Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001580 | XP_003620940.1 | 97.101 | 138 | 4 | 0 | 1 | 138 | 77 | 214 | 2.60e-95 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001580 | sp|Q5TKD8|TRL2_ORYSJ | 77.372 | 137 | 27 | 1 | 1 | 137 | 81 | 213 | 1.65e-77 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001580 | G7KJV3 | 97.101 | 138 | 4 | 0 | 1 | 138 | 77 | 214 | 1.24e-95 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1001580 | -0.834269 | 3.304064e-56 | -8.615850e-47 |
| Msa0013050 | Msa1001580 | -0.815585 | 8.572443e-52 | -8.615850e-47 |
| Msa0044710 | Msa1001580 | 0.804046 | 2.607125e-49 | -8.615850e-47 |
| Msa0078000 | Msa1001580 | -0.803099 | 4.097384e-49 | -8.615850e-47 |
| Msa0085360 | Msa1001580 | -0.807234 | 5.584327e-50 | -8.615850e-47 |
| Msa0618010 | Msa1001580 | 0.825089 | 5.668224e-54 | -8.615850e-47 |
| Msa0621080 | Msa1001580 | -0.807699 | 4.450179e-50 | -8.615850e-47 |
| Msa0661710 | Msa1001580 | 0.822136 | 2.784123e-53 | -8.615850e-47 |
| Msa0712310 | Msa1001580 | 0.800615 | 1.326335e-48 | -8.615850e-47 |
| Msa0719420 | Msa1001580 | 0.802419 | 5.661051e-49 | -8.615850e-47 |
| Msa0784860 | Msa1001580 | 0.814387 | 1.581415e-51 | -8.615850e-47 |
| Msa0789680 | Msa1001580 | 0.805108 | 1.565235e-49 | -8.615850e-47 |
| Msa0790390 | Msa1001580 | -0.801161 | 1.026118e-48 | -8.615850e-47 |
| Msa0802410 | Msa1001580 | 0.826982 | 2.011809e-54 | -8.615850e-47 |
| Msa0813720 | Msa1001580 | 0.812707 | 3.702896e-51 | -8.615850e-47 |
| Msa0830990 | Msa1001580 | 0.800573 | 1.352817e-48 | -8.615850e-47 |
| Msa0148120 | Msa1001580 | 0.809853 | 1.540836e-50 | -8.615850e-47 |
| Msa0156650 | Msa1001580 | -0.803088 | 4.119562e-49 | -8.615850e-47 |
| Msa0168640 | Msa1001580 | -0.821624 | 3.656500e-53 | -8.615850e-47 |
| Msa0177700 | Msa1001580 | -0.818493 | 1.904316e-52 | -8.615850e-47 |
| Msa0178990 | Msa1001580 | 0.800628 | 1.318278e-48 | -8.615850e-47 |
| Msa0186310 | Msa1001580 | 0.858848 | 6.216278e-63 | -8.615850e-47 |
| Msa0219250 | Msa1001580 | -0.805284 | 1.437728e-49 | -8.615850e-47 |
| Msa0377530 | Msa1001580 | 0.804762 | 1.849236e-49 | -8.615850e-47 |
| Msa0377900 | Msa1001580 | -0.809129 | 2.203704e-50 | -8.615850e-47 |
| Msa0379410 | Msa1001580 | 0.802246 | 6.143743e-49 | -8.615850e-47 |
| Msa0380040 | Msa1001580 | 0.823861 | 1.102601e-53 | -8.615850e-47 |
| Msa0386040 | Msa1001580 | 0.825908 | 3.626957e-54 | -8.615850e-47 |
| Msa0387910 | Msa1001580 | 0.838033 | 3.657467e-57 | -8.615850e-47 |
| Msa0419640 | Msa1001580 | -0.804986 | 1.660144e-49 | -8.615850e-47 |
| Msa0421260 | Msa1001580 | 0.811217 | 7.816604e-51 | -8.615850e-47 |
| Msa0429290 | Msa1001580 | 0.827891 | 1.217471e-54 | -8.615850e-47 |
| Msa0429950 | Msa1001580 | 0.818231 | 2.183105e-52 | -8.615850e-47 |
| Msa0465790 | Msa1001580 | 0.807590 | 4.692006e-50 | -8.615850e-47 |
| Msa0467220 | Msa1001580 | 0.805392 | 1.364526e-49 | -8.615850e-47 |
| Msa0468160 | Msa1001580 | 0.809938 | 1.477415e-50 | -8.615850e-47 |
| Msa0469910 | Msa1001580 | -0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0473830 | Msa1001580 | -0.803210 | 3.886648e-49 | -8.615850e-47 |
| Msa0475580 | Msa1001580 | 0.825651 | 4.173571e-54 | -8.615850e-47 |
| Msa1001580 | Msa1047400 | 0.822082 | 2.865391e-53 | -8.615850e-47 |
| Msa1001580 | Msa1069660 | -0.819134 | 1.361863e-52 | -8.615850e-47 |
| Msa1001580 | Msa1077670 | 0.809498 | 1.836583e-50 | -8.615850e-47 |
| Msa1001580 | Msa1084470 | 0.806278 | 8.889431e-50 | -8.615850e-47 |
| Msa1001580 | Msa1088290 | 0.803570 | 3.273009e-49 | -8.615850e-47 |
| Msa1001580 | Msa1126120 | -0.850164 | 2.027186e-60 | -8.615850e-47 |
| Msa1001580 | Msa1171870 | 0.805975 | 1.029570e-49 | -8.615850e-47 |
| Msa1001580 | Msa1260130 | 0.806862 | 6.692667e-50 | -8.615850e-47 |
| Msa1001580 | Msa1306430 | 0.803598 | 3.229036e-49 | -8.615850e-47 |
| Msa1001580 | Msa1306580 | 0.813924 | 2.000657e-51 | -8.615850e-47 |
| Msa1001580 | Msa1375340 | 0.803574 | 3.267108e-49 | -8.615850e-47 |
| Msa1001580 | Msa1403580 | -0.808581 | 2.886253e-50 | -8.615850e-47 |
| Msa1001580 | Msa1403930 | -0.802215 | 6.236122e-49 | -8.615850e-47 |
| Msa1001580 | Msa1427830 | 0.801421 | 9.075948e-49 | -8.615850e-47 |
| Msa1001580 | Msa1442220 | -0.805272 | 1.446488e-49 | -8.615850e-47 |
| Msa1001580 | Msa1450180 | 0.802180 | 6.341193e-49 | -8.615850e-47 |
| Msa1001580 | Msa1452470 | 0.818109 | 2.326552e-52 | -8.615850e-47 |
| Msa1001580 | Msa1453620 | 0.808644 | 2.798238e-50 | -8.615850e-47 |
| Msa1001580 | Msa1454110 | 0.825354 | 4.906491e-54 | -8.615850e-47 |
| Msa1001580 | Msa1465960 | 0.823054 | 1.702622e-53 | -8.615850e-47 |
| Msa0244270 | Msa1001580 | 0.811890 | 5.581451e-51 | -8.615850e-47 |
| Msa0258880 | Msa1001580 | -0.801695 | 7.976228e-49 | -8.615850e-47 |
| Msa0275680 | Msa1001580 | -0.823147 | 1.619705e-53 | -8.615850e-47 |
| Msa0302650 | Msa1001580 | 0.818549 | 1.850235e-52 | -8.615850e-47 |
| Msa0358170 | Msa1001580 | 0.827750 | 1.316350e-54 | -8.615850e-47 |
| Msa0500720 | Msa1001580 | 0.806774 | 6.986051e-50 | -8.615850e-47 |
| Msa0517490 | Msa1001580 | 0.815589 | 8.557487e-52 | -8.615850e-47 |
| Msa0517840 | Msa1001580 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
| Msa0519220 | Msa1001580 | 0.834826 | 2.394259e-56 | -8.615850e-47 |
| Msa0525340 | Msa1001580 | 0.800032 | 1.742965e-48 | -8.615850e-47 |
| Msa0553220 | Msa1001580 | -0.803449 | 3.467483e-49 | -8.615850e-47 |
| Msa0579290 | Msa1001580 | 0.835538 | 1.583420e-56 | -8.615850e-47 |
| Msa0579390 | Msa1001580 | 0.818660 | 1.745382e-52 | -8.615850e-47 |
| Msa0590680 | Msa1001580 | 0.801987 | 6.946015e-49 | -8.615850e-47 |
| Msa0591770 | Msa1001580 | 0.815234 | 1.026162e-51 | -8.615850e-47 |
| Msa0865890 | Msa1001580 | 0.819022 | 1.444224e-52 | -8.615850e-47 |
| Msa0870150 | Msa1001580 | 0.812797 | 3.538574e-51 | -8.615850e-47 |
| Msa0874570 | Msa1001580 | 0.825234 | 5.239620e-54 | -8.615850e-47 |
| Msa0880220 | Msa1001580 | 0.805590 | 1.240263e-49 | -8.615850e-47 |
| Msa0909000 | Msa1001580 | -0.803958 | 2.718973e-49 | -8.615850e-47 |
| Msa0935850 | Msa1001580 | 0.812609 | 3.889515e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001580 | MtrunA17_Chr6g0488561 | 97.101 | 138 | 4 | 0 | 1 | 138 | 77 | 214 | 2.39e-99 | 283 |
| Msa1001580 | MtrunA17_Chr3g0092051 | 51.240 | 121 | 59 | 0 | 1 | 121 | 89 | 209 | 8.27e-45 | 147 |
| Msa1001580 | MtrunA17_Chr7g0253051 | 45.455 | 132 | 72 | 0 | 1 | 132 | 109 | 240 | 3.25e-38 | 130 |
| Msa1001580 | MtrunA17_Chr1g0155721 | 30.702 | 114 | 74 | 3 | 1 | 112 | 8 | 118 | 1.50e-16 | 70.5 |
| Msa1001580 | MtrunA17_Chr3g0142051 | 30.000 | 110 | 72 | 3 | 1 | 108 | 8 | 114 | 5.78e-13 | 61.2 |
| Msa1001580 | MtrunA17_Chr7g0249461 | 31.959 | 97 | 62 | 2 | 10 | 105 | 89 | 182 | 3.41e-12 | 60.8 |
| Msa1001580 | MtrunA17_Chr8g0393201 | 35.294 | 85 | 53 | 1 | 1 | 83 | 229 | 313 | 1.64e-11 | 60.5 |
| Msa1001580 | MtrunA17_Chr2g0317711 | 32.258 | 93 | 62 | 1 | 7 | 98 | 45 | 137 | 5.04e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001580 | AT4G29670.1 | 79.845 | 129 | 26 | 0 | 1 | 129 | 105 | 233 | 7.10e-74 | 220 |
| Msa1001580 | AT4G26160.1 | 77.982 | 109 | 24 | 0 | 1 | 109 | 95 | 203 | 2.35e-63 | 193 |
| Msa1001580 | AT4G29670.2 | 85.714 | 98 | 14 | 0 | 1 | 98 | 105 | 202 | 4.01e-60 | 185 |
| Msa1001580 | AT1G08570.4 | 45.455 | 132 | 72 | 0 | 1 | 132 | 1 | 132 | 8.92e-41 | 134 |
| Msa1001580 | AT1G08570.3 | 45.455 | 132 | 72 | 0 | 1 | 132 | 1 | 132 | 8.92e-41 | 134 |
| Msa1001580 | AT1G08570.2 | 45.455 | 132 | 72 | 0 | 1 | 132 | 68 | 199 | 5.39e-40 | 134 |
| Msa1001580 | AT5G61440.1 | 47.899 | 119 | 62 | 0 | 1 | 119 | 87 | 205 | 7.40e-40 | 134 |
| Msa1001580 | AT1G08570.1 | 45.455 | 132 | 72 | 0 | 1 | 132 | 99 | 230 | 1.12e-39 | 134 |
| Msa1001580 | AT2G33270.1 | 44.697 | 132 | 73 | 0 | 1 | 132 | 95 | 226 | 6.95e-39 | 132 |
| Msa1001580 | AT5G61440.2 | 48.980 | 98 | 50 | 0 | 1 | 98 | 87 | 184 | 1.16e-31 | 111 |
| Msa1001580 | AT2G35010.2 | 28.037 | 107 | 73 | 2 | 1 | 103 | 86 | 192 | 1.65e-13 | 64.7 |
| Msa1001580 | AT2G35010.1 | 28.037 | 107 | 73 | 2 | 1 | 103 | 86 | 192 | 1.65e-13 | 64.7 |
| Msa1001580 | AT5G42980.1 | 28.182 | 110 | 74 | 3 | 1 | 108 | 7 | 113 | 2.06e-12 | 60.1 |
| Msa1001580 | AT3G02730.1 | 28.713 | 101 | 68 | 2 | 10 | 109 | 78 | 175 | 5.62e-12 | 60.5 |
| Msa1001580 | AT5G16400.1 | 27.723 | 101 | 69 | 2 | 10 | 109 | 88 | 185 | 2.58e-11 | 58.9 |
| Msa1001580 | AT3G17880.2 | 36.585 | 82 | 50 | 1 | 1 | 80 | 265 | 346 | 3.60e-11 | 59.7 |
| Msa1001580 | AT3G17880.1 | 36.585 | 82 | 50 | 1 | 1 | 80 | 272 | 353 | 4.04e-11 | 59.7 |
Find 173 sgRNAs with CRISPR-Local
Find 646 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCACATCATAAGTCTTTC+TGG | 0.172934 | 6_4:+85421689 | None:intergenic |
| ATACGCCTTTGCTTGCAATT+TGG | 0.223660 | 6_4:-85430679 | Msa1001580:five_prime_UTR |
| TGAGGATGTTAGTATTATTA+TGG | 0.247265 | 6_4:-85430801 | Msa1001580:five_prime_UTR |
| GCTAGGATTGATGGGATTAT+AGG | 0.253384 | 6_4:-85430860 | Msa1001580:five_prime_UTR |
| GATGAATGAAGGGTTGAGTT+TGG | 0.256374 | 6_4:-85430612 | Msa1001580:five_prime_UTR |
| TCTTCTGACGGTTTCCGTTT+TGG | 0.265989 | 6_4:-85431391 | Msa1001580:five_prime_UTR |
| AAAGTGAGAGTTGGGAAAAC+TGG | 0.272244 | 6_4:+85431292 | None:intergenic |
| GATAGGATTCCACCGATTAT+TGG | 0.277114 | 6_4:-85430512 | Msa1001580:five_prime_UTR |
| ACTTTGAGGAAAACAATTTC+AGG | 0.279414 | 6_4:+85422954 | None:intergenic |
| GGCGGTGGGTGTGGTGGTTG+AGG | 0.279802 | 6_4:+85431456 | None:intergenic |
| CATTTCGGCTGGCCAGTTTC+CGG | 0.294033 | 6_4:+85424117 | None:intergenic |
| ATGAATGAAGGGTTGAGTTT+GGG | 0.298525 | 6_4:-85430611 | Msa1001580:five_prime_UTR |
| GAGGTGGCGGGCGGTGGGTG+TGG | 0.303467 | 6_4:+85431447 | None:intergenic |
| GTTGGTTCATGAGGGTTATA+AGG | 0.308467 | 6_4:-85430489 | Msa1001580:five_prime_UTR |
| TTTAGATGATTTAGCTTCTT+GGG | 0.316795 | 6_4:-85430732 | Msa1001580:five_prime_UTR |
| ATAAATGGTGCGCCTAATAA+TGG | 0.321445 | 6_4:-85430293 | Msa1001580:five_prime_UTR |
| ACTTCTATACTCAACATAAA+TGG | 0.331695 | 6_4:-85430308 | Msa1001580:five_prime_UTR |
| AGATGTTGCAGGAAAGAAAA+AGG | 0.341742 | 6_4:-85430129 | Msa1001580:intron |
| CTAGGATTGATGGGATTATA+GGG | 0.347578 | 6_4:-85430859 | Msa1001580:five_prime_UTR |
| ATAGGATTCCACCGATTATT+GGG | 0.353037 | 6_4:-85430511 | Msa1001580:five_prime_UTR |
| TGTGCAACTGTTCCGGAAAC+TGG | 0.354576 | 6_4:-85424129 | Msa1001580:five_prime_UTR |
