | 0.437911 | tig0032336:+6517 | Msa1448800:three_prime_UTR |
| ATAGTGCTCTAATTCAATTT+GGG | 0.450779 | tig0032336:+981 | Msa1448800:CDS |
| GGTGTGTTGTAGAGGCTTCT+GGG | 0.459724 | tig0032336:+805 | Msa1448800:CDS |
| TATGCAGAAAACATATATAG+AGG | 0.465119 | tig0032336:+725 | Msa1448800:intron |
| TGGAACCTTTGCGACTCGGA+TGG | 0.465746 | tig0032336:-6376 | None:intergenic |
| CCGCTGACCGGAGAAATATC+TGG | 0.468496 | tig0032336:-956 | None:intergenic |
| GTGACTGGTTTGGCTATTGT+GGG | 0.470771 | tig0032336:+863 | Msa1448800:CDS |
| CATCATTTCTATTTGGGCGT+TGG | 0.476497 | tig0032336:-4960 | None:intergenic |
| TTGACAAATTGCCTAAGGCT+TGG | 0.479937 | tig0032336:+1044 | Msa1448800:CDS |
| ATTTACTTATTTATTGGTGT+CGG | 0.480194 | tig0032336:+2046 | Msa1448800:CDS |
| TTGCTGGAACCTTTGCGACT+CGG | 0.481319 | tig0032336:-6380 | None:intergenic |
| TGAAGTTTAAAAGCTTCAAA+AGG | 0.481784 | tig0032336:-832 | None:intergenic |
| GCTTCCAATTATTATTTCTG+TGG | 0.484440 | tig0032336:+6498 | Msa1448800:three_prime_UTR |
| AGAAAGATGGTGTGTTGTAG+AGG | 0.492994 | tig0032336:+797 | Msa1448800:exon |
| TTGATAAGGATACACAAATC+AGG | 0.493243 | tig0032336:-2132 | None:intergenic |
| GAATTGGGATATTGTGAGAT+GGG | 0.497392 | tig0032336:+2552 | Msa1448800:CDS |
| AGAATTGGGATATTGTGAGA+TGG | 0.498426 | tig0032336:+2551 | Msa1448800:CDS |
| ATTTACAGCCCTAACAATAA+GGG | 0.500669 | tig0032336:-4815 | None:intergenic |
| GGAACCTTTGCGACTCGGAT+GGG | 0.508031 | tig0032336:-6375 | None:intergenic |
| ATCTGGCGTTGGAGAAATGT+CGG | 0.508214 | tig0032336:-939 | None:intergenic |
| ATGCATGGAGTACACGGATG+AGG | 0.508700 | tig0032336:+4980 | Msa1448800:CDS |
| TTTATCGTCATCAGAAGTCT+TGG | 0.522604 | tig0032336:-915 | None:intergenic |
| TCCAACGCCAGATATTTCTC+CGG | 0.526278 | tig0032336:+949 | Msa1448800:CDS |
| TCTGGCGTTGGAGAAATGTC+GGG | 0.528483 | tig0032336:-938 | None:intergenic |
| TGAGACATCATAACTTAATG+TGG | 0.530278 | tig0032336:+6655 | Msa1448800:three_prime_UTR |
| ACACCATCTTTCTCTAACTG+TGG | 0.532257 | tig0032336:-787 | None:intergenic |
| CATCAGGGTTACCAGTTGCT+GGG | 0.538957 | tig0032336:+4929 | Msa1448800:CDS |
| TTGCTCAATAATAGACAAGC+AGG | 0.539753 | tig0032336:+4901 | Msa1448800:CDS |
| CTGTTGATCTTGGTAGAGCT+GGG | 0.542791 | tig0032336:+2342 | Msa1448800:CDS |
| CTTATTTCCATAAACTCTCA+GGG | 0.548689 | tig0032336:-371 | None:intergenic |
| ACCGGAGAAATATCTGGCGT+TGG | 0.558113 | tig0032336:-950 | None:intergenic |
| TCATCACTATCGTAATCTGC+TGG | 0.565871 | tig0032336:-4841 | None:intergenic |
| GTTACCAGTTGCTGGGACAA+CGG | 0.574204 | tig0032336:+4936 | Msa1448800:CDS |
| ATTGGAGCTACGACACGGAA+TGG | 0.578523 | tig0032336:+2103 | Msa1448800:CDS |
| ACAACCCATCCGAGTCGCAA+AGG | 0.579835 | tig0032336:+6371 | Msa1448800:CDS |
| AAACCACAGTTAGAGAAAGA+TGG | 0.580324 | tig0032336:+784 | Msa1448800:exon |
| CACAATAGCCAAACCAGTCA+CGG | 0.584267 | tig0032336:-861 | None:intergenic |
| TCATAACTTAATGTGGGCTG+TGG | 0.587060 | tig0032336:+6662 | Msa1448800:three_prime_UTR |
| GCTTGTCTATTATTGAGCAA+TGG | 0.590849 | tig0032336:-4898 | None:intergenic |
| ATGATGAGCTTATTAATCCA+AGG | 0.592571 | tig0032336:+4860 | Msa1448800:CDS |
| AAGCAAGCATACCAAGCCTT+AGG | 0.594368 | tig0032336:-1055 | None:intergenic |
| CGATTCTAAGCCATATCACA+TGG | 0.597438 | tig0032336:+6465 | Msa1448800:three_prime_UTR |
| ATGCAGAAAACATATATAGA+GGG | 0.597621 | tig0032336:+726 | Msa1448800:intron |
| GAGTACACGGATGAGGGAGA+AGG | 0.602719 | tig0032336:+4987 | Msa1448800:CDS |
| TGCATGGAGTACACGGATGA+GGG | 0.603602 | tig0032336:+4981 | Msa1448800:CDS |
| GACAAGCAGGTCCACCATCA+GGG | 0.606528 | tig0032336:+4914 | Msa1448800:CDS |
| AGAGCACTATCACCGCTGAC+CGG | 0.609186 | tig0032336:-968 | None:intergenic |
| GTGCTCTAATTCAATTTGGG+CGG | 0.609501 | tig0032336:+984 | Msa1448800:CDS |
| AGAGACACAGCCAAAAGCAT+CGG | 0.614496 | tig0032336:-1007 | None:intergenic |
| GAAATGATGCATGGAGTACA+CGG | 0.615934 | tig0032336:+4974 | Msa1448800:CDS |
| GAGACATCATAACTTAATGT+GGG | 0.617030 | tig0032336:+6656 | Msa1448800:three_prime_UTR |
| GCCCAAATAGAAATGATGCA+TGG | 0.623440 | tig0032336:+4965 | Msa1448800:CDS |
| GCAACTGGTAACCCTGATGG+TGG | 0.644952 | tig0032336:-4925 | None:intergenic |
| GAGATTACATGATGGTGCAG+CGG | 0.647361 | tig0032336:-6432 | None:intergenic |
| GTTGTATTGGAGCTACGACA+CGG | 0.649188 | tig0032336:+2098 | Msa1448800:CDS |
| CCAGCAACTGGTAACCCTGA+TGG | 0.655467 | tig0032336:-4928 | None:intergenic |
| CCAGATATTTCTCCGGTCAG+CGG | 0.660823 | tig0032336:+956 | Msa1448800:CDS |
| GACATGAAGAGATTACATGA+TGG | 0.674922 | tig0032336:-6440 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAGCAATAATAATTT+AGG | - | tig0032336:580-599 | None:intergenic | 10.0% |
| !! | TATTGTTAACTTAATAACTA+TGG | - | tig0032336:1299-1318 | None:intergenic | 15.0% |
| !! | AGGTTTATTTACTTATTTAT+TGG | + | tig0032336:2040-2059 | Msa1448800:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTCTTTCC+AGG | + | tig0032336:2474-2493 | Msa1448800:intron | 15.0% |
| !!! | TTTGGTTTTTTATTGTATTA+TGG | - | tig0032336:3423-3442 | None:intergenic | 15.0% |
| !! | AATAAAATTATTAACCAAGA+TGG | - | tig0032336:4200-4219 | None:intergenic | 15.0% |
| !! | AATAAAGAAATGTGAAAAAT+TGG | - | tig0032336:4551-4570 | None:intergenic | 15.0% |
| !!! | TTCTTATTATATTTTGTCTA+AGG | + | tig0032336:4754-4773 | Msa1448800:intron | 15.0% |
| !!! | TAGAGGAATATATTTTAATT+TGG | + | tig0032336:5217-5236 | Msa1448800:intron | 15.0% |
