Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526410 | XP_013447071.1 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526410 | sp|Q38861|XPB1_ARATH | 85.547 | 768 | 105 | 5 | 1 | 764 | 1 | 766 | 0.0 | 1308 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526410 | A0A072TW37 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0087000 | Msa0526410 | 0.816338 | 5.821100e-52 | -8.615850e-47 |
Msa0102120 | Msa0526410 | 0.801119 | 1.046371e-48 | -8.615850e-47 |
Msa0140390 | Msa0526410 | 0.807113 | 5.923483e-50 | -8.615850e-47 |
Msa0188630 | Msa0526410 | 0.814513 | 1.482519e-51 | -8.615850e-47 |
Msa0223380 | Msa0526410 | 0.817699 | 2.880366e-52 | -8.615850e-47 |
Msa0365490 | Msa0526410 | 0.846008 | 2.844699e-59 | -8.615850e-47 |
Msa0377530 | Msa0526410 | 0.820813 | 5.624209e-53 | -8.615850e-47 |
Msa0380040 | Msa0526410 | 0.806574 | 7.700493e-50 | -8.615850e-47 |
Msa0388030 | Msa0526410 | -0.800362 | 1.493345e-48 | -8.615850e-47 |
Msa0389810 | Msa0526410 | 0.831008 | 2.129475e-55 | -8.615850e-47 |
Msa0394340 | Msa0526410 | 0.805163 | 1.524031e-49 | -8.615850e-47 |
Msa0433530 | Msa0526410 | 0.814121 | 1.810645e-51 | -8.615850e-47 |
Msa0436190 | Msa0526410 | 0.820163 | 7.928840e-53 | -8.615850e-47 |
Msa0442850 | Msa0526410 | 0.805189 | 1.504999e-49 | -8.615850e-47 |
Msa0449760 | Msa0526410 | 0.812087 | 5.058641e-51 | -8.615850e-47 |
Msa0458440 | Msa0526410 | 0.805094 | 1.575525e-49 | -8.615850e-47 |
Msa0464900 | Msa0526410 | 0.805875 | 1.080779e-49 | -8.615850e-47 |
Msa0468130 | Msa0526410 | 0.841993 | 3.391092e-58 | -8.615850e-47 |
Msa0473240 | Msa0526410 | 0.852400 | 4.733953e-61 | -8.615850e-47 |
Msa0477260 | Msa0526410 | 0.818229 | 2.185972e-52 | -8.615850e-47 |
Msa0480320 | Msa0526410 | 0.830555 | 2.748837e-55 | -8.615850e-47 |
Msa0265380 | Msa0526410 | 0.803246 | 3.819576e-49 | -8.615850e-47 |
Msa0269520 | Msa0526410 | 0.805254 | 1.458840e-49 | -8.615850e-47 |
Msa0270270 | Msa0526410 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
Msa0303360 | Msa0526410 | 0.808870 | 2.504339e-50 | -8.615850e-47 |
Msa0344830 | Msa0526410 | 0.822932 | 1.817488e-53 | -8.615850e-47 |
Msa0344870 | Msa0526410 | 0.814210 | 1.730180e-51 | -8.615850e-47 |
Msa0347360 | Msa0526410 | 0.800175 | 1.630093e-48 | -8.615850e-47 |
Msa0488270 | Msa0526410 | 0.832535 | 8.943584e-56 | -8.615850e-47 |
Msa0489610 | Msa0526410 | 0.805869 | 1.084078e-49 | -8.615850e-47 |
Msa0498220 | Msa0526410 | 0.802721 | 4.904244e-49 | -8.615850e-47 |