| AAATTGCTGCTACTTACTTC+TGG | 0.356273 | 6_4:-85431105 | Msa1001580:five_prime_UTR |
| GTGGCGGGCGGTGGGTGTGG+TGG | 0.357412 | 6_4:+85431450 | None:intergenic |
| TCTCATCAAAATTTACTTTG+AGG | 0.360659 | 6_4:+85422940 | None:intergenic |
| TTCATTATGCGGATAGTGAT+AGG | 0.377177 | 6_4:-85430529 | Msa1001580:five_prime_UTR |
| AAGTATTGTAAGCATTATAA+TGG | 0.377795 | 6_4:-85431037 | Msa1001580:five_prime_UTR |
| GGGTTGAAATTAAATCGAAT+TGG | 0.379672 | 6_4:-85430712 | Msa1001580:five_prime_UTR |
| CCTTACTTCCACTTCTATAG+AGG | 0.379973 | 6_4:-85422879 | Msa1001580:CDS |
| ATTATTATGGTTGGTGATCA+TGG | 0.380070 | 6_4:-85430788 | Msa1001580:five_prime_UTR |
| CAAGCTGTTGCTAGGATTGA+TGG | 0.381489 | 6_4:-85430869 | Msa1001580:five_prime_UTR |
| GTGGGTGTGGTGGTTGAGGG+TGG | 0.383108 | 6_4:+85431460 | None:intergenic |
| TCAGGTATGTGCAACTGTTC+CGG | 0.391557 | 6_4:-85424136 | Msa1001580:intron |
| CGGAAACTGGCCAGCCGAAA+TGG | 0.392270 | 6_4:-85424116 | Msa1001580:five_prime_UTR |
| GGTTGAAATTAAATCGAATT+GGG | 0.392555 | 6_4:-85430711 | Msa1001580:five_prime_UTR |
| GCCTAAGGGAATCGGTGATT+TGG | 0.399227 | 6_4:-85421840 | Msa1001580:CDS |
| GAAAACTTCAGTGATATGTT+AGG | 0.399792 | 6_4:-85421576 | Msa1001580:three_prime_UTR |
| TTCTTCCCTCTTTCAAATTG+AGG | 0.399957 | 6_4:+85430371 | None:intergenic |
| GTGACAATGGAGTAATGGTT+AGG | 0.401432 | 6_4:+85431268 | None:intergenic |
| TAGAGGGGCTGAGGGGCAGC+TGG | 0.403020 | 6_4:-85422862 | Msa1001580:CDS |
| TGGCTAGCCATGAATCAAAA+TGG | 0.407125 | 6_4:-85431171 | Msa1001580:five_prime_UTR |
| GGTTAGGGAAAGTGAGAGTT+GGG | 0.409993 | 6_4:+85431284 | None:intergenic |
| AGGGAGGTTGATTCATGGGT+TGG | 0.412466 | 6_4:-85430840 | Msa1001580:five_prime_UTR |
| AGAAGTGGTGTTGTTGATGT+TGG | 0.414533 | 6_4:+85431610 | None:intergenic |
| TCCGCATAATGAAGCCGTTT+CGG | 0.415744 | 6_4:+85430539 | None:intergenic |
| AATGAGTCAGATCCATTATT+AGG | 0.415787 | 6_4:+85430281 | None:intergenic |
| GCGGTGGGTGTGGTGGTTGA+GGG | 0.426363 | 6_4:+85431457 | None:intergenic |
| AGGTTATGAGATTGAGAAGA+AGG | 0.426928 | 6_4:+85431536 | None:intergenic |
| TTGACAACAGTTTGCCATAA+GGG | 0.428457 | 6_4:+85431136 | None:intergenic |
| GCTGCTACTTACTTCTGGCC+TGG | 0.438220 | 6_4:-85431100 | Msa1001580:five_prime_UTR |
| CCAAGAGTGATGTGATGCTC+AGG | 0.438489 | 6_4:-85430168 | Msa1001580:five_prime_UTR |
| ATCGAGTATTATTAAGCCTT+CGG | 0.441812 | 6_4:+85430239 | None:intergenic |
| CTTACTTCCACTTCTATAGA+GGG | 0.442153 | 6_4:-85422878 | Msa1001580:CDS |
| CTTCCAATGCGGTTAGACTC+TGG | 0.443026 | 6_4:+85421719 | None:intergenic |
| TCATGAACCAACCCAATAAT+CGG | 0.445223 | 6_4:+85430500 | None:intergenic |
| AGTTTGGGGAAGGTTGAGAA+TGG | 0.445747 | 6_4:-85430596 | Msa1001580:five_prime_UTR |
| CCTGAGCATCACATCACTCT+TGG | 0.445887 | 6_4:+85430168 | None:intergenic |
| CCTCTATAGAAGTGGAAGTA+AGG | 0.448444 | 6_4:+85422879 | None:intergenic |
| ACTTGATGACCTTGATGATC+AGG | 0.450409 | 6_4:+85430917 | None:intergenic |
| AGAGTCTGCTGGCTTATCCT+TGG | 0.450801 | 6_4:+85421796 | None:intergenic |
| TGAGGATGACAGTGGGGTGG+TGG | 0.451246 | 6_4:+85431416 | None:intergenic |
| TGAAGGAAGATTTGCCGAAA+CGG | 0.455883 | 6_4:-85430553 | Msa1001580:five_prime_UTR |
| GTGATAAGACGGTGGATGTT+GGG | 0.455917 | 6_4:+85431346 | None:intergenic |
| GAAGCATGAAAAGATGTTGC+AGG | 0.457258 | 6_4:-85430140 | Msa1001580:five_prime_UTR |
| GAGTCTGCTGGCTTATCCTT+GGG | 0.463951 | 6_4:+85421797 | None:intergenic |
| ATTATAGGGAGGTTGATTCA+TGG | 0.464528 | 6_4:-85430845 | Msa1001580:five_prime_UTR |
| TTATTCGTCGGCTGATGTTG+TGG | 0.473602 | 6_4:-85430639 | Msa1001580:five_prime_UTR |
| GTTGACAACAGTTTGCCATA+AGG | 0.475997 | 6_4:+85431135 | None:intergenic |
| TTCCAATGCGGTTAGACTCT+GGG | 0.479230 | 6_4:+85421720 | None:intergenic |
| TATGGTTGGTGATCATGGTA+TGG | 0.483283 | 6_4:-85430783 | Msa1001580:five_prime_UTR |
| AAGTGAGAGTTGGGAAAACT+GGG | 0.486140 | 6_4:+85431293 | None:intergenic |
| ATGCAGCATTGGTCCGCCTA+AGG | 0.490466 | 6_4:-85421855 | Msa1001580:CDS |
| CTTTGAGGAAAACAATTTCA+GGG | 0.490623 | 6_4:+85422955 | None:intergenic |
| GCTTAATAATACTCGATGTT+CGG | 0.493640 | 6_4:-85430233 | Msa1001580:five_prime_UTR |
| GTTTGGGGAAGGTTGAGAAT+GGG | 0.494549 | 6_4:-85430595 | Msa1001580:five_prime_UTR |
| TGACAATGGAGTAATGGTTA+GGG | 0.495557 | 6_4:+85431269 | None:intergenic |
| TTTGGATCTTGATGATATAC+CGG | 0.499190 | 6_4:-85430966 | Msa1001580:five_prime_UTR |
| GTTATAAGGTGGAGCAGAGT+AGG | 0.499321 | 6_4:-85430475 | Msa1001580:five_prime_UTR |
| ATTGGTCCGCCTAAGGGAAT+CGG | 0.499471 | 6_4:-85421848 | Msa1001580:CDS |
| AAGGTGGAGCAGAGTAGGAC+GGG | 0.499545 | 6_4:-85430470 | Msa1001580:five_prime_UTR |
| TGAGTAACCTCATCATCATC+AGG | 0.501035 | 6_4:+85430890 | None:intergenic |
| ATCGAGCTGTGTTATGCGTC+TGG | 0.501571 | 6_4:+85421876 | None:intergenic |
| TGGTTAGGGAAAGTGAGAGT+TGG | 0.505972 | 6_4:+85431283 | None:intergenic |
| CTCCCAGAGTCTAACCGCAT+TGG | 0.507654 | 6_4:-85421722 | Msa1001580:three_prime_UTR |
| TTATAGGGAGGTTGATTCAT+GGG | 0.508829 | 6_4:-85430844 | Msa1001580:five_prime_UTR |
| CCACTTCTATAGAGGGGCTG+AGG | 0.508877 | 6_4:-85422871 | Msa1001580:CDS |
| TGAATGAAGGGTTGAGTTTG+GGG | 0.511092 | 6_4:-85430610 | Msa1001580:five_prime_UTR |
| AGGTTACTCAAGCTGTTGCT+AGG | 0.512596 | 6_4:-85430877 | Msa1001580:five_prime_UTR |
| GTGGTGAGAGAGAGAAGAAG+AGG | 0.513329 | 6_4:+85431479 | None:intergenic |
| GTCATCCTCATCTCTTCTGA+CGG | 0.514335 | 6_4:-85431403 | Msa1001580:five_prime_UTR |
| CATGAATCAAAATGGTGGCT+TGG | 0.515002 | 6_4:-85431163 | Msa1001580:five_prime_UTR |
| ACGGTGGATGTTGGGAGTTG+AGG | 0.517446 | 6_4:+85431354 | None:intergenic |
| TTTGAGGATCCTGATCATCA+AGG | 0.519126 | 6_4:-85430926 | Msa1001580:five_prime_UTR |
| GATTCCACCGATTATTGGGT+TGG | 0.520037 | 6_4:-85430507 | Msa1001580:five_prime_UTR |
| GATTATTGGGTTGGTTCATG+AGG | 0.520952 | 6_4:-85430498 | Msa1001580:five_prime_UTR |
| CACTTCTATAGAGGGGCTGA+GGG | 0.521225 | 6_4:-85422870 | Msa1001580:CDS |
| ATGAGATTGAGAAGAAGGGT+TGG | 0.526407 | 6_4:+85431541 | None:intergenic |
| GCAATCTGTTCTTCTACCGA+AGG | 0.526490 | 6_4:-85430255 | Msa1001580:five_prime_UTR |
| GAGTGAATGTCAATCATGTT+TGG | 0.528243 | 6_4:+85424078 | None:intergenic |
| ATCCACCGTCTTATCACAAA+CGG | 0.529434 | 6_4:-85431340 | Msa1001580:five_prime_UTR |
| TGAGAATGGGAATAAGTTGA+AGG | 0.532449 | 6_4:-85430582 | Msa1001580:five_prime_UTR |
| AAGCTGTTGCTAGGATTGAT+GGG | 0.532848 | 6_4:-85430868 | Msa1001580:five_prime_UTR |
| TCTAACCGCATTGGAAGCTA+TGG | 0.532952 | 6_4:-85421713 | Msa1001580:three_prime_UTR |
| GATTATCAAACAGAGTCTGC+TGG | 0.534247 | 6_4:+85421785 | None:intergenic |
| TGAAACTTCATCTGCTCCCA+AGG | 0.534364 | 6_4:-85421813 | Msa1001580:CDS |
| TTACTTCTGGCCTGGCTCTG+AGG | 0.536814 | 6_4:-85431092 | Msa1001580:five_prime_UTR |
| AACACAGCTCGATGCAGCAT+TGG | 0.540627 | 6_4:-85421866 | Msa1001580:CDS |
| GCCGAAACGGCTTCATTATG+CGG | 0.541273 | 6_4:-85430540 | Msa1001580:five_prime_UTR |
| AACCATTACTCCATTGTCAC+TGG | 0.546056 | 6_4:-85431265 | Msa1001580:five_prime_UTR |
| ATCTCAACATTCTCAAACGA+AGG | 0.547169 | 6_4:+85430344 | None:intergenic |
| TGAAGGGTTGAGTTTGGGGA+AGG | 0.548240 | 6_4:-85430606 | Msa1001580:five_prime_UTR |
| CCTCAGCCCCTCTATAGAAG+TGG | 0.549795 | 6_4:+85422871 | None:intergenic |
| GGTTATGAGATTGAGAAGAA+GGG | 0.551055 | 6_4:+85431537 | None:intergenic |
| CATGGTCCTCAATTTGAAAG+AGG | 0.552265 | 6_4:-85430377 | Msa1001580:five_prime_UTR |
| AGGGTAGAGACCAGTGACAA+TGG | 0.554384 | 6_4:+85431255 | None:intergenic |
| GGCAGTGATGAGTGACATGC+AGG | 0.555889 | 6_4:+85431516 | None:intergenic |
| TGCAGCATTGGTCCGCCTAA+GGG | 0.557737 | 6_4:-85421854 | Msa1001580:CDS |
| GTTGGTGATCATGGTATGGT+TGG | 0.558511 | 6_4:-85430779 | Msa1001580:five_prime_UTR |
| GGCGGCCAAATTGCAAGCAA+AGG | 0.558786 | 6_4:+85430674 | None:intergenic |
| TTGTTAATGTTGTTGAGAAG+TGG | 0.560518 | 6_4:+85431595 | None:intergenic |
| AAAGAGTGTGGTGGTGCTCA+TGG | 0.563947 | 6_4:-85430443 | Msa1001580:five_prime_UTR |
| CAGAAAGACTTATGATGTGA+AGG | 0.564163 | 6_4:-85421688 | Msa1001580:three_prime_UTR |
| GATGTTAGTATTATTATGGT+TGG | 0.566418 | 6_4:-85430797 | Msa1001580:five_prime_UTR |
| GACCAGTGACAATGGAGTAA+TGG | 0.567470 | 6_4:+85431263 | None:intergenic |
| GAAGAGATGAGGATGACAGT+GGG | 0.568721 | 6_4:+85431409 | None:intergenic |
| TGTGATAAGACGGTGGATGT+TGG | 0.568924 | 6_4:+85431345 | None:intergenic |
| AACGGTACAGAAGCTCTCAC+TGG | 0.568968 | 6_4:-85431322 | Msa1001580:five_prime_UTR |
| GATCATCAAGGTCATCAAGT+TGG | 0.571204 | 6_4:-85430914 | Msa1001580:five_prime_UTR |
| CTGTACCGTTTGTGATAAGA+CGG | 0.576499 | 6_4:+85431335 | None:intergenic |
| ACTTATAAGCTGTAGATGCA+TGG | 0.577808 | 6_4:+85421749 | None:intergenic |
| TTACTTCCACTTCTATAGAG+GGG | 0.580890 | 6_4:-85422877 | Msa1001580:CDS |
| ATTATTGGGTTGGTTCATGA+GGG | 0.581277 | 6_4:-85430497 | Msa1001580:five_prime_UTR |
| GAAGAGGAGAGAGAAAGTGA+TGG | 0.581885 | 6_4:+85431495 | None:intergenic |
| TTGCCGAGCATTATTCCCCA+AGG | 0.587200 | 6_4:-85423974 | Msa1001580:intron |
| GTACCTTGGGGAATAATGCT+CGG | 0.591191 | 6_4:+85423971 | None:intergenic |
| ATAAGCTGTAGATGCATGGA+TGG | 0.593174 | 6_4:+85421753 | None:intergenic |
| AACTGGCCAGCCGAAATGGT+GGG | 0.593234 | 6_4:-85424112 | Msa1001580:five_prime_UTR |
| TTGATGATACCATGGTAAGG+AGG | 0.593346 | 6_4:+85431235 | None:intergenic |
| GTTGTGGCGAAGATGAATGA+AGG | 0.593970 | 6_4:-85430623 | Msa1001580:five_prime_UTR |
| AAACTGGCCAGCCGAAATGG+TGG | 0.595215 | 6_4:-85424113 | Msa1001580:five_prime_UTR |
| AGGACGGGGAAGAAAGAGTG+TGG | 0.596045 | 6_4:-85430455 | Msa1001580:five_prime_UTR |
| GGTTCATGAGGGTTATAAGG+TGG | 0.598108 | 6_4:-85430486 | Msa1001580:five_prime_UTR |
| GGATTGATGGGATTATAGGG+AGG | 0.598150 | 6_4:-85430856 | Msa1001580:five_prime_UTR |
| AAGAATCAAGCAATAACAAG+TGG | 0.600374 | 6_4:+85421504 | None:intergenic |
| TTGTTGATGATACCATGGTA+AGG | 0.602580 | 6_4:+85431232 | None:intergenic |
| AACAAAAGAATCTCCAAACA+TGG | 0.603657 | 6_4:-85431671 | Msa1001580:five_prime_UTR |
| TAAGGTGGAGCAGAGTAGGA+CGG | 0.610796 | 6_4:-85430471 | Msa1001580:five_prime_UTR |
| ATGGTCCTCAATTTGAAAGA+GGG | 0.614205 | 6_4:-85430376 | Msa1001580:five_prime_UTR |
| GGTCTCTACCCTCCTTACCA+TGG | 0.618911 | 6_4:-85431244 | Msa1001580:five_prime_UTR |
| GAATGCTTTGAGTCAAGCTG+AGG | 0.620265 | 6_4:-85424040 | Msa1001580:CDS |
| CAAGAGTGATGTGATGCTCA+GGG | 0.624376 | 6_4:-85430167 | Msa1001580:five_prime_UTR |
| TGATGATACCATGGTAAGGA+GGG | 0.624643 | 6_4:+85431236 | None:intergenic |
| AGAAGTTGTTGATGATACCA+TGG | 0.625231 | 6_4:+85431227 | None:intergenic |