| !!! | ATACATCTATAGTTTTTTAA+AGG | + | tig0032336:5569-5588 | Msa1448800:intron | 15.0% |
| !! | AAAAACATTACATAAAATTC+CGG | - | tig0032336:6064-6083 | None:intergenic | 15.0% |
| !!! | AAAATTCCATAAACTGTTTT+CGG | - | tig0032336:397-416 | None:intergenic | 20.0% |
| !!! | TTGAACTACCTTTTAAATTT+TGG | + | tig0032336:751-770 | Msa1448800:five_prime_UTR | 20.0% |
| !! | AATTATGGCTAAAATGTAAT+TGG | + | tig0032336:1339-1358 | Msa1448800:intron | 20.0% |
| !! | ATTATGGCTAAAATGTAATT+GGG | + | tig0032336:1340-1359 | Msa1448800:intron | 20.0% |
| !! | GCTTCATAATGTAAAATTAA+AGG | + | tig0032336:1542-1561 | Msa1448800:intron | 20.0% |
| !!! | AGTTTCTTTTCTTAAACAAA+AGG | - | tig0032336:1610-1629 | None:intergenic | 20.0% |
| !! | AAACATGTGTAGAAAAAATA+AGG | - | tig0032336:1694-1713 | None:intergenic | 20.0% |
| !! | ATGATAACAAATAAAGCTTT+AGG | - | tig0032336:1838-1857 | None:intergenic | 20.0% |
| !! | ATTTACTTATTTATTGGTGT+CGG | + | tig0032336:2046-2065 | Msa1448800:CDS | 20.0% |
| !! | CTAAATCCAAAAATATTTCA+TGG | + | tig0032336:2165-2184 | Msa1448800:intron | 20.0% |
| !! | TATATTAATTGAAACTTGTG+TGG | - | tig0032336:2191-2210 | None:intergenic | 20.0% |
| !! | TTAATCGTTAAACGAATTAT+TGG | + | tig0032336:2279-2298 | Msa1448800:intron | 20.0% |
| !!! | AACAAAGTATTCAATTTTAG+TGG | + | tig0032336:2317-2336 | Msa1448800:intron | 20.0% |
| !!! | AATTTATGATCTGAAATTGA+AGG | + | tig0032336:2426-2445 | Msa1448800:intron | 20.0% |
| !!! | GAGATTTTGATATGATATAT+GGG | + | tig0032336:2518-2537 | Msa1448800:CDS | 20.0% |
| !! | TAAACAAAAAGTTGTTTGAT+TGG | + | tig0032336:2602-2621 | Msa1448800:intron | 20.0% |
| !! | AAACACAAATTATAGAGAAA+GGG | - | tig0032336:2944-2963 | None:intergenic | 20.0% |
| !! | AAAACACAAATTATAGAGAA+AGG | - | tig0032336:2945-2964 | None:intergenic | 20.0% |
| !! | ATTAACATTGAATGAACATT+AGG | - | tig0032336:3102-3121 | None:intergenic | 20.0% |
| !! | TATCAAATTAACAAACTTGT+CGG | - | tig0032336:3190-3209 | None:intergenic | 20.0% |
| !!! | TTGATAATGATTGAAAATGA+AGG | + | tig0032336:3204-3223 | Msa1448800:intron | 20.0% |
| !!! | TTGTATTATGGATTTTCTTA+TGG | - | tig0032336:3411-3430 | None:intergenic | 20.0% |
| !! | TTGAAAATACTTGGATAAAA+GGG | - | tig0032336:3853-3872 | None:intergenic | 20.0% |
| !! | TTTCAATTTCAAATTGGATT+GGG | + | tig0032336:4061-4080 | Msa1448800:intron | 20.0% |
| !!! | GATAGAAATTGTTTTTCATT+TGG | + | tig0032336:5497-5516 | Msa1448800:intron | 20.0% |
| !! | GAAAAATGTCTTATGTAAAA+AGG | - | tig0032336:6118-6137 | None:intergenic | 20.0% |
| !! | GTTATTTATGTTCATAGTTT+AGG | + | tig0032336:6686-6705 | Msa1448800:three_prime_UTR | 20.0% |
| !! | ATAATAATTTAGGATGCGTT+TGG | - | tig0032336:570-589 | None:intergenic | 25.0% |
| ! | TAATTTCCTTCTACAAATTG+AGG | + | tig0032336:596-615 | Msa1448800:intron | 25.0% |
| ! | AAATCGAAACTATCAAAACA+TGG | - | tig0032336:669-688 | None:intergenic | 25.0% |
| ! | TATGCAGAAAACATATATAG+AGG | + | tig0032336:725-744 | Msa1448800:intron | 25.0% |
| ! | ATGCAGAAAACATATATAGA+GGG | + | tig0032336:726-745 | Msa1448800:intron | 25.0% |
| !!! | TACCTTTTAAATTTTGGTTG+AGG | + | tig0032336:757-776 | Msa1448800:five_prime_UTR | 25.0% |
| !!! | ACCTTTTAAATTTTGGTTGA+GGG | + | tig0032336:758-777 | Msa1448800:five_prime_UTR | 25.0% |
| ! | TGAAGTTTAAAAGCTTCAAA+AGG | - | tig0032336:835-854 | None:intergenic | 25.0% |
| ! | ATAGTGCTCTAATTCAATTT+GGG | + | tig0032336:981-1000 | Msa1448800:CDS | 25.0% |
| !! | TATATTTTGCTGCATTAGTT+TGG | + | tig0032336:1169-1188 | Msa1448800:intron | 25.0% |
| !! | AACTTGCTTCAGAAAAATTA+TGG | + | tig0032336:1324-1343 | Msa1448800:intron | 25.0% |
| ! | CAAATCCAAGCATAAAAATA+TGG | - | tig0032336:1450-1469 | None:intergenic | 25.0% |
| !!! | CATATTTTTATGCTTGGATT+TGG | + | tig0032336:1448-1467 | Msa1448800:intron | 25.0% |
| ! | TTACAGTAATGACAAATACA+AGG | - | tig0032336:1796-1815 | None:intergenic | 25.0% |
| !!! | GCTTTATTTGTTATCATTCA+TGG | + | tig0032336:1841-1860 | Msa1448800:intron | 25.0% |
| !! | TGATATTATGAGTTGAACAT+TGG | - | tig0032336:1896-1915 | None:intergenic | 25.0% |
| ! | TTAATTGCATGTTTCATGTT+TGG | + | tig0032336:2016-2035 | Msa1448800:intron | 25.0% |
| ! | TTGAATACTTTGTTCACTTA+AGG | - | tig0032336:2311-2330 | None:intergenic | 25.0% |
| ! | TTTCAGATCATAAATTACCA+TGG | - | tig0032336:2422-2441 | None:intergenic | 25.0% |
| !! | ATCTGAAATTGAAGGTATAT+GGG | + | tig0032336:2434-2453 | Msa1448800:intron | 25.0% |
| !!! | GGAGATTTTGATATGATATA+TGG | + | tig0032336:2517-2536 | Msa1448800:CDS | 25.0% |
| !! | ATATTCATGGGATGATATTT+TGG | - | tig0032336:2708-2727 | None:intergenic | 25.0% |
| ! | AAATATCATCCCATGAATAT+TGG | + | tig0032336:2708-2727 | Msa1448800:intron | 25.0% |
| ! | ACTTATCAACCAATATTCAT+GGG | - | tig0032336:2720-2739 | None:intergenic | 25.0% |
| ! | TACTTATCAACCAATATTCA+TGG | - | tig0032336:2721-2740 | None:intergenic | 25.0% |
| !! | TTATTTGTCTAAAGAGCATA+CGG | - | tig0032336:2759-2778 | None:intergenic | 25.0% |
| ! | TGCTCTTTAGACAAATAAAT+AGG | + | tig0032336:2761-2780 | Msa1448800:intron | 25.0% |
| ! | ACCTAATGTTCATTCAATAA+AGG | + | tig0032336:3004-3023 | Msa1448800:intron | 25.0% |
| ! | CCTAATGTTCATTCAATAAA+GGG | + | tig0032336:3005-3024 | Msa1448800:intron | 25.0% |
| ! | TACTTAGCTAATTATTTGTC+TGG | - | tig0032336:3266-3285 | None:intergenic | 25.0% |
| ! | ATGACCATTCTTATAGATAT+AGG | + | tig0032336:3290-3309 | Msa1448800:intron | 25.0% |
