AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1450180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450180 MtrunA17_Chr3g0138411 95.357 1206 44 1 1 1194 1 1206 0.0 2395
Msa1450180 MtrunA17_Chr3g0133461 68.891 1064 236 15 214 1194 292 1343 0.0 1434
Msa1450180 MtrunA17_Chr3g0133461 37.671 438 184 10 69 449 16 421 1.46e-57 218
Msa1450180 MtrunA17_Chr5g0438991 66.024 986 209 12 228 1178 64 958 0.0 1273
Msa1450180 MtrunA17_Chr6g0456861 70.552 815 173 10 376 1187 22 772 0.0 1168
Msa1450180 MtrunA17_Chr4g0000031 48.039 816 391 10 391 1186 893 1695 0.0 787
Msa1450180 MtrunA17_Chr6g0456851 48.189 911 369 21 15 901 2 833 0.0 765
Msa1450180 MtrunA17_Chr6g0456851 62.667 75 28 0 943 1017 807 881 1.29e-20 98.6
Msa1450180 MtrunA17_Chr6g0456931 72.385 239 66 0 610 848 1 239 5.98e-124 381
Msa1450180 MtrunA17_Chr5g0401991 58.781 279 53 6 839 1113 1 221 4.14e-91 292
Msa1450180 MtrunA17_Chr5g0402001 91.089 101 9 0 688 788 1 101 5.35e-59 197
Msa1450180 MtrunA17_Chr1g0169961 68.696 115 35 1 383 497 55 168 4.55e-46 163
Msa1450180 MtrunA17_Chr5g0439001 68.687 99 26 2 790 888 1 94 1.09e-36 134
Msa1450180 MtrunA17_Chr6g0456921 49.057 159 21 6 688 844 1 101 5.83e-32 128
Msa1450180 MtrunA17_Chr6g0456911 78.182 55 12 0 955 1009 6 60 3.72e-23 94.4
Msa1450180 MtrunA17_Chr0c02g0489811 77.193 57 13 0 953 1009 5 61 8.03e-23 93.6
Msa1450180 MtrunA17_Chr7g0229221 73.684 57 15 0 953 1009 5 61 1.83e-21 89.7
Msa1450180 MtrunA17_Chr0c02g0489721 78.723 47 10 0 883 929 1 47 8.97e-21 86.7
Msa1450180 MtrunA17_Chr7g0229231 78.723 47 10 0 883 929 1 47 8.97e-21 86.7
Msa1450180 MtrunA17_Chr0c02g0489731 70.175 57 17 0 953 1009 5 61 5.51e-20 85.5
Msa1450180 MtrunA17_Chr0c02g0489821 80.000 45 9 0 885 929 1 45 7.30e-20 84.0
Msa1450180 MtrunA17_Chr6g0456781 50.704 71 27 2 469 539 25 87 1.38e-13 69.3
Msa1450180 MtrunA17_Chr5g0402011 90.323 31 3 0 534 564 21 51 1.66e-13 67.0
Msa1450180 MtrunA17_Chr5g0401281 40.741 81 46 2 1107 1186 279 358 4.37e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450180 AT1G79000.1 46.420 866 420 12 351 1186 832 1683 0.0 801
Msa1450180 AT1G79000.3 46.420 866 420 12 351 1186 808 1659 0.0 800
Msa1450180 AT1G79000.2 46.420 866 420 12 351 1186 832 1683 0.0 800
Msa1450180 AT1G16710.3 47.741 819 393 10 388 1186 863 1666 0.0 785
Msa1450180 AT1G16710.10 47.741 819 393 10 388 1186 863 1666 0.0 785
Msa1450180 AT1G16710.8 47.741 819 393 10 388 1186 863 1666 0.0 785
Msa1450180 AT1G16710.7 47.741 819 393 10 388 1186 863 1666 0.0 785
Msa1450180 AT1G16710.2 47.741 819 393 10 388 1186 860 1663 0.0 784
Msa1450180 AT1G16710.6 47.741 819 393 10 388 1186 824 1627 0.0 784
Msa1450180 AT1G16710.4 47.741 819 393 10 388 1186 824 1627 0.0 784
Msa1450180 AT1G16710.1 47.741 819 393 10 388 1186 889 1692 0.0 784
Msa1450180 AT1G16710.5 47.741 819 393 10 388 1186 824 1627 0.0 784
Msa1450180 AT3G12980.1 46.903 791 385 12 413 1186 883 1655 0.0 754
Msa1450180 AT3G12980.2 46.903 791 385 12 413 1186 802 1574 0.0 753
Msa1450180 AT1G55970.1 43.056 792 422 10 413 1186 677 1457 0.0 663
Msa1450180 AT1G55970.2 43.434 792 405 12 413 1186 677 1443 0.0 659
Msa1450180 AT1G67220.1 42.072 782 400 20 415 1167 604 1361 0.0 612
Msa1450180 AT1G16710.9 50.089 561 266 5 388 939 863 1418 0.0 579
Msa1450180 AT5G67480.1 42.308 78 43 2 1105 1180 271 348 4.90e-12 69.7
Msa1450180 AT5G67480.3 42.308 78 43 2 1105 1180 271 348 4.90e-12 69.7
Msa1450180 AT5G67480.2 42.308 78 43 2 1105 1180 282 359 5.27e-12 69.7

Find 243 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGCCTCAATTATTGTATT+TGG 0.083119 tig0032806:-25024 None:intergenic
TTCTTTGTTCCTACTGAAAA+AGG 0.108559 tig0032806:+27138 Msa1450180:CDS
CTGAACTTGGTGGGAATATT+TGG 0.140434 tig0032806:+23370 Msa1450180:CDS
TTACCAAAAGCTGCTAATTT+TGG 0.160765 tig0032806:+25997 Msa1450180:CDS
TCAACACCACTATGTCAATT+TGG 0.177074 tig0032806:+28337 Msa1450180:CDS
GAAAGTGAATAAGCTGTTTC+TGG 0.192097 tig0032806:+26299 Msa1450180:CDS
GGCAGGTCATGAACAATAAA+AGG 0.212094 tig0032806:-23986 None:intergenic
CACTGAATGCAAGAAATTTC+AGG 0.225944 tig0032806:+27672 Msa1450180:CDS
CAGCCTCAATTATTGTATTT+GGG 0.232255 tig0032806:-25023 None:intergenic
CCCTGGTAGGCAATATCTTT+TGG 0.238306 tig0032806:-27570 None:intergenic
CCAGAGTAGGGTTGTTTAAA+TGG 0.239132 tig0032806:-28144 None:intergenic
TCCTCTGCTTAACTTCTTAC+AGG 0.257556 tig0032806:-22840 None:intergenic
AGAGTGGATTATTTGAAAAT+AGG 0.257666 tig0032806:+28035 Msa1450180:CDS
TGACGGTTGTATGTCATTTC+GGG 0.258908 tig0032806:-23516 None:intergenic
TTCCGAGTCTTTGCAATTCC+TGG 0.259668 tig0032806:-28656 None:intergenic
AACTCATAGACTCGTTATTC+TGG 0.278374 tig0032806:-24363 None:intergenic
GTGACGGTTGTATGTCATTT+CGG 0.290972 tig0032806:-23517 None:intergenic
TTTGAGTCAACTTGTGTTCA+TGG 0.292920 tig0032806:-28288 None:intergenic
GTCAAAACAGAGAGATTGTT+TGG 0.293545 tig0032806:+24333 Msa1450180:CDS
ATGGTCTTTAAAGCTCTATT+TGG 0.306293 tig0032806:-27294 None:intergenic
CTACAACAACAAAAGAGATT+TGG 0.312602 tig0032806:+25906 Msa1450180:CDS
ACAACTGATGAAGAATTTCT+TGG 0.316401 tig0032806:-23402 None:intergenic
GCACCAAAATTAGCAGCTTT+TGG 0.316485 tig0032806:-26000 None:intergenic
CTTTGTTTACCATGAGATAT+TGG 0.319700 tig0032806:+26653 Msa1450180:CDS
TCTGATGCCGCTGGTTATTA+TGG 0.320032 tig0032806:+23938 Msa1450180:CDS
ATATCCGCTGAAACAAGTTT+AGG 0.321167 tig0032806:-24439 None:intergenic
ACTTGTTTCAGCGGATATTT+CGG 0.322049 tig0032806:+24444 Msa1450180:CDS
CCACTCTTTGTTCTTCTCTC+AGG 0.324213 tig0032806:-26615 None:intergenic
TCTCGTTTGCCATACTTTGA+TGG 0.326312 tig0032806:+27180 Msa1450180:CDS
TTGCATCACCAGAATGTCTT+TGG 0.327789 tig0032806:-27346 None:intergenic
GTTTCTCAACTTGCTACATA+TGG 0.336552 tig0032806:+26795 Msa1450180:CDS
CATTTGCTCTGCTTGCTATA+AGG 0.336680 tig0032806:+28249 Msa1450180:CDS
CACGAGTTCATGCTTAGAAT+TGG 0.340621 tig0032806:+24489 Msa1450180:CDS
CGCATTCGGAGCCGAACTCC+TGG 0.358494 tig0032806:-26533 None:intergenic
GGGTCAGATAGTCTCCCTTC+TGG 0.359944 tig0032806:-23965 None:intergenic
GGAATGTACGCCCAGGAGTT+CGG 0.366380 tig0032806:+26522 Msa1450180:CDS
TCTTTGGCAGTGTCTTTAGA+AGG 0.367904 tig0032806:-27330 None:intergenic
CAACACCACTATGTCAATTT+GGG 0.370714 tig0032806:+28338 Msa1450180:CDS
CTTGCGAAGGGTTCTGAACT+TGG 0.374398 tig0032806:+23357 Msa1450180:CDS
CAAACTGAAATTGATACTTC+TGG 0.380328 tig0032806:-28078 None:intergenic
ATGTGTACACAACGCTGATT+TGG 0.380704 tig0032806:-26561 None:intergenic
AGACACTGCCAAAGACATTC+TGG 0.381560 tig0032806:+27338 Msa1450180:CDS
ACTGAAGAAAATATTATTGT+TGG 0.383324 tig0032806:+27093 Msa1450180:CDS
TGCTTAGAATTGGAAGATAC+AGG 0.390600 tig0032806:+24499 Msa1450180:CDS
CATGTTGTGGCGTACGCATC+AGG 0.393034 tig0032806:+25585 Msa1450180:CDS
TCTTGATCTATAAGAGAATT+CGG 0.393830 tig0032806:-26349 None:intergenic
TGCCATGAAGTGATAGCATC+TGG 0.393848 tig0032806:+27634 Msa1450180:CDS
GGCAGTGTCTTTAGAAGGAT+TGG 0.396884 tig0032806:-27325 None:intergenic
TATCCGCTGAAACAAGTTTA+GGG 0.397186 tig0032806:-24438 None:intergenic
CTTCTGTTTCAGCAGATTGA+AGG 0.398990 tig0032806:+26480 Msa1450180:CDS
CTGATTTGGATTGCCGCATT+CGG 0.399351 tig0032806:-26547 None:intergenic
AAAATAGTTGCTACTTGATC+TGG 0.400825 tig0032806:-24110 None:intergenic
GGTGCAAAATTCGAGTAAAT+CGG 0.403532 tig0032806:+28587 Msa1450180:CDS
TCCCAGATGCTATCACTTCA+TGG 0.404024 tig0032806:-27636 None:intergenic