| AGCATTCAGAAATTCTTGTG+TGG | 0.631319 | 6_4:+85424056 | None:intergenic |
| ACCAAATCACCGATTCCCTT+AGG | 0.635937 | 6_4:+85421839 | None:intergenic |
| GACGAATAATTAAAATCACT+CGG | 0.636737 | 6_4:+85430653 | None:intergenic |
| AGATGAGGATGACAGTGGGG+TGG | 0.638918 | 6_4:+85431413 | None:intergenic |
| GGAAACCGTCAGAAGAGATG+AGG | 0.642188 | 6_4:+85431398 | None:intergenic |
| AGCTGTAGATGCATGGATGG+AGG | 0.651778 | 6_4:+85421756 | None:intergenic |
| TGAACCAACCCAATAATCGG+TGG | 0.652895 | 6_4:+85430503 | None:intergenic |
| AGGTGGAGCAGAGTAGGACG+GGG | 0.654013 | 6_4:-85430469 | Msa1001580:five_prime_UTR |
| AGAAGAGATGAGGATGACAG+TGG | 0.662028 | 6_4:+85431408 | None:intergenic |
| TTGTGGCGAAGATGAATGAA+GGG | 0.666198 | 6_4:-85430622 | Msa1001580:five_prime_UTR |
| TGGCAAACTGTTGTCAACAG+TGG | 0.670869 | 6_4:-85431130 | Msa1001580:five_prime_UTR |
| TTCGGTAGAAGAACAGATTG+CGG | 0.673389 | 6_4:+85430257 | None:intergenic |
| AGTTGGTCCTGATGATGATG+AGG | 0.679762 | 6_4:-85430897 | Msa1001580:five_prime_UTR |
| CTAGCCATGAATCAAAATGG+TGG | 0.682089 | 6_4:-85431168 | Msa1001580:five_prime_UTR |
| ACTTCTATAGAGGGGCTGAG+GGG | 0.695324 | 6_4:-85422869 | Msa1001580:CDS |
| AAATCACCGATTCCCTTAGG+CGG | 0.696724 | 6_4:+85421842 | None:intergenic |
| AAGAGATGAGGATGACAGTG+GGG | 0.704754 | 6_4:+85431410 | None:intergenic |
| ACGGGGAAGAAAGAGTGTGG+TGG | 0.712377 | 6_4:-85430452 | Msa1001580:five_prime_UTR |
| CTGGACCATAGCTTCCAATG+CGG | 0.738061 | 6_4:+85421708 | None:intergenic |
| TACCGTTTGTGATAAGACGG+TGG | 0.741321 | 6_4:+85431338 | None:intergenic |
| GAATAATTAAAATCACTCGG+CGG | 0.781251 | 6_4:+85430656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATGAAATAATAAAAAG+AGG | + | chr6_4:85423269-85423288 | None:intergenic | 10.0% |
| !!! | TTTGAAATTTTATTATGTTT+TGG | - | chr6_4:85423585-85423604 | Msa1001580:intron | 10.0% |
| !!! | ATTAAAATTTTCTATTTACA+GGG | - | chr6_4:85423656-85423675 | Msa1001580:intron | 10.0% |
| !! | AATTATGAAATAAATAAAAC+AGG | - | chr6_4:85424051-85424070 | Msa1001580:CDS | 10.0% |
| !! | ATTATGAAATAAATAAAACA+GGG | - | chr6_4:85424052-85424071 | Msa1001580:CDS | 10.0% |
| !! | AAAATGGTAAAAAAAATAAT+TGG | - | chr6_4:85426727-85426746 | Msa1001580:intron | 10.0% |
| !! | ATAAAAAATTTAGTTAAGTT+TGG | + | chr6_4:85427684-85427703 | None:intergenic | 10.0% |
| !! | AAAAACATAAATAAACTAAT+AGG | - | chr6_4:85427724-85427743 | Msa1001580:intron | 10.0% |
| !! | ATAATAACAATAATAAAAAG+GGG | + | chr6_4:85428188-85428207 | None:intergenic | 10.0% |
| !! | TATAACATAATTAAAAAAAG+GGG | + | chr6_4:85428261-85428280 | None:intergenic | 10.0% |
| !! | AAAACTAAAGCAAATTAAAT+CGG | + | chr6_4:85423222-85423241 | None:intergenic | 15.0% |
| !!! | GATTAAAATTTTCTATTTAC+AGG | - | chr6_4:85423655-85423674 | Msa1001580:intron | 15.0% |
| !! | TTAAAAAAATAGATATGAAG+CGG | + | chr6_4:85423949-85423968 | None:intergenic | 15.0% |
| !! | TTATGAAATAAATAAAACAG+GGG | - | chr6_4:85424053-85424072 | Msa1001580:CDS | 15.0% |
| !!! | AATATATGAATATGTCATTT+TGG | - | chr6_4:85424611-85424630 | Msa1001580:intron | 15.0% |
| !! | TGTTTATAAGTTATAACATA+TGG | + | chr6_4:85425057-85425076 | None:intergenic | 15.0% |
| !! | AAAACCAAAGAAAATTAAAT+TGG | + | chr6_4:85425396-85425415 | None:intergenic | 15.0% |
| !! | GAAATTATGAAATAATAAAG+AGG | + | chr6_4:85425440-85425459 | None:intergenic | 15.0% |
| !!! | CATAATTTGAGTTATATAAA+TGG | + | chr6_4:85425492-85425511 | None:intergenic | 15.0% |
| !! | AAATGTATTAATTATCAGTT+TGG | - | chr6_4:85425727-85425746 | Msa1001580:intron | 15.0% |
| !!! | TTTATTTTCATTTCATTTCA+TGG | + | chr6_4:85425842-85425861 | None:intergenic | 15.0% |
| !!! | AGAAGTATAATTAGTTTTTT+TGG | - | chr6_4:85426533-85426552 | Msa1001580:intron | 15.0% |
| !! | TATCGTTTATTGTAAAAAAA+CGG | + | chr6_4:85426708-85426727 | None:intergenic | 15.0% |
| !!! | TTTTACAATAAACGATAAAA+TGG | - | chr6_4:85426711-85426730 | Msa1001580:intron | 15.0% |
| !! | TGTTGAAAATCTTATAATAA+AGG | - | chr6_4:85427452-85427471 | Msa1001580:intron | 15.0% |
| !! | ATAAATAAACTAATAGGTAT+AGG | - | chr6_4:85427730-85427749 | Msa1001580:intron | 15.0% |
| !!! | AACCAAAAAAATATCTATTT+TGG | - | chr6_4:85427785-85427804 | Msa1001580:intron | 15.0% |
| !!! | AACCAAAATAGATATTTTTT+TGG | + | chr6_4:85427790-85427809 | None:intergenic | 15.0% |
| !!! | GTGAAATAAGTTAATTATTT+TGG | - | chr6_4:85428981-85429000 | Msa1001580:intron | 15.0% |
| !!! | GTTAATTATTTTGGAAAAAA+TGG | - | chr6_4:85428990-85429009 | Msa1001580:intron | 15.0% |
| !!! | TAGTTATTGTTGAATTTTAT+GGG | - | chr6_4:85429170-85429189 | Msa1001580:intron | 15.0% |
| !! | TGTAATGAAAATAAATGATT+GGG | - | chr6_4:85429714-85429733 | Msa1001580:intron | 15.0% |
| !!! | TGAATAGAATATTTTTATTC+AGG | + | chr6_4:85430062-85430081 | None:intergenic | 15.0% |
| !!! | TTTTTCGAAATTTTTATGAA+TGG | - | chr6_4:85430508-85430527 | Msa1001580:five_prime_UTR | 15.0% |
| !!! | TTTTCGAAATTTTTATGAAT+GGG | - | chr6_4:85430509-85430528 | Msa1001580:five_prime_UTR | 15.0% |
| !! | AAAATCTATTAAAACTACAT+TGG | - | chr6_4:85430912-85430931 | Msa1001580:five_prime_UTR | 15.0% |
| !! | ATACATTAACAATAATCTAA+TGG | - | chr6_4:85431241-85431260 | Msa1001580:five_prime_UTR | 15.0% |
| !! | ATTACAGTTTCAAAAAATAA+AGG | - | chr6_4:85431275-85431294 | Msa1001580:five_prime_UTR | 15.0% |
| !!! | AAGTATTGTAAGCATTATAA+TGG | - | chr6_4:85422144-85422163 | Msa1001580:intron | 20.0% |
| !!! | TGTTTTAGAGTATTTTGATT+TGG | - | chr6_4:85422197-85422216 | Msa1001580:intron | 20.0% |
| !!! | TTAACTTTTTGTATCAATGA+TGG | - | chr6_4:85423147-85423166 | Msa1001580:intron | 20.0% |
| !!! | ATCAATGATGGATAAAAAAT+AGG | - | chr6_4:85423159-85423178 | Msa1001580:intron | 20.0% |
| !! | ATAAAATTTCAAACTGAACT+AGG | + | chr6_4:85423578-85423597 | None:intergenic | 20.0% |
| !!! | TTTATTATGTTTTGGATCAT+CGG | - | chr6_4:85423593-85423612 | Msa1001580:intron | 20.0% |
| !! | TAATATTGATCAGAAAACAT+GGG | - | chr6_4:85423733-85423752 | Msa1001580:intron | 20.0% |
| !! | CGAATTATATGATAATAACA+TGG | + | chr6_4:85423843-85423862 | None:intergenic | 20.0% |
| !!! | AAATAAAATGAAAGTACTCA+TGG | - | chr6_4:85423878-85423897 | Msa1001580:intron | 20.0% |
| !!! | AATAAAATGAAAGTACTCAT+GGG | - | chr6_4:85423879-85423898 | Msa1001580:intron | 20.0% |
| !! | TATGAAATAAATAAAACAGG+GGG | - | chr6_4:85424054-85424073 | Msa1001580:CDS | 20.0% |
| !! | ATGAGAAAGAAAAGAAAATA+AGG | + | chr6_4:85424093-85424112 | None:intergenic | 20.0% |
| !! | GGAAAATATTCAAAATACAA+AGG | - | chr6_4:85424678-85424697 | Msa1001580:intron | 20.0% |
| !!! | GTTTCAAGACAATAATTTTA+GGG | - | chr6_4:85424961-85424980 | Msa1001580:intron | 20.0% |
| !!! | TCTTTTAACACATGAAAATA+TGG | + | chr6_4:85425575-85425594 | None:intergenic | 20.0% |
| !! | ATATAAAAATTCCTATTTGC+AGG | - | chr6_4:85425653-85425672 | Msa1001580:intron | 20.0% |
| !! | TATAAAAATTCCTATTTGCA+GGG | - | chr6_4:85425654-85425673 | Msa1001580:intron | 20.0% |
| !! | AAATAAAATGAAAGAACTGA+TGG | - | chr6_4:85425855-85425874 | Msa1001580:intron | 20.0% |
| !! | AATAAAATGAAAGAACTGAT+GGG | - | chr6_4:85425856-85425875 | Msa1001580:intron | 20.0% |
| !! | ATATACATCAAGAATCAAAT+TGG | - | chr6_4:85425928-85425947 | Msa1001580:intron | 20.0% |
| !!! | ATAATTGATAATACTCACAT+TGG | - | chr6_4:85426274-85426293 | Msa1001580:intron | 20.0% |
| !!! | AATCACTTTTATATTTTCTG+TGG | + | chr6_4:85426485-85426504 | None:intergenic | 20.0% |
| !! | TTTCATTTGTTTAACACAAA+AGG | + | chr6_4:85426602-85426621 | None:intergenic | 20.0% |
| !!! | AATACAAGGGTATTAATAAA+AGG | + | chr6_4:85427431-85427450 | None:intergenic | 20.0% |
| !!! | AGATTTTCAACAAAATACAA+GGG | + | chr6_4:85427444-85427463 | None:intergenic | 20.0% |
| !!! | AAGATTTTCAACAAAATACA+AGG | + | chr6_4:85427445-85427464 | None:intergenic | 20.0% |
| !!! | AGGAAATAAGATTTTTTTTG+TGG | - | chr6_4:85427479-85427498 | Msa1001580:intron | 20.0% |
| !! | ATAAGATGTTGAAACATATA+AGG | - | chr6_4:85427582-85427601 | Msa1001580:intron | 20.0% |
| !! | TATTATCGGATAATCTTTAA+AGG | - | chr6_4:85427621-85427640 | Msa1001580:intron | 20.0% |
| !!! | ATATTTTTTTGGTTGCTTTT+TGG | + | chr6_4:85427779-85427798 | None:intergenic | 20.0% |
| !!! | TTACATTTTTTTGCATGATT+AGG | - | chr6_4:85428210-85428229 | Msa1001580:intron | 20.0% |
| !! | TCTACTAAATACTACAAAAT+TGG | + | chr6_4:85428779-85428798 | None:intergenic | 20.0% |
| !!! | GTTTTTACTTTATGTCTTTT+AGG | - | chr6_4:85428837-85428856 | Msa1001580:intron | 20.0% |
| !! | ATAAGTTTATTATCCAAACA+GGG | + | chr6_4:85428927-85428946 | None:intergenic | 20.0% |
| !! | AATAAGTTTATTATCCAAAC+AGG | + | chr6_4:85428928-85428947 | None:intergenic | 20.0% |
| !! | TAAACTTATTTGTAGCTTAT+AGG | - | chr6_4:85428938-85428957 | Msa1001580:intron | 20.0% |
| !! | AAAAATGGTTAAATAACTCT+TGG | - | chr6_4:85429005-85429024 | Msa1001580:intron | 20.0% |
| !!! | CTAGTTATTGTTGAATTTTA+TGG | - | chr6_4:85429169-85429188 | Msa1001580:intron | 20.0% |
| !! | ACTAAAACATGAATTTGAAT+AGG | - | chr6_4:85429531-85429550 | Msa1001580:intron | 20.0% |
| !! | GAGTTTATACTTATTAGAAA+GGG | - | chr6_4:85429566-85429585 | Msa1001580:intron | 20.0% |
| !! | AGTTTATACTTATTAGAAAG+GGG | - | chr6_4:85429567-85429586 | Msa1001580:intron | 20.0% |
| !!! | ATTTGACAAATATGTTTTGA+AGG | + | chr6_4:85429629-85429648 | None:intergenic | 20.0% |
| !! | CTGTAATGAAAATAAATGAT+TGG | - | chr6_4:85429713-85429732 | Msa1001580:intron | 20.0% |
| !! | GTAATGAAAATAAATGATTG+GGG | - | chr6_4:85429715-85429734 | Msa1001580:intron | 20.0% |
| !! | TTATTGAATAAATCTTTCCA+TGG | - | chr6_4:85429824-85429843 | Msa1001580:intron | 20.0% |
| !! | TTGATTGACTAATTATTATC+AGG | - | chr6_4:85430006-85430025 | Msa1001580:intron | 20.0% |
| !! | AATTATTATCAGGATAATAC+AGG | - | chr6_4:85430016-85430035 | Msa1001580:intron | 20.0% |
| !! | ATTATTATCAGGATAATACA+GGG | - | chr6_4:85430017-85430036 | Msa1001580:intron | 20.0% |
| !! | ATATATGATATTGTTTAGCA+AGG | + | chr6_4:85430701-85430720 | None:intergenic | 20.0% |
| !! | AAAGTGAAAAACAATTTCTT+AGG | - | chr6_4:85430850-85430869 | Msa1001580:five_prime_UTR | 20.0% |
| !! | TATTAATTAGATGGTAGAAT+TGG | - | chr6_4:85430887-85430906 | Msa1001580:five_prime_UTR | 20.0% |
| !! | ATAATACATATTTGAGTGTT+TGG | - | chr6_4:85431068-85431087 | Msa1001580:five_prime_UTR | 20.0% |
| !!! | ACTTTTTTAGTTTCCATGTT+TGG | + | chr6_4:85421526-85421545 | None:intergenic | 25.0% |
| !! | AAATAAAGCGTCATAAAAAC+CGG | + | chr6_4:85422237-85422256 | None:intergenic | 25.0% |
| !!! | TTTTATGACGCTTTATTTTG+AGG | - | chr6_4:85422239-85422258 | Msa1001580:intron | 25.0% |