Msa0500720 | Msa0526410 | 0.819721 | 1.000740e-52 | -8.615850e-47 |
Msa0505060 | Msa0526410 | 0.821120 | 4.781267e-53 | -8.615850e-47 |
Msa0517490 | Msa0526410 | 0.841900 | 3.589181e-58 | -8.615850e-47 |
Msa0519190 | Msa0526410 | 0.812957 | 3.263865e-51 | -8.615850e-47 |
Msa0526410 | Msa0598460 | 0.820874 | 5.446842e-53 | -8.615850e-47 |
Msa0526410 | Msa0607540 | 0.800936 | 1.140783e-48 | -8.615850e-47 |
Msa0526410 | Msa0621590 | 0.814229 | 1.713638e-51 | -8.615850e-47 |
Msa0526410 | Msa0638280 | 0.807969 | 3.897596e-50 | -8.615850e-47 |
Msa0526410 | Msa0638320 | 0.805534 | 1.274652e-49 | -8.615850e-47 |
Msa0526410 | Msa0660300 | 0.824565 | 7.533855e-54 | -8.615850e-47 |
Msa0526410 | Msa0677270 | 0.802056 | 6.722860e-49 | -8.615850e-47 |
Msa0526410 | Msa0696420 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
Msa0526410 | Msa0715110 | 0.800199 | 1.611916e-48 | -8.615850e-47 |
Msa0526410 | Msa0743260 | 0.819911 | 9.059122e-53 | -8.615850e-47 |
Msa0526410 | Msa0775260 | 0.805835 | 1.102064e-49 | -8.615850e-47 |
Msa0526410 | Msa0792090 | 0.810210 | 1.290948e-50 | -8.615850e-47 |
Msa0526410 | Msa0792260 | 0.845758 | 3.325357e-59 | -8.615850e-47 |
Msa0526410 | Msa0828540 | 0.802787 | 4.753931e-49 | -8.615850e-47 |
Msa0526410 | Msa0844900 | 0.806937 | 6.454067e-50 | -8.615850e-47 |
Msa0526410 | Msa0853170 | 0.808060 | 3.728274e-50 | -8.615850e-47 |
Msa0526410 | Msa0876850 | -0.814040 | 1.886339e-51 | -8.615850e-47 |
Msa0526410 | Msa0935850 | 0.829288 | 5.597399e-55 | -8.615850e-47 |
Msa0526410 | Msa0959010 | 0.819211 | 1.308112e-52 | -8.615850e-47 |
Msa0526410 | Msa0982270 | 0.831845 | 1.324668e-55 | -8.615850e-47 |
Msa0526410 | Msa0992490 | -0.802068 | 6.686920e-49 | -8.615850e-47 |
Msa0526410 | Msa1015060 | 0.807933 | 3.968059e-50 | -8.615850e-47 |
Msa0526410 | Msa1047720 | 0.803710 | 3.061912e-49 | -8.615850e-47 |
Msa0526410 | Msa1085920 | 0.988846 | 1.195263e-175 | -8.615850e-47 |
Msa0526410 | Msa1114350 | -0.800508 | 1.394437e-48 | -8.615850e-47 |
Msa0526410 | Msa1157020 | 0.803192 | 3.919744e-49 | -8.615850e-47 |
Msa0526410 | Msa1171800 | 0.975569 | 3.406933e-140 | -8.615850e-47 |
Msa0526410 | Msa1171870 | 0.802196 | 6.291530e-49 | -8.615850e-47 |
Msa0526410 | Msa1174310 | 0.801109 | 1.051376e-48 | -8.615850e-47 |
Msa0526410 | Msa1199560 | 0.821747 | 3.426240e-53 | -8.615850e-47 |
Msa0526410 | Msa1229600 | 0.807615 | 4.634809e-50 | -8.615850e-47 |
Msa0526410 | Msa1233500 | 0.803062 | 4.170375e-49 | -8.615850e-47 |
Msa0526410 | Msa1233890 | 0.807304 | 5.397023e-50 | -8.615850e-47 |