| !!! | TTTCTTATGGTTTTAGTTCT+TGG | - | tig0032336:3398-3417 | None:intergenic | 25.0% |
| ! | TCAAAAAGGAATTCTTAGTT+TGG | - | tig0032336:3441-3460 | None:intergenic | 25.0% |
| !! | ACTAAGAATTCCTTTTTGAA+AGG | + | tig0032336:3442-3461 | Msa1448800:intron | 25.0% |
| ! | GAATATCATTCCTTTCAAAA+AGG | - | tig0032336:3455-3474 | None:intergenic | 25.0% |
| !! | TACTTTTGCGACATTATTTT+GGG | - | tig0032336:3648-3667 | None:intergenic | 25.0% |
| ! | GTTGAAAATACTTGGATAAA+AGG | - | tig0032336:3854-3873 | None:intergenic | 25.0% |
| ! | AATGTAAATGGATCAAAGTT+AGG | + | tig0032336:3911-3930 | Msa1448800:intron | 25.0% |
| ! | CTTTCAATTTCAAATTGGAT+TGG | + | tig0032336:4060-4079 | Msa1448800:intron | 25.0% |
| ! | ATTGATTATTAACACCATCT+TGG | + | tig0032336:4183-4202 | Msa1448800:intron | 25.0% |
| ! | TGTTTGTCAAACAAAAAATC+TGG | + | tig0032336:4727-4746 | Msa1448800:intron | 25.0% |
| !!! | ACTTTTAATTGTACAGAAAC+AGG | - | tig0032336:5187-5206 | None:intergenic | 25.0% |
| ! | TCTAATATCAACATTTCTTC+TGG | - | tig0032336:5392-5411 | None:intergenic | 25.0% |
| ! | ATAATCTTTGATAGATTTCC+TGG | + | tig0032336:5423-5442 | Msa1448800:intron | 25.0% |
| ! | ATTACATAAAATTCCGGTTA+AGG | - | tig0032336:6058-6077 | None:intergenic | 25.0% |
| ! | TGAATTGTGATCAATATGTT+AGG | + | tig0032336:6210-6229 | Msa1448800:intron | 25.0% |
| ! | GAATTGTGATCAATATGTTA+GGG | + | tig0032336:6211-6230 | Msa1448800:intron | 25.0% |
| ! | TTGACCACAGAAATAATAAT+TGG | - | tig0032336:6505-6524 | None:intergenic | 25.0% |
| !!! | ATTATTATTTCTGTGGTCAA+TGG | + | tig0032336:6505-6524 | Msa1448800:three_prime_UTR | 25.0% |
| !! | TGAGAGAAATATATCTTTTG+TGG | + | tig0032336:6545-6564 | Msa1448800:three_prime_UTR | 25.0% |
| ! | GAAAAACTAACTCAATCTTT+CGG | - | tig0032336:6758-6777 | None:intergenic | 25.0% |
| AAATTATCCCTGAGAGTTTA+TGG | + | tig0032336:364-383 | Msa1448800:five_prime_UTR | 30.0% | |
| CTTATTTCCATAAACTCTCA+GGG | - | tig0032336:374-393 | None:intergenic | 30.0% | |
| AATAAGCCGAAAACAGTTTA+TGG | + | tig0032336:388-407 | Msa1448800:five_prime_UTR | 30.0% | |
| GGAAGAACTTACTGTTTATT+TGG | - | tig0032336:549-568 | None:intergenic | 30.0% | |
| ! | GTTCAATTTGTTTGATTAGC+AGG | + | tig0032336:637-656 | Msa1448800:intron | 30.0% |
| GACTGATATGCATTGAATAA+TGG | + | tig0032336:691-710 | Msa1448800:intron | 30.0% | |
| TCCCTCAACCAAAATTTAAA+AGG | - | tig0032336:762-781 | None:intergenic | 30.0% | |
| GATAGTGCTCTAATTCAATT+TGG | + | tig0032336:980-999 | Msa1448800:CDS | 30.0% | |
| !!! | CTTTTTTGACAAATTGCCTA+AGG | + | tig0032336:1039-1058 | Msa1448800:CDS | 30.0% |
| ! | TTACTTCTTTGACTCGTAAA+AGG | + | tig0032336:1133-1152 | Msa1448800:intron | 30.0% |
| ! | ATTATTGTCCTCTAAGAGAT+TGG | + | tig0032336:1239-1258 | Msa1448800:intron | 30.0% |
| AATGTATTCCAATCTCTTAG+AGG | - | tig0032336:1250-1269 | None:intergenic | 30.0% | |
| ATCAAACTGAATACACATAG+TGG | - | tig0032336:1426-1445 | None:intergenic | 30.0% | |
| !! | TGATGCCATATTTTTATGCT+TGG | + | tig0032336:1442-1461 | Msa1448800:intron | 30.0% |
| TCTGTGCTTAAGTAATAACT+AGG | + | tig0032336:1519-1538 | Msa1448800:intron | 30.0% | |
| CTGTGCTTAAGTAATAACTA+GGG | + | tig0032336:1520-1539 | Msa1448800:intron | 30.0% | |
| GCTAAGCTTATTTCGTTATT+TGG | + | tig0032336:1564-1583 | Msa1448800:intron | 30.0% | |
| CAAGGACAAAATACTACATA+TGG | - | tig0032336:1778-1797 | None:intergenic | 30.0% | |
| AAGAATTACGACAAAGTGAA+AGG | - | tig0032336:1933-1952 | None:intergenic | 30.0% | |
| CGTATGCATATTGTTTGTAT+AGG | + | tig0032336:1957-1976 | Msa1448800:intron | 30.0% | |
| !! | CTCTTCATTGTTTCTTGTTT+TGG | + | tig0032336:2076-2095 | Msa1448800:CDS | 30.0% |
| !!! | GTTTCTTGTTTTGGTTGTAT+TGG | + | tig0032336:2085-2104 | Msa1448800:CDS | 30.0% |
| TTGATAAGGATACACAAATC+AGG | - | tig0032336:2135-2154 | None:intergenic | 30.0% | |
| TTAGCATAAGACGTTTGATA+AGG | - | tig0032336:2149-2168 | None:intergenic | 30.0% | |
| GAAGTAAGTAAAATTCTCCA+TGG | + | tig0032336:2402-2421 | Msa1448800:intron | 30.0% | |
| ! | GATCTGAAATTGAAGGTATA+TGG | + | tig0032336:2433-2452 | Msa1448800:intron | 30.0% |
| ! | TTTTATCTGTTGGAATTTCC+TGG | - | tig0032336:2495-2514 | None:intergenic | 30.0% |
| GAAATTCCAACAGATAAAAC+TGG | + | tig0032336:2496-2515 | Msa1448800:CDS | 30.0% | |
| !! | AAATCTCCAGTTTTATCTGT+TGG | - | tig0032336:2505-2524 | None:intergenic | 30.0% |
| ! | TATTTGTCTAAAGAGCATAC+GGG | - | tig0032336:2758-2777 | None:intergenic | 30.0% |
| ACCAAAACATTCAGAAAGAA+AGG | + | tig0032336:2860-2879 | Msa1448800:intron | 30.0% | |
| ! | ACCTTTCTTTCTGAATGTTT+TGG | - | tig0032336:2864-2883 | None:intergenic | 30.0% |
| TTTCACACATGCAATCATTA+AGG | + | tig0032336:2911-2930 | Msa1448800:intron | 30.0% | |
| CCCTTTATTGAATGAACATT+AGG | - | tig0032336:3008-3027 | None:intergenic | 30.0% | |
| ! | TTTCAGTCTGAAATTTCCAA+TGG | + | tig0032336:3128-3147 | Msa1448800:intron | 30.0% |
| GGATCCTATATCTATAAGAA+TGG | - | tig0032336:3297-3316 | None:intergenic | 30.0% | |
| !!! | TATGGTTTTAGTTCTTGGTT+TGG | - | tig0032336:3393-3412 | None:intergenic | 30.0% |
| AAATGCTGTGGAAATCATAT+TGG | + | tig0032336:3508-3527 | Msa1448800:intron | 30.0% | |
| !! | CTACTTTTGCGACATTATTT+TGG | - | tig0032336:3649-3668 | None:intergenic | 30.0% |
| TAGTGGTTGTTGAAAATACT+TGG | - | tig0032336:3862-3881 | None:intergenic | 30.0% | |