GGTGGGAAAATTACGTTCAA+TGG 0.410274 tig0032806:+25686 Msa1450180:CDS
GAGGACATACAAGGCAGAAC+TGG 0.410877 tig0032806:+24844 Msa1450180:CDS
CGTAACTTACCCGTTTCATA+TGG 0.413182 tig0032806:+24064 Msa1450180:CDS
CTGCCTTGCTCTCCTGATGA+TGG 0.413683 tig0032806:+24004 Msa1450180:CDS
AATGTAGAATACCACGTTGC+AGG 0.414844 tig0032806:+28677 Msa1450180:CDS
TTCATATGGTGGAAGCAATC+TGG 0.416270 tig0032806:+24078 Msa1450180:CDS
TCTGAGAAAGGAATCTGTTC+AGG 0.416816 tig0032806:+25098 Msa1450180:CDS
GTGGGAAAATTACGTTCAAT+GGG 0.418220 tig0032806:+25687 Msa1450180:CDS
CAGTAGTCTCCATCAAAGTA+TGG 0.418646 tig0032806:-27189 None:intergenic
CCCTCGAAAGGCTTAGAATC+TGG 0.419221 tig0032806:+24739 Msa1450180:CDS
TCAAAACAGAGAGATTGTTT+GGG 0.419623 tig0032806:+24334 Msa1450180:CDS
GCCTGTGCTCCTTCAAGAAA+AGG 0.420899 tig0032806:+26818 Msa1450180:CDS
CATGGTTCTTGGCAAGTCCT+TGG 0.422145 tig0032806:-26022 None:intergenic
AAGCAACGCATTCCGAATCT+TGG 0.427714 tig0032806:+28907 Msa1450180:CDS
GTGCAAAATTCGAGTAAATC+GGG 0.429183 tig0032806:+28588 Msa1450180:CDS
ATGTAAATCTTCAAATTGAA+TGG 0.432375 tig0032806:-24407 None:intergenic
CGGCGTAGCTTATCATTCTT+CGG 0.442591 tig0032806:-26884 None:intergenic
TATCCCATCCTGGTTGAATC+CGG 0.446469 tig0032806:-24944 None:intergenic
TGGTCACTGAGCATGGTTCT+TGG 0.450291 tig0032806:-26033 None:intergenic
TGCAGCTCCACGCCAAGATT+CGG 0.450882 tig0032806:-28919 None:intergenic
ACAATATATTTCAAAAGTGC+TGG 0.451731 tig0032806:+28200 Msa1450180:CDS
AAATGTGTGCATCAGAACTA+TGG 0.452913 tig0032806:-27843 None:intergenic
GTCTTTGCAATTCCTGGAGT+GGG 0.453840 tig0032806:-28650 None:intergenic
GGAAGAAGAATTTGATGCAC+AGG 0.454851 tig0032806:+25628 Msa1450180:CDS
CCTGTGCTCCTTCAAGAAAA+GGG 0.454880 tig0032806:+26819 Msa1450180:CDS
CAGTTAGAGACTATCGAGTC+TGG 0.455443 tig0032806:+24709 Msa1450180:CDS
GCAGAGCAAATGGTACATTC+TGG 0.456546 tig0032806:-28238 None:intergenic
AAATGACATACAACCGTCAC+TGG 0.459682 tig0032806:+23520 Msa1450180:CDS
AACAACAGCGTCAGCGATAC+AGG 0.459884 tig0032806:+22896 Msa1450180:five_prime_UTR
TTCTTGATTTGAGAACAGTT+TGG 0.463384 tig0032806:-28544 None:intergenic
CACACACATATCAGCAAGTA+GGG 0.463928 tig0032806:-24038 None:intergenic
TTCTAAGTGGTCACTGAGCA+TGG 0.465266 tig0032806:-26040 None:intergenic
CTACTGGTGTGGTTATGTTA+TGG 0.465543 tig0032806:+27206 Msa1450180:CDS
TGTTCTGAAAATCCAACTCC+TGG 0.467769 tig0032806:-24534 None:intergenic
GTAGTAATAATTCCAGCATA+GGG 0.468557 tig0032806:-23692 None:intergenic
ATGGACTTTCCCATTGAAGT+AGG 0.469146 tig0032806:-24388 None:intergenic
ACTTACCACTGCTGCTTCAA+AGG 0.469361 tig0032806:+23713 Msa1450180:CDS
CATCATCAGGAGAGCAAGGC+AGG 0.473198 tig0032806:-24003 None:intergenic
TGAGCAATTTGCCCCTATGC+TGG 0.473268 tig0032806:+23680 Msa1450180:CDS
TAGGGTTGTTTAAATGGTAG+AGG 0.474232 tig0032806:-28138 None:intergenic
AACCCTACTCTGGTGACTGT+TGG 0.474451 tig0032806:+28154 Msa1450180:CDS
GATGCACACATTTCAAAGAA+TGG 0.475962 tig0032806:+27853 Msa1450180:CDS
ATCATTATGCTTAGTGTTGG+AGG 0.477828 tig0032806:-28002 None:intergenic
GAAATACAGCAGAAACTCAA+TGG 0.479828 tig0032806:+24765 Msa1450180:CDS
GCGAAATAAACCCCAGGAGT+TGG 0.480620 tig0032806:+24522 Msa1450180:CDS
GAGGACATTCAAGGCAGAAC+CGG 0.485084 tig0032806:+24925 Msa1450180:CDS
TTATGGAAGAGAGAGCAAAC+TGG 0.486815 tig0032806:+26082 Msa1450180:CDS
TTTCTCAACTTGCTACATAT+GGG 0.487718 tig0032806:+26796 Msa1450180:CDS
TACGCTGATTCAACGTCTCC+AGG 0.490165 tig0032806:-23889 None:intergenic
GATATCATTATGCTTAGTGT+TGG 0.494216 tig0032806:-28005 None:intergenic
GCCAAAAGATATTGCCTACC+AGG 0.497791 tig0032806:+27569 Msa1450180:CDS
CGAGGTGCATACACTATGTC+AGG 0.500355 tig0032806:+27876 Msa1450180:CDS
GATCTATAAGAGAATTCGGC+AGG 0.501906 tig0032806:-26345 None:intergenic
CGCTGACGCTGTTGTTGTTG+TGG 0.502880 tig0032806:-22889 None:intergenic
CTTATAGCAAGCAGAGCAAA+TGG 0.504219 tig0032806:-28248 None:intergenic
AGAACTGGATTCATCCAGGC+GGG 0.506173 tig0032806:+24859 Msa1450180:CDS
TCGTGAGTCAAATGAGAAAA+CGG 0.506997 tig0032806:+28363 Msa1450180:CDS
TTATACTAACTGCCCACTCC+AGG 0.508191 tig0032806:+28638 Msa1450180:CDS
CACGCAGATGCTGAAACTGC+TGG 0.511708 tig0032806:+28465 Msa1450180:intron
AGAACTTATTATTGTTCATG+AGG 0.512614 tig0032806:+24897 Msa1450180:CDS
GGGGTTGATGAACCATCATC+AGG 0.513452 tig0032806:-24016 None:intergenic
CGAAGGGTTCTGAACTTGGT+GGG 0.514839 tig0032806:+23361 Msa1450180:CDS
AGTAGTAATAATTCCAGCAT+AGG 0.515149 tig0032806:-23693 None:intergenic
GTTATAAGAATTCTAAAGGT+GGG 0.515230 tig0032806:+25669 Msa1450180:CDS
GGTTATTATGGCGTTCCAGA+AGG 0.515241 tig0032806:+23950 Msa1450180:CDS
GCCAGATTCTAAGCCTTTCG+AGG 0.516084 tig0032806:-24740 None:intergenic
GATCATCATTGATGAATACT+TGG 0.516147 tig0032806:-28116 None:intergenic
TTGCTTCCACCATATGAAAC+GGG 0.517072 tig0032806:-24073 None:intergenic
ACATATTAGTAGTCTGAGAA+AGG 0.521580 tig0032806:+25086 Msa1450180:CDS
CAGTCCGTGGAGAATCCTAC+TGG 0.523094 tig0032806:-23483 None:intergenic
ATTGCTTCCACCATATGAAA+CGG 0.523926 tig0032806:-24074 None:intergenic
AGCCTCAATTATTGTATTTG+GGG 0.527381 tig0032806:-25022 None:intergenic
ATCCCCAAATACAATAATTG+AGG 0.528154 tig0032806:+25020 Msa1450180:CDS
CTCCAGGAATTGCAAAGACT+CGG 0.528433 tig0032806:+28654 Msa1450180:CDS
AGAAATTTCAGGAGTGTGAA+AGG 0.528641 tig0032806:+27683 Msa1450180:CDS
TTCCAACAGTCACCAGAGTA+GGG 0.530507 tig0032806:-28156 None:intergenic
GAACTTATTATTGTTCATGA+GGG 0.530986 tig0032806:+24898 Msa1450180:CDS
TGGATTACTTACATGTGGAC+TGG 0.532864 tig0032806:-23463 None:intergenic
GTTTCTAAGTCTGATGCCGC+TGG 0.533231 tig0032806:+23929 Msa1450180:CDS
AACTTACCCGTTTCATATGG+TGG 0.534858 tig0032806:+24067 Msa1450180:CDS
ATTACATCTGAGGAGGAAGC+AGG 0.535806 tig0032806:+25491 Msa1450180:CDS
TTTCCAACAGTCACCAGAGT+AGG 0.537493 tig0032806:-28157 None:intergenic
ACGTGTGAACAAATCAATCA+AGG 0.540321 tig0032806:-25049 None:intergenic
TATTGTTCATGAGGGTGAAG+AGG 0.540740 tig0032806:+24906 Msa1450180:CDS
TCTAAGCATGAACTCGTGCT+AGG 0.543758 tig0032806:-24484 None:intergenic
AATGCAATAAATGCAAAAGA+TGG 0.545817 tig0032806:+25863 Msa1450180:CDS
CCATTTAAACAACCCTACTC+TGG 0.546250 tig0032806:+28144 Msa1450180:CDS
AGTCTTTGCAATTCCTGGAG+TGG 0.547250 tig0032806:-28651 None:intergenic
TCTGCTTGCTATAAGGATAG+AGG 0.547525 tig0032806:+28256 Msa1450180:CDS
TTTCAAATAATCCACTCTCA+AGG 0.548304 tig0032806:-28030 None:intergenic
GCGAAGGGTTCTGAACTTGG+TGG 0.548679 tig0032806:+23360 Msa1450180:CDS
AGAAGGATTGGCATGTCCCA+TGG 0.548735 tig0032806:-27313 None:intergenic
GCACACACATATCAGCAAGT+AGG 0.548931 tig0032806:-24039 None:intergenic
CTTAACTTCTTACAGGAAGG+AGG 0.552557 tig0032806:-22833 None:intergenic
TCAGCGTATGCAAGCTCTAG+TGG 0.552958 tig0032806:+23904 Msa1450180:CDS
GTTCTGAAAATCCAACTCCT+GGG 0.553233 tig0032806:-24533 None:intergenic
AGGGAACGAGAATCTTGATA+AGG 0.553771 tig0032806:+26116 Msa1450180:CDS
GAGGGTGAAGAGGACATTCA+AGG 0.555916 tig0032806:+24916 Msa1450180:CDS
TCAACAGTAGGCCTACTCTC+AGG 0.556868 tig0032806:+24791 Msa1450180:CDS
GTGTGTTATAAGAATTCTAA+AGG 0.558028 tig0032806:+25665 Msa1450180:CDS
TTAAGTTCCTTCCTGAGAGT+AGG 0.559411 tig0032806:-24802 None:intergenic
ACACATGCCAATTATGTCAA+AGG 0.562566 tig0032806:+25525 Msa1450180:CDS
GCATTCGGAGCCGAACTCCT+GGG 0.563589 tig0032806:-26532 None:intergenic
ATTAACACAGATTACATCTG+AGG 0.565214 tig0032806:+25481 Msa1450180:intron
CATACTTTGATGGAGACTAC+TGG 0.567433 tig0032806:+27190 Msa1450180:CDS