| ! | TGAGGATGTTAGTATTATTA+TGG | - | chr6_4:85422380-85422399 | Msa1001580:intron | 25.0% |
| ! | GATGTTAGTATTATTATGGT+TGG | - | chr6_4:85422384-85422403 | Msa1001580:intron | 25.0% |
| !!! | TTTTAGATGATTTAGCTTCT+TGG | - | chr6_4:85422448-85422467 | Msa1001580:intron | 25.0% |
| !! | TTTAGATGATTTAGCTTCTT+GGG | - | chr6_4:85422449-85422468 | Msa1001580:intron | 25.0% |
| ! | GGTTGAAATTAAATCGAATT+GGG | - | chr6_4:85422470-85422489 | Msa1001580:intron | 25.0% |
| ! | GACGAATAATTAAAATCACT+CGG | + | chr6_4:85422531-85422550 | None:intergenic | 25.0% |
| !!! | GAGTGATTTTAATTATTCGT+CGG | - | chr6_4:85422530-85422549 | Msa1001580:intron | 25.0% |
| !! | ATAATGAGTTTTTCTCTATG+AGG | - | chr6_4:85422766-85422785 | Msa1001580:intron | 25.0% |
| !!! | TCTATGAGGACTATTTTTAT+TGG | - | chr6_4:85422780-85422799 | Msa1001580:intron | 25.0% |
| ! | ACTTCTATACTCAACATAAA+TGG | - | chr6_4:85422873-85422892 | Msa1001580:CDS | 25.0% |
| ! | TATAGAAGGAACATTTCTTT+CGG | - | chr6_4:85423450-85423469 | Msa1001580:intron | 25.0% |
| ! | TGATATGCCAAATTTAAAGA+GGG | + | chr6_4:85423504-85423523 | None:intergenic | 25.0% |
| ! | TTTAGTAATCAAACCATAGA+CGG | - | chr6_4:85423633-85423652 | Msa1001580:intron | 25.0% |
| !!! | AGAAAATTTTAATCCGTCTA+TGG | + | chr6_4:85423649-85423668 | None:intergenic | 25.0% |
| ! | GTAATATTGATCAGAAAACA+TGG | - | chr6_4:85423732-85423751 | Msa1001580:intron | 25.0% |
| !!! | ATATTTTCATTCTAGTTCTC+AGG | - | chr6_4:85423784-85423803 | Msa1001580:intron | 25.0% |
| ! | GTTTCAGACAAATAAACTAT+AGG | + | chr6_4:85423923-85423942 | None:intergenic | 25.0% |
| ! | ATGAAATAAATAAAACAGGG+GGG | - | chr6_4:85424055-85424074 | Msa1001580:CDS | 25.0% |
| ! | GAAAGAAAAGAAAATAAGGA+AGG | + | chr6_4:85424089-85424108 | None:intergenic | 25.0% |
| ! | ATGTTGAATCAGATTATTTG+CGG | - | chr6_4:85424549-85424568 | Msa1001580:intron | 25.0% |
| ! | CATAAGCAAGATTAAAATCT+TGG | - | chr6_4:85424657-85424676 | Msa1001580:intron | 25.0% |
| !!! | GTTTTAAGTGAAAGTCAATT+TGG | - | chr6_4:85424729-85424748 | Msa1001580:intron | 25.0% |
| ! | AACGTAACTGAAAAATACTA+AGG | + | chr6_4:85424889-85424908 | None:intergenic | 25.0% |
| !!! | GTTGTTTTTCAGTTATGATT+TGG | - | chr6_4:85424939-85424958 | Msa1001580:intron | 25.0% |
| !! | GGTTTCAAGACAATAATTTT+AGG | - | chr6_4:85424960-85424979 | Msa1001580:intron | 25.0% |
| ! | ATAATATGAAGCTGATGTAT+TGG | + | chr6_4:85425094-85425113 | None:intergenic | 25.0% |
| !!! | GCATTCTGTTGTTTTATAAA+AGG | + | chr6_4:85425128-85425147 | None:intergenic | 25.0% |
| ! | TGCTTTATAAACTCGAAATT+TGG | - | chr6_4:85425145-85425164 | Msa1001580:intron | 25.0% |
| ! | GTAACAGAAATTTATACTGA+AGG | + | chr6_4:85425304-85425323 | None:intergenic | 25.0% |
| !! | TTACATTTTGTATCTGTTGA+TGG | - | chr6_4:85425320-85425339 | Msa1001580:intron | 25.0% |
| ! | TCATATTCTCATATTCTTGT+AGG | - | chr6_4:85425357-85425376 | Msa1001580:intron | 25.0% |
| ! | CCAAAGAAAATTAAATTGGA+GGG | + | chr6_4:85425392-85425411 | None:intergenic | 25.0% |
| ! | ACCAAAGAAAATTAAATTGG+AGG | + | chr6_4:85425393-85425412 | None:intergenic | 25.0% |
| !!! | TCATGTATCATTTTAACATG+AGG | + | chr6_4:85425633-85425652 | None:intergenic | 25.0% |
| ! | TATATACAGTAGTCATTATG+AGG | + | chr6_4:85425913-85425932 | None:intergenic | 25.0% |
| !! | TACATATCTTAGCATTGAAA+GGG | + | chr6_4:85425980-85425999 | None:intergenic | 25.0% |
| !! | ATACATATCTTAGCATTGAA+AGG | + | chr6_4:85425981-85426000 | None:intergenic | 25.0% |
| ! | ATATGTATCACATAACTTAG+AGG | - | chr6_4:85425993-85426012 | Msa1001580:intron | 25.0% |
| ! | AGTCACTAAACTAATTGTTT+AGG | + | chr6_4:85426415-85426434 | None:intergenic | 25.0% |
| !!! | TCAAGTAGCAATATTTTAGA+AGG | - | chr6_4:85426505-85426524 | Msa1001580:intron | 25.0% |
| !!! | CAAGTAGCAATATTTTAGAA+GGG | - | chr6_4:85426506-85426525 | Msa1001580:intron | 25.0% |
| ! | ATTTGTTTAACACAAAAGGA+TGG | + | chr6_4:85426598-85426617 | None:intergenic | 25.0% |
| ! | TTAATGTCTGTCTATTCTTA+AGG | + | chr6_4:85426680-85426699 | None:intergenic | 25.0% |
| ! | TGAATAGACAAGTAAATACA+CGG | - | chr6_4:85427042-85427061 | Msa1001580:intron | 25.0% |
| ! | GCTATTCATGATATCATATA+AGG | - | chr6_4:85427150-85427169 | Msa1001580:intron | 25.0% |
| ! | TATGTTTCTCTCTTATGATA+TGG | - | chr6_4:85427211-85427230 | Msa1001580:intron | 25.0% |
| ! | AATCTTATAATAAAGGCGAA+AGG | - | chr6_4:85427459-85427478 | Msa1001580:intron | 25.0% |
| !! | GTAGGTTCAACTTTTATTAT+CGG | - | chr6_4:85427607-85427626 | Msa1001580:intron | 25.0% |
| ! | TTTGAAGAGAAAAGTAAGTA+AGG | + | chr6_4:85427813-85427832 | None:intergenic | 25.0% |
| !! | ATCTTTTGTGTAAGTGTAAA+TGG | - | chr6_4:85427979-85427998 | Msa1001580:intron | 25.0% |
| ! | AAAAAAAAAGTGACCTTGAA+AGG | + | chr6_4:85428160-85428179 | None:intergenic | 25.0% |
| ! | TCATTGACATTAGTAGTAAT+AGG | - | chr6_4:85428302-85428321 | Msa1001580:intron | 25.0% |
| ! | ACATTAGTAGTAATAGGATT+AGG | - | chr6_4:85428308-85428327 | Msa1001580:intron | 25.0% |
| ! | ACACACATACATGATTAAAA+GGG | + | chr6_4:85428342-85428361 | None:intergenic | 25.0% |
| ! | AACACACATACATGATTAAA+AGG | + | chr6_4:85428343-85428362 | None:intergenic | 25.0% |
| !!! | AGTCTTTTTTCTTGTATGTT+TGG | + | chr6_4:85428642-85428661 | None:intergenic | 25.0% |
| ! | TACAAGAAAAAAGACTTCTT+TGG | - | chr6_4:85428646-85428665 | Msa1001580:intron | 25.0% |
| ! | TAAATACTACAAAATTGGAC+TGG | + | chr6_4:85428774-85428793 | None:intergenic | 25.0% |
| ! | TTACTGATCTATATTGAGTT+TGG | - | chr6_4:85429441-85429460 | Msa1001580:intron | 25.0% |
| !!! | CAAATTCATGTTTTAGTAGA+AGG | + | chr6_4:85429528-85429547 | None:intergenic | 25.0% |
| ! | CGAGTTTATACTTATTAGAA+AGG | - | chr6_4:85429565-85429584 | Msa1001580:intron | 25.0% |
| ! | ATTCAATCAGATATTACTAG+TGG | - | chr6_4:85429647-85429666 | Msa1001580:intron | 25.0% |
| !! | TTTTCATTACAGTCCTTTTA+TGG | + | chr6_4:85429705-85429724 | None:intergenic | 25.0% |
| ! | AAAAATATTCTATTCACTGC+TGG | - | chr6_4:85430066-85430085 | Msa1001580:intron | 25.0% |
| !!! | ACCTGATGTATTTTGTTTAA+TGG | - | chr6_4:85430171-85430190 | Msa1001580:five_prime_UTR | 25.0% |
| !!! | TGTATTTTGTTTAATGGCTT+TGG | - | chr6_4:85430177-85430196 | Msa1001580:five_prime_UTR | 25.0% |
| ! | TCTCATCAAAATTTACTTTG+AGG | + | chr6_4:85430244-85430263 | None:intergenic | 25.0% |
| ! | CTAAATGGTAAAATTTACCT+TGG | + | chr6_4:85430366-85430385 | None:intergenic | 25.0% |
| !! | AAGCAGTAGTTTTTCTTTTT+TGG | - | chr6_4:85430428-85430447 | Msa1001580:five_prime_UTR | 25.0% |
| ! | TGCTCATAGTATTAATTAGA+TGG | - | chr6_4:85430878-85430897 | Msa1001580:five_prime_UTR | 25.0% |
| ! | TAATTCTCTTCAAAACATAG+AGG | - | chr6_4:85430997-85431016 | Msa1001580:five_prime_UTR | 25.0% |
| !! | CTTACATATTTTCCTTGTTA+AGG | - | chr6_4:85431147-85431166 | Msa1001580:five_prime_UTR | 25.0% |
| ! | CATACATTTGTTTCACTATT+AGG | + | chr6_4:85431196-85431215 | None:intergenic | 25.0% |
| ! | ATAGTGAAACAAATGTATGA+TGG | - | chr6_4:85431197-85431216 | Msa1001580:five_prime_UTR | 25.0% |
| AACAAAAGAATCTCCAAACA+TGG | - | chr6_4:85421510-85421529 | Msa1001580:three_prime_UTR | 30.0% | |
| TTGTTAATGTTGTTGAGAAG+TGG | + | chr6_4:85421589-85421608 | None:intergenic | 30.0% | |
| ! | TTTGGATCTTGATGATATAC+CGG | - | chr6_4:85422215-85422234 | Msa1001580:intron | 30.0% |
| !! | ATTATTATGGTTGGTGATCA+TGG | - | chr6_4:85422393-85422412 | Msa1001580:intron | 30.0% |
| GGGTTGAAATTAAATCGAAT+TGG | - | chr6_4:85422469-85422488 | Msa1001580:intron | 30.0% | |
| GAATAATTAAAATCACTCGG+CGG | + | chr6_4:85422528-85422547 | None:intergenic | 30.0% | |
| !!! | TAAGTTGAAGGTGTTTTTGA+AGG | - | chr6_4:85422611-85422630 | Msa1001580:intron | 30.0% |
| !!! | AGGACTATTTTTATTGGACA+TGG | - | chr6_4:85422786-85422805 | Msa1001580:intron | 30.0% |
| AATGAGTCAGATCCATTATT+AGG | + | chr6_4:85422903-85422922 | None:intergenic | 30.0% | |
| ATCGAGTATTATTAAGCCTT+CGG | + | chr6_4:85422945-85422964 | None:intergenic | 30.0% | |
| GCTTAATAATACTCGATGTT+CGG | - | chr6_4:85422948-85422967 | Msa1001580:CDS | 30.0% | |
| !! | AGAAAAAGGTATCTTATACC+TGG | - | chr6_4:85423066-85423085 | Msa1001580:intron | 30.0% |
| AGTAGTTTAATGAATCCTAG+AGG | + | chr6_4:85423108-85423127 | None:intergenic | 30.0% | |
| TTGTATACCTGTATTCTTGT+AGG | - | chr6_4:85423184-85423203 | Msa1001580:intron | 30.0% | |
| GTTTAATCCTACAAGAATAC+AGG | + | chr6_4:85423194-85423213 | None:intergenic | 30.0% | |
| ACTAAAGCAAATTAAATCGG+AGG | + | chr6_4:85423219-85423238 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTCTCGTATCTGT+TGG | - | chr6_4:85423233-85423252 | Msa1001580:intron | 30.0% |
| AGTTATATGTGAACTGCATA+TGG | + | chr6_4:85423315-85423334 | None:intergenic | 30.0% | |
| CAAAAATACGATTTCTGTCA+AGG | - | chr6_4:85423375-85423394 | Msa1001580:intron | 30.0% | |
| ATAACCTAGTGTGATATAGA+AGG | - | chr6_4:85423436-85423455 | Msa1001580:intron | 30.0% | |
| GATATGCCAAATTTAAAGAG+GGG | + | chr6_4:85423503-85423522 | None:intergenic | 30.0% | |
| GTGATATGCCAAATTTAAAG+AGG | + | chr6_4:85423505-85423524 | None:intergenic | 30.0% | |
| GTCTATGGTTTGATTACTAA+AGG | + | chr6_4:85423634-85423653 | None:intergenic | 30.0% | |
| TCAGACAAATAAACTATAGG+AGG | + | chr6_4:85423920-85423939 | None:intergenic | 30.0% | |
| GAACAAAGAAAAAGGAGAAA+TGG | + | chr6_4:85424138-85424157 | None:intergenic | 30.0% | |
| AACAATATGAGGTAGAAGAA+TGG | + | chr6_4:85424188-85424207 | None:intergenic | 30.0% | |
| ! | AATTCATACTCAAGTGCTTT+TGG | - | chr6_4:85424275-85424294 | Msa1001580:intron | 30.0% |
| !!! | TTTTGGATAGAGTTTTGAGT+TGG | - | chr6_4:85424292-85424311 | Msa1001580:intron | 30.0% |
| !!! | TTTGGATAGAGTTTTGAGTT+GGG | - | chr6_4:85424293-85424312 | Msa1001580:intron | 30.0% |
| ! | TTTTAGTGATCCTTGAGATT+TGG | - | chr6_4:85424364-85424383 | Msa1001580:intron | 30.0% |
| !!! | AATATGTCATTTTGGAACTC+TGG | - | chr6_4:85424619-85424638 | Msa1001580:intron | 30.0% |
| TAAGGCAATTTCAACACATT+CGG | + | chr6_4:85424871-85424890 | None:intergenic | 30.0% | |
| AAGTTATAACATATGGCTCA+TGG | + | chr6_4:85425050-85425069 | None:intergenic | 30.0% | |
| !! | AGAAAAAGGTATCATATACC+TGG | - | chr6_4:85425245-85425264 | Msa1001580:intron | 30.0% |
| ! | TTTGTATCTGTTGATGGATA+AGG | - | chr6_4:85425326-85425345 | Msa1001580:intron | 30.0% |
| !! | CCCTCCAATTTAATTTTCTT+TGG | - | chr6_4:85425389-85425408 | Msa1001580:intron | 30.0% |
| AAAATATGGCGATTTAGATG+AGG | + | chr6_4:85425561-85425580 | None:intergenic | 30.0% | |
| TGTTACCATTTGTGATAAAC+TGG | - | chr6_4:85425677-85425696 | Msa1001580:intron | 30.0% | |