| TGTAGAATTGATGAACTTAG+TGG | - | tig0032336:3879-3898 | None:intergenic | 30.0% | |
| TCATCAATTCTACAGCAATA+AGG | + | tig0032336:3885-3904 | Msa1448800:intron | 30.0% | |
| CATCAATTCTACAGCAATAA+GGG | + | tig0032336:3886-3905 | Msa1448800:intron | 30.0% | |
| GCAATAAGGGTAAATGTAAA+TGG | + | tig0032336:3899-3918 | Msa1448800:intron | 30.0% | |
| ! | CCAATTTGAAATTGAAAGCT+CGG | - | tig0032336:4058-4077 | None:intergenic | 30.0% |
| !! | TTTTGAGAGCAGAAAAACAA+GGG | + | tig0032336:4154-4173 | Msa1448800:intron | 30.0% |
| TCTCACTAGAAAAGATTTAG+AGG | + | tig0032336:4450-4469 | Msa1448800:intron | 30.0% | |
| ! | GAAAAGATTTAGAGGTACAA+TGG | + | tig0032336:4458-4477 | Msa1448800:intron | 30.0% |
| !!! | TTTTTGATGGTGGATAATCA+GGG | - | tig0032336:4630-4649 | None:intergenic | 30.0% |
| !!! | TTTTTTGATGGTGGATAATC+AGG | - | tig0032336:4631-4650 | None:intergenic | 30.0% |
| GATTATCCACCATCAAAAAA+AGG | + | tig0032336:4631-4650 | Msa1448800:intron | 30.0% | |
| ATTTACAGCCCTAACAATAA+GGG | - | tig0032336:4818-4837 | None:intergenic | 30.0% | |
| TATTTACAGCCCTAACAATA+AGG | - | tig0032336:4819-4838 | None:intergenic | 30.0% | |
| TTATTGTTAGGGCTGTAAAT+AGG | + | tig0032336:4818-4837 | Msa1448800:CDS | 30.0% | |
| ATGATGAGCTTATTAATCCA+AGG | + | tig0032336:4860-4879 | Msa1448800:CDS | 30.0% | |
| TCCATGCATCATTTCTATTT+GGG | - | tig0032336:4969-4988 | None:intergenic | 30.0% | |
| TATCTGATATTATGTTCTGC+TGG | + | tig0032336:5039-5058 | Msa1448800:intron | 30.0% | |
| ATTTGGTATATCTAAGCACT+TGG | + | tig0032336:5234-5253 | Msa1448800:intron | 30.0% | |
| TTTGGTATATCTAAGCACTT+GGG | + | tig0032336:5235-5254 | Msa1448800:intron | 30.0% | |
| CTAGGAACTTGGTTATTATT+GGG | - | tig0032336:5356-5375 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTGTGCAGAACC+AGG | - | tig0032336:5444-5463 | None:intergenic | 30.0% |
| ATGACAGTTGTACTATAATC+AGG | - | tig0032336:5753-5772 | None:intergenic | 30.0% | |
| CTGTCATCAAATATGATTCA+TGG | - | tig0032336:5822-5841 | None:intergenic | 30.0% | |
| AATGCAATGACATTATAGTC+AGG | - | tig0032336:5910-5929 | None:intergenic | 30.0% | |
| GAGACATCAAATCAATAGAA+TGG | - | tig0032336:6011-6030 | None:intergenic | 30.0% | |
| TTGATGTCTCAATTCTCAAA+TGG | + | tig0032336:6021-6040 | Msa1448800:intron | 30.0% | |
| !! | ATTCTGTTTTGTGCTTTTTG+TGG | - | tig0032336:6093-6112 | None:intergenic | 30.0% |
| ATATTGATCACAATTCAGAG+TGG | - | tig0032336:6207-6226 | None:intergenic | 30.0% | |
| !! | GCTTCCAATTATTATTTCTG+TGG | + | tig0032336:6498-6517 | Msa1448800:three_prime_UTR | 30.0% |
| TGAGACATCATAACTTAATG+TGG | + | tig0032336:6655-6674 | Msa1448800:three_prime_UTR | 30.0% | |
| GAGACATCATAACTTAATGT+GGG | + | tig0032336:6656-6675 | Msa1448800:three_prime_UTR | 30.0% | |
| AGATGCTGATATCATTATCT+TGG | + | tig0032336:6729-6748 | Msa1448800:three_prime_UTR | 30.0% | |
| GCTTATTTCCATAAACTCTC+AGG | - | tig0032336:375-394 | None:intergenic | 35.0% | |
| ! | TAAGCACTTGTGCAAGTTTT+CGG | - | tig0032336:509-528 | None:intergenic | 35.0% |
| AGCTAACCTCAATTTGTAGA+AGG | - | tig0032336:605-624 | None:intergenic | 35.0% | |
| AAACCACAGTTAGAGAAAGA+TGG | + | tig0032336:784-803 | Msa1448800:exon | 35.0% | |
| TTTATCGTCATCAGAAGTCT+TGG | - | tig0032336:918-937 | None:intergenic | 35.0% | |
| ACAATGATATGCCCCAAAAA+TGG | - | tig0032336:1096-1115 | None:intergenic | 35.0% | |
| ! | AGTTGATTCTTAAGTGTCTC+TGG | - | tig0032336:1374-1393 | None:intergenic | 35.0% |
| !!! | CTCTCATCAATTAGCTTTTG+AGG | + | tig0032336:1395-1414 | Msa1448800:intron | 35.0% |
| !!! | ATCAATTAGCTTTTGAGGCA+TGG | + | tig0032336:1400-1419 | Msa1448800:intron | 35.0% |
| ! | GCTTTATTCACTTCCTAGAA+TGG | + | tig0032336:1642-1661 | Msa1448800:intron | 35.0% |
| !! | CACTTTTTGTGTACCATTCT+AGG | - | tig0032336:1658-1677 | None:intergenic | 35.0% |
| GTCATTACTGTAAATTGACG+AGG | + | tig0032336:1803-1822 | Msa1448800:intron | 35.0% | |
| ATTACGACAAAGTGAAAGGA+AGG | - | tig0032336:1929-1948 | None:intergenic | 35.0% | |
| CAATTAAAGTGAGACAGTAC+TGG | - | tig0032336:2003-2022 | None:intergenic | 35.0% | |
| ! | GTGTGGCCATGAAATATTTT+TGG | - | tig0032336:2174-2193 | None:intergenic | 35.0% |
| CACAAAACGTCACATACAAA+GGG | - | tig0032336:2243-2262 | None:intergenic | 35.0% | |
| ACACAAAACGTCACATACAA+AGG | - | tig0032336:2244-2263 | None:intergenic | 35.0% | |
| ! | GCTTTTGTCAAAGAATAGGT+AGG | - | tig0032336:2376-2395 | None:intergenic | 35.0% |
| ACCTATTCTTTGACAAAAGC+TGG | + | tig0032336:2376-2395 | Msa1448800:CDS | 35.0% | |
| ! | TCCAGCTTTTGTCAAAGAAT+AGG | - | tig0032336:2380-2399 | None:intergenic | 35.0% |
| AGAATTGGGATATTGTGAGA+TGG | + | tig0032336:2551-2570 | Msa1448800:CDS | 35.0% | |
| GAATTGGGATATTGTGAGAT+GGG | + | tig0032336:2552-2571 | Msa1448800:CDS | 35.0% | |
| AGGTCTAATTATGCAAACCT+AGG | + | tig0032336:2880-2899 | Msa1448800:intron | 35.0% | |
| GGTCTAATTATGCAAACCTA+GGG | + | tig0032336:2881-2900 | Msa1448800:intron | 35.0% | |
| AATAGCATTAGAGTAGGTGA+AGG | - | tig0032336:2981-3000 | None:intergenic | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | tig0032336:3079-3098 | None:intergenic | 35.0% | |
| TAGGTGTACAATACACCAAA+TGG | - | tig0032336:3083-3102 | None:intergenic | 35.0% | |
| AAATTTCCAATGGTCATGCA+AGG | + | tig0032336:3138-3157 | Msa1448800:intron | 35.0% | |
| CTGGAATTAATGGAACTGTA+AGG | - | tig0032336:3240-3259 | None:intergenic | 35.0% | |
| CTAATTATTTGTCTGGCAAC+TGG | - | tig0032336:3259-3278 | None:intergenic | 35.0% | |