TATGGAAGAGAGAGCAAACT+GGG 0.568310 tig0032806:+26083 Msa1450180:CDS
AGCTGAAAAGATGCTTGCGA+AGG 0.568364 tig0032806:+23344 Msa1450180:exon
GCAGGTCATGAACAATAAAA+GGG 0.568506 tig0032806:-23985 None:intergenic
AGATATTGATGACGATGAAG+AGG 0.569424 tig0032806:+24825 Msa1450180:CDS
AGGCAGAACTGGATTCATCC+AGG 0.569909 tig0032806:+24855 Msa1450180:CDS
CTGCTTAACTTCTTACAGGA+AGG 0.573387 tig0032806:-22836 None:intergenic
GTTGCTACTTGATCTGGTGT+TGG 0.574954 tig0032806:-24104 None:intergenic
TTAACTTCTTACAGGAAGGA+GGG 0.576436 tig0032806:-22832 None:intergenic
GAATAAAGAAAGAGACACAA+AGG 0.577472 tig0032806:+22861 Msa1450180:five_prime_UTR
CGATTCCCAAATTGACATAG+TGG 0.580947 tig0032806:-28343 None:intergenic
CCTGAGAGAAGAACAAAGAG+TGG 0.581788 tig0032806:+26615 Msa1450180:CDS
TCATTATGCTTAGTGTTGGA+GGG 0.581798 tig0032806:-28001 None:intergenic
AACTGGATTCATCCAGGCGG+GGG 0.582008 tig0032806:+24861 Msa1450180:CDS
CAAAACAGAGAGATTGTTTG+GGG 0.582814 tig0032806:+24335 Msa1450180:CDS
GAACCGGATTCAACCAGGAT+GGG 0.586122 tig0032806:+24941 Msa1450180:CDS
TAAAGAAAGAGACACAAAGG+AGG 0.586772 tig0032806:+22864 Msa1450180:five_prime_UTR
AGGCAGAACCGGATTCAACC+AGG 0.589059 tig0032806:+24936 Msa1450180:CDS
GAACCATCATCAGGAGAGCA+AGG 0.589504 tig0032806:-24007 None:intergenic
CAGGAGTTCGGCTCCGAATG+CGG 0.589631 tig0032806:+26534 Msa1450180:CDS
TGATAGCATCTGGGAAGCGA+TGG 0.590031 tig0032806:+27644 Msa1450180:CDS
CAGTAGGATTCTCCACGGAC+TGG 0.590312 tig0032806:+23484 Msa1450180:CDS
CCAGATTCTAAGCCTTTCGA+GGG 0.591619 tig0032806:-24739 None:intergenic
GAACAGTTTGGATAAGAGCA+TGG 0.592137 tig0032806:-28532 None:intergenic
CAAACGAGAAGTTGTCACCT+TGG 0.592914 tig0032806:-27166 None:intergenic
AAATAGAGCTTTAAAGACCA+TGG 0.593540 tig0032806:+27296 Msa1450180:CDS
ATTCCCTAAACTTGTTTCAG+CGG 0.593760 tig0032806:+24435 Msa1450180:CDS
GTTATTATGGCGTTCCAGAA+GGG 0.598014 tig0032806:+23951 Msa1450180:CDS
TACAGGGCGAAATAAACCCC+AGG 0.598885 tig0032806:+24516 Msa1450180:CDS
GTTATGTTATGGAAGCAGCC+AGG 0.598981 tig0032806:+27217 Msa1450180:CDS
TACGAAAAGACGGAAAATGA+CGG 0.604361 tig0032806:+24582 Msa1450180:CDS
GAAAGTGTTTCAAAAGAACA+AGG 0.604473 tig0032806:-24673 None:intergenic
CAGCGTATGCAAGCTCTAGT+GGG 0.605184 tig0032806:+23905 Msa1450180:CDS
AATGATATCATCCTTGAGAG+TGG 0.608883 tig0032806:+28019 Msa1450180:CDS
CTGTGCTCCTTCAAGAAAAG+GGG 0.610873 tig0032806:+26820 Msa1450180:CDS
TCTGGAATGATTCCCTCGAA+AGG 0.612821 tig0032806:+24727 Msa1450180:CDS
TGTTATAAGAATTCTAAAGG+TGG 0.613504 tig0032806:+25668 Msa1450180:CDS
TTCTGAAAATCCAACTCCTG+GGG 0.615940 tig0032806:-24532 None:intergenic
GCCATGAAGTGATAGCATCT+GGG 0.616414 tig0032806:+27635 Msa1450180:CDS
GACGATGAAGAGGACATACA+AGG 0.617846 tig0032806:+24835 Msa1450180:CDS
TAACTTCTTACAGGAAGGAG+GGG 0.618021 tig0032806:-22831 None:intergenic
TGATCAATCGACTTACAAGA+AGG 0.618959 tig0032806:+24645 Msa1450180:CDS
AGAACCGGATTCAACCAGGA+TGG 0.619756 tig0032806:+24940 Msa1450180:CDS
AATAGAGCTTTAAAGACCAT+GGG 0.619881 tig0032806:+27297 Msa1450180:CDS
GCTGAAAAGATGCTTGCGAA+GGG 0.620277 tig0032806:+23345 Msa1450180:exon
TGCTACAACCTACGAAAAGA+CGG 0.621114 tig0032806:+24572 Msa1450180:CDS
ATGGTAAACAAAGGTACGAA+GGG 0.622204 tig0032806:-26643 None:intergenic
CCTACTGGATTACTTACATG+TGG 0.622783 tig0032806:-23468 None:intergenic
ACAAACCTTTGAAGCAGCAG+TGG 0.625425 tig0032806:-23718 None:intergenic
GCAGGAGGAATATATGAACC+TGG 0.625899 tig0032806:+23871 Msa1450180:intron
AGAATGATAAGCTACGCCGT+TGG 0.627014 tig0032806:+26888 Msa1450180:CDS
CCAAAAGATATTGCCTACCA+GGG 0.627033 tig0032806:+27570 Msa1450180:CDS
TCCTGTAAGAAGTTAAGCAG+AGG 0.627414 tig0032806:+22839 Msa1450180:five_prime_UTR
CACACATATCAGCAAGTAGG+GGG 0.627930 tig0032806:-24036 None:intergenic
AAAGAAAGAGACACAAAGGA+GGG 0.628127 tig0032806:+22865 Msa1450180:five_prime_UTR
CAATATCTCATGGTAAACAA+AGG 0.628488 tig0032806:-26652 None:intergenic
ACTCAATGGAAATCAACAGT+AGG 0.634159 tig0032806:+24779 Msa1450180:CDS
GCATGGTTCAGCATTAGTTG+CGG 0.636133 tig0032806:-28515 None:intergenic
GGGATGATAACGCCAGTCCG+TGG 0.637062 tig0032806:-23496 None:intergenic
CAGTAGGCCTACTCTCAGGA+AGG 0.640031 tig0032806:+24795 Msa1450180:CDS
AAAGAAATGATCATATACGT+TGG 0.641068 tig0032806:-27121 None:intergenic
CATGGTAAACAAAGGTACGA+AGG 0.641848 tig0032806:-26644 None:intergenic
GTTTCTGGACATCATTCCAG+AGG 0.650501 tig0032806:+26314 Msa1450180:CDS
TCATTGATGAATACTTGGCA+CGG 0.650719 tig0032806:-28111 None:intergenic
TGCAAAATTCGAGTAAATCG+GGG 0.651340 tig0032806:+28589 Msa1450180:CDS
GAAGAAGAATTTGATGCACA+GGG 0.652467 tig0032806:+25629 Msa1450180:CDS
AACACAGATTACATCTGAGG+AGG 0.653744 tig0032806:+25484 Msa1450180:intron
ATCTATAAGAGAATTCGGCA+GGG 0.656485 tig0032806:-26344 None:intergenic
GCTTAGAATTGGAAGATACA+GGG 0.658280 tig0032806:+24500 Msa1450180:CDS
GAACTGGATTCATCCAGGCG+GGG 0.658515 tig0032806:+24860 Msa1450180:CDS
CCACATGTAAGTAATCCAGT+AGG 0.658631 tig0032806:+23468 Msa1450180:CDS
TTTAGAATTCTTATAACACA+CGG 0.658685 tig0032806:-25663 None:intergenic
TAGTAATAATTCCAGCATAG+GGG 0.660364 tig0032806:-23691 None:intergenic
AGCTATTCTCTCATGCTCGT+AGG 0.662256 tig0032806:+28566 Msa1450180:CDS
ACGCATTCCGAATCTTGGCG+TGG 0.671085 tig0032806:+28912 Msa1450180:CDS
TAATCCAGTAGGATTCTCCA+CGG 0.679485 tig0032806:+23479 Msa1450180:CDS
TTTGATGGAGACTACTGGTG+TGG 0.693838 tig0032806:+27195 Msa1450180:CDS
ACACATTTCAAAGAATGGCG+AGG 0.706634 tig0032806:+27858 Msa1450180:CDS
TGGAACGCCATAATAACCAG+CGG 0.726670 tig0032806:-23945 None:intergenic
ACACATATCAGCAAGTAGGG+GGG 0.728095 tig0032806:-24035 None:intergenic
ACACACATATCAGCAAGTAG+GGG 0.734890 tig0032806:-24037 None:intergenic
CAGAACTGGATTCATCCAGG+CGG 0.736162 tig0032806:+24858 Msa1450180:CDS
TGGGAAAATTACGTTCAATG+GGG 0.742909 tig0032806:+25688 Msa1450180:CDS
TTGATGAATACTTGGCACGG+CGG 0.746659 tig0032806:-28108 None:intergenic
ACAGTCACACACCTGCAACG+TGG 0.756031 tig0032806:-28688 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTATTTATATTTTTAGTTTA+GGG - tig0032806:22812-22831 None:intergenic 10.0%
!! CAAAATAAATATAAAGAAAT+AGG - tig0032806:28852-28871 None:intergenic 10.0%
!!! GGTATTTATATTTTTAGTTT+AGG - tig0032806:22813-22832 None:intergenic 15.0%
!! AATTACAATGAATGAAATTA+GGG - tig0032806:22984-23003 None:intergenic 15.0%
!! TAATTTCATTCATTGTAATT+GGG + tig0032806:22984-23003 Msa1450180:intron 15.0%
!!! ATTTATTTGTTAATTCATTC+AGG - tig0032806:23143-23162 None:intergenic 15.0%
!! AATGAATTAACAAATAAATG+CGG + tig0032806:23144-23163 Msa1450180:intron 15.0%
!!! TATTTGTTTATTATTTCTTG+TGG + tig0032806:23295-23314 Msa1450180:intron 15.0%
!! TAAAATTGTTAACTTCTATA+TGG - tig0032806:25462-25481 None:intergenic 15.0%
!! TAAAACATAAATAGAAAGAA+TGG - tig0032806:26728-26747 None:intergenic 15.0%
!!! TATATTTATTTTGATTTTGC+AGG + tig0032806:28859-28878 Msa1450180:intron 15.0%
!!! ATATTTATTTTGATTTTGCA+GGG + tig0032806:28860-28879 Msa1450180:intron 15.0%
!! CAATTACAATGAATGAAATT+AGG - tig0032806:22985-23004 None:intergenic 20.0%
!! CTAATTTCATTCATTGTAAT+TGG + tig0032806:22983-23002 Msa1450180:intron 20.0%
!! ATGAATTAACAAATAAATGC+GGG + tig0032806:23145-23164 Msa1450180:intron 20.0%
!! AATAAACAAATATCAGTTAG+AGG - tig0032806:23287-23306 None:intergenic 20.0%
!! ACGAATAAGGATTAAAAATT+GGG - tig0032806:24186-24205 None:intergenic 20.0%
!! ATGTAAATCTTCAAATTGAA+TGG - tig0032806:24410-24429 None:intergenic 20.0%