| TCTTACCAGTTTATCACAAA+TGG | + | chr6_4:85425685-85425704 | None:intergenic | 30.0% | |
| !! | TAATTCTCATTCTAGTTCTC+AGG | - | chr6_4:85425755-85425774 | Msa1001580:intron | 30.0% |
| ! | CTAATTTTGTGAGAATGACA+TGG | + | chr6_4:85425815-85425834 | None:intergenic | 30.0% |
| TAACTAGTAGCAATTGTCAT+TGG | + | chr6_4:85426126-85426145 | None:intergenic | 30.0% | |
| ATTTGTATGAGTTTGAACAC+CGG | - | chr6_4:85426175-85426194 | Msa1001580:intron | 30.0% | |
| ! | AAGGAAATAAGTTGAAGATC+CGG | + | chr6_4:85426197-85426216 | None:intergenic | 30.0% |
| ! | GTTCAACTAGTTTGAGTTAA+AGG | + | chr6_4:85426216-85426235 | None:intergenic | 30.0% |
| AAAGAATAAGTGTATATGCG+TGG | - | chr6_4:85426817-85426836 | Msa1001580:intron | 30.0% | |
| AAGAATAAGTGTATATGCGT+GGG | - | chr6_4:85426818-85426837 | Msa1001580:intron | 30.0% | |
| TTCATTGAAAAAGAACACCA+TGG | - | chr6_4:85426875-85426894 | Msa1001580:intron | 30.0% | |
| GTGAGATTAAATTGCGTAAT+TGG | - | chr6_4:85426946-85426965 | Msa1001580:intron | 30.0% | |
| TGATGAGAAACTTAATCGAT+GGG | + | chr6_4:85427249-85427268 | None:intergenic | 30.0% | |
| TTAAGTTTCTCATCACGTAA+AGG | - | chr6_4:85427254-85427273 | Msa1001580:intron | 30.0% | |
| GTAAGCTTAACTCAATTGAT+AGG | + | chr6_4:85427547-85427566 | None:intergenic | 30.0% | |
| GTTTCAACATCTTATCAACT+TGG | + | chr6_4:85427577-85427596 | None:intergenic | 30.0% | |
| GTTGAAACATATAAGGTTGT+AGG | - | chr6_4:85427589-85427608 | Msa1001580:intron | 30.0% | |
| AACTAATAGGTATAGGTAGT+TGG | - | chr6_4:85427737-85427756 | Msa1001580:intron | 30.0% | |
| ACTAATAGGTATAGGTAGTT+GGG | - | chr6_4:85427738-85427757 | Msa1001580:intron | 30.0% | |
| GTAAATGCTATGCTATGAAA+AGG | + | chr6_4:85427946-85427965 | None:intergenic | 30.0% | |
| ATAATCCCACATTTGAATCT+TGG | - | chr6_4:85428278-85428297 | Msa1001580:intron | 30.0% | |
| TAATCCCACATTTGAATCTT+GGG | - | chr6_4:85428279-85428298 | Msa1001580:intron | 30.0% | |
| TTAGTAGTAATAGGATTAGG+AGG | - | chr6_4:85428311-85428330 | Msa1001580:intron | 30.0% | |
| !!! | GTGTGTTTTTAAAGTATGTC+TGG | - | chr6_4:85428356-85428375 | Msa1001580:intron | 30.0% |
| GAAGGTAAGTGATTTATGTT+TGG | - | chr6_4:85428438-85428457 | Msa1001580:intron | 30.0% | |
| AGAAAAAAGACTTCTTTGGT+TGG | - | chr6_4:85428650-85428669 | Msa1001580:intron | 30.0% | |
| TAATAGCATCACATCAAAAG+GGG | + | chr6_4:85428702-85428721 | None:intergenic | 30.0% | |
| CTAATAGCATCACATCAAAA+GGG | + | chr6_4:85428703-85428722 | None:intergenic | 30.0% | |
| ACTAATAGCATCACATCAAA+AGG | + | chr6_4:85428704-85428723 | None:intergenic | 30.0% | |
| TAATAACAACAAGCACCAAA+TGG | + | chr6_4:85428901-85428920 | None:intergenic | 30.0% | |
| ! | GTTGTTATTATTACCCTGTT+TGG | - | chr6_4:85428911-85428930 | Msa1001580:intron | 30.0% |
| TCACTTATCATGATGAAAAC+TGG | + | chr6_4:85428965-85428984 | None:intergenic | 30.0% | |
| ! | TTGTTGAATTTTATGGGACT+TGG | - | chr6_4:85429176-85429195 | Msa1001580:intron | 30.0% |
| AAAAAGTAAAAGAGTGAAGG+GGG | + | chr6_4:85429251-85429270 | None:intergenic | 30.0% | |
| CAAAAAGTAAAAGAGTGAAG+GGG | + | chr6_4:85429252-85429271 | None:intergenic | 30.0% | |
| CCAAAAAGTAAAAGAGTGAA+GGG | + | chr6_4:85429253-85429272 | None:intergenic | 30.0% | |
| TCCAAAAAGTAAAAGAGTGA+AGG | + | chr6_4:85429254-85429273 | None:intergenic | 30.0% | |
| ATGCAATGAAATACTACCAA+GGG | + | chr6_4:85429297-85429316 | None:intergenic | 30.0% | |
| CTTTACCACTTGTTTAGTTA+TGG | + | chr6_4:85429322-85429341 | None:intergenic | 30.0% | |
| TAGTTCAGTAATTAAGACAC+TGG | + | chr6_4:85429396-85429415 | None:intergenic | 30.0% | |
| TAGATCAGTAATTAAGACAC+TGG | + | chr6_4:85429432-85429451 | None:intergenic | 30.0% | |
| ATGTTACGAATTTACTAACC+TGG | - | chr6_4:85429470-85429489 | Msa1001580:intron | 30.0% | |
| TACATCAAATGTGATCAACA+TGG | - | chr6_4:85429740-85429759 | Msa1001580:intron | 30.0% | |
| ATGTGATCAACATGGATAAA+AGG | - | chr6_4:85429748-85429767 | Msa1001580:intron | 30.0% | |
| ! | TTAGAAGTCTTTGACCATTT+TGG | - | chr6_4:85429855-85429874 | Msa1001580:intron | 30.0% |
| ATCATGGATGAAAACCAAAA+TGG | + | chr6_4:85429872-85429891 | None:intergenic | 30.0% | |
| TTGTGTAGTAGTCTTTATCA+TGG | + | chr6_4:85429888-85429907 | None:intergenic | 30.0% | |
| ATGATAAAGACTACTACACA+AGG | - | chr6_4:85429887-85429906 | Msa1001580:intron | 30.0% | |
| AAACAAAATACATCAGGTAC+AGG | + | chr6_4:85430169-85430188 | None:intergenic | 30.0% | |
| GCCATTAAACAAAATACATC+AGG | + | chr6_4:85430175-85430194 | None:intergenic | 30.0% | |
| ! | CTTTGAGGAAAACAATTTCA+GGG | + | chr6_4:85430229-85430248 | None:intergenic | 30.0% |
| ! | ACTTTGAGGAAAACAATTTC+AGG | + | chr6_4:85430230-85430249 | None:intergenic | 30.0% |
| ! | TTAGCTTGAACAGAACTAAA+TGG | + | chr6_4:85430381-85430400 | None:intergenic | 30.0% |
| TAGTATAGTGAGTATTATGC+TGG | - | chr6_4:85430539-85430558 | Msa1001580:five_prime_UTR | 30.0% | |
| GTTTCGATATAAACATTTCC+TGG | + | chr6_4:85430667-85430686 | None:intergenic | 30.0% | |
| TTAATCTGTGTGAAATGTGA+CGG | + | chr6_4:85430746-85430765 | None:intergenic | 30.0% | |
| AAATGAAAAAGCGAGAATGA+TGG | - | chr6_4:85430777-85430796 | Msa1001580:five_prime_UTR | 30.0% | |
| !!! | TGTTTTGAAGAGAATTATGC+AGG | + | chr6_4:85430994-85431013 | None:intergenic | 30.0% |
| !! | AAGTGGATTATCTAAGTGTA+TGG | - | chr6_4:85431106-85431125 | Msa1001580:five_prime_UTR | 30.0% |
| GAAAACTTCAGTGATATGTT+AGG | - | chr6_4:85431605-85431624 | Msa1001580:five_prime_UTR | 30.0% | |
| AAGAATCAAGCAATAACAAG+TGG | + | chr6_4:85431680-85431699 | None:intergenic | 30.0% | |
| GGTTATGAGATTGAGAAGAA+GGG | + | chr6_4:85421647-85421666 | None:intergenic | 35.0% | |
| AGGTTATGAGATTGAGAAGA+AGG | + | chr6_4:85421648-85421667 | None:intergenic | 35.0% | |
| !!! | TTTTGTGTTGGTAGCCAAAA+CGG | + | chr6_4:85421807-85421826 | None:intergenic | 35.0% |
| TGACAATGGAGTAATGGTTA+GGG | + | chr6_4:85421915-85421934 | None:intergenic | 35.0% | |
| !! | TTGTTGATGATACCATGGTA+AGG | + | chr6_4:85421952-85421971 | None:intergenic | 35.0% |
| !! | AGAAGTTGTTGATGATACCA+TGG | + | chr6_4:85421957-85421976 | None:intergenic | 35.0% |
| !!! | CAACAACTTCTTTTTCGATC+CGG | - | chr6_4:85421966-85421985 | Msa1001580:intron | 35.0% |
| TTGACAACAGTTTGCCATAA+GGG | + | chr6_4:85422048-85422067 | None:intergenic | 35.0% | |
| ! | AAATTGCTGCTACTTACTTC+TGG | - | chr6_4:85422076-85422095 | Msa1001580:intron | 35.0% |
| CTGAGGTAAAAAAAGGTTCT+TGG | - | chr6_4:85422106-85422125 | Msa1001580:intron | 35.0% | |
| CTAGGATTGATGGGATTATA+GGG | - | chr6_4:85422322-85422341 | Msa1001580:intron | 35.0% | |
| ! | ATTATAGGGAGGTTGATTCA+TGG | - | chr6_4:85422336-85422355 | Msa1001580:intron | 35.0% |
| ! | TTATAGGGAGGTTGATTCAT+GGG | - | chr6_4:85422337-85422356 | Msa1001580:intron | 35.0% |
| !! | ATTCATGGGTTGGAAAAAAG+AGG | - | chr6_4:85422351-85422370 | Msa1001580:intron | 35.0% |
| !! | TTCATGGGTTGGAAAAAAGA+GGG | - | chr6_4:85422352-85422371 | Msa1001580:intron | 35.0% |
| ATGAATGAAGGGTTGAGTTT+GGG | - | chr6_4:85422570-85422589 | Msa1001580:intron | 35.0% | |
| ! | TGAGAATGGGAATAAGTTGA+AGG | - | chr6_4:85422599-85422618 | Msa1001580:intron | 35.0% |
| TTCATTATGCGGATAGTGAT+AGG | - | chr6_4:85422652-85422671 | Msa1001580:intron | 35.0% | |
| ! | ATAGGATTCCACCGATTATT+GGG | - | chr6_4:85422670-85422689 | Msa1001580:intron | 35.0% |
| TCATGAACCAACCCAATAAT+CGG | + | chr6_4:85422684-85422703 | None:intergenic | 35.0% | |
| !! | ATTATTGGGTTGGTTCATGA+GGG | - | chr6_4:85422684-85422703 | Msa1001580:intron | 35.0% |
| ATGGTCCTCAATTTGAAAGA+GGG | - | chr6_4:85422805-85422824 | Msa1001580:intron | 35.0% | |
| TTCTTCCCTCTTTCAAATTG+AGG | + | chr6_4:85422813-85422832 | None:intergenic | 35.0% | |
| ATCTCAACATTCTCAAACGA+AGG | + | chr6_4:85422840-85422859 | None:intergenic | 35.0% | |
| ATAAATGGTGCGCCTAATAA+TGG | - | chr6_4:85422888-85422907 | Msa1001580:CDS | 35.0% | |
| AGATGTTGCAGGAAAGAAAA+AGG | - | chr6_4:85423052-85423071 | Msa1001580:intron | 35.0% | |
| TGTTCCTTCTATATCACACT+AGG | + | chr6_4:85423443-85423462 | None:intergenic | 35.0% | |
| TGTAGACCCCTCTTTAAATT+TGG | - | chr6_4:85423494-85423513 | Msa1001580:intron | 35.0% | |
| AAGAACCTGAGTTAAAGAGA+AGG | - | chr6_4:85423702-85423721 | Msa1001580:intron | 35.0% | |
| AAATGGAAAAGTGACATGGA+AGG | + | chr6_4:85424121-85424140 | None:intergenic | 35.0% | |
| TCGGTTAGGAACAAAGAAAA+AGG | + | chr6_4:85424146-85424165 | None:intergenic | 35.0% | |
| ! | TTGATGGCTTGAACAATATG+AGG | + | chr6_4:85424199-85424218 | None:intergenic | 35.0% |
| GAGATAAGCTTGAGATTTGA+TGG | + | chr6_4:85424215-85424234 | None:intergenic | 35.0% | |
| !! | TTATTTCGAAAGGCATTGCT+AGG | - | chr6_4:85424402-85424421 | Msa1001580:intron | 35.0% |
| !! | TTTTTGGTAGGCTTCATTGA+TGG | - | chr6_4:85424505-85424524 | Msa1001580:intron | 35.0% |
| TCAGATTATTTGCGGCTATT+TGG | - | chr6_4:85424557-85424576 | Msa1001580:intron | 35.0% | |
| ATACTCTGTTGAAATTCCAG+TGG | - | chr6_4:85424701-85424720 | Msa1001580:intron | 35.0% | |
| TCACTTAAAACGATATCCAC+TGG | + | chr6_4:85424720-85424739 | None:intergenic | 35.0% | |
| ! | GTTTGTCTAGTGTCGTTAAT+AGG | - | chr6_4:85424769-85424788 | Msa1001580:intron | 35.0% |
| TATGAAGCTGATGTATTGGA+AGG | + | chr6_4:85425090-85425109 | None:intergenic | 35.0% | |
| !!! | TTCTTTTAGTTCTAGCCTCT+AGG | - | chr6_4:85425269-85425288 | Msa1001580:intron | 35.0% |
| ! | TCTGTTGATGGATAAGGAAT+AGG | - | chr6_4:85425332-85425351 | Msa1001580:intron | 35.0% |
| CAAATTATGATGACCACATG+AGG | - | chr6_4:85425503-85425522 | Msa1001580:intron | 35.0% | |
| AGCTTACCTTTGATAGATTC+AGG | - | chr6_4:85425535-85425554 | Msa1001580:intron | 35.0% | |
| GAACTGATGGGAATGTTTAT+TGG | - | chr6_4:85425868-85425887 | Msa1001580:intron | 35.0% | |
| AGGGCAGATAAAAGTCAAAA+GGG | + | chr6_4:85425961-85425980 | None:intergenic | 35.0% | |
| AAGGGCAGATAAAAGTCAAA+AGG | + | chr6_4:85425962-85425981 | None:intergenic | 35.0% | |
| AGGTGAATAATACATACACG+TGG | - | chr6_4:85426013-85426032 | Msa1001580:intron | 35.0% | |
| ! | CACAAGTTCATTGGTACTTT+TGG | + | chr6_4:85426073-85426092 | None:intergenic | 35.0% |
| ATCACATTGCACAAGTTCAT+TGG | + | chr6_4:85426082-85426101 | None:intergenic | 35.0% | |
| ! | GCAATTGTCATTGGTCATTT+TGG | + | chr6_4:85426117-85426136 | None:intergenic | 35.0% |
| AGCATATGTTAGCAATGACT+TGG | - | chr6_4:85426301-85426320 | Msa1001580:intron | 35.0% | |
| TTGGTTACAGCAACAAACAT+CGG | - | chr6_4:85426320-85426339 | Msa1001580:intron | 35.0% | |
| AGAATAAGTGTATATGCGTG+GGG | - | chr6_4:85426819-85426838 | Msa1001580:intron | 35.0% | |
| ! | CACTTAAAAAGCATGATCCA+TGG | + | chr6_4:85426895-85426914 | None:intergenic | 35.0% |