Msa0526410 | Msa1279210 | 0.807498 | 4.907878e-50 | -8.615850e-47 |
Msa0526410 | Msa1287650 | 0.827684 | 1.365832e-54 | -8.615850e-47 |
Msa0526410 | Msa1287680 | 0.827795 | 1.283964e-54 | -8.615850e-47 |
Msa0526410 | Msa1300350 | -0.834030 | 3.793300e-56 | -8.615850e-47 |
Msa0526410 | Msa1306360 | 0.988710 | 4.237882e-175 | -8.615850e-47 |
Msa0526410 | Msa1306430 | 0.805480 | 1.307885e-49 | -8.615850e-47 |
Msa0526410 | Msa1306750 | 0.846319 | 2.341111e-59 | -8.615850e-47 |
Msa0526410 | Msa1306760 | 0.800926 | 1.146095e-48 | -8.615850e-47 |
Msa0526410 | Msa1307740 | 0.833922 | 4.037241e-56 | -8.615850e-47 |
Msa0526410 | Msa1309880 | 0.831413 | 1.693400e-55 | -8.615850e-47 |
Msa0526410 | Msa1310210 | 0.821992 | 3.005838e-53 | -8.615850e-47 |
Msa0526410 | Msa1314770 | 0.813471 | 2.517621e-51 | -8.615850e-47 |
Msa0526410 | Msa1328700 | 0.817037 | 4.057891e-52 | -8.615850e-47 |
Msa0526410 | Msa1348600 | 0.834556 | 2.798721e-56 | -8.615850e-47 |
Msa0526410 | Msa1369530 | 0.815570 | 8.640345e-52 | -8.615850e-47 |
Msa0526410 | Msa1393410 | 0.817908 | 2.583783e-52 | -8.615850e-47 |
Msa0526410 | Msa1407650 | 0.805026 | 1.628236e-49 | -8.615850e-47 |
Msa0526410 | Msa1435420 | 0.815809 | 7.642439e-52 | -8.615850e-47 |
Msa0526410 | Msa1441190 | 0.811370 | 7.243496e-51 | -8.615850e-47 |
Msa0526410 | Msa1444250 | -0.800498 | 1.401046e-48 | -8.615850e-47 |
Msa0526410 | Msa1450180 | 0.805021 | 1.632192e-49 | -8.615850e-47 |
Msa0526410 | Msa1451620 | -0.841359 | 4.985433e-58 | -8.615850e-47 |
Msa0526410 | Msa1461250 | -0.818158 | 2.267791e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526410 | MtrunA17_Chr8g0387201 | 99.087 | 767 | 7 | 0 | 1 | 767 | 1 | 767 | 0.0 | 1591 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526410 | AT5G41370.1 | 85.547 | 768 | 105 | 5 | 1 | 764 | 1 | 766 | 0.0 | 1308 |
Msa0526410 | AT5G41360.1 | 84.252 | 762 | 116 | 3 | 6 | 764 | 5 | 765 | 0.0 | 1295 |
Msa0526410 | AT5G41360.2 | 83.574 | 761 | 118 | 4 | 6 | 763 | 5 | 761 | 0.0 | 1275 |
Find 179 sgRNAs with CRISPR-Local
Find 580 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACATGCTCGGAATTTATT+TGG | 0.143949 | 3_4:-80259951 | None:intergenic |
CATGATTCCACTGCAAATTA+TGG | 0.166887 | 3_4:+80255603 | Msa0526410:CDS |
TGATCAGGGTTACAGCTTTA+AGG | 0.171890 | 3_4:+80261205 | Msa0526410:CDS |
CTCCAACATGGGATAATTTA+AGG | 0.203128 | 3_4:-80257666 | None:intergenic |
ACATATAATATGGTTGCTTT+TGG | 0.236023 | 3_4:+80259090 | Msa0526410:CDS |