!!! TTTAGAATTCTTATAACACA+CGG - tig0032806:25666-25685 None:intergenic 20.0%
!!! CGTTTTTAATTTCTTTTAAG+CGG - tig0032806:25963-25982 None:intergenic 20.0%
!! CGCTTAAAAGAAATTAAAAA+CGG + tig0032806:25961-25980 Msa1450180:CDS 20.0%
!!! CTTTTTAAACTCTATTTCTA+TGG + tig0032806:26683-26702 Msa1450180:intron 20.0%
!! AAAACAAAGAAGATAAAAGA+AGG - tig0032806:26993-27012 None:intergenic 20.0%
!! TTTATATTGTTTGTTTATGC+AGG + tig0032806:27046-27065 Msa1450180:intron 20.0%
!! GTATCTTTCTATGATAAAAA+AGG + tig0032806:27068-27087 Msa1450180:CDS 20.0%
!! ACTGAAGAAAATATTATTGT+TGG + tig0032806:27093-27112 Msa1450180:CDS 20.0%
!! ATAAAAGAATATATCCCATT+GGG - tig0032806:27425-27444 None:intergenic 20.0%
!! TATAAAAGAATATATCCCAT+TGG - tig0032806:27426-27445 None:intergenic 20.0%
!! ATCATGTAAATAACTTAAAC+TGG - tig0032806:27487-27506 None:intergenic 20.0%
!! AAGTATGTATTCATTTCAAA+GGG - tig0032806:27752-27771 None:intergenic 20.0%
! AATGAATGAAATTAGGGTTA+GGG - tig0032806:22978-22997 None:intergenic 25.0%
! GATAAACGATGAATTGATTA+AGG - tig0032806:23030-23049 None:intergenic 25.0%
! AATTCATCGTTTATCAATGT+CGG + tig0032806:23035-23054 Msa1450180:intron 25.0%
! GGTTAAGAATGTGAATTAAA+TGG - tig0032806:23122-23141 None:intergenic 25.0%
!! TTATCAAAACATCTCTTTTG+CGG - tig0032806:23438-23457 None:intergenic 25.0%
! CGAATAAGGATTAAAAATTG+GGG - tig0032806:24185-24204 None:intergenic 25.0%
! CACGAATAAGGATTAAAAAT+TGG - tig0032806:24187-24206 None:intergenic 25.0%
! GCATAAGTAGCAAATTAAAT+GGG - tig0032806:24298-24317 None:intergenic 25.0%
! TGCATAAGTAGCAAATTAAA+TGG - tig0032806:24299-24318 None:intergenic 25.0%
! AGAACTTATTATTGTTCATG+AGG + tig0032806:24897-24916 Msa1450180:CDS 25.0%
! GAACTTATTATTGTTCATGA+GGG + tig0032806:24898-24917 Msa1450180:CDS 25.0%
!! ATGGTTCTTCTTTTAATCAT+TGG + tig0032806:25238-25257 Msa1450180:intron 25.0%
! TTCTTCCTTTCTACAAAAAT+AGG - tig0032806:25615-25634 None:intergenic 25.0%
! GTGTGTTATAAGAATTCTAA+AGG + tig0032806:25665-25684 Msa1450180:CDS 25.0%
!! TGTTATAAGAATTCTAAAGG+TGG + tig0032806:25668-25687 Msa1450180:CDS 25.0%
!! GTTATAAGAATTCTAAAGGT+GGG + tig0032806:25669-25688 Msa1450180:CDS 25.0%
! TAATCGATATTGAAACTTAC+AGG - tig0032806:25770-25789 None:intergenic 25.0%
! AATGCAATAAATGCAAAAGA+TGG + tig0032806:25863-25882 Msa1450180:CDS 25.0%
!!! CAAAAAGTCTTTTTTCTAAG+TGG - tig0032806:26056-26075 None:intergenic 25.0%
!! TACAATTTTGCAGAAATTCA+AGG - tig0032806:26222-26241 None:intergenic 25.0%
! TTGAATTTCTGCAAAATTGT+AGG + tig0032806:26221-26240 Msa1450180:intron 25.0%
! TCTTGATCTATAAGAGAATT+CGG - tig0032806:26352-26371 None:intergenic 25.0%
!! TCTATTATGTCTGTATTTTC+AGG + tig0032806:26452-26471 Msa1450180:intron 25.0%
!! TTGATTCTGTCAAGTATTTT+AGG + tig0032806:26592-26611 Msa1450180:CDS 25.0%
! AGAAAAATACCAATATCTCA+TGG - tig0032806:26665-26684 None:intergenic 25.0%
!! ACCTTGATTTTTGTAAGAAA+CGG + tig0032806:26771-26790 Msa1450180:CDS 25.0%
! CAAACAATATAAAGATTCAG+TGG - tig0032806:27039-27058 None:intergenic 25.0%
! AAAGAAATGATCATATACGT+TGG - tig0032806:27124-27143 None:intergenic 25.0%
! CAAGTATGTATTCATTTCAA+AGG - tig0032806:27753-27772 None:intergenic 25.0%
! AAATGAATACATACTTGAAC+TGG + tig0032806:27756-27775 Msa1450180:intron 25.0%
! GAAAATCATATGAAAACTTC+AGG - tig0032806:27914-27933 None:intergenic 25.0%
! AGTAATTTCATGCAAAACAT+TGG + tig0032806:27942-27961 Msa1450180:intron 25.0%
!!! AGAGTGGATTATTTGAAAAT+AGG + tig0032806:28035-28054 Msa1450180:CDS 25.0%
!! ACAATATATTTCAAAAGTGC+TGG + tig0032806:28200-28219 Msa1450180:CDS 25.0%
! CAAATTCTCTCAAATTCTAT+AGG - tig0032806:28729-28748 None:intergenic 25.0%
! CTATAGAATTTGAGAGAATT+TGG + tig0032806:28727-28746 Msa1450180:intron 25.0%
!!! CTCCTTTCTGATTTATTTTT+TGG + tig0032806:28755-28774 Msa1450180:intron 25.0%
! AGCCAAAAAATAAATCAGAA+AGG - tig0032806:28760-28779 None:intergenic 25.0%
! AAAAAAATGACTGTTGTGAA+AGG - tig0032806:28807-28826 None:intergenic 25.0%
! TCATCAAAGCTTACAAAAAT+TGG - tig0032806:29075-29094 None:intergenic 25.0%
GAATAAAGAAAGAGACACAA+AGG + tig0032806:22861-22880 Msa1450180:five_prime_UTR 30.0%
CAATGAATGAAATTAGGGTT+AGG - tig0032806:22979-22998 None:intergenic 30.0%
! AATCATGTTTTCCCTCTTTA+TGG + tig0032806:23235-23254 Msa1450180:intron 30.0%
ACAACTGATGAAGAATTTCT+TGG - tig0032806:23405-23424 None:intergenic 30.0%
! TTCTTTTTCTTATCCAGTGA+CGG - tig0032806:23536-23555 None:intergenic 30.0%
CTGGATAAGAAAAAGAATGT+AGG + tig0032806:23539-23558 Msa1450180:intron 30.0%
TAGTAATAATTCCAGCATAG+GGG - tig0032806:23694-23713 None:intergenic 30.0%
GTAGTAATAATTCCAGCATA+GGG - tig0032806:23695-23714 None:intergenic 30.0%
AGTAGTAATAATTCCAGCAT+AGG - tig0032806:23696-23715 None:intergenic 30.0%
!!! CAGTTGTTTTTCTACGAATT+TGG + tig0032806:23849-23868 Msa1450180:intron 30.0%
! AAAATAGTTGCTACTTGATC+TGG - tig0032806:24113-24132 None:intergenic 30.0%
TCATTATTTGCGTGTTTCAA+AGG - tig0032806:24136-24155 None:intergenic 30.0%
AAATCAATGTTGCACGAATA+AGG - tig0032806:24199-24218 None:intergenic 30.0%
!! TTAATTTGCTACTTATGCAG+TGG + tig0032806:24300-24319 Msa1450180:intron 30.0%
TCAAAACAGAGAGATTGTTT+GGG + tig0032806:24334-24353 Msa1450180:CDS 30.0%
! TATGAGTTTTCCTACTTCAA+TGG + tig0032806:24378-24397 Msa1450180:CDS 30.0%
! ATGAGTTTTCCTACTTCAAT+GGG + tig0032806:24379-24398 Msa1450180:CDS 30.0%
!! GAAAGTGTTTCAAAAGAACA+AGG - tig0032806:24676-24695 None:intergenic 30.0%
ATCCCCAAATACAATAATTG+AGG + tig0032806:25020-25039 Msa1450180:CDS 30.0%
AGCCTCAATTATTGTATTTG+GGG - tig0032806:25025-25044 None:intergenic 30.0%
CAGCCTCAATTATTGTATTT+GGG - tig0032806:25026-25045 None:intergenic 30.0%
ACAGCCTCAATTATTGTATT+TGG - tig0032806:25027-25046 None:intergenic 30.0%
ACATATTAGTAGTCTGAGAA+AGG + tig0032806:25086-25105 Msa1450180:CDS 30.0%
ATCAAGGTAATTGAAAACAC+TGG - tig0032806:25139-25158 None:intergenic 30.0%
TTCCAAAAGGTAAAGCTATT+TGG + tig0032806:25202-25221 Msa1450180:intron 30.0%
!! AACCAAATAGCTTTACCTTT+TGG - tig0032806:25207-25226 None:intergenic 30.0%
ATTTGGTTAAAGCTCATGAA+TGG + tig0032806:25219-25238 Msa1450180:intron 30.0%
ATTAACACAGATTACATCTG+AGG + tig0032806:25481-25500 Msa1450180:intron 30.0%
!! GCTTTTTCCTTTGACATAAT+TGG - tig0032806:25535-25554 None:intergenic 30.0%
CCACAACATGAACAAAAAAT+TGG - tig0032806:25575-25594 None:intergenic 30.0%
!!! CCAATTTTTTGTTCATGTTG+TGG + tig0032806:25572-25591 Msa1450180:CDS 30.0%
!!! GAGAACCTATTTTTGTAGAA+AGG + tig0032806:25607-25626 Msa1450180:CDS 30.0%
CTACAACAACAAAAGAGATT+TGG + tig0032806:25906-25925 Msa1450180:CDS 30.0%
! AAATTAGCAGCTTTTGGTAA+AGG - tig0032806:25997-26016 None:intergenic 30.0%
! TTACCAAAAGCTGCTAATTT+TGG + tig0032806:25997-26016 Msa1450180:CDS 30.0%
! GGAGTAGATATATGCATTTT+TGG + tig0032806:26501-26520 Msa1450180:CDS 30.0%
CAATATCTCATGGTAAACAA+AGG - tig0032806:26655-26674 None:intergenic 30.0%
! CTTTGTTTACCATGAGATAT+TGG + tig0032806:26653-26672 Msa1450180:CDS 30.0%
TATTCTTCCTATCATCAGAT+TGG + tig0032806:26746-26765 Msa1450180:intron 30.0%
! CCTTGATTTTTGTAAGAAAC+GGG + tig0032806:26772-26791 Msa1450180:CDS 30.0%
! CTTGATTTTTGTAAGAAACG+GGG + tig0032806:26773-26792 Msa1450180:CDS 30.0%
ATAAAGATTCAGTGGTTACA+TGG - tig0032806:27031-27050 None:intergenic 30.0%
TTCTTTGTTCCTACTGAAAA+AGG + tig0032806:27138-27157 Msa1450180:CDS 30.0%
TCTTTGTTCCTACTGAAAAA+GGG + tig0032806:27139-27158 Msa1450180:CDS 30.0%