| GTGATGAGAAACTTAATCGA+TGG | + | chr6_4:85427250-85427269 | None:intergenic | 35.0% | |
| CAATGCGCATAATATATGCA+AGG | + | chr6_4:85427523-85427542 | None:intergenic | 35.0% | |
| TCAATTGAGTTAAGCTTACG+AGG | - | chr6_4:85427548-85427567 | Msa1001580:intron | 35.0% | |
| !!! | GTTTGGTTTTTTGAGTGGAT+AGG | + | chr6_4:85427858-85427877 | None:intergenic | 35.0% |
| AGTTGAGAAACAAGGAAAGT+GGG | + | chr6_4:85427880-85427899 | None:intergenic | 35.0% | |
| !! | TTGAGTTGAGTTGAGAAACA+AGG | + | chr6_4:85427888-85427907 | None:intergenic | 35.0% |
| AAAACACTTGCTTCCTTTCA+AGG | - | chr6_4:85428144-85428163 | Msa1001580:intron | 35.0% | |
| ATGACCCAAGATTCAAATGT+GGG | + | chr6_4:85428286-85428305 | None:intergenic | 35.0% | |
| AATGACCCAAGATTCAAATG+TGG | + | chr6_4:85428287-85428306 | None:intergenic | 35.0% | |
| ! | TCTGACTAAAAGTGAGTTGA+AGG | - | chr6_4:85428420-85428439 | Msa1001580:intron | 35.0% |
| TTGAGAGAAACAAACATGTC+AGG | - | chr6_4:85428577-85428596 | Msa1001580:intron | 35.0% | |
| AATAGCATCACATCAAAAGG+GGG | + | chr6_4:85428701-85428720 | None:intergenic | 35.0% | |
| ! | TGTGTAAGTGTAAAGCATCA+TGG | - | chr6_4:85428863-85428882 | Msa1001580:intron | 35.0% |
| TGGATGTTACAAGTTCCATT+TGG | - | chr6_4:85428883-85428902 | Msa1001580:intron | 35.0% | |
| GAGTGAATGTCAATCATGTT+TGG | + | chr6_4:85429106-85429125 | None:intergenic | 35.0% | |
| AGCATTCAGAAATTCTTGTG+TGG | + | chr6_4:85429128-85429147 | None:intergenic | 35.0% | |
| !! | CCCTTCACTCTTTTACTTTT+TGG | - | chr6_4:85429250-85429269 | Msa1001580:intron | 35.0% |
| !!! | TTTTTTTGTTTTGCTGCCCT+TGG | - | chr6_4:85429278-85429297 | Msa1001580:intron | 35.0% |
| CATGCAATGAAATACTACCA+AGG | + | chr6_4:85429298-85429317 | None:intergenic | 35.0% | |
| CATGTCCATAACTAAACAAG+TGG | - | chr6_4:85429314-85429333 | Msa1001580:intron | 35.0% | |
| TTATGGAAGTGGAGTACAAT+AGG | + | chr6_4:85429688-85429707 | None:intergenic | 35.0% | |
| TTGTACTCCACTTCCATAAA+AGG | - | chr6_4:85429689-85429708 | Msa1001580:intron | 35.0% | |
| ! | TTACAGTCCTTTTATGGAAG+TGG | + | chr6_4:85429699-85429718 | None:intergenic | 35.0% |
| AATTGTGTGATGTGATTCGA+AGG | + | chr6_4:85429806-85429825 | None:intergenic | 35.0% | |
| !!! | TGCTGGAAAGTTTTCTAGTT+AGG | - | chr6_4:85430083-85430102 | Msa1001580:intron | 35.0% |
| TTGCATGCTGCAGAAATTAT+CGG | - | chr6_4:85430139-85430158 | Msa1001580:five_prime_UTR | 35.0% | |
| ! | ACATTCAGACTTTTGCACAT+TGG | + | chr6_4:85430272-85430291 | None:intergenic | 35.0% |
| CTTACTTCCACTTCTATAGA+GGG | - | chr6_4:85430303-85430322 | Msa1001580:five_prime_UTR | 35.0% | |
| TTACTTCCACTTCTATAGAG+GGG | - | chr6_4:85430304-85430323 | Msa1001580:five_prime_UTR | 35.0% | |
| ! | ATTTTCATGTTCACTTGCCA+AGG | - | chr6_4:85430346-85430365 | Msa1001580:five_prime_UTR | 35.0% |
| !! | TATACGGTTGGTTTGATAGT+TGG | + | chr6_4:85430619-85430638 | None:intergenic | 35.0% |
| TCAAACCAACCGTATATTTC+TGG | - | chr6_4:85430623-85430642 | Msa1001580:five_prime_UTR | 35.0% | |
| AGACACTGACCAGAAATATA+CGG | + | chr6_4:85430635-85430654 | None:intergenic | 35.0% | |
| TACATATTTGAGTGTTTGGC+TGG | - | chr6_4:85431072-85431091 | Msa1001580:five_prime_UTR | 35.0% | |
| !! | TGCATTTCTAGTCCTTAACA+AGG | + | chr6_4:85431162-85431181 | None:intergenic | 35.0% |
| GTGAAACAAATGTATGATGG+TGG | - | chr6_4:85431200-85431219 | Msa1001580:five_prime_UTR | 35.0% | |
| ACTTATAAGCTGTAGATGCA+TGG | + | chr6_4:85431435-85431454 | None:intergenic | 35.0% | |
| CTTCACATCATAAGTCTTTC+TGG | + | chr6_4:85431495-85431514 | None:intergenic | 35.0% | |
| CAGAAAGACTTATGATGTGA+AGG | - | chr6_4:85431493-85431512 | Msa1001580:five_prime_UTR | 35.0% | |
| !! | AGAAGTGGTGTTGTTGATGT+TGG | + | chr6_4:85421574-85421593 | None:intergenic | 40.0% |
| ATGAGATTGAGAAGAAGGGT+TGG | + | chr6_4:85421643-85421662 | None:intergenic | 40.0% | |
| ATCCACCGTCTTATCACAAA+CGG | - | chr6_4:85421841-85421860 | Msa1001580:CDS | 40.0% | |
| CTGTACCGTTTGTGATAAGA+CGG | + | chr6_4:85421849-85421868 | None:intergenic | 40.0% | |
| AAGTGAGAGTTGGGAAAACT+GGG | + | chr6_4:85421891-85421910 | None:intergenic | 40.0% | |
| AAAGTGAGAGTTGGGAAAAC+TGG | + | chr6_4:85421892-85421911 | None:intergenic | 40.0% | |
| GTGACAATGGAGTAATGGTT+AGG | + | chr6_4:85421916-85421935 | None:intergenic | 40.0% | |
| AACCATTACTCCATTGTCAC+TGG | - | chr6_4:85421916-85421935 | Msa1001580:intron | 40.0% | |
| TGATGATACCATGGTAAGGA+GGG | + | chr6_4:85421948-85421967 | None:intergenic | 40.0% | |
| ! | TTGATGATACCATGGTAAGG+AGG | + | chr6_4:85421949-85421968 | None:intergenic | 40.0% |
| !!! | TTCTTTTTCGATCCGGTTAC+CGG | - | chr6_4:85421973-85421992 | Msa1001580:intron | 40.0% |
| ! | GTGAATTTTTCTCCGGTAAC+CGG | + | chr6_4:85421988-85422007 | None:intergenic | 40.0% |
| TACCGGAGAAAAATTCACCA+TGG | - | chr6_4:85421990-85422009 | Msa1001580:intron | 40.0% | |
| ! | AGCCATGGTGAATTTTTCTC+CGG | + | chr6_4:85421995-85422014 | None:intergenic | 40.0% |
| !! | TTTTGATTCATGGCTAGCCA+TGG | + | chr6_4:85422010-85422029 | None:intergenic | 40.0% |
| ! | TGGCTAGCCATGAATCAAAA+TGG | - | chr6_4:85422010-85422029 | Msa1001580:intron | 40.0% |
| CTAGCCATGAATCAAAATGG+TGG | - | chr6_4:85422013-85422032 | Msa1001580:intron | 40.0% | |
| !!! | CAAGCCACCATTTTGATTCA+TGG | + | chr6_4:85422020-85422039 | None:intergenic | 40.0% |
| CATGAATCAAAATGGTGGCT+TGG | - | chr6_4:85422018-85422037 | Msa1001580:intron | 40.0% | |
| GTTGACAACAGTTTGCCATA+AGG | + | chr6_4:85422049-85422068 | None:intergenic | 40.0% | |
| TTTGAGGATCCTGATCATCA+AGG | - | chr6_4:85422255-85422274 | Msa1001580:intron | 40.0% | |
| ! | ACTTGATGACCTTGATGATC+AGG | + | chr6_4:85422267-85422286 | None:intergenic | 40.0% |
| GATCATCAAGGTCATCAAGT+TGG | - | chr6_4:85422267-85422286 | Msa1001580:intron | 40.0% | |
| TGAGTAACCTCATCATCATC+AGG | + | chr6_4:85422294-85422313 | None:intergenic | 40.0% | |
| AAGCTGTTGCTAGGATTGAT+GGG | - | chr6_4:85422313-85422332 | Msa1001580:intron | 40.0% | |
| GCTAGGATTGATGGGATTAT+AGG | - | chr6_4:85422321-85422340 | Msa1001580:intron | 40.0% | |
| !! | TCATGGGTTGGAAAAAAGAG+GGG | - | chr6_4:85422353-85422372 | Msa1001580:intron | 40.0% |
| ! | GGAAAAAAGAGGGGTTTTTG+AGG | - | chr6_4:85422362-85422381 | Msa1001580:intron | 40.0% |
| !! | TATGGTTGGTGATCATGGTA+TGG | - | chr6_4:85422398-85422417 | Msa1001580:intron | 40.0% |
| ATACGCCTTTGCTTGCAATT+TGG | - | chr6_4:85422502-85422521 | Msa1001580:intron | 40.0% | |
| TTGTGGCGAAGATGAATGAA+GGG | - | chr6_4:85422559-85422578 | Msa1001580:intron | 40.0% | |
| GATGAATGAAGGGTTGAGTT+TGG | - | chr6_4:85422569-85422588 | Msa1001580:intron | 40.0% | |
| TGAATGAAGGGTTGAGTTTG+GGG | - | chr6_4:85422571-85422590 | Msa1001580:intron | 40.0% | |
| TGAAGGAAGATTTGCCGAAA+CGG | - | chr6_4:85422628-85422647 | Msa1001580:intron | 40.0% | |
| ! | GATAGGATTCCACCGATTAT+TGG | - | chr6_4:85422669-85422688 | Msa1001580:intron | 40.0% |
| !! | GATTATTGGGTTGGTTCATG+AGG | - | chr6_4:85422683-85422702 | Msa1001580:intron | 40.0% |
| ! | GTTGGTTCATGAGGGTTATA+AGG | - | chr6_4:85422692-85422711 | Msa1001580:intron | 40.0% |
| CATGGTCCTCAATTTGAAAG+AGG | - | chr6_4:85422804-85422823 | Msa1001580:intron | 40.0% | |
| TTCGGTAGAAGAACAGATTG+CGG | + | chr6_4:85422927-85422946 | None:intergenic | 40.0% | |
| GAAGCATGAAAAGATGTTGC+AGG | - | chr6_4:85423041-85423060 | Msa1001580:intron | 40.0% | |
| !! | TTCTTCTAGTTCTAGCCTCT+AGG | - | chr6_4:85423090-85423109 | Msa1001580:intron | 40.0% |
| GATTTCTGTCAAGGCTAACT+GGG | - | chr6_4:85423384-85423403 | Msa1001580:intron | 40.0% | |
| AGAAGGAACATTTCTTTCGG+AGG | - | chr6_4:85423453-85423472 | Msa1001580:intron | 40.0% | |
| TTTAAAGAGGGGTCTACAGA+TGG | + | chr6_4:85423492-85423511 | None:intergenic | 40.0% | |
| CATTCAGTGAAATGCCACAA+GGG | + | chr6_4:85423538-85423557 | None:intergenic | 40.0% | |
| TCATTCAGTGAAATGCCACA+AGG | + | chr6_4:85423539-85423558 | None:intergenic | 40.0% | |
| !! | TTACAGGGTGTTACTGTTTG+TGG | - | chr6_4:85423671-85423690 | Msa1001580:intron | 40.0% |
| ! | GTGTTACTGTTTGTGGTAAC+TGG | - | chr6_4:85423678-85423697 | Msa1001580:intron | 40.0% |
| AACCTGAGTTAAAGAGAAGG+AGG | - | chr6_4:85423705-85423724 | Msa1001580:intron | 40.0% | |
| TTCCTCCTTCTCTTTAACTC+AGG | + | chr6_4:85423710-85423729 | None:intergenic | 40.0% | |
| GGAGAAATGGAAAAGTGACA+TGG | + | chr6_4:85424125-85424144 | None:intergenic | 40.0% | |
| TATGAGGTAGAAGAATGGCA+TGG | + | chr6_4:85424183-85424202 | None:intergenic | 40.0% | |
| !!! | TAGAGTTTTGAGTTGGGTGT+CGG | - | chr6_4:85424299-85424318 | Msa1001580:intron | 40.0% |
| ! | TGTCGGCTATAAGAAAGGAT+AGG | - | chr6_4:85424316-85424335 | Msa1001580:intron | 40.0% |
| ATGCCTTTCGAAATAACCAC+CGG | + | chr6_4:85424398-85424417 | None:intergenic | 40.0% | |
| CTGATGTATTGGAAGGCAAA+AGG | + | chr6_4:85425083-85425102 | None:intergenic | 40.0% | |
| GAGCTGTTGCAGAAAGAAAA+AGG | - | chr6_4:85425231-85425250 | Msa1001580:intron | 40.0% | |
| GGCTAGAACTAAAAGAATCC+AGG | + | chr6_4:85425266-85425285 | None:intergenic | 40.0% | |
| TGAAGGCAGTTTAATCCTAG+AGG | + | chr6_4:85425287-85425306 | None:intergenic | 40.0% | |
| !!! | CTTTGGTTTTTCACATCTGC+TGG | - | chr6_4:85425406-85425425 | Msa1001580:intron | 40.0% |
| ATGAGGCCTGAATCTATCAA+AGG | + | chr6_4:85425544-85425563 | None:intergenic | 40.0% | |
| AATGGTAACACCCTGCAAAT+AGG | + | chr6_4:85425667-85425686 | None:intergenic | 40.0% | |
| ! | GGTTTGCTTAAGAGCTAACT+TGG | - | chr6_4:85425776-85425795 | Msa1001580:intron | 40.0% |
| CAGTAGTCATTATGAGGCAT+TGG | + | chr6_4:85425907-85425926 | None:intergenic | 40.0% | |
| GATATTATACGAGAGTAGCG+TGG | + | chr6_4:85426238-85426257 | None:intergenic | 40.0% | |
| !! | GTGAGTGATTAGTCTCACAT+TGG | - | chr6_4:85426376-85426395 | Msa1001580:intron | 40.0% |
| ! | GTTGGATAAGTTGGCAGTAT+CGG | + | chr6_4:85426439-85426458 | None:intergenic | 40.0% |
| !! | TGGATGAGTGTTGGATAAGT+TGG | + | chr6_4:85426448-85426467 | None:intergenic | 40.0% |
| AAATTCACGTGGATGAGTGT+TGG | + | chr6_4:85426457-85426476 | None:intergenic | 40.0% | |
| TCACGCTTGAATCCTCATAA+AGG | - | chr6_4:85426917-85426936 | Msa1001580:intron | 40.0% | |
| CACGCTTGAATCCTCATAAA+GGG | - | chr6_4:85426918-85426937 | Msa1001580:intron | 40.0% | |
| TCTCACTCAATCCCTTTATG+AGG | + | chr6_4:85426932-85426951 | None:intergenic | 40.0% | |
| AACTCACTATGATCAAGACG+CGG | + | chr6_4:85427656-85427675 | None:intergenic | 40.0% | |
| !!! | AGTGGGTTTGGTTTTTTGAG+TGG | + | chr6_4:85427863-85427882 | None:intergenic | 40.0% |
| ! | AGAAACAAGGAAAGTGGGTT+TGG | + | chr6_4:85427875-85427894 | None:intergenic | 40.0% |