AACACCAACTAGGGACTTTC+CGG | 0.270811 | 3_4:-80258893 | None:intergenic |
CTAAGGCTCTTCTCTTGATA+TGG | 0.277696 | 3_4:-80258445 | None:intergenic |
AGGCTTCACCTGTCTCTTCT+TGG | 0.278361 | 3_4:-80259622 | None:intergenic |
ATCACACAAATCGTCCTCTT+TGG | 0.280975 | 3_4:+80255261 | Msa0526410:CDS |
ATGGGATAATTTAAGGCATT+TGG | 0.283714 | 3_4:-80257659 | None:intergenic |
TTTAGTTCCATCTCGAGGTC+TGG | 0.295958 | 3_4:-80258403 | None:intergenic |
CATTGGTTTGCGAAGTTTCA+TGG | 0.296729 | 3_4:-80260057 | None:intergenic |
CATACAGTTTGGGACCAATT+AGG | 0.307490 | 3_4:-80259485 | None:intergenic |
CCAATTTGCCTCATACAGTT+TGG | 0.314774 | 3_4:-80259496 | None:intergenic |
TGAATTATCACATTTGCTTC+AGG | 0.315902 | 3_4:-80260599 | None:intergenic |
AATTGGTTGGATCTTGTAAA+AGG | 0.316540 | 3_4:+80259513 | Msa0526410:CDS |
TTCGCTGTATGCTGCGGTTT+CGG | 0.319268 | 3_4:+80255497 | Msa0526410:CDS |
AGCGTCTGGGTCGTATTCTT+AGG | 0.321135 | 3_4:+80260660 | Msa0526410:CDS |
ACAGATCTGAACTTCCTAAT+TGG | 0.321620 | 3_4:+80259471 | Msa0526410:CDS |
CATATTTAGTCAAGTTCTAT+TGG | 0.326490 | 3_4:+80263316 | Msa0526410:three_prime_UTR |
TGTCTCTTTGCTGGATCTTT+CGG | 0.327780 | 3_4:-80263040 | None:intergenic |
TATTTGGATTCATCACATAA+AGG | 0.329096 | 3_4:-80259935 | None:intergenic |
AAACCCTCGTGTGATTAAAA+AGG | 0.329957 | 3_4:+80263095 | Msa0526410:exon |
ATATTTGCAGGTGCTGAAAA+AGG | 0.330555 | 3_4:+80254928 | Msa0526410:intron |
ATATGGCCGTGGTTGTGCTT+GGG | 0.332017 | 3_4:-80258428 | None:intergenic |
CCAAACTGTATGAGGCAAAT+TGG | 0.337223 | 3_4:+80259496 | Msa0526410:CDS |
CTTCGCAAACCAATGATATA+TGG | 0.342358 | 3_4:+80260065 | Msa0526410:CDS |
AACAGTATTTACGTCTTTGC+TGG | 0.343453 | 3_4:-80260222 | None:intergenic |
AATAAGTGGTGTCTCTTTGC+TGG | 0.346134 | 3_4:-80263049 | None:intergenic |
TCACACAAATCGTCCTCTTT+GGG | 0.353153 | 3_4:+80255262 | Msa0526410:CDS |
CACTTATTTAGAAAACGATT+TGG | 0.355765 | 3_4:+80263064 | Msa0526410:CDS |
ATTTGGATTCATCACATAAA+GGG | 0.355854 | 3_4:-80259934 | None:intergenic |
AGAATGGGGATTGCTGCTTA+TGG | 0.362406 | 3_4:+80259164 | Msa0526410:CDS |
AGCTTCCTAAAGAGATGATT+AGG | 0.364739 | 3_4:+80255574 | Msa0526410:CDS |
CATAATTTGCAGTGGAATCA+TGG | 0.369119 | 3_4:-80255602 | None:intergenic |
AAGAGCCTTAGTAAAATGTT+TGG | 0.369614 | 3_4:+80258457 | Msa0526410:CDS |
ATAAACCTAATCATCTCTTT+AGG | 0.372165 | 3_4:-80255579 | None:intergenic |
TGTTGTGACAACATATAATA+TGG | 0.372226 | 3_4:+80259080 | Msa0526410:CDS |
TTGGTGTTTCAGCAGCTTCC+CGG | 0.376812 | 3_4:+80258908 | Msa0526410:CDS |
GCGTCAAGAAGCACAGCGTC+TGG | 0.379944 | 3_4:+80260646 | Msa0526410:CDS |