!! ATGGTCTTTAAAGCTCTATT+TGG - tig0032806:27297-27316 None:intergenic 30.0%
!! AAATAGAGCTTTAAAGACCA+TGG + tig0032806:27296-27315 Msa1450180:CDS 30.0%
!! AATAGAGCTTTAAAGACCAT+GGG + tig0032806:27297-27316 Msa1450180:CDS 30.0%
! GTTGATGAAAGTAAAAGACA+AGG - tig0032806:27384-27403 None:intergenic 30.0%
TATGTATTCATTTCAAAGGG+AGG - tig0032806:27749-27768 None:intergenic 30.0%
TGCATTGAGTGCAATAAAAA+AGG + tig0032806:27782-27801 Msa1450180:intron 30.0%
! CATATGAAAACTTCAGGTTT+AGG - tig0032806:27908-27927 None:intergenic 30.0%
GATATCATTATGCTTAGTGT+TGG - tig0032806:28008-28027 None:intergenic 30.0%
TTTCAAATAATCCACTCTCA+AGG - tig0032806:28033-28052 None:intergenic 30.0%
CAAACTGAAATTGATACTTC+TGG - tig0032806:28081-28100 None:intergenic 30.0%
GATCATCATTGATGAATACT+TGG - tig0032806:28119-28138 None:intergenic 30.0%
! TTCTTGATTTGAGAACAGTT+TGG - tig0032806:28547-28566 None:intergenic 30.0%
!!! TCACAACAGTCATTTTTTTG+TGG + tig0032806:28808-28827 Msa1450180:intron 30.0%
TTAACTTCTTACAGGAAGGA+GGG - tig0032806:22835-22854 None:intergenic 35.0%
TAAAGAAAGAGACACAAAGG+AGG + tig0032806:22864-22883 Msa1450180:five_prime_UTR 35.0%
AAAGAAAGAGACACAAAGGA+GGG + tig0032806:22865-22884 Msa1450180:five_prime_UTR 35.0%
AGGGTTAGGGTTTAAGAATT+GGG - tig0032806:22965-22984 None:intergenic 35.0%
TAGGGTTAGGGTTTAAGAAT+TGG - tig0032806:22966-22985 None:intergenic 35.0%
GTGCTTAATTGACAGAATAC+AGG - tig0032806:23830-23849 None:intergenic 35.0%
! TGTTTTTCTACGAATTTGGC+AGG + tig0032806:23853-23872 Msa1450180:intron 35.0%
GCAGGTCATGAACAATAAAA+GGG - tig0032806:23988-24007 None:intergenic 35.0%
ATTGCTTCCACCATATGAAA+CGG - tig0032806:24077-24096 None:intergenic 35.0%
CAAAGAAAGAAGCTCAAAGT+CGG - tig0032806:24237-24256 None:intergenic 35.0%
GTCAAAACAGAGAGATTGTT+TGG + tig0032806:24333-24352 Msa1450180:CDS 35.0%
CAAAACAGAGAGATTGTTTG+GGG + tig0032806:24335-24354 Msa1450180:CDS 35.0%
AACTCATAGACTCGTTATTC+TGG - tig0032806:24366-24385 None:intergenic 35.0%
! ATTCCCTAAACTTGTTTCAG+CGG + tig0032806:24435-24454 Msa1450180:CDS 35.0%
TATCCGCTGAAACAAGTTTA+GGG - tig0032806:24441-24460 None:intergenic 35.0%
ATATCCGCTGAAACAAGTTT+AGG - tig0032806:24442-24461 None:intergenic 35.0%
ACTTGTTTCAGCGGATATTT+CGG + tig0032806:24444-24463 Msa1450180:CDS 35.0%
TGCTTAGAATTGGAAGATAC+AGG + tig0032806:24499-24518 Msa1450180:CDS 35.0%
GCTTAGAATTGGAAGATACA+GGG + tig0032806:24500-24519 Msa1450180:CDS 35.0%
TACGAAAAGACGGAAAATGA+CGG + tig0032806:24582-24601 Msa1450180:CDS 35.0%
!! AGTTTGCTTTTGACGTTTCT+TGG + tig0032806:24605-24624 Msa1450180:CDS 35.0%
!! GTTTGCTTTTGACGTTTCTT+GGG + tig0032806:24606-24625 Msa1450180:CDS 35.0%
! TGATCAATCGACTTACAAGA+AGG + tig0032806:24645-24664 Msa1450180:CDS 35.0%
GAAATACAGCAGAAACTCAA+TGG + tig0032806:24765-24784 Msa1450180:CDS 35.0%
ACTCAATGGAAATCAACAGT+AGG + tig0032806:24779-24798 Msa1450180:CDS 35.0%
!! AGATATTGATGACGATGAAG+AGG + tig0032806:24825-24844 Msa1450180:CDS 35.0%
! TTTTATCGTTTATCCCATCC+TGG - tig0032806:24957-24976 None:intergenic 35.0%
ACGTGTGAACAAATCAATCA+AGG - tig0032806:25052-25071 None:intergenic 35.0%
AGTCATACGTAAACAGATCA+AGG - tig0032806:25155-25174 None:intergenic 35.0%
CATGAACCAACTATTCCAAA+AGG + tig0032806:25189-25208 Msa1450180:intron 35.0%
!!! GCTTTACCTTTTGGAATAGT+TGG - tig0032806:25198-25217 None:intergenic 35.0%
ACACATGCCAATTATGTCAA+AGG + tig0032806:25525-25544 Msa1450180:CDS 35.0%
CATGAACAAAAAATTGGCAC+TGG - tig0032806:25569-25588 None:intergenic 35.0%
GAAGAAGAATTTGATGCACA+GGG + tig0032806:25629-25648 Msa1450180:CDS 35.0%
GTGGGAAAATTACGTTCAAT+GGG + tig0032806:25687-25706 Msa1450180:CDS 35.0%
TGGGAAAATTACGTTCAATG+GGG + tig0032806:25688-25707 Msa1450180:CDS 35.0%
!! ATGACTGTTGTTTCTTCTAG+TGG + tig0032806:25836-25855 Msa1450180:intron 35.0%
!! TGACTGTTGTTTCTTCTAGT+GGG + tig0032806:25837-25856 Msa1450180:intron 35.0%
! ATTTCTTTTAAGCGGCATAC+AGG - tig0032806:25955-25974 None:intergenic 35.0%
!! AAGACTTTTTGAGCGTCTTA+TGG + tig0032806:26065-26084 Msa1450180:CDS 35.0%
CAAACTGGGAAAAAGTTGAA+GGG + tig0032806:26097-26116 Msa1450180:CDS 35.0%
! GAAAGTGAATAAGCTGTTTC+TGG + tig0032806:26299-26318 Msa1450180:CDS 35.0%
ATCTATAAGAGAATTCGGCA+GGG - tig0032806:26347-26366 None:intergenic 35.0%
TAGATCAAGAGTAAGTTCAG+TGG + tig0032806:26362-26381 Msa1450180:intron 35.0%
!! AGTTCTGAAGATGCAATTTG+TGG - tig0032806:26412-26431 None:intergenic 35.0%
! ATGGTAAACAAAGGTACGAA+GGG - tig0032806:26646-26665 None:intergenic 35.0%
! AAGGTATCCAATCTGATGAT+AGG - tig0032806:26756-26775 None:intergenic 35.0%
CCCGTTTCTTACAAAAATCA+AGG - tig0032806:26775-26794 None:intergenic 35.0%
! TAATCATCCCCTTTTCTTGA+AGG - tig0032806:26830-26849 None:intergenic 35.0%
ATTCAACACAGAGACACATA+AGG - tig0032806:26929-26948 None:intergenic 35.0%
GGGAAAAAAGAAAAGGAAGA+AGG - tig0032806:27530-27549 None:intergenic 35.0%
AATTGGGGGGAAAAAAGAAA+AGG - tig0032806:27537-27556 None:intergenic 35.0%
! TTTTCCCCCCAATTTTCATT+AGG + tig0032806:27543-27562 Msa1450180:intron 35.0%
TGGCCAACCTAATGAAAATT+GGG - tig0032806:27553-27572 None:intergenic 35.0%
TTGGCCAACCTAATGAAAAT+TGG - tig0032806:27554-27573 None:intergenic 35.0%
CACTGAATGCAAGAAATTTC+AGG + tig0032806:27672-27691 Msa1450180:CDS 35.0%
! AGAAATTTCAGGAGTGTGAA+AGG + tig0032806:27683-27702 Msa1450180:CDS 35.0%
AAATGTGTGCATCAGAACTA+TGG - tig0032806:27846-27865 None:intergenic 35.0%
GATGCACACATTTCAAAGAA+TGG + tig0032806:27853-27872 Msa1450180:CDS 35.0%
! TCATTATGCTTAGTGTTGGA+GGG - tig0032806:28004-28023 None:intergenic 35.0%
! ATCATTATGCTTAGTGTTGG+AGG - tig0032806:28005-28024 None:intergenic 35.0%
AATGATATCATCCTTGAGAG+TGG + tig0032806:28019-28038 Msa1450180:CDS 35.0%
ACTTCTGGCAAAAACTCAAA+AGG - tig0032806:28066-28085 None:intergenic 35.0%
TCATTGATGAATACTTGGCA+CGG - tig0032806:28114-28133 None:intergenic 35.0%
TAGGGTTGTTTAAATGGTAG+AGG - tig0032806:28141-28160 None:intergenic 35.0%
TTTGAGTCAACTTGTGTTCA+TGG - tig0032806:28291-28310 None:intergenic 35.0%
TCAACACCACTATGTCAATT+TGG + tig0032806:28337-28356 Msa1450180:CDS 35.0%
CAACACCACTATGTCAATTT+GGG + tig0032806:28338-28357 Msa1450180:CDS 35.0%
TCGTGAGTCAAATGAGAAAA+CGG + tig0032806:28363-28382 Msa1450180:CDS 35.0%
ACGGTATGAACTTAATTCTC+AGG + tig0032806:28382-28401 Msa1450180:intron 35.0%
GGTGCAAAATTCGAGTAAAT+CGG + tig0032806:28587-28606 Msa1450180:CDS 35.0%
GTGCAAAATTCGAGTAAATC+GGG + tig0032806:28588-28607 Msa1450180:CDS 35.0%
TGCAAAATTCGAGTAAATCG+GGG + tig0032806:28589-28608 Msa1450180:CDS 35.0%
! ACCATATCTTTTTACAGTGC+TGG - tig0032806:28618-28637 None:intergenic 35.0%
TAACTTCTTACAGGAAGGAG+GGG - tig0032806:22834-22853 None:intergenic 40.0%
CTTAACTTCTTACAGGAAGG+AGG - tig0032806:22836-22855 None:intergenic 40.0%
CTGCTTAACTTCTTACAGGA+AGG - tig0032806:22839-22858 None:intergenic 40.0%
TCCTGTAAGAAGTTAAGCAG+AGG + tig0032806:22839-22858 Msa1450180:five_prime_UTR 40.0%
TCCTCTGCTTAACTTCTTAC+AGG - tig0032806:22843-22862 None:intergenic 40.0%
GGGTTAGGGTTTAAGAATTG+GGG - tig0032806:22964-22983 None:intergenic 40.0%
! CTGAACTTGGTGGGAATATT+TGG + tig0032806:23370-23389 Msa1450180:CDS 40.0%
TGGATTACTTACATGTGGAC+TGG - tig0032806:23466-23485 None:intergenic 40.0%
CCTACTGGATTACTTACATG+TGG - tig0032806:23471-23490 None:intergenic 40.0%
CCACATGTAAGTAATCCAGT+AGG + tig0032806:23468-23487 Msa1450180:CDS 40.0%
TAATCCAGTAGGATTCTCCA+CGG + tig0032806:23479-23498 Msa1450180:CDS 40.0%