| GAGTTGAGAAACAAGGAAAG+TGG | + | chr6_4:85427881-85427900 | None:intergenic | 40.0% | |
| AGGAGATGAAAGTGGAAGAA+GGG | + | chr6_4:85428050-85428069 | None:intergenic | 40.0% | |
| AAGGAGATGAAAGTGGAAGA+AGG | + | chr6_4:85428051-85428070 | None:intergenic | 40.0% | |
| GTATTGAAGAAAGAGGTGGA+AGG | + | chr6_4:85428070-85428089 | None:intergenic | 40.0% | |
| !! | GAGAGTATTGAAGAAAGAGG+TGG | + | chr6_4:85428074-85428093 | None:intergenic | 40.0% |
| ! | GGAAGCAAGTGTTTTCTTCT+GGG | + | chr6_4:85428139-85428158 | None:intergenic | 40.0% |
| ! | AGGAAGCAAGTGTTTTCTTC+TGG | + | chr6_4:85428140-85428159 | None:intergenic | 40.0% |
| ! | ATGTCTGGTAAGTTTTGCGT+TGG | - | chr6_4:85428371-85428390 | Msa1001580:intron | 40.0% |
| GCTTTGATTCTCTTCACTTC+AGG | - | chr6_4:85429027-85429046 | Msa1001580:intron | 40.0% | |
| ! | GCATTCTTTTCCCACCATTT+CGG | + | chr6_4:85429082-85429101 | None:intergenic | 40.0% |
| !! | TCTTGAAGCAAGAGTACCTT+GGG | + | chr6_4:85429226-85429245 | None:intergenic | 40.0% |
| !! | TTCTTGAAGCAAGAGTACCT+TGG | + | chr6_4:85429227-85429246 | None:intergenic | 40.0% |
| ACAATAGGAAACTCAGCATG+CGG | + | chr6_4:85429673-85429692 | None:intergenic | 40.0% | |
| ! | TCGAAGGTTTTACTCTGTCA+GGG | + | chr6_4:85429790-85429809 | None:intergenic | 40.0% |
| ! | TTCGAAGGTTTTACTCTGTC+AGG | + | chr6_4:85429791-85429810 | None:intergenic | 40.0% |
| GACTTCTAAACTGATAGCCA+TGG | + | chr6_4:85429844-85429863 | None:intergenic | 40.0% | |
| AGCAACATGAATCAGACAGT+CGG | + | chr6_4:85429930-85429949 | None:intergenic | 40.0% | |
| GTTGCTCTAGTATTCTGCTT+TGG | - | chr6_4:85429944-85429963 | Msa1001580:intron | 40.0% | |
| TTACTGCATGTGCAGCAATA+GGG | - | chr6_4:85429970-85429989 | Msa1001580:intron | 40.0% | |
| GCAGCATGCAAATTAAAGCA+TGG | + | chr6_4:85430130-85430149 | None:intergenic | 40.0% | |
| CCTCTATAGAAGTGGAAGTA+AGG | + | chr6_4:85430305-85430324 | None:intergenic | 40.0% | |
| CCTTACTTCCACTTCTATAG+AGG | - | chr6_4:85430302-85430321 | Msa1001580:five_prime_UTR | 40.0% | |
| CTGTTCAAGCTAAGCATTTC+TGG | - | chr6_4:85430388-85430407 | Msa1001580:five_prime_UTR | 40.0% | |
| ! | TTGGTTTGATAGTTGGAGTG+GGG | + | chr6_4:85430612-85430631 | None:intergenic | 40.0% |
| !! | GTTGGTTTGATAGTTGGAGT+GGG | + | chr6_4:85430613-85430632 | None:intergenic | 40.0% |
| ACTGACCAGAAATATACGGT+TGG | + | chr6_4:85430631-85430650 | None:intergenic | 40.0% | |
| !! | TCAGTGTCTATTCTGAAACC+AGG | - | chr6_4:85430646-85430665 | Msa1001580:five_prime_UTR | 40.0% |
| !! | GTACAGAAAACAGAAGCATC+AGG | + | chr6_4:85430965-85430984 | None:intergenic | 40.0% |
| ! | GATGCTTCTGTTTTCTGTAC+TGG | - | chr6_4:85430965-85430984 | Msa1001580:five_prime_UTR | 40.0% |
| !! | GATGGTGGATGTATATGCTT+AGG | - | chr6_4:85431215-85431234 | Msa1001580:five_prime_UTR | 40.0% |
| GATTATCAAACAGAGTCTGC+TGG | + | chr6_4:85431399-85431418 | None:intergenic | 40.0% | |
| ATAAGCTGTAGATGCATGGA+TGG | + | chr6_4:85431431-85431450 | None:intergenic | 40.0% | |
| GAAGAGGAGAGAGAAAGTGA+TGG | + | chr6_4:85421689-85421708 | None:intergenic | 45.0% | |
| AAGAGATGAGGATGACAGTG+GGG | + | chr6_4:85421774-85421793 | None:intergenic | 45.0% | |
| GAAGAGATGAGGATGACAGT+GGG | + | chr6_4:85421775-85421794 | None:intergenic | 45.0% | |
| AGAAGAGATGAGGATGACAG+TGG | + | chr6_4:85421776-85421795 | None:intergenic | 45.0% | |
| GTCATCCTCATCTCTTCTGA+CGG | - | chr6_4:85421778-85421797 | Msa1001580:exon | 45.0% | |
| ! | TCTTCTGACGGTTTCCGTTT+TGG | - | chr6_4:85421790-85421809 | Msa1001580:CDS | 45.0% |
| !! | TGGGAGTTGAGGTTTTGTGT+TGG | + | chr6_4:85421819-85421838 | None:intergenic | 45.0% |
| GTGATAAGACGGTGGATGTT+GGG | + | chr6_4:85421838-85421857 | None:intergenic | 45.0% | |
| TGTGATAAGACGGTGGATGT+TGG | + | chr6_4:85421839-85421858 | None:intergenic | 45.0% | |
| TACCGTTTGTGATAAGACGG+TGG | + | chr6_4:85421846-85421865 | None:intergenic | 45.0% | |
| GGTTAGGGAAAGTGAGAGTT+GGG | + | chr6_4:85421900-85421919 | None:intergenic | 45.0% | |
| TGGTTAGGGAAAGTGAGAGT+TGG | + | chr6_4:85421901-85421920 | None:intergenic | 45.0% | |
| GACCAGTGACAATGGAGTAA+TGG | + | chr6_4:85421921-85421940 | None:intergenic | 45.0% | |
| TGGCAAACTGTTGTCAACAG+TGG | - | chr6_4:85422051-85422070 | Msa1001580:intron | 45.0% | |
| !!! | CCTTTTTTTACCTCAGAGCC+AGG | + | chr6_4:85422102-85422121 | None:intergenic | 45.0% |
| !! | CCTGGCTCTGAGGTAAAAAA+AGG | - | chr6_4:85422099-85422118 | Msa1001580:intron | 45.0% |
| ! | AGTTGGTCCTGATGATGATG+AGG | - | chr6_4:85422284-85422303 | Msa1001580:intron | 45.0% |
| AGGTTACTCAAGCTGTTGCT+AGG | - | chr6_4:85422304-85422323 | Msa1001580:intron | 45.0% | |
| CAAGCTGTTGCTAGGATTGA+TGG | - | chr6_4:85422312-85422331 | Msa1001580:intron | 45.0% | |
| GGATTGATGGGATTATAGGG+AGG | - | chr6_4:85422325-85422344 | Msa1001580:intron | 45.0% | |
| !! | GTTGGTGATCATGGTATGGT+TGG | - | chr6_4:85422402-85422421 | Msa1001580:intron | 45.0% |
| ! | TTATTCGTCGGCTGATGTTG+TGG | - | chr6_4:85422542-85422561 | Msa1001580:intron | 45.0% |
| GTTGTGGCGAAGATGAATGA+AGG | - | chr6_4:85422558-85422577 | Msa1001580:intron | 45.0% | |
| AGTTTGGGGAAGGTTGAGAA+TGG | - | chr6_4:85422585-85422604 | Msa1001580:intron | 45.0% | |
| GTTTGGGGAAGGTTGAGAAT+GGG | - | chr6_4:85422586-85422605 | Msa1001580:intron | 45.0% | |
| TCCGCATAATGAAGCCGTTT+CGG | + | chr6_4:85422645-85422664 | None:intergenic | 45.0% | |
| ! | GATTCCACCGATTATTGGGT+TGG | - | chr6_4:85422674-85422693 | Msa1001580:intron | 45.0% |
| TGAACCAACCCAATAATCGG+TGG | + | chr6_4:85422681-85422700 | None:intergenic | 45.0% | |
| GGTTCATGAGGGTTATAAGG+TGG | - | chr6_4:85422695-85422714 | Msa1001580:intron | 45.0% | |
| GTTATAAGGTGGAGCAGAGT+AGG | - | chr6_4:85422706-85422725 | Msa1001580:intron | 45.0% | |
| GCAATCTGTTCTTCTACCGA+AGG | - | chr6_4:85422926-85422945 | Msa1001580:CDS | 45.0% | |
| CAAGAGTGATGTGATGCTCA+GGG | - | chr6_4:85423014-85423033 | Msa1001580:intron | 45.0% | |
| GGCTAGAACTAGAAGAATCC+AGG | + | chr6_4:85423087-85423106 | None:intergenic | 45.0% | |
| CGATTTCTGTCAAGGCTAAC+TGG | - | chr6_4:85423383-85423402 | Msa1001580:intron | 45.0% | |
| ! | TCACTGAGTTGTTTCCCTTG+TGG | - | chr6_4:85423521-85423540 | Msa1001580:intron | 45.0% |
| !! | TTGGGTGTCGGCTATAAGAA+AGG | - | chr6_4:85424311-85424330 | Msa1001580:intron | 45.0% |
| AGGATAGGAATACCCACTCA+TGG | - | chr6_4:85424331-85424350 | Msa1001580:intron | 45.0% | |
| TAGGAATACCCACTCATGGA+AGG | - | chr6_4:85424335-85424354 | Msa1001580:intron | 45.0% | |
| AAAGCACACCTTCCATGAGT+GGG | + | chr6_4:85424346-85424365 | None:intergenic | 45.0% | |
| ! | AAAAGCACACCTTCCATGAG+TGG | + | chr6_4:85424347-85424366 | None:intergenic | 45.0% |
| !! | TTGAGATTTGGTGACTGCTC+CGG | - | chr6_4:85424376-85424395 | Msa1001580:intron | 45.0% |
| !! | TCGAAAGGCATTGCTAGGAA+CGG | - | chr6_4:85424407-85424426 | Msa1001580:intron | 45.0% |
| GGAACTCTGGATGAGAATAC+AGG | - | chr6_4:85424632-85424651 | Msa1001580:intron | 45.0% | |
| GTTAATAGGCTTGCCAGACT+AGG | - | chr6_4:85424783-85424802 | Msa1001580:intron | 45.0% | |
| CGAACTAGAACATCCTAGTC+TGG | + | chr6_4:85424799-85424818 | None:intergenic | 45.0% | |
| CCGAAATTCACAATCGTGAC+CGG | + | chr6_4:85424826-85424845 | None:intergenic | 45.0% | |
| CCGGTCACGATTGTGAATTT+CGG | - | chr6_4:85424823-85424842 | Msa1001580:intron | 45.0% | |
| CGGTCACGATTGTGAATTTC+GGG | - | chr6_4:85424824-85424843 | Msa1001580:intron | 45.0% | |
| AGCTCAACATGAACCTCATG+TGG | + | chr6_4:85425519-85425538 | None:intergenic | 45.0% | |
| AGCTCACAAGTTTGCACAGT+TGG | + | chr6_4:85426044-85426063 | None:intergenic | 45.0% | |
| GTGCAAACTTGTGAGCTGAA+AGG | - | chr6_4:85426047-85426066 | Msa1001580:intron | 45.0% | |
| AAACACGCCTCAAATCGTCA+AGG | - | chr6_4:85426978-85426997 | Msa1001580:intron | 45.0% | |
| CTCAAATCGTCAAGGCGTAA+GGG | - | chr6_4:85426986-85427005 | Msa1001580:intron | 45.0% | |
| GTAAATACACGGACGATTCG+AGG | - | chr6_4:85427053-85427072 | Msa1001580:intron | 45.0% | |
| ATGATCAAGACGCGGTTCAA+CGG | + | chr6_4:85427648-85427667 | None:intergenic | 45.0% | |
| !!! | GGTTTTTTGAGTGGATAGGC+TGG | + | chr6_4:85427854-85427873 | None:intergenic | 45.0% |
| !! | CGGGAGAGTATTGAAGAAAG+AGG | + | chr6_4:85428077-85428096 | None:intergenic | 45.0% |
| GGAAGAGAGAAAACCCTCTT+GGG | + | chr6_4:85428109-85428128 | None:intergenic | 45.0% | |
| AGGAAGAGAGAAAACCCTCT+TGG | + | chr6_4:85428110-85428129 | None:intergenic | 45.0% | |
| ! | TGTTTTCTTCTGGGTGGAGA+AGG | + | chr6_4:85428130-85428149 | None:intergenic | 45.0% |
| ! | AGCAAGTGTTTTCTTCTGGG+TGG | + | chr6_4:85428136-85428155 | None:intergenic | 45.0% |
| TCAGGTATGTGCAACTGTTC+CGG | - | chr6_4:85429045-85429064 | Msa1001580:intron | 45.0% | |
| ! | GAATGCTTTGAGTCAAGCTG+AGG | - | chr6_4:85429141-85429160 | Msa1001580:intron | 45.0% |
| GTACCTTGGGGAATAATGCT+CGG | + | chr6_4:85429213-85429232 | None:intergenic | 45.0% | |
| !! | CTTGAAGCAAGAGTACCTTG+GGG | + | chr6_4:85429225-85429244 | None:intergenic | 45.0% |
| CAATTGAGTGCTAAGCATCC+AGG | + | chr6_4:85429491-85429510 | None:intergenic | 45.0% | |
| GAATCAGACAGTCGGGAATT+GGG | + | chr6_4:85429922-85429941 | None:intergenic | 45.0% | |
| TGAATCAGACAGTCGGGAAT+TGG | + | chr6_4:85429923-85429942 | None:intergenic | 45.0% | |
| GCAACATGAATCAGACAGTC+GGG | + | chr6_4:85429929-85429948 | None:intergenic | 45.0% | |
| CTTACTGCATGTGCAGCAAT+AGG | - | chr6_4:85429969-85429988 | Msa1001580:intron | 45.0% | |
| TACTGCATGTGCAGCAATAG+GGG | - | chr6_4:85429971-85429990 | Msa1001580:intron | 45.0% | |
| AGTTAATGAGTGGGGTGATG+AGG | + | chr6_4:85430588-85430607 | None:intergenic | 45.0% | |
| ! | TGGTTTGATAGTTGGAGTGG+GGG | + | chr6_4:85430611-85430630 | None:intergenic | 45.0% |
| !! | GGTTGGTTTGATAGTTGGAG+TGG | + | chr6_4:85430614-85430633 | None:intergenic | 45.0% |
| TGTGACGGTTTATTGCACGA+CGG | + | chr6_4:85430731-85430750 | None:intergenic | 45.0% | |
| ! | GGCTGGTTGTATTCAGAAAG+TGG | - | chr6_4:85431089-85431108 | Msa1001580:five_prime_UTR | 45.0% |
| !! | AAATCACCGATTCCCTTAGG+CGG | + | chr6_4:85431342-85431361 | None:intergenic | 45.0% |
| !! | ACCAAATCACCGATTCCCTT+AGG | + | chr6_4:85431345-85431364 | None:intergenic | 45.0% |
| TGAAACTTCATCTGCTCCCA+AGG | - | chr6_4:85431368-85431387 | Msa1001580:five_prime_UTR | 45.0% | |
| TTCCAATGCGGTTAGACTCT+GGG | + | chr6_4:85431464-85431483 | None:intergenic | 45.0% | |
| TCTAACCGCATTGGAAGCTA+TGG | - | chr6_4:85431468-85431487 | Msa1001580:five_prime_UTR | 45.0% | |
| !! | AATAATAACAATAATAAAAA+GGG | + | chr6_4:85428189-85428208 | None:intergenic | 5.0% |