CCATCGCCGAGCCCGTTTGC+AGG | 0.382900 | 3_4:+80255357 | Msa0526410:CDS |
CTTGTAGCACCATATATCAT+TGG | 0.385865 | 3_4:-80260074 | None:intergenic |
CAATTTGCCTCATACAGTTT+GGG | 0.388906 | 3_4:-80259495 | None:intergenic |
TAAATGGCAGGGAAAGCTTC+AGG | 0.390345 | 3_4:+80260936 | Msa0526410:intron |
GTATAAGACTAGATTAGATT+AGG | 0.396795 | 3_4:-80254810 | None:intergenic |
CCCTGTGTGGTGAGGTCACC+AGG | 0.399682 | 3_4:-80263266 | None:intergenic |
TTAGTTCCATCTCGAGGTCT+GGG | 0.406412 | 3_4:-80258402 | None:intergenic |
ATGATTCCACTGCAAATTAT+GGG | 0.410450 | 3_4:+80255604 | Msa0526410:CDS |
CTTAGTAAAATGTTTGGAAA+TGG | 0.416991 | 3_4:+80258463 | Msa0526410:CDS |
ACTAAATCTCACTGCAAACT+TGG | 0.417365 | 3_4:+80259327 | Msa0526410:CDS |
AGTCTTATACATCGAAATCA+TGG | 0.418433 | 3_4:+80254823 | Msa0526410:exon |
TCGGCTTGCTCTTGATCTGT+TGG | 0.423357 | 3_4:-80263021 | None:intergenic |
AGAAATAAGAAACAGAGAAT+GGG | 0.424172 | 3_4:+80259149 | Msa0526410:CDS |
GATATGGCCGTGGTTGTGCT+TGG | 0.426514 | 3_4:-80258429 | None:intergenic |
TATCACCACGTGCCCTTTCG+TGG | 0.435050 | 3_4:-80259989 | None:intergenic |
TCATCATCTCGATGATCAAC+TGG | 0.437109 | 3_4:+80262590 | Msa0526410:CDS |
AAGAAATAAGAAACAGAGAA+TGG | 0.440448 | 3_4:+80259148 | Msa0526410:CDS |
TATAAGACTAGATTAGATTA+GGG | 0.451389 | 3_4:-80254809 | None:intergenic |
TTATATATCTGAAGTGAGAA+TGG | 0.451997 | 3_4:-80254755 | None:intergenic |
CCTCTTTGGGCTTGTGACAA+TGG | 0.452599 | 3_4:+80255275 | Msa0526410:CDS |
TTTGTACCTGCAAACGGGCT+CGG | 0.455277 | 3_4:-80255363 | None:intergenic |
AATCATCTCTTTAGGAAGCT+TGG | 0.456652 | 3_4:-80255571 | None:intergenic |
CACTGCAAACTTGGGCTCAC+AGG | 0.460451 | 3_4:+80259336 | Msa0526410:CDS |
AATTGGTCCCAAACTGTATG+AGG | 0.461446 | 3_4:+80259488 | Msa0526410:CDS |
CAAGAGAAAGATTGTTATGA+TGG | 0.462522 | 3_4:+80263394 | Msa0526410:three_prime_UTR |
AGAGGACGATTTGTGTGATC+CGG | 0.463995 | 3_4:-80255257 | None:intergenic |
TCTCTTCACATGCTGGTTCA+AGG | 0.464065 | 3_4:+80260624 | Msa0526410:CDS |
ATGTACAGTGTGCTGAAGTA+TGG | 0.466560 | 3_4:+80259550 | Msa0526410:CDS |
AGGTATTGAAAACATTGCTC+AGG | 0.471562 | 3_4:+80255774 | Msa0526410:intron |
ACCTATCAGGTATTGAATGC+TGG | 0.476448 | 3_4:+80262689 | Msa0526410:intron |
TTCTCATAAATTACCACGAA+AGG | 0.478217 | 3_4:+80259976 | Msa0526410:CDS |
TCTCTTGTACTGTATATTCG+TGG | 0.478889 | 3_4:-80263378 | None:intergenic |
TAGCAAATTAGAGTTGAAAC+CGG | 0.479614 | 3_4:+80255238 | Msa0526410:CDS |
ATAGTTCTACCTTGTGGTGC+CGG | 0.479656 | 3_4:+80258874 | Msa0526410:CDS |