! TGACGGTTGTATGTCATTTC+GGG - tig0032806:23519-23538 None:intergenic 40.0%
! GTGACGGTTGTATGTCATTT+CGG - tig0032806:23520-23539 None:intergenic 40.0%
AAATGACATACAACCGTCAC+TGG + tig0032806:23520-23539 Msa1450180:CDS 40.0%
! TTTTCTACGAATTTGGCAGG+AGG + tig0032806:23856-23875 Msa1450180:intron 40.0%
GTTATTATGGCGTTCCAGAA+GGG + tig0032806:23951-23970 Msa1450180:CDS 40.0%
GGCAGGTCATGAACAATAAA+AGG - tig0032806:23989-24008 None:intergenic 40.0%
ACACACATATCAGCAAGTAG+GGG - tig0032806:24040-24059 None:intergenic 40.0%
CACACACATATCAGCAAGTA+GGG - tig0032806:24041-24060 None:intergenic 40.0%
CGTAACTTACCCGTTTCATA+TGG + tig0032806:24064-24083 Msa1450180:CDS 40.0%
AACTTACCCGTTTCATATGG+TGG + tig0032806:24067-24086 Msa1450180:CDS 40.0%
TTGCTTCCACCATATGAAAC+GGG - tig0032806:24076-24095 None:intergenic 40.0%
! TTCATATGGTGGAAGCAATC+TGG + tig0032806:24078-24097 Msa1450180:CDS 40.0%
! ATTTGCTACTTATGCAGTGG+AGG + tig0032806:24303-24322 Msa1450180:intron 40.0%
ATGGACTTTCCCATTGAAGT+AGG - tig0032806:24391-24410 None:intergenic 40.0%
ACTCGTGCTAGGAAAAAGAT+TGG - tig0032806:24476-24495 None:intergenic 40.0%
CACGAGTTCATGCTTAGAAT+TGG + tig0032806:24489-24508 Msa1450180:CDS 40.0%
! TTCTGAAAATCCAACTCCTG+GGG - tig0032806:24535-24554 None:intergenic 40.0%
!! GTTCTGAAAATCCAACTCCT+GGG - tig0032806:24536-24555 None:intergenic 40.0%
!! TGTTCTGAAAATCCAACTCC+TGG - tig0032806:24537-24556 None:intergenic 40.0%
! TCTTTTCGTAGGTTGTAGCA+TGG - tig0032806:24572-24591 None:intergenic 40.0%
TGCTACAACCTACGAAAAGA+CGG + tig0032806:24572-24591 Msa1450180:CDS 40.0%
!! GTCATTTTCCGTCTTTTCGT+AGG - tig0032806:24583-24602 None:intergenic 40.0%
TTAAGTTCCTTCCTGAGAGT+AGG - tig0032806:24805-24824 None:intergenic 40.0%
TATTGTTCATGAGGGTGAAG+AGG + tig0032806:24906-24925 Msa1450180:CDS 40.0%
TCTGAGAAAGGAATCTGTTC+AGG + tig0032806:25098-25117 Msa1450180:CDS 40.0%
TAATTGAAAACACTGGCAGG+TGG - tig0032806:25132-25151 None:intergenic 40.0%
AGGTAATTGAAAACACTGGC+AGG - tig0032806:25135-25154 None:intergenic 40.0%
AACACAGATTACATCTGAGG+AGG + tig0032806:25484-25503 Msa1450180:intron 40.0%
GGAAGAAGAATTTGATGCAC+AGG + tig0032806:25628-25647 Msa1450180:CDS 40.0%
GGTGGGAAAATTACGTTCAA+TGG + tig0032806:25686-25705 Msa1450180:CDS 40.0%
! GCACCAAAATTAGCAGCTTT+TGG - tig0032806:26003-26022 None:intergenic 40.0%
TTATGGAAGAGAGAGCAAAC+TGG + tig0032806:26082-26101 Msa1450180:CDS 40.0%
TATGGAAGAGAGAGCAAACT+GGG + tig0032806:26083-26102 Msa1450180:CDS 40.0%
GCAAACTGGGAAAAAGTTGA+AGG + tig0032806:26096-26115 Msa1450180:CDS 40.0%
AGGGAACGAGAATCTTGATA+AGG + tig0032806:26116-26135 Msa1450180:CDS 40.0%
GATCTATAAGAGAATTCGGC+AGG - tig0032806:26348-26367 None:intergenic 40.0%
CTTCTGTTTCAGCAGATTGA+AGG + tig0032806:26480-26499 Msa1450180:CDS 40.0%
! ATGTGTACACAACGCTGATT+TGG - tig0032806:26564-26583 None:intergenic 40.0%
! CATGGTAAACAAAGGTACGA+AGG - tig0032806:26647-26666 None:intergenic 40.0%
GAGAAAGAAAGACTGACCAA+CGG - tig0032806:26907-26926 None:intergenic 40.0%
!!! TTGGAGTTCCCTTTTTCAGT+AGG - tig0032806:27150-27169 None:intergenic 40.0%
TACTGAAAAAGGGAACTCCA+AGG + tig0032806:27149-27168 Msa1450180:CDS 40.0%
TCTCGTTTGCCATACTTTGA+TGG + tig0032806:27180-27199 Msa1450180:CDS 40.0%
CAGTAGTCTCCATCAAAGTA+TGG - tig0032806:27192-27211 None:intergenic 40.0%
CATACTTTGATGGAGACTAC+TGG + tig0032806:27190-27209 Msa1450180:CDS 40.0%
CTACTGGTGTGGTTATGTTA+TGG + tig0032806:27206-27225 Msa1450180:CDS 40.0%
AGGACCATTGAAAAAGAGAG+CGG + tig0032806:27237-27256 Msa1450180:CDS 40.0%
TCTTTGGCAGTGTCTTTAGA+AGG - tig0032806:27333-27352 None:intergenic 40.0%
TTGCATCACCAGAATGTCTT+TGG - tig0032806:27349-27368 None:intergenic 40.0%
TTCCCTTTATAGTCACCCAA+TGG + tig0032806:27407-27426 Msa1450180:intron 40.0%
TCCCTTTATAGTCACCCAAT+GGG + tig0032806:27408-27427 Msa1450180:intron 40.0%
TCCCATTGGGTGACTATAAA+GGG - tig0032806:27412-27431 None:intergenic 40.0%
ATCCCATTGGGTGACTATAA+AGG - tig0032806:27413-27432 None:intergenic 40.0%
CCAACCTAATGAAAATTGGG+GGG - tig0032806:27550-27569 None:intergenic 40.0%
GCCAACCTAATGAAAATTGG+GGG - tig0032806:27551-27570 None:intergenic 40.0%
GGCCAACCTAATGAAAATTG+GGG - tig0032806:27552-27571 None:intergenic 40.0%
CCAAAAGATATTGCCTACCA+GGG + tig0032806:27570-27589 Msa1450180:CDS 40.0%
! ATGATGAAGTTTTCCCTGGT+AGG - tig0032806:27586-27605 None:intergenic 40.0%
! AGCTATGATGAAGTTTTCCC+TGG - tig0032806:27590-27609 None:intergenic 40.0%
ACACATTTCAAAGAATGGCG+AGG + tig0032806:27858-27877 Msa1450180:CDS 40.0%
!!! TTGGATTGTGTGCTGTTTTC+AGG + tig0032806:27961-27980 Msa1450180:intron 40.0%
CCAGAGTAGGGTTGTTTAAA+TGG - tig0032806:28147-28166 None:intergenic 40.0%
CCATTTAAACAACCCTACTC+TGG + tig0032806:28144-28163 Msa1450180:CDS 40.0%
CTTATAGCAAGCAGAGCAAA+TGG - tig0032806:28251-28270 None:intergenic 40.0%
!! CATTTGCTCTGCTTGCTATA+AGG + tig0032806:28249-28268 Msa1450180:CDS 40.0%
!! TCTGCTTGCTATAAGGATAG+AGG + tig0032806:28256-28275 Msa1450180:CDS 40.0%
CGATTCCCAAATTGACATAG+TGG - tig0032806:28346-28365 None:intergenic 40.0%
GAACAGTTTGGATAAGAGCA+TGG - tig0032806:28535-28554 None:intergenic 40.0%
GCCAGCACTGTAAAAAGATA+TGG + tig0032806:28614-28633 Msa1450180:CDS 40.0%
AATGTAGAATACCACGTTGC+AGG + tig0032806:28677-28696 Msa1450180:CDS 40.0%
TTCTTGACGCGCCATAAAGA+GGG - tig0032806:23249-23268 None:intergenic 45.0%
AGCTGAAAAGATGCTTGCGA+AGG + tig0032806:23344-23363 Msa1450180:exon 45.0%
GCTGAAAAGATGCTTGCGAA+GGG + tig0032806:23345-23364 Msa1450180:exon 45.0%
! ACTTACCACTGCTGCTTCAA+AGG + tig0032806:23713-23732 Msa1450180:CDS 45.0%
!! ACAAACCTTTGAAGCAGCAG+TGG - tig0032806:23721-23740 None:intergenic 45.0%
GCAGGAGGAATATATGAACC+TGG + tig0032806:23871-23890 Msa1450180:intron 45.0%
! TCTGATGCCGCTGGTTATTA+TGG + tig0032806:23938-23957 Msa1450180:CDS 45.0%
TGGAACGCCATAATAACCAG+CGG - tig0032806:23948-23967 None:intergenic 45.0%
GGTTATTATGGCGTTCCAGA+AGG + tig0032806:23950-23969 Msa1450180:CDS 45.0%
ACACATATCAGCAAGTAGGG+GGG - tig0032806:24038-24057 None:intergenic 45.0%
CACACATATCAGCAAGTAGG+GGG - tig0032806:24039-24058 None:intergenic 45.0%
GCACACACATATCAGCAAGT+AGG - tig0032806:24042-24061 None:intergenic 45.0%
! GTTGCTACTTGATCTGGTGT+TGG - tig0032806:24107-24126 None:intergenic 45.0%
TCTAAGCATGAACTCGTGCT+AGG - tig0032806:24487-24506 None:intergenic 45.0%
CAGTTAGAGACTATCGAGTC+TGG + tig0032806:24709-24728 Msa1450180:CDS 45.0%
! TCTGGAATGATTCCCTCGAA+AGG + tig0032806:24727-24746 Msa1450180:CDS 45.0%
CCAGATTCTAAGCCTTTCGA+GGG - tig0032806:24742-24761 None:intergenic 45.0%
GACGATGAAGAGGACATACA+AGG + tig0032806:24835-24854 Msa1450180:CDS 45.0%
TATCCCATCCTGGTTGAATC+CGG - tig0032806:24947-24966 None:intergenic 45.0%
ATTACATCTGAGGAGGAAGC+AGG + tig0032806:25491-25510 Msa1450180:CDS 45.0%
!!! AGCTGCTAATTTTGGTGCCA+AGG + tig0032806:26005-26024 Msa1450180:CDS 45.0%
TTCTAAGTGGTCACTGAGCA+TGG - tig0032806:26043-26062 None:intergenic 45.0%
! GTTTCTGGACATCATTCCAG+AGG + tig0032806:26314-26333 Msa1450180:CDS 45.0%
!!! CATTTTTGGAATGTACGCCC+AGG + tig0032806:26515-26534 Msa1450180:CDS 45.0%
!! CTGATTTGGATTGCCGCATT+CGG - tig0032806:26550-26569 None:intergenic 45.0%
CCACTCTTTGTTCTTCTCTC+AGG - tig0032806:26618-26637 None:intergenic 45.0%
CCTGAGAGAAGAACAAAGAG+TGG + tig0032806:26615-26634 Msa1450180:CDS 45.0%
CCTGTGCTCCTTCAAGAAAA+GGG + tig0032806:26819-26838 Msa1450180:CDS 45.0%