| GGATCCAAAGTTCATAATGT+AGG | + | tig0032336:3311-3330 | Msa1448800:intron | 35.0% | |
| AGGTCCTACATTATGAACTT+TGG | - | tig0032336:3318-3337 | None:intergenic | 35.0% | |
| AGTGAATCCCAAAGAATACA+GGG | + | tig0032336:3539-3558 | Msa1448800:intron | 35.0% | |
| ATCTCGTGTTTGAACATTGA+CGG | + | tig0032336:3590-3609 | Msa1448800:intron | 35.0% | |
| GCTGAAGACTAACATAATTG+TGG | + | tig0032336:3678-3697 | Msa1448800:intron | 35.0% | |
| AATACGATAAACTGTGCTTC+AGG | + | tig0032336:3706-3725 | Msa1448800:intron | 35.0% | |
| ATCCAACACAAAAACACCTA+TGG | - | tig0032336:3745-3764 | None:intergenic | 35.0% | |
| !! | GGATAAAAGGGTTCACTTTT+GGG | - | tig0032336:3841-3860 | None:intergenic | 35.0% |
| ! | TGGATAAAAGGGTTCACTTT+TGG | - | tig0032336:3842-3861 | None:intergenic | 35.0% |
| GCGATTCTACGAGAAAATTT+GGG | - | tig0032336:3966-3985 | None:intergenic | 35.0% | |
| TGCGATTCTACGAGAAAATT+TGG | - | tig0032336:3967-3986 | None:intergenic | 35.0% | |
| CCGAGCTTTCAATTTCAAAT+TGG | + | tig0032336:4055-4074 | Msa1448800:intron | 35.0% | |
| GAATGCTTGAAATCTTGATG+AGG | + | tig0032336:4099-4118 | Msa1448800:intron | 35.0% | |
| !! | CTTTTGAGAGCAGAAAAACA+AGG | + | tig0032336:4153-4172 | Msa1448800:intron | 35.0% |
| TTGACAGTCATCAATGACAA+CGG | + | tig0032336:4228-4247 | Msa1448800:intron | 35.0% | |
| ! | AAACAAAGCCTTTTCCCTTT+AGG | + | tig0032336:4254-4273 | Msa1448800:intron | 35.0% |
| AGATAGTCCAATAGCTATAG+AGG | + | tig0032336:4411-4430 | Msa1448800:intron | 35.0% | |
| GATAGTCCAATAGCTATAGA+GGG | + | tig0032336:4412-4431 | Msa1448800:intron | 35.0% | |
| TAAAGAGAAATGAAGTCACG+AGG | + | tig0032336:4570-4589 | Msa1448800:intron | 35.0% | |
| !!! | TACCTCTCTCCTTTTTTTGA+TGG | - | tig0032336:4643-4662 | None:intergenic | 35.0% |
| ! | AAAAAGGAGAGAGGTATACT+TGG | + | tig0032336:4647-4666 | Msa1448800:intron | 35.0% |
| ! | AAAAGGAGAGAGGTATACTT+GGG | + | tig0032336:4648-4667 | Msa1448800:intron | 35.0% |
| TCTTGTTAGCCCTTATTGTT+AGG | + | tig0032336:4806-4825 | Msa1448800:CDS | 35.0% | |
| CTTGTTAGCCCTTATTGTTA+GGG | + | tig0032336:4807-4826 | Msa1448800:CDS | 35.0% | |
| GCTTGTCTATTATTGAGCAA+TGG | - | tig0032336:4901-4920 | None:intergenic | 35.0% | |
| TTGCTCAATAATAGACAAGC+AGG | + | tig0032336:4901-4920 | Msa1448800:CDS | 35.0% | |
| CTCCATGCATCATTTCTATT+TGG | - | tig0032336:4970-4989 | None:intergenic | 35.0% | |
| ! | TAAAAGTATGCTCTCACTAG+AGG | + | tig0032336:5200-5219 | Msa1448800:intron | 35.0% |
| !!! | CCTTGATCACTAGCTTTTAA+GGG | - | tig0032336:5268-5287 | None:intergenic | 35.0% |
| !!! | TCCTTGATCACTAGCTTTTA+AGG | - | tig0032336:5269-5288 | None:intergenic | 35.0% |
| TTAAAAGCTAGTGATCAAGG+AGG | + | tig0032336:5268-5287 | Msa1448800:intron | 35.0% | |
| TAAAAGCTAGTGATCAAGGA+GGG | + | tig0032336:5269-5288 | Msa1448800:intron | 35.0% | |
| GCTAGGAACTTGGTTATTAT+TGG | - | tig0032336:5357-5376 | None:intergenic | 35.0% | |
| TGACCATTTATGTGTGTAAG+AGG | - | tig0032336:5717-5736 | None:intergenic | 35.0% | |
| TGTCTCAATTCTCAAATGGA+TGG | + | tig0032336:6025-6044 | Msa1448800:intron | 35.0% | |
| AGATTGCTAAATAACAGAGC+TGG | - | tig0032336:6143-6162 | None:intergenic | 35.0% | |
| TTTAGTCACATAGCTGATCA+TGG | + | tig0032336:6266-6285 | Msa1448800:intron | 35.0% | |
| GACATGAAGAGATTACATGA+TGG | - | tig0032336:6443-6462 | None:intergenic | 35.0% | |
| CAAATCAATGCCATGTGATA+TGG | - | tig0032336:6478-6497 | None:intergenic | 35.0% | |
| !! | CATATCACATGGCATTGATT+TGG | + | tig0032336:6476-6495 | Msa1448800:three_prime_UTR | 35.0% |
| TGTACAGCTCTCACTTTAAA+GGG | + | tig0032336:6574-6593 | Msa1448800:three_prime_UTR | 35.0% | |
| ACACCATCTTTCTCTAACTG+TGG | - | tig0032336:790-809 | None:intergenic | 40.0% | |
| AGAAAGATGGTGTGTTGTAG+AGG | + | tig0032336:797-816 | Msa1448800:exon | 40.0% | |
| AACTTCATATTGACCGTGAC+TGG | + | tig0032336:848-867 | Msa1448800:CDS | 40.0% | |
| ! | GTTTGGCTATTGTGGGTTAT+GGG | + | tig0032336:870-889 | Msa1448800:CDS | 40.0% |
| GTGCTCTAATTCAATTTGGG+CGG | + | tig0032336:984-1003 | Msa1448800:CDS | 40.0% | |
| TTGACAAATTGCCTAAGGCT+TGG | + | tig0032336:1044-1063 | Msa1448800:CDS | 40.0% | |
| !!! | TGCTCTTTTCCTGCCATTTT+TGG | + | tig0032336:1080-1099 | Msa1448800:intron | 40.0% |
| !!! | GCTCTTTTCCTGCCATTTTT+GGG | + | tig0032336:1081-1100 | Msa1448800:intron | 40.0% |
| !!! | CTCTTTTCCTGCCATTTTTG+GGG | + | tig0032336:1082-1101 | Msa1448800:intron | 40.0% |
| TTACACCGTTTAACCCTTAC+GGG | - | tig0032336:1479-1498 | None:intergenic | 40.0% | |
| GTTACACCGTTTAACCCTTA+CGG | - | tig0032336:1480-1499 | None:intergenic | 40.0% | |
| ! | TAAAGTGAGACAGTACTGGA+TGG | - | tig0032336:1999-2018 | None:intergenic | 40.0% |
| TTGCATGTTTCATGTTTGGC+AGG | + | tig0032336:2020-2039 | Msa1448800:intron | 40.0% | |
| ATACAAAGGGAGAGTGAAAG+AGG | - | tig0032336:2230-2249 | None:intergenic | 40.0% | |
| TTTAGTGGCACTGTTGATCT+TGG | + | tig0032336:2332-2351 | Msa1448800:CDS | 40.0% | |
| ATGGGTTTCTCAGAGAGAAT+TGG | + | tig0032336:2536-2555 | Msa1448800:CDS | 40.0% | |
| TGGGTTTCTCAGAGAGAATT+GGG | + | tig0032336:2537-2556 | Msa1448800:CDS | 40.0% | |
| TCTTGGGATTGTCATCTTTG+AGG | + | tig0032336:2579-2598 | Msa1448800:CDS | 40.0% | |
| TGTGTGAAAATGAATGCCCT+AGG | - | tig0032336:2900-2919 | None:intergenic | 40.0% | |
| GGTGTCAATAGCATTAGAGT+AGG | - | tig0032336:2987-3006 | None:intergenic | 40.0% | |