CTCTTCTCTTGATATGGCCG+TGG | 0.488835 | 3_4:-80258439 | None:intergenic |
CAAATCTAGATTACCTGAGC+AGG | 0.493252 | 3_4:-80256452 | None:intergenic |
AGTGCAATGTCAGGTGCAAA+AGG | 0.493706 | 3_4:+80262797 | Msa0526410:CDS |
CTGTATGCTGCGGTTTCGGT+TGG | 0.496346 | 3_4:+80255501 | Msa0526410:CDS |
GCGTCTGGGTCGTATTCTTA+GGG | 0.498202 | 3_4:+80260661 | Msa0526410:CDS |
TTGTATTCGTGCATCGACTC+TGG | 0.499316 | 3_4:-80255462 | None:intergenic |
ATTCAGATCTCTTCACATGC+TGG | 0.501954 | 3_4:+80260617 | Msa0526410:CDS |
GTTTAGGGTACTCATGGAGA+TGG | 0.502400 | 3_4:+80256314 | Msa0526410:intron |
CATTTACACACCTCTGGAAA+CGG | 0.502414 | 3_4:-80255672 | None:intergenic |
GTCGTCATCGTAAGCATCAT+CGG | 0.503028 | 3_4:-80255116 | None:intergenic |
CAATGATATATGGTGCTACA+AGG | 0.508056 | 3_4:+80260075 | Msa0526410:CDS |
GGATGGTTTATGTGGAGTAC+AGG | 0.509532 | 3_4:+80262819 | Msa0526410:CDS |
TGGTTGGATCTTGTAAAAGG+TGG | 0.512861 | 3_4:+80259516 | Msa0526410:CDS |
TACATAATTACATTAACTTG+TGG | 0.516375 | 3_4:+80263215 | Msa0526410:three_prime_UTR |
TCTTATACTCAAATATATCC+TGG | 0.516646 | 3_4:+80263248 | Msa0526410:three_prime_UTR |
TGCCGTCTCTGTGGATCAGT+GGG | 0.520735 | 3_4:+80258963 | Msa0526410:CDS |
GGATCGATGAGTGCAATGTC+AGG | 0.522160 | 3_4:+80262788 | Msa0526410:CDS |
TCTCATAAATTACCACGAAA+GGG | 0.522463 | 3_4:+80259977 | Msa0526410:CDS |
ACTGTATGAGGCAAATTGGT+TGG | 0.524427 | 3_4:+80259500 | Msa0526410:CDS |
TAAGAAGAATCGTTACTATG+TGG | 0.527424 | 3_4:+80255644 | Msa0526410:CDS |
TGCCTTAAATTATCCCATGT+TGG | 0.531333 | 3_4:+80257664 | Msa0526410:CDS |
GAGAGATTCCGTGGTAACGC+TGG | 0.532353 | 3_4:+80259054 | Msa0526410:CDS |
TGCAGCTACACTTGTGAGAG+AGG | 0.532637 | 3_4:+80259437 | Msa0526410:intron |
AAAAGTGCTCGTCGTTCTCA+AGG | 0.533168 | 3_4:+80262767 | Msa0526410:CDS |
AAGCTGCTGAAACACCAACT+AGG | 0.535810 | 3_4:-80258903 | None:intergenic |
ATGCCGTCTCTGTGGATCAG+TGG | 0.537416 | 3_4:+80258962 | Msa0526410:CDS |
AAGCTTCAGGATAGGATGGC+TGG | 0.541968 | 3_4:+80260949 | Msa0526410:CDS |
CCTGCAAACGGGCTCGGCGA+TGG | 0.542090 | 3_4:-80255357 | None:intergenic |
GAAATAAGAAACAGAGAATG+GGG | 0.543248 | 3_4:+80259150 | Msa0526410:CDS |
TGCAAAAGGGATGGTTTATG+TGG | 0.544520 | 3_4:+80262811 | Msa0526410:CDS |
ATAAATGTGTACCTGGGTAT+CGG | 0.546776 | 3_4:-80261016 | None:intergenic |
AGAGAACTCCAAGAAGAGAC+AGG | 0.548803 | 3_4:+80259614 | Msa0526410:CDS |
GACTTTCCCATAATTTGCAG+TGG | 0.549017 | 3_4:-80255610 | None:intergenic |
AACGACATATTTGTTCATCT+CGG | 0.550470 | 3_4:-80259014 | None:intergenic |
AGCTTGCCTCCATCTGATGA+AGG | 0.551771 | 3_4:+80262552 | Msa0526410:CDS |