CTGTGCTCCTTCAAGAAAAG+GGG + tig0032806:26820-26839 Msa1450180:CDS 45.0%
! TTCGGAGTCTTTTGCTCTTC+AGG - tig0032806:26869-26888 None:intergenic 45.0%
CGGCGTAGCTTATCATTCTT+CGG - tig0032806:26887-26906 None:intergenic 45.0%
AGAATGATAAGCTACGCCGT+TGG + tig0032806:26888-26907 Msa1450180:CDS 45.0%
CAAACGAGAAGTTGTCACCT+TGG - tig0032806:27169-27188 None:intergenic 45.0%
TTTGATGGAGACTACTGGTG+TGG + tig0032806:27195-27214 Msa1450180:CDS 45.0%
GTTATGTTATGGAAGCAGCC+AGG + tig0032806:27217-27236 Msa1450180:CDS 45.0%
!!! GCTCTCTTTTTCAATGGTCC+TGG - tig0032806:27238-27257 None:intergenic 45.0%
ACCATTGAAAAAGAGAGCGG+AGG + tig0032806:27240-27259 Msa1450180:CDS 45.0%
!!! TCCTCCGCTCTCTTTTTCAA+TGG - tig0032806:27244-27263 None:intergenic 45.0%
! GGCAGTGTCTTTAGAAGGAT+TGG - tig0032806:27328-27347 None:intergenic 45.0%
AGACACTGCCAAAGACATTC+TGG + tig0032806:27338-27357 Msa1450180:CDS 45.0%
! CCCCCCAATTTTCATTAGGT+TGG + tig0032806:27547-27566 Msa1450180:intron 45.0%
GCCAAAAGATATTGCCTACC+AGG + tig0032806:27569-27588 Msa1450180:CDS 45.0%
! CCCTGGTAGGCAATATCTTT+TGG - tig0032806:27573-27592 None:intergenic 45.0%
TGCCATGAAGTGATAGCATC+TGG + tig0032806:27634-27653 Msa1450180:CDS 45.0%
GCCATGAAGTGATAGCATCT+GGG + tig0032806:27635-27654 Msa1450180:CDS 45.0%
TCCCAGATGCTATCACTTCA+TGG - tig0032806:27639-27658 None:intergenic 45.0%
TTGATGAATACTTGGCACGG+CGG - tig0032806:28111-28130 None:intergenic 45.0%
TTCCAACAGTCACCAGAGTA+GGG - tig0032806:28159-28178 None:intergenic 45.0%
TTTCCAACAGTCACCAGAGT+AGG - tig0032806:28160-28179 None:intergenic 45.0%
GCAGAGCAAATGGTACATTC+TGG - tig0032806:28241-28260 None:intergenic 45.0%
GCATGGTTCAGCATTAGTTG+CGG - tig0032806:28518-28537 None:intergenic 45.0%
AGCTATTCTCTCATGCTCGT+AGG + tig0032806:28566-28585 Msa1450180:CDS 45.0%
TTATACTAACTGCCCACTCC+AGG + tig0032806:28638-28657 Msa1450180:CDS 45.0%
GTCTTTGCAATTCCTGGAGT+GGG - tig0032806:28653-28672 None:intergenic 45.0%
AGTCTTTGCAATTCCTGGAG+TGG - tig0032806:28654-28673 None:intergenic 45.0%
CTCCAGGAATTGCAAAGACT+CGG + tig0032806:28654-28673 Msa1450180:CDS 45.0%
TTCCGAGTCTTTGCAATTCC+TGG - tig0032806:28659-28678 None:intergenic 45.0%
AAGCAACGCATTCCGAATCT+TGG + tig0032806:28907-28926 Msa1450180:CDS 45.0%
AACAACAGCGTCAGCGATAC+AGG + tig0032806:22896-22915 Msa1450180:five_prime_UTR 50.0%
GTTCTTGACGCGCCATAAAG+AGG - tig0032806:23250-23269 None:intergenic 50.0%
TGGCGCGTCAAGAACATTGT+TGG + tig0032806:23255-23274 Msa1450180:intron 50.0%
!! CTTGCGAAGGGTTCTGAACT+TGG + tig0032806:23357-23376 Msa1450180:CDS 50.0%
!! CGAAGGGTTCTGAACTTGGT+GGG + tig0032806:23361-23380 Msa1450180:CDS 50.0%
TGAGCAATTTGCCCCTATGC+TGG + tig0032806:23680-23699 Msa1450180:CDS 50.0%
!! TACGCTGATTCAACGTCTCC+AGG - tig0032806:23892-23911 None:intergenic 50.0%
! TCAGCGTATGCAAGCTCTAG+TGG + tig0032806:23904-23923 Msa1450180:CDS 50.0%
! CAGCGTATGCAAGCTCTAGT+GGG + tig0032806:23905-23924 Msa1450180:CDS 50.0%
GTTTCTAAGTCTGATGCCGC+TGG + tig0032806:23929-23948 Msa1450180:CDS 50.0%
GAACCATCATCAGGAGAGCA+AGG - tig0032806:24010-24029 None:intergenic 50.0%
!! GGGGTTGATGAACCATCATC+AGG - tig0032806:24019-24038 None:intergenic 50.0%
TACAGGGCGAAATAAACCCC+AGG + tig0032806:24516-24535 Msa1450180:CDS 50.0%
GCGAAATAAACCCCAGGAGT+TGG + tig0032806:24522-24541 Msa1450180:CDS 50.0%
CCCTCGAAAGGCTTAGAATC+TGG + tig0032806:24739-24758 Msa1450180:CDS 50.0%
GCCAGATTCTAAGCCTTTCG+AGG - tig0032806:24743-24762 None:intergenic 50.0%
TCAACAGTAGGCCTACTCTC+AGG + tig0032806:24791-24810 Msa1450180:CDS 50.0%
GAGGACATACAAGGCAGAAC+TGG + tig0032806:24844-24863 Msa1450180:CDS 50.0%
AGGCAGAACTGGATTCATCC+AGG + tig0032806:24855-24874 Msa1450180:CDS 50.0%
CAGAACTGGATTCATCCAGG+CGG + tig0032806:24858-24877 Msa1450180:CDS 50.0%
AGAACTGGATTCATCCAGGC+GGG + tig0032806:24859-24878 Msa1450180:CDS 50.0%
! TTTTAGCATTTACCCCCGCC+TGG - tig0032806:24876-24895 None:intergenic 50.0%
GAGGGTGAAGAGGACATTCA+AGG + tig0032806:24916-24935 Msa1450180:CDS 50.0%
GAGGACATTCAAGGCAGAAC+CGG + tig0032806:24925-24944 Msa1450180:CDS 50.0%
AGAACCGGATTCAACCAGGA+TGG + tig0032806:24940-24959 Msa1450180:CDS 50.0%
GAACCGGATTCAACCAGGAT+GGG + tig0032806:24941-24960 Msa1450180:CDS 50.0%
CATGGTTCTTGGCAAGTCCT+TGG - tig0032806:26025-26044 None:intergenic 50.0%
TGGTCACTGAGCATGGTTCT+TGG - tig0032806:26036-26055 None:intergenic 50.0%
! TCGGCAGGGTAATTTTCCTC+TGG - tig0032806:26333-26352 None:intergenic 50.0%
GCCTGTGCTCCTTCAAGAAA+AGG + tig0032806:26818-26837 Msa1450180:CDS 50.0%
!! CCCTTTTCTTGAAGGAGCAC+AGG - tig0032806:26822-26841 None:intergenic 50.0%
! AGAAGGATTGGCATGTCCCA+TGG - tig0032806:27316-27335 None:intergenic 50.0%
TGATAGCATCTGGGAAGCGA+TGG + tig0032806:27644-27663 Msa1450180:CDS 50.0%
CGAGGTGCATACACTATGTC+AGG + tig0032806:27876-27895 Msa1450180:CDS 50.0%
AACCCTACTCTGGTGACTGT+TGG + tig0032806:28154-28173 Msa1450180:CDS 50.0%
! CGCTGACGCTGTTGTTGTTG+TGG - tig0032806:22892-22911 None:intergenic 55.0%
!! GCGAAGGGTTCTGAACTTGG+TGG + tig0032806:23360-23379 Msa1450180:CDS 55.0%
CAGTCCGTGGAGAATCCTAC+TGG - tig0032806:23486-23505 None:intergenic 55.0%
CAGTAGGATTCTCCACGGAC+TGG + tig0032806:23484-23503 Msa1450180:CDS 55.0%
GGGTCAGATAGTCTCCCTTC+TGG - tig0032806:23968-23987 None:intergenic 55.0%
CATCATCAGGAGAGCAAGGC+AGG - tig0032806:24006-24025 None:intergenic 55.0%
CTGCCTTGCTCTCCTGATGA+TGG + tig0032806:24004-24023 Msa1450180:CDS 55.0%
CAGTAGGCCTACTCTCAGGA+AGG + tig0032806:24795-24814 Msa1450180:CDS 55.0%
GAACTGGATTCATCCAGGCG+GGG + tig0032806:24860-24879 Msa1450180:CDS 55.0%
AACTGGATTCATCCAGGCGG+GGG + tig0032806:24861-24880 Msa1450180:CDS 55.0%
AGGCAGAACCGGATTCAACC+AGG + tig0032806:24936-24955 Msa1450180:CDS 55.0%
CATGTTGTGGCGTACGCATC+AGG + tig0032806:25585-25604 Msa1450180:CDS 55.0%
GGAATGTACGCCCAGGAGTT+CGG + tig0032806:26522-26541 Msa1450180:CDS 55.0%
CACGCAGATGCTGAAACTGC+TGG + tig0032806:28465-28484 Msa1450180:intron 55.0%
ACAGTCACACACCTGCAACG+TGG - tig0032806:28691-28710 None:intergenic 55.0%
ACGCATTCCGAATCTTGGCG+TGG + tig0032806:28912-28931 Msa1450180:CDS 55.0%
TGCAGCTCCACGCCAAGATT+CGG - tig0032806:28922-28941 None:intergenic 55.0%
! GGGATGATAACGCCAGTCCG+TGG - tig0032806:23499-23518 None:intergenic 60.0%
GCATTCGGAGCCGAACTCCT+GGG - tig0032806:26535-26554 None:intergenic 60.0%
CAGGAGTTCGGCTCCGAATG+CGG + tig0032806:26534-26553 Msa1450180:CDS 60.0%
CGCATTCGGAGCCGAACTCC+TGG - tig0032806:26536-26555 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0032806 gene 22800 29172 22800 ID=Msa1450180;Name=Msa1450180
tig0032806 mRNA 22800 29172 22800 ID=Msa1450180-mRNA-1;Parent=Msa1450180;Name=Msa1450180-mRNA-1;_AED=0.12;_eAED=0.12;_QI=148|1|1|1|0.93|0.87|16|195|1194
tig0032806 exon 22800 22917 22800 ID=Msa1450180-mRNA-1:exon:17308;Parent=Msa1450180-mRNA-1
tig0032806 exon 23324 23556 23324 ID=Msa1450180-mRNA-1:exon:17309;Parent=Msa1450180-mRNA-1
tig0032806 exon 23662 23734 23662 ID=Msa1450180-mRNA-1:exon:17310;Parent=Msa1450180-mRNA-1
tig0032806 exon 23875 24118 23875 ID=Msa1450180-mRNA-1:exon:17311;Parent=Msa1450180-mRNA-1
tig0032806 exon 24320 25119 24320 ID=Msa1450180-mRNA-1:exon:17312;Parent=Msa1450180-mRNA-1
tig0032806 exon 25491 25769 25491 ID=Msa1450180-mRNA-1:exon:17313;Parent=Msa1450180-mRNA-1
tig0032806 exon 25856 26137 25856 ID=Msa1450180-mRNA-1:exon:17314;Parent=Msa1450180-mRNA-1