| TCATTCAATAAAGGGCAACC+CGG | + | tig0032336:3013-3032 | Msa1448800:intron | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | - | tig0032336:3080-3099 | None:intergenic | 40.0% | |
| TGTTAACCTTGCATGACCAT+TGG | - | tig0032336:3147-3166 | None:intergenic | 40.0% | |
| TGTCTGGCAACTGGAATTAA+TGG | - | tig0032336:3250-3269 | None:intergenic | 40.0% | |
| ACTATGTGCAACGAAACCTA+TGG | - | tig0032336:3359-3378 | None:intergenic | 40.0% | |
| TCTCTCACTTGTAAATGCTG+TGG | + | tig0032336:3496-3515 | Msa1448800:intron | 40.0% | |
| CTGTGGAAATCATATTGGAG+CGG | + | tig0032336:3513-3532 | Msa1448800:intron | 40.0% | |
| TGTGGAAATCATATTGGAGC+GGG | + | tig0032336:3514-3533 | Msa1448800:intron | 40.0% | |
| GAGTGAATCCCAAAGAATAC+AGG | + | tig0032336:3538-3557 | Msa1448800:intron | 40.0% | |
| AATCCCAAAGAATACAGGGA+AGG | + | tig0032336:3543-3562 | Msa1448800:intron | 40.0% | |
| ! | CGGAGGCTTTTATAGTTGAA+AGG | + | tig0032336:3610-3629 | Msa1448800:intron | 40.0% |
| !! | TGCCATAGGTGTTTTTGTGT+TGG | + | tig0032336:3740-3759 | Msa1448800:intron | 40.0% |
| ! | AAGCAAGAAAGGCTTGTTTC+CGG | - | tig0032336:3811-3830 | None:intergenic | 40.0% |
| TGGGAGTTTCAAAGCAAGAA+AGG | - | tig0032336:3822-3841 | None:intergenic | 40.0% | |
| TTAATCCTAGGAGCTTCGAT+GGG | - | tig0032336:4033-4052 | None:intergenic | 40.0% | |
| TTTAATCCTAGGAGCTTCGA+TGG | - | tig0032336:4034-4053 | None:intergenic | 40.0% | |
| !! | GAAAGCTCGGTTTTAATCCT+AGG | - | tig0032336:4045-4064 | None:intergenic | 40.0% |
| CATTGTCCCTCTATAGCTAT+TGG | - | tig0032336:4421-4440 | None:intergenic | 40.0% | |
| TGAAAAATTGGCCACTAGAG+CGG | - | tig0032336:4539-4558 | None:intergenic | 40.0% | |
| !!! | CTCTCTCCTTTTTTTGATGG+TGG | - | tig0032336:4640-4659 | None:intergenic | 40.0% |
| CACCATCAAAAAAAGGAGAG+AGG | + | tig0032336:4638-4657 | Msa1448800:intron | 40.0% | |
| ! | AAAGGAGAGAGGTATACTTG+GGG | + | tig0032336:4649-4668 | Msa1448800:intron | 40.0% |
| AGGAATGTGTATCGAATTGC+AGG | + | tig0032336:4774-4793 | Msa1448800:intron | 40.0% | |
| TCATCACTATCGTAATCTGC+TGG | - | tig0032336:4844-4863 | None:intergenic | 40.0% | |
| TTAATCCAAGGCAGCAAGTT+CGG | + | tig0032336:4872-4891 | Msa1448800:CDS | 40.0% | |
| CATCATTTCTATTTGGGCGT+TGG | - | tig0032336:4963-4982 | None:intergenic | 40.0% | |
| GCCCAAATAGAAATGATGCA+TGG | + | tig0032336:4965-4984 | Msa1448800:CDS | 40.0% | |
| GAAATGATGCATGGAGTACA+CGG | + | tig0032336:4974-4993 | Msa1448800:CDS | 40.0% | |
| !!! | GATCACTAGCTTTTAAGGGA+GGG | - | tig0032336:5264-5283 | None:intergenic | 40.0% |
| !!! | TGATCACTAGCTTTTAAGGG+AGG | - | tig0032336:5265-5284 | None:intergenic | 40.0% |
| CCCTTAAAAGCTAGTGATCA+AGG | + | tig0032336:5265-5284 | Msa1448800:intron | 40.0% | |
| !! | TGCTCGGTGTAGTATTTAAG+TGG | - | tig0032336:5304-5323 | None:intergenic | 40.0% |
| ATGTACCACACGACTACTAT+GGG | - | tig0032336:5328-5347 | None:intergenic | 40.0% | |
| ATAGTAGTCGTGTGGTACAT+GGG | + | tig0032336:5328-5347 | Msa1448800:intron | 40.0% | |
| GTATGATCATGCTAGGAACT+TGG | - | tig0032336:5367-5386 | None:intergenic | 40.0% | |
| TCTGGTTGTATGATCATGCT+AGG | - | tig0032336:5374-5393 | None:intergenic | 40.0% | |
| TCGCCTCTTACACACATAAA+TGG | + | tig0032336:5711-5730 | Msa1448800:intron | 40.0% | |
| ATACTGCTCCTTGTTCAGTA+TGG | + | tig0032336:6325-6344 | Msa1448800:intron | 40.0% | |
| TACTGCTCCTTGTTCAGTAT+GGG | + | tig0032336:6326-6345 | Msa1448800:intron | 40.0% | |
| TATCAAGCCCATACTGAACA+AGG | - | tig0032336:6336-6355 | None:intergenic | 40.0% | |
| CGATTCTAAGCCATATCACA+TGG | + | tig0032336:6465-6484 | Msa1448800:three_prime_UTR | 40.0% | |
| GTGTACAGCTCTCACTTTAA+AGG | + | tig0032336:6573-6592 | Msa1448800:three_prime_UTR | 40.0% | |
| ! | TCATAACTTAATGTGGGCTG+TGG | + | tig0032336:6662-6681 | Msa1448800:three_prime_UTR | 40.0% |
| ! | CATATTGACCGTGACTGGTT+TGG | + | tig0032336:853-872 | Msa1448800:CDS | 45.0% |
| CACAATAGCCAAACCAGTCA+CGG | - | tig0032336:864-883 | None:intergenic | 45.0% | |
| !! | GTGACTGGTTTGGCTATTGT+GGG | + | tig0032336:863-882 | Msa1448800:CDS | 45.0% |
| ! | GGTTTGGCTATTGTGGGTTA+TGG | + | tig0032336:869-888 | Msa1448800:CDS | 45.0% |
| GGGTTATGGGATCTATTTGC+TGG | + | tig0032336:883-902 | Msa1448800:CDS | 45.0% | |
| ! | ATCTGGCGTTGGAGAAATGT+CGG | - | tig0032336:942-961 | None:intergenic | 45.0% |
| TCCAACGCCAGATATTTCTC+CGG | + | tig0032336:949-968 | Msa1448800:CDS | 45.0% | |
| ! | AGAGACACAGCCAAAAGCAT+CGG | - | tig0032336:1010-1029 | None:intergenic | 45.0% |
| AAGCAAGCATACCAAGCCTT+AGG | - | tig0032336:1058-1077 | None:intergenic | 45.0% | |
| TGATATGCCCCAAAAATGGC+AGG | - | tig0032336:1092-1111 | None:intergenic | 45.0% | |
| TCATGCCCGTAAGGGTTAAA+CGG | + | tig0032336:1471-1490 | Msa1448800:intron | 45.0% | |
| GTTGTATTGGAGCTACGACA+CGG | + | tig0032336:2098-2117 | Msa1448800:CDS | 45.0% | |
| ACTGTTGATCTTGGTAGAGC+TGG | + | tig0032336:2341-2360 | Msa1448800:CDS | 45.0% | |
| CTGTTGATCTTGGTAGAGCT+GGG | + | tig0032336:2342-2361 | Msa1448800:CDS | 45.0% | |
| !! | ATTGTGAGATGGGTTGCTCT+TGG | + | tig0032336:2562-2581 | Msa1448800:CDS | 45.0% |
| !! | TTGTGAGATGGGTTGCTCTT+GGG | + | tig0032336:2563-2582 | Msa1448800:CDS | 45.0% |
| TACTTTCCCTTAGCAGCAAG+CGG | - | tig0032336:2677-2696 | None:intergenic | 45.0% | |
| CAGCCTTCCCTGTATTCTTT+GGG | - | tig0032336:3549-3568 | None:intergenic | 45.0% | |
| TCGTGTTTGAACATTGACGG+AGG | + | tig0032336:3593-3612 | Msa1448800:intron | 45.0% | |