| !! | TAATAATAACAATAATAAAA+AGG | + | chr6_4:85428190-85428209 | None:intergenic | 5.0% |
| !! | TTATAACATAATTAAAAAAA+GGG | + | chr6_4:85428262-85428281 | None:intergenic | 5.0% |
| !! | ATTATAACATAATTAAAAAA+AGG | + | chr6_4:85428263-85428282 | None:intergenic | 5.0% |
| GTGGTGAGAGAGAGAAGAAG+AGG | + | chr6_4:85421705-85421724 | None:intergenic | 50.0% | |
| !!! | GTGGAGTTTTTTGAGGTGGC+GGG | + | chr6_4:85421749-85421768 | None:intergenic | 50.0% |
| !!! | GGTGGAGTTTTTTGAGGTGG+CGG | + | chr6_4:85421750-85421769 | None:intergenic | 50.0% |
| !!! | GGTGGTGGAGTTTTTTGAGG+TGG | + | chr6_4:85421753-85421772 | None:intergenic | 50.0% |
| !!! | TGGGGTGGTGGAGTTTTTTG+AGG | + | chr6_4:85421756-85421775 | None:intergenic | 50.0% |
| GGAAACCGTCAGAAGAGATG+AGG | + | chr6_4:85421786-85421805 | None:intergenic | 50.0% | |
| AACGGTACAGAAGCTCTCAC+TGG | - | chr6_4:85421859-85421878 | Msa1001580:CDS | 50.0% | |
| AGGGTAGAGACCAGTGACAA+TGG | + | chr6_4:85421929-85421948 | None:intergenic | 50.0% | |
| ! | AGGGAGGTTGATTCATGGGT+TGG | - | chr6_4:85422341-85422360 | Msa1001580:intron | 50.0% |
| TGAAGGGTTGAGTTTGGGGA+AGG | - | chr6_4:85422575-85422594 | Msa1001580:intron | 50.0% | |
| GCCGAAACGGCTTCATTATG+CGG | - | chr6_4:85422641-85422660 | Msa1001580:intron | 50.0% | |
| TAAGGTGGAGCAGAGTAGGA+CGG | - | chr6_4:85422710-85422729 | Msa1001580:intron | 50.0% | |
| ! | AAAGAGTGTGGTGGTGCTCA+TGG | - | chr6_4:85422738-85422757 | Msa1001580:intron | 50.0% |
| CCTGAGCATCACATCACTCT+TGG | + | chr6_4:85423016-85423035 | None:intergenic | 50.0% | |
| CCAAGAGTGATGTGATGCTC+AGG | - | chr6_4:85423013-85423032 | Msa1001580:intron | 50.0% | |
| GGCTAACTGGGCATTCTAGT+TGG | - | chr6_4:85423396-85423415 | Msa1001580:intron | 50.0% | |
| GTAGAAGAATGGCATGGAGG+AGG | + | chr6_4:85424177-85424196 | None:intergenic | 50.0% | |
| GAGGTAGAAGAATGGCATGG+AGG | + | chr6_4:85424180-85424199 | None:intergenic | 50.0% | |
| GGAGCAGTCACCAAATCTCA+AGG | + | chr6_4:85424377-85424396 | None:intergenic | 50.0% | |
| ! | GCTCCGGTGGTTATTTCGAA+AGG | - | chr6_4:85424392-85424411 | Msa1001580:intron | 50.0% |
| CAGCTCTCTACTTAGCTGCT+TGG | + | chr6_4:85424455-85424474 | None:intergenic | 50.0% | |
| ! | TTCAGCCGCGTCACTCTTTT+TGG | - | chr6_4:85424489-85424508 | Msa1001580:intron | 50.0% |
| GCCTACCAAAAAGAGTGACG+CGG | + | chr6_4:85424497-85424516 | None:intergenic | 50.0% | |
| CTGTGGTCTCGAAATTCACG+TGG | + | chr6_4:85426468-85426487 | None:intergenic | 50.0% | |
| ATGCGTGGGGAAGATTGTCA+AGG | - | chr6_4:85426832-85426851 | Msa1001580:intron | 50.0% | |
| GGGAAGATTGTCAAGGTGAG+TGG | - | chr6_4:85426839-85426858 | Msa1001580:intron | 50.0% | |
| CCTTACGCCTTGACGATTTG+AGG | + | chr6_4:85426988-85427007 | None:intergenic | 50.0% | |
| CCTCAAATCGTCAAGGCGTA+AGG | - | chr6_4:85426985-85427004 | Msa1001580:intron | 50.0% | |
| GAGGTGGAAGGAGATGAAAG+TGG | + | chr6_4:85428058-85428077 | None:intergenic | 50.0% | |
| AAAACCCTCTTGGGTGAGAG+TGG | + | chr6_4:85428100-85428119 | None:intergenic | 50.0% | |
| TGTGCAACTGTTCCGGAAAC+TGG | - | chr6_4:85429052-85429071 | Msa1001580:intron | 50.0% | |
| ! | TCTTTTCCCACCATTTCGGC+TGG | + | chr6_4:85429078-85429097 | None:intergenic | 50.0% |
| TTGCCGAGCATTATTCCCCA+AGG | - | chr6_4:85429207-85429226 | Msa1001580:intron | 50.0% | |
| ACAGTCGGGAATTGGGAATC+GGG | + | chr6_4:85429915-85429934 | None:intergenic | 50.0% | |
| GACAGTCGGGAATTGGGAAT+CGG | + | chr6_4:85429916-85429935 | None:intergenic | 50.0% | |
| CACTTCTATAGAGGGGCTGA+GGG | - | chr6_4:85430311-85430330 | Msa1001580:five_prime_UTR | 50.0% | |
| ACTTCTATAGAGGGGCTGAG+GGG | - | chr6_4:85430312-85430331 | Msa1001580:five_prime_UTR | 50.0% | |
| AGTGGGGGAGTTAATGAGTG+GGG | + | chr6_4:85430596-85430615 | None:intergenic | 50.0% | |
| GAGTGGGGGAGTTAATGAGT+GGG | + | chr6_4:85430597-85430616 | None:intergenic | 50.0% | |
| ACGGTTTATTGCACGACGGT+GGG | + | chr6_4:85430727-85430746 | None:intergenic | 50.0% | |
| ATCGAGCTGTGTTATGCGTC+TGG | + | chr6_4:85431308-85431327 | None:intergenic | 50.0% | |
| AACACAGCTCGATGCAGCAT+TGG | - | chr6_4:85431315-85431334 | Msa1001580:five_prime_UTR | 50.0% | |
| ATTGGTCCGCCTAAGGGAAT+CGG | - | chr6_4:85431333-85431352 | Msa1001580:five_prime_UTR | 50.0% | |
| GCCTAAGGGAATCGGTGATT+TGG | - | chr6_4:85431341-85431360 | Msa1001580:five_prime_UTR | 50.0% | |
| !! | GAGTCTGCTGGCTTATCCTT+GGG | + | chr6_4:85431387-85431406 | None:intergenic | 50.0% |
| !! | AGAGTCTGCTGGCTTATCCT+TGG | + | chr6_4:85431388-85431407 | None:intergenic | 50.0% |
| AGCTGTAGATGCATGGATGG+AGG | + | chr6_4:85431428-85431447 | None:intergenic | 50.0% | |
| CTTCCAATGCGGTTAGACTC+TGG | + | chr6_4:85431465-85431484 | None:intergenic | 50.0% | |
| CTGGACCATAGCTTCCAATG+CGG | + | chr6_4:85431476-85431495 | None:intergenic | 50.0% | |
| GGCAGTGATGAGTGACATGC+AGG | + | chr6_4:85421668-85421687 | None:intergenic | 55.0% | |
| !!! | GAGTTTTTTGAGGTGGCGGG+CGG | + | chr6_4:85421746-85421765 | None:intergenic | 55.0% |
| AGATGAGGATGACAGTGGGG+TGG | + | chr6_4:85421771-85421790 | None:intergenic | 55.0% | |
| ACGGTGGATGTTGGGAGTTG+AGG | + | chr6_4:85421830-85421849 | None:intergenic | 55.0% | |
| GGTCTCTACCCTCCTTACCA+TGG | - | chr6_4:85421937-85421956 | Msa1001580:intron | 55.0% | |
| ! | GCTGCTACTTACTTCTGGCC+TGG | - | chr6_4:85422081-85422100 | Msa1001580:intron | 55.0% |
| !! | TTACTTCTGGCCTGGCTCTG+AGG | - | chr6_4:85422089-85422108 | Msa1001580:intron | 55.0% |
| GGCGGCCAAATTGCAAGCAA+AGG | + | chr6_4:85422510-85422529 | None:intergenic | 55.0% | |
| AAGGTGGAGCAGAGTAGGAC+GGG | - | chr6_4:85422711-85422730 | Msa1001580:intron | 55.0% | |
| AGGACGGGGAAGAAAGAGTG+TGG | - | chr6_4:85422726-85422745 | Msa1001580:intron | 55.0% | |
| ! | ACGGGGAAGAAAGAGTGTGG+TGG | - | chr6_4:85422729-85422748 | Msa1001580:intron | 55.0% |
| AGGAGGAGGATGGATCGGTT+AGG | + | chr6_4:85424160-85424179 | None:intergenic | 55.0% | |
| CATGGAGGAGGAGGATGGAT+CGG | + | chr6_4:85424165-85424184 | None:intergenic | 55.0% | |
| AATGGCATGGAGGAGGAGGA+TGG | + | chr6_4:85424170-85424189 | None:intergenic | 55.0% | |
| GAAGAATGGCATGGAGGAGG+AGG | + | chr6_4:85424174-85424193 | None:intergenic | 55.0% | |
| !! | AGATTTGGTGACTGCTCCGG+TGG | - | chr6_4:85424379-85424398 | Msa1001580:intron | 55.0% |
| !! | GCCGCGTCACTCTTTTTGGT+AGG | - | chr6_4:85424493-85424512 | Msa1001580:intron | 55.0% |
| !! | GGATGTTCTAGTTCGTGCGC+CGG | - | chr6_4:85424804-85424823 | Msa1001580:intron | 55.0% |
| ! | CATTTCGGCTGGCCAGTTTC+CGG | + | chr6_4:85429067-85429086 | None:intergenic | 55.0% |
| AAACTGGCCAGCCGAAATGG+TGG | - | chr6_4:85429068-85429087 | Msa1001580:intron | 55.0% | |
| AACTGGCCAGCCGAAATGGT+GGG | - | chr6_4:85429069-85429088 | Msa1001580:intron | 55.0% | |
| CCTCAGCCCCTCTATAGAAG+TGG | + | chr6_4:85430313-85430332 | None:intergenic | 55.0% | |
| CCACTTCTATAGAGGGGCTG+AGG | - | chr6_4:85430310-85430329 | Msa1001580:five_prime_UTR | 55.0% | |
| TGGGGTGATGAGGAGTGAGA+GGG | + | chr6_4:85430578-85430597 | None:intergenic | 55.0% | |
| GGAGTGGGGGAGTTAATGAG+TGG | + | chr6_4:85430598-85430617 | None:intergenic | 55.0% | |
| GACGGTTTATTGCACGACGG+TGG | + | chr6_4:85430728-85430747 | None:intergenic | 55.0% | |
| !! | ATGCAGCATTGGTCCGCCTA+AGG | - | chr6_4:85431326-85431345 | Msa1001580:five_prime_UTR | 55.0% |
| !! | TGCAGCATTGGTCCGCCTAA+GGG | - | chr6_4:85431327-85431346 | Msa1001580:five_prime_UTR | 55.0% |
| CTCCCAGAGTCTAACCGCAT+TGG | - | chr6_4:85431459-85431478 | Msa1001580:five_prime_UTR | 55.0% | |
| !!! | TTTTTGAGGTGGCGGGCGGT+GGG | + | chr6_4:85421742-85421761 | None:intergenic | 60.0% |
| !!! | TTTTTTGAGGTGGCGGGCGG+TGG | + | chr6_4:85421743-85421762 | None:intergenic | 60.0% |
| TGAGGATGACAGTGGGGTGG+TGG | + | chr6_4:85421768-85421787 | None:intergenic | 60.0% | |
| !! | GGTGGCTTGGTCAGCCCTTA+TGG | - | chr6_4:85422031-85422050 | Msa1001580:intron | 60.0% |
| AGGTGGAGCAGAGTAGGACG+GGG | - | chr6_4:85422712-85422731 | Msa1001580:intron | 60.0% | |
| ACCCTCTTGGGTGAGAGTGG+CGG | + | chr6_4:85428097-85428116 | None:intergenic | 60.0% | |
| CGGAAACTGGCCAGCCGAAA+TGG | - | chr6_4:85429065-85429084 | Msa1001580:intron | 60.0% | |
| GTGGGGTGATGAGGAGTGAG+AGG | + | chr6_4:85430579-85430598 | None:intergenic | 60.0% | |
| GTGGGTGTGGTGGTTGAGGG+TGG | + | chr6_4:85421724-85421743 | None:intergenic | 65.0% | |
| GCGGTGGGTGTGGTGGTTGA+GGG | + | chr6_4:85421727-85421746 | None:intergenic | 65.0% | |
| TCCCGCCACTCTCACCCAAG+AGG | - | chr6_4:85428092-85428111 | Msa1001580:intron | 65.0% | |
| CCCTCTTGGGTGAGAGTGGC+GGG | + | chr6_4:85428096-85428115 | None:intergenic | 65.0% | |
| CCCGCCACTCTCACCCAAGA+GGG | - | chr6_4:85428093-85428112 | Msa1001580:intron | 65.0% | |
| GGCGGTGGGTGTGGTGGTTG+AGG | + | chr6_4:85421728-85421747 | None:intergenic | 70.0% | |
| TAGAGGGGCTGAGGGGCAGC+TGG | - | chr6_4:85430319-85430338 | Msa1001580:five_prime_UTR | 70.0% | |
| !!! | GTGGCGGGCGGTGGGTGTGG+TGG | + | chr6_4:85421734-85421753 | None:intergenic | 80.0% |
| !!! | GAGGTGGCGGGCGGTGGGTG+TGG | + | chr6_4:85421737-85421756 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 85421463 | 85431740 | 85421463 | ID=Msa1001580;Name=Msa1001580 |
| chr6_4 | mRNA | 85421463 | 85431740 | 85421463 | ID=Msa1001580-mRNA-1;Parent=Msa1001580;Name=Msa1001580-mRNA-1;_AED=0.09;_eAED=0.09;_QI=1671|1|1|1|0.66|0.75|4|327|138 |
| chr6_4 | exon | 85421463 | 85421921 | 85421463 | ID=Msa1001580-mRNA-1:exon:16798;Parent=Msa1001580-mRNA-1 |
| chr6_4 | exon | 85422836 | 85423000 | 85422836 | ID=Msa1001580-mRNA-1:exon:16797;Parent=Msa1001580-mRNA-1 |
| chr6_4 | exon | 85423975 | 85424154 | 85423975 | ID=Msa1001580-mRNA-1:exon:16796;Parent=Msa1001580-mRNA-1 |
| chr6_4 | exon | 85430130 | 85431740 | 85430130 | ID=Msa1001580-mRNA-1:exon:16795;Parent=Msa1001580-mRNA-1 |
| chr6_4 | five_prime_UTR | 85430130 | 85431740 | 85430130 | ID=Msa1001580-mRNA-1:five_prime_utr;Parent=Msa1001580-mRNA-1 |
| chr6_4 | five_prime_UTR | 85424095 | 85424154 | 85424095 | ID=Msa1001580-mRNA-1:five_prime_utr;Parent=Msa1001580-mRNA-1 |
| chr6_4 | CDS | 85423975 | 85424094 | 85423975 | ID=Msa1001580-mRNA-1:cds;Parent=Msa1001580-mRNA-1 |
| chr6_4 | CDS | 85422836 | 85423000 | 85422836 | ID=Msa1001580-mRNA-1:cds;Parent=Msa1001580-mRNA-1 |
| chr6_4 | CDS | 85421790 | 85421921 | 85421790 | ID=Msa1001580-mRNA-1:cds;Parent=Msa1001580-mRNA-1 |
| chr6_4 | three_prime_UTR | 85421463 | 85421789 | 85421463 | ID=Msa1001580-mRNA-1:three_prime_utr;Parent=Msa1001580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