tig0032806 exon 26243 26371 26243 ID=Msa1450180-mRNA-1:exon:17315;Parent=Msa1450180-mRNA-1
tig0032806 exon 26474 26674 26474 ID=Msa1450180-mRNA-1:exon:17316;Parent=Msa1450180-mRNA-1
tig0032806 exon 26764 26909 26764 ID=Msa1450180-mRNA-1:exon:17317;Parent=Msa1450180-mRNA-1
tig0032806 exon 27068 27371 27068 ID=Msa1450180-mRNA-1:exon:17318;Parent=Msa1450180-mRNA-1
tig0032806 exon 27565 27704 27565 ID=Msa1450180-mRNA-1:exon:17319;Parent=Msa1450180-mRNA-1
tig0032806 exon 27840 27897 27840 ID=Msa1450180-mRNA-1:exon:17320;Parent=Msa1450180-mRNA-1
tig0032806 exon 27983 28384 27983 ID=Msa1450180-mRNA-1:exon:17321;Parent=Msa1450180-mRNA-1
tig0032806 exon 28472 28698 28472 ID=Msa1450180-mRNA-1:exon:17322;Parent=Msa1450180-mRNA-1
tig0032806 exon 28881 29172 28881 ID=Msa1450180-mRNA-1:exon:17323;Parent=Msa1450180-mRNA-1
tig0032806 five_prime_UTR 22800 22917 22800 ID=Msa1450180-mRNA-1:five_prime_utr;Parent=Msa1450180-mRNA-1
tig0032806 five_prime_UTR 23324 23353 23324 ID=Msa1450180-mRNA-1:five_prime_utr;Parent=Msa1450180-mRNA-1
tig0032806 CDS 23354 23556 23354 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 23662 23734 23662 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 23875 24118 23875 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 24320 25119 24320 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 25491 25769 25491 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 25856 26137 25856 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 26243 26371 26243 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 26474 26674 26474 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 26764 26909 26764 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 27068 27371 27068 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 27565 27704 27565 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 27840 27897 27840 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 27983 28384 27983 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 28472 28698 28472 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 CDS 28881 28977 28881 ID=Msa1450180-mRNA-1:cds;Parent=Msa1450180-mRNA-1
tig0032806 three_prime_UTR 28978 29172 28978 ID=Msa1450180-mRNA-1:three_prime_utr;Parent=Msa1450180-mRNA-1
Gene Sequence

>Msa1450180

ATGCTTGCGAAGGGTTCTGAACTTGGTGGGAATATTTGGAGAGAATTGCCAAGAAATTCTTCATCAGTTGTCTCAAACACTCCGCAAAAGAGATGTTTTGATAAATTATCCAGTCCACATGTAAGTAATCCAGTAGGATTCTCCACGGACTGGCGTTATCATCCCGAAATGACATACAACCGTCACTGGATAAGAAAAAGAATTTTTGAAATCATTCAGAATGAGCAATTTGCCCCTATGCTGGAATTATTACTACTTACCACTGCTGCTTCAAAGGAGGAATATATGAACCTGGAGACGTTGAATCAGCGTATGCAAGCTCTAGTGGGTGTTTCTAAGTCTGATGCCGCTGGTTATTATGGCGTTCCAGAAGGGAGACTATCTGACCCTTTTATTGTTCATGACCTGCCTTGCTCTCCTGATGATGGTTCATCAACCCCCCTACTTGCTGATATGTGTGTGCTTCGTAACTTACCCGTTTCATATGGTGGAAGCAATCTGGATGCCAACACCAGATCAATGGAGGTGAATCTGTCAAAACAGAGAGATTGTTTGGGGTTTATCCAGAATAACGAGTCTATGAGTTTTCCTACTTCAATGGGAAAGTCCATTCAATTTGAAGATTTACATTCGACATTCCCTAAACTTGTTTCAGCGGATATTTCGGAACAATCCAATCTTTTTCCTAGCACGAGTTCATGCTTAGAATTGGAAGATACAGGGCGAAATAAACCCCAGGAGTTGGATTTTCAGAACAGTTTCACTCATGCCATGCTACAACCTACGAAAAGACGGAAAATGACGGAGTTTGCTTTTGACGTTTCTTGGGTTAATGATGCAAGTTCTGATCAATCGACTTACAAGAAGGCTCAACCTTGTTCTTTTGAAACACTTTCAGAAGTGCAGCAACAGTTAGAGACTATCGAGTCTGGAATGATTCCCTCGAAAGGCTTAGAATCTGGCATGAAATACAGCAGAAACTCAATGGAAATCAACAGTAGGCCTACTCTCAGGAAGGAACTTAAAGATATTGATGACGATGAAGAGGACATACAAGGCAGAACTGGATTCATCCAGGCGGGGGTAAATGCTAAAAAAGAACTTATTATTGTTCATGAGGGTGAAGAGGACATTCAAGGCAGAACCGGATTCAACCAGGATGGGATAAACGATAAAAAAGAAATCATCGAGTCAAAAGATGATCAAGAGAAGCAAACAAAATCCCCAAATACAATAATTGAGGCTGTTTCCTTGATTGATTTGTTCACACGTGATCAAATAGAAGAACATATTAGTAGTCTGAGAAAGGAATCTGTTCAGATTACATCTGAGGAGGAAGCAGGAATTGATGCAAACACATGCCAATTATGTCAAAGGAAAAAGCTTTACTTTGCACCAGTGCCAATTTTTTGTTCATGTTGTGGCGTACGCATCAGGAGAACCTATTTTTGTAGAAAGGAAGAAGAATTTGATGCACAGGGTTGCATTTGCACCGTGTGTTATAAGAATTCTAAAGGTGGGAAAATTACGTTCAATGGGGCATTTGTTTCTAAGACAAATCTCGAAAAAAAGAATAACGATGAAGTTTTTGAAGAACCTTGGGTTGAATGCAATAAATGCAAAAGATGGCAGCATCAAATATGTGCACTCTACAACAACAAAAGAGATTTGGATTGCAGTGCTGAGTATATATGTCCTGTATGCCGCTTAAAAGAAATTAAAAACGGAATTCATGTTCCTTTACCAAAAGCTGCTAATTTTGGTGCCAAGGACTTGCCAAGAACCATGCTCAGTGACCACTTAGAAAAAAGACTTTTTGAGCGTCTTATGGAAGAGAGAGCAAACTGGGAAAAAGTTGAAGGGAACGAGAATCTTGATAAGGTTTCAGCAGCAGAAAGTCTTTCTATTAGAGAAGTGTTATCTGTCGACAAACAATTGAAAGTGAATAAGCTGTTTCTGGACATCATTCCAGAGGAAAATTACCCTGCCGAATTCTCTTATAGATCAAGAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGTAGATATATGCATTTTTGGAATGTACGCCCAGGAGTTCGGCTCCGAATGCGGCAATCCAAATCAGCGTTGTGTACACATTTCATATCTTGATTCTGTCAAGTATTTTAGGCCTGAGAGAAGAACAAAGAGTGGAGAAGCCCTTCGTACCTTTGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGTAAGAAACGGGGTTTCTCAACTTGCTACATATGGGCCTGTGCTCCTTCAAGAAAAGGGGATGATTATATACTATATTGTCATCCTGAAGAGCAAAAGACTCCGAAGAATGATAAGCTACGCCGTTGGTATCTTTCTATGATAAAAAAGGCTACTGAAGAAAATATTATTGTTGGTTTAACCAACGTATATGATCATTTCTTTGTTCCTACTGAAAAAGGGAACTCCAAGGTGACAACTTCTCGTTTGCCATACTTTGATGGAGACTACTGGTGTGGTTATGTTATGGAAGCAGCCAGGACCATTGAAAAAGAGAGCGGAGGAGACTATGAAAAGATGTTGAAGAAACAAGTGCCAAATAGAGCTTTAAAGACCATGGGACATGCCAATCCTTCTAAAGACACTGCCAAAGACATTCTGGTGATGCAAAAAGTTGGCCAAAAGATATTGCCTACCAGGGAAAACTTCATCATAGCTCACTTGCAGTATTCATGCATGCACTGCCATGAAGTGATAGCATCTGGGAAGCGATGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATAGTTCTGATGCACACATTTCAAAGAATGGCGAGGTGCATACACTATGTCAGGCTGTTGTTGATGATATTCCCTCCAACACTAAGCATAATGATATCATCCTTGAGAGTGGATTATTTGAAAATAGGAACAGCCTTTTGAGTTTTTGCCAGAAGTATCAATTTCAGTTTGACATACTCCGCCGTGCCAAGTATTCATCAATGATGATCCTCTACCATTTAAACAACCCTACTCTGGTGACTGTTGGAAAATGTAGCATTTGTTATGCACACAATATATTTCAAAAGTGCTGGAAATGTGAGATTTGTCCAGAATGTACCATTTGCTCTGCTTGCTATAAGGATAGAGGTGCTAACTGCCATGAACACAAGTTGACTCAAAATGAACTCACATTGACTCAAAATTATTCAACACCACTATGTCAATTTGGGAATCGTGAGTCAAATGAGAAAACGATGCTGAAACTGCTGGATGTTTTGAAGCATGCATCTCAATGTTCCGCAACTAATGCTGAACCATGCTCTTATCCAAACTGTTCTCAAATCAAGAAGCTATTCTCTCATGCTCGTAGGTGCAAAATTCGAGTAAATCGGGGATGCCAGCACTGTAAAAAGATATGGTTTATACTAACTGCCCACTCCAGGAATTGCAAAGACTCGGAATGTAGAATACCACGTTGCAGGGATCTGAAGAAGCATATAGAATCGAAAGCAACGCATTCCGAATCTTGGCGTGGAGCTGCAGTTATTGAAAGCGACACAGCAGTCGTTGATCAATGA
Protein sequence

>Msa1450180

MLAKGSELGGNIWRELPRNSSSVVSNTPQKRCFDKLSSPHVSNPVGFSTDWRYHPEMTYNRHWIRKRIFEIIQNEQFAPMLELLLLTTAASKEEYMNLETLNQRMQALVGVSKSDAAGYYGVPEGRLSDPFIVHDLPCSPDDGSSTPLLADMCVLRNLPVSYGGSNLDANTRSMEVNLSKQRDCLGFIQNNESMSFPTSMGKSIQFEDLHSTFPKLVSADISEQSNLFPSTSSCLELEDTGRNKPQELDFQNSFTHAMLQPTKRRKMTEFAFDVSWVNDASSDQSTYKKAQPCSFETLSEVQQQLETIESGMIPSKGLESGMKYSRNSMEINSRPTLRKELKDIDDDEEDIQGRTGFIQAGVNAKKELIIVHEGEEDIQGRTGFNQDGINDKKEIIESKDDQEKQTKSPNTIIEAVSLIDLFTRDQIEEHISSLRKESVQITSEEEAGIDANTCQLCQRKKLYFAPVPIFCSCCGVRIRRTYFCRKEEEFDAQGCICTVCYKNSKGGKITFNGAFVSKTNLEKKNNDEVFEEPWVECNKCKRWQHQICALYNNKRDLDCSAEYICPVCRLKEIKNGIHVPLPKAANFGAKDLPRTMLSDHLEKRLFERLMEERANWEKVEGNENLDKVSAAESLSIREVLSVDKQLKVNKLFLDIIPEENYPAEFSYRSRVILLFQQIEGVDICIFGMYAQEFGSECGNPNQRCVHISYLDSVKYFRPERRTKSGEALRTFVYHEILIGYLDFCKKRGFSTCYIWACAPSRKGDDYILYCHPEEQKTPKNDKLRRWYLSMIKKATEENIIVGLTNVYDHFFVPTEKGNSKVTTSRLPYFDGDYWCGYVMEAARTIEKESGGDYEKMLKKQVPNRALKTMGHANPSKDTAKDILVMQKVGQKILPTRENFIIAHLQYSCMHCHEVIASGKRWFCTECKKFQECERCHSSDAHISKNGEVHTLCQAVVDDIPSNTKHNDIILESGLFENRNSLLSFCQKYQFQFDILRRAKYSSMMILYHLNNPTLVTVGKCSICYAHNIFQKCWKCEICPECTICSACYKDRGANCHEHKLTQNELTLTQNYSTPLCQFGNRESNEKTMLKLLDVLKHASQCSATNAEPCSYPNCSQIKKLFSHARRCKIRVNRGCQHCKKIWFILTAHSRNCKDSECRIPRCRDLKKHIESKATHSESWRGAAVIESDTAVVDQ*