| AGGATACAAGCATGTGCCAT+AGG | + | tig0032336:3726-3745 | Msa1448800:intron | 45.0% | |
| GGTTTCGGTATGATTGAGGA+GGG | - | tig0032336:3790-3809 | None:intergenic | 45.0% | |
| CTCCTCAATCATACCGAAAC+CGG | + | tig0032336:3789-3808 | Msa1448800:intron | 45.0% | |
| TTCCGGTTTCGGTATGATTG+AGG | - | tig0032336:3794-3813 | None:intergenic | 45.0% | |
| ! | GAAAGGCTTGTTTCCGGTTT+CGG | - | tig0032336:3805-3824 | None:intergenic | 45.0% |
| TCTTGATGAGGAGAATGCAC+TGG | + | tig0032336:4111-4130 | Msa1448800:intron | 45.0% | |
| ! | AAGCCTTTTCCCTTTAGGTG+AGG | + | tig0032336:4259-4278 | Msa1448800:intron | 45.0% |
| TCCATACGACCTCACCTAAA+GGG | - | tig0032336:4271-4290 | None:intergenic | 45.0% | |
| ATCCATACGACCTCACCTAA+AGG | - | tig0032336:4272-4291 | None:intergenic | 45.0% | |
| GGGTATTCTCTTGCGTAGTT+TGG | + | tig0032336:4335-4354 | Msa1448800:intron | 45.0% | |
| ! | AGAGAAACCGACAGAAGTAC+CGG | + | tig0032336:4366-4385 | Msa1448800:intron | 45.0% |
| ATTACATCCAGCCTCCTTAC+CGG | - | tig0032336:4388-4407 | None:intergenic | 45.0% | |
| TAGAATTTCAGTCCCTGACC+TGG | + | tig0032336:4500-4519 | Msa1448800:intron | 45.0% | |
| GTATGCCTAAATCCAGGTCA+GGG | - | tig0032336:4515-4534 | None:intergenic | 45.0% | |
| AGTATGCCTAAATCCAGGTC+AGG | - | tig0032336:4516-4535 | None:intergenic | 45.0% | |
| AAGTCACGAGGATATACTCG+TGG | + | tig0032336:4582-4601 | Msa1448800:intron | 45.0% | |
| !! | TGATGGTGGATAATCAGGGT+AGG | - | tig0032336:4626-4645 | None:intergenic | 45.0% |
| ! | AAGGAGAGAGGTATACTTGG+GGG | + | tig0032336:4650-4669 | Msa1448800:intron | 45.0% |
| TGGGGGGTCTAATGTAATGA+AGG | + | tig0032336:4667-4686 | Msa1448800:intron | 45.0% | |
| GCACTATACTTGTGTGAGTG+TGG | + | tig0032336:5121-5140 | Msa1448800:intron | 45.0% | |
| GTGTGAGTGTGGTGTGTATA+TGG | + | tig0032336:5132-5151 | Msa1448800:intron | 45.0% | |
| ! | AACAGGAGCATAAGACAGGA+AGG | - | tig0032336:5170-5189 | None:intergenic | 45.0% |
| ! | CAGAAACAGGAGCATAAGAC+AGG | - | tig0032336:5174-5193 | None:intergenic | 45.0% |
| GGTGTAGTATTTAAGTGGCC+TGG | - | tig0032336:5299-5318 | None:intergenic | 45.0% | |
| CATGTACCACACGACTACTA+TGG | - | tig0032336:5329-5348 | None:intergenic | 45.0% | |
| CATAGTAGTCGTGTGGTACA+TGG | + | tig0032336:5327-5346 | Msa1448800:intron | 45.0% | |
| TTATGTGTGTAAGAGGCGAG+AGG | - | tig0032336:5710-5729 | None:intergenic | 45.0% | |
| GGATGGCTAAACACCTTAAC+CGG | + | tig0032336:6042-6061 | Msa1448800:intron | 45.0% | |
| !!! | CAGCGGCTTTTTTCTTCAGT+TGG | - | tig0032336:6418-6437 | None:intergenic | 45.0% |
| ! | GAGATTACATGATGGTGCAG+CGG | - | tig0032336:6435-6454 | None:intergenic | 45.0% |
| ! | GTGGTCAATGGTGTTGAGAT+TGG | + | tig0032336:6517-6536 | Msa1448800:three_prime_UTR | 45.0% |
| TGGTGTGTTGTAGAGGCTTC+TGG | + | tig0032336:804-823 | Msa1448800:CDS | 50.0% | |
| GGTGTGTTGTAGAGGCTTCT+GGG | + | tig0032336:805-824 | Msa1448800:CDS | 50.0% | |
| !! | CGTGACTGGTTTGGCTATTG+TGG | + | tig0032336:862-881 | Msa1448800:CDS | 50.0% |
| ! | TCTGGCGTTGGAGAAATGTC+GGG | - | tig0032336:941-960 | None:intergenic | 50.0% |
| ACCGGAGAAATATCTGGCGT+TGG | - | tig0032336:953-972 | None:intergenic | 50.0% | |
| CCAGATATTTCTCCGGTCAG+CGG | + | tig0032336:956-975 | Msa1448800:CDS | 50.0% | |
| ! | TGGATTTGGTCATGCCCGTA+AGG | + | tig0032336:1462-1481 | Msa1448800:intron | 50.0% |
| ! | GGATTTGGTCATGCCCGTAA+GGG | + | tig0032336:1463-1482 | Msa1448800:intron | 50.0% |
| ATTGGAGCTACGACACGGAA+TGG | + | tig0032336:2103-2122 | Msa1448800:CDS | 50.0% | |
| ! | TTTGTCCCGCTTGCTGCTAA+GGG | + | tig0032336:2668-2687 | Msa1448800:intron | 50.0% |
| ACTTTCCCTTAGCAGCAAGC+GGG | - | tig0032336:2676-2695 | None:intergenic | 50.0% | |
| TACAGTGCTATGCTCGCCAT+AGG | + | tig0032336:3340-3359 | Msa1448800:intron | 50.0% | |
| CCAGCCTTCCCTGTATTCTT+TGG | - | tig0032336:3550-3569 | None:intergenic | 50.0% | |
| CCAAAGAATACAGGGAAGGC+TGG | + | tig0032336:3547-3566 | Msa1448800:intron | 50.0% | |
| AGAATACAGGGAAGGCTGGA+AGG | + | tig0032336:3551-3570 | Msa1448800:intron | 50.0% | |
| CGGTTTCGGTATGATTGAGG+AGG | - | tig0032336:3791-3810 | None:intergenic | 50.0% | |
| ATGTACCCATCGAAGCTCCT+AGG | + | tig0032336:4025-4044 | Msa1448800:intron | 50.0% | |
| CGACCTCACCTAAAGGGAAA+AGG | - | tig0032336:4265-4284 | None:intergenic | 50.0% | |
| TCCCTTTAGGTGAGGTCGTA+TGG | + | tig0032336:4267-4286 | Msa1448800:intron | 50.0% | |
| !! | AACCGACAGAAGTACCGGTA+AGG | + | tig0032336:4371-4390 | Msa1448800:intron | 50.0% |
| CTCCTTACCGGTACTTCTGT+CGG | - | tig0032336:4376-4395 | None:intergenic | 50.0% | |
| GGTAAGGAGGCTGGATGTAA+TGG | + | tig0032336:4387-4406 | Msa1448800:intron | 50.0% | |
| TCAGTCCCTGACCTGGATTT+AGG | + | tig0032336:4507-4526 | Msa1448800:intron | 50.0% | |
| AGCGGAGTATGCCTAAATCC+AGG | - | tig0032336:4521-4540 | None:intergenic | 50.0% | |
| TTAGGCATACTCCGCTCTAG+TGG | + | tig0032336:4525-4544 | Msa1448800:intron | 50.0% | |
| GGTAGGCAGGGAGAAAAACT+AGG | - | tig0032336:4609-4628 | None:intergenic | 50.0% | |
| GTGGATAATCAGGGTAGGCA+GGG | - | tig0032336:4621-4640 | None:intergenic | 50.0% | |
| ! | AGGAGAGAGGTATACTTGGG+GGG | + | tig0032336:4651-4670 | Msa1448800:intron | 50.0% |
| CATCAGGGTTACCAGTTGCT+GGG | + | tig0032336:4929-4948 | Msa1448800:CDS | 50.0% | |
| GTTACCAGTTGCTGGGACAA+CGG | + | tig0032336:4936-4955 | Msa1448800:CDS | 50.0% | |
| ATGCATGGAGTACACGGATG+AGG | + | tig0032336:4980-4999 | Msa1448800:CDS | 50.0% | |
| TGCATGGAGTACACGGATGA+GGG | + | tig0032336:4981-5000 | Msa1448800:CDS | 50.0% | |
| CACGACTACTATGGGATGCT+CGG | - | tig0032336:5320-5339 | None:intergenic | 50.0% | |
| AGCATCCCATAGTAGTCGTG+TGG | + | tig0032336:5320-5339 | Msa1448800:intron | 50.0% | |
| TTGCTGGAACCTTTGCGACT+CGG | - | tig0032336:6383-6402 | None:intergenic | 50.0% | |
| ! | TTGGCTGTGAGTTTGCTTGC+TGG | - | tig0032336:6399-6418 | None:intergenic | 50.0% |
| CCGCTGACCGGAGAAATATC+TGG | - | tig0032336:959-978 | None:intergenic | 55.0% | |
| ! | AGAGCACTATCACCGCTGAC+CGG | - | tig0032336:971-990 | None:intergenic | 55.0% |
| ! | ATTTGGGCGGCCGATGCTTT+TGG | + | tig0032336:997-1016 | Msa1448800:CDS | 55.0% |
| ! | CTTTGTCCCGCTTGCTGCTA+AGG | + | tig0032336:2667-2686 | Msa1448800:intron | 55.0% |
| ACTAGAGCTCCCGCATATGC+AGG | + | tig0032336:3039-3058 | Msa1448800:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | tig0032336:3040-3059 | Msa1448800:intron | 55.0% | |
| GGCGAGCATAGCACTGTAGT+AGG | - | tig0032336:3338-3357 | None:intergenic | 55.0% | |
| ATACAGGGAAGGCTGGAAGG+TGG | + | tig0032336:3554-3573 | Msa1448800:intron | 55.0% | |
| !! | CGACAGAAGTACCGGTAAGG+AGG | + | tig0032336:4374-4393 | Msa1448800:intron | 55.0% |
| !! | AGAAGTACCGGTAAGGAGGC+TGG | + | tig0032336:4378-4397 | Msa1448800:intron | 55.0% |
| GGTGGATAATCAGGGTAGGC+AGG | - | tig0032336:4622-4641 | None:intergenic | 55.0% | |
| AGACAAGCAGGTCCACCATC+AGG | + | tig0032336:4913-4932 | Msa1448800:CDS | 55.0% | |
| GACAAGCAGGTCCACCATCA+GGG | + | tig0032336:4914-4933 | Msa1448800:CDS | 55.0% | |
| GCAACTGGTAACCCTGATGG+TGG | - | tig0032336:4928-4947 | None:intergenic | 55.0% | |
| CCAGCAACTGGTAACCCTGA+TGG | - | tig0032336:4931-4950 | None:intergenic | 55.0% | |
| CCATCAGGGTTACCAGTTGC+TGG | + | tig0032336:4928-4947 | Msa1448800:CDS | 55.0% | |
| GAGTACACGGATGAGGGAGA+AGG | + | tig0032336:4987-5006 | Msa1448800:CDS | 55.0% | |
| GTGATCAAGGAGGGAGAACC+AGG | + | tig0032336:5278-5297 | Msa1448800:intron | 55.0% | |
| ACAACCCATCCGAGTCGCAA+AGG | + | tig0032336:6371-6390 | Msa1448800:CDS | 55.0% | |
| ! | GGAACCTTTGCGACTCGGAT+GGG | - | tig0032336:6378-6397 | None:intergenic | 55.0% |
| ! | TGGAACCTTTGCGACTCGGA+TGG | - | tig0032336:6379-6398 | None:intergenic | 55.0% |
| TTCCCGGACCCTGCATATGC+GGG | - | tig0032336:3051-3070 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | tig0032336:3052-3071 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | tig0032336:3051-3070 | Msa1448800:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | tig0032336:3052-3071 | Msa1448800:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | tig0032336:3067-3086 | None:intergenic | 60.0% |
| TGGTCCGTTGTCCCAGCAAC+TGG | - | tig0032336:4943-4962 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCGC+CGG | - | tig0032336:3035-3054 | None:intergenic | 65.0% |
| GCTCCCGCATATGCAGGGTC+CGG | + | tig0032336:3045-3064 | Msa1448800:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | tig0032336:3046-3065 | Msa1448800:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | tig0032336:3050-3069 | Msa1448800:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | tig0032336:3065-3084 | Msa1448800:intron | 65.0% | |
| !! | GGCTGCCGAACTTGCTGCCT+TGG | - | tig0032336:4880-4899 | None:intergenic | 65.0% |
| ! | TGCGGGAGCTCTAGTGCGCC+GGG | - | tig0032336:3034-3053 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032336 | gene | 332 | 6822 | 332 | ID=Msa1448800;Name=Msa1448800 |
| tig0032336 | mRNA | 332 | 6822 | 332 | ID=Msa1448800-mRNA-1;Parent=Msa1448800;Name=Msa1448800-mRNA-1;_AED=0.05;_eAED=0.05;_QI=296|1|1|1|0.66|0.57|7|372|289 |
| tig0032336 | exon | 332 | 556 | 332 | ID=Msa1448800-mRNA-1:exon:16629;Parent=Msa1448800-mRNA-1 |
| tig0032336 | exon | 732 | 1065 | 732 | ID=Msa1448800-mRNA-1:exon:16630;Parent=Msa1448800-mRNA-1 |
| tig0032336 | exon | 2042 | 2141 | 2042 | ID=Msa1448800-mRNA-1:exon:16631;Parent=Msa1448800-mRNA-1 |
| tig0032336 | exon | 2324 | 2404 | 2324 | ID=Msa1448800-mRNA-1:exon:16632;Parent=Msa1448800-mRNA-1 |
| tig0032336 | exon | 2496 | 2600 | 2496 | ID=Msa1448800-mRNA-1:exon:16633;Parent=Msa1448800-mRNA-1 |
| tig0032336 | exon | 4796 | 5008 | 4796 | ID=Msa1448800-mRNA-1:exon:16634;Parent=Msa1448800-mRNA-1 |
| tig0032336 | exon | 6343 | 6822 | 6343 | ID=Msa1448800-mRNA-1:exon:16635;Parent=Msa1448800-mRNA-1 |
| tig0032336 | five_prime_UTR | 332 | 556 | 332 | ID=Msa1448800-mRNA-1:five_prime_utr;Parent=Msa1448800-mRNA-1 |
| tig0032336 | five_prime_UTR | 732 | 802 | 732 | ID=Msa1448800-mRNA-1:five_prime_utr;Parent=Msa1448800-mRNA-1 |
| tig0032336 | CDS | 803 | 1065 | 803 | ID=Msa1448800-mRNA-1:cds;Parent=Msa1448800-mRNA-1 |
| tig0032336 | CDS | 2042 | 2141 | 2042 | ID=Msa1448800-mRNA-1:cds;Parent=Msa1448800-mRNA-1 |
| tig0032336 | CDS | 2324 | 2404 | 2324 | ID=Msa1448800-mRNA-1:cds;Parent=Msa1448800-mRNA-1 |
| tig0032336 | CDS | 2496 | 2600 | 2496 | ID=Msa1448800-mRNA-1:cds;Parent=Msa1448800-mRNA-1 |
| tig0032336 | CDS | 4796 | 5008 | 4796 | ID=Msa1448800-mRNA-1:cds;Parent=Msa1448800-mRNA-1 |
| tig0032336 | CDS | 6343 | 6450 | 6343 | ID=Msa1448800-mRNA-1:cds;Parent=Msa1448800-mRNA-1 |
| tig0032336 | three_prime_UTR | 6451 | 6822 | 6451 | ID=Msa1448800-mRNA-1:three_prime_utr;Parent=Msa1448800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