CCTGGGTATCGGTCGACACA+AGG | 0.553236 | 3_4:-80261005 | None:intergenic |
ATTCGAAATTGATCCTGCTC+AGG | 0.555292 | 3_4:+80256439 | Msa0526410:CDS |
CGTCAAGAAGCACAGCGTCT+GGG | 0.556542 | 3_4:+80260647 | Msa0526410:CDS |
CCTTGTGTCGACCGATACCC+AGG | 0.557821 | 3_4:+80261005 | Msa0526410:CDS |
GCGAAGTTTCATGGCATACT+CGG | 0.560609 | 3_4:-80260048 | None:intergenic |
CTAAATCTCACTGCAAACTT+GGG | 0.561239 | 3_4:+80259328 | Msa0526410:CDS |
ACAAGGTAGAACTATGATAC+CGG | 0.568352 | 3_4:-80258866 | None:intergenic |
AAGTCATACTCCTCCAACAT+GGG | 0.569092 | 3_4:-80257677 | None:intergenic |
GTCTTATACATCGAAATCAT+GGG | 0.570971 | 3_4:+80254824 | Msa0526410:exon |
TATGGCCGTGGTTGTGCTTG+GGG | 0.571603 | 3_4:-80258427 | None:intergenic |
ATGACAATAATCAAGAATGC+AGG | 0.572001 | 3_4:+80263156 | Msa0526410:three_prime_UTR |
TTATGAGAAACTCACATGCT+CGG | 0.574806 | 3_4:-80259962 | None:intergenic |
AGCTGCTGAAACACCAACTA+GGG | 0.575072 | 3_4:-80258902 | None:intergenic |
CCTTCAGGTAGAGCAAGATC+CGG | 0.580416 | 3_4:+80258847 | Msa0526410:intron |
TCATAAGCTTGTTTGTACAA+AGG | 0.583537 | 3_4:-80255323 | None:intergenic |
ATAAGTATCATCATCATCAT+CGG | 0.584559 | 3_4:-80255089 | None:intergenic |
GGGATTGCTGCTTATGGACG+AGG | 0.585259 | 3_4:+80259170 | Msa0526410:CDS |
GGGTCGTATTCTTAGGGCAA+AGG | 0.588925 | 3_4:+80260667 | Msa0526410:CDS |
AGATGTATTACTCAACTAAG+AGG | 0.589026 | 3_4:+80261168 | Msa0526410:CDS |
GGGAAAGCTTCAGGATAGGA+TGG | 0.590165 | 3_4:+80260945 | Msa0526410:intron |
ACCGCATTCGCTGTATGCTG+CGG | 0.590897 | 3_4:+80255491 | Msa0526410:CDS |
AATGCTGGTGATGATGCAGT+TGG | 0.591042 | 3_4:+80262704 | Msa0526410:CDS |
TCCTGGTGACCTCACCACAC+AGG | 0.592766 | 3_4:+80263265 | Msa0526410:three_prime_UTR |
TTATTTGCAGCCATGTTGAG+AGG | 0.593332 | 3_4:+80260174 | Msa0526410:intron |
GATGATCAACTGGCACTACT+CGG | 0.594721 | 3_4:+80262600 | Msa0526410:CDS |
CTTAAATTATCCCATGTTGG+AGG | 0.600247 | 3_4:+80257667 | Msa0526410:CDS |
TGCAGTACTGGGCGTAACAA+AGG | 0.602107 | 3_4:+80262998 | Msa0526410:intron |
CCTGGTGACCTCACCACACA+GGG | 0.602612 | 3_4:+80263266 | Msa0526410:three_prime_UTR |
AAAGCACTAGGTGAGATTGA+AGG | 0.606763 | 3_4:+80256350 | Msa0526410:CDS |
TTTACAATCAGCAAAGCACT+AGG | 0.610051 | 3_4:+80256338 | Msa0526410:CDS |
CGAGATGATGATAGTGCAAG+CGG | 0.611865 | 3_4:-80262578 | None:intergenic |
GGTGCCGGAAAGTCCCTAGT+TGG | 0.612274 | 3_4:+80258889 | Msa0526410:CDS |
TAAAGCCCCAAGCACAACCA+CGG | 0.615153 | 3_4:+80258422 | Msa0526410:CDS |
GGGGCTTTAGTTCCATCTCG+AGG | 0.618388 | 3_4:-80258408 | None:intergenic |
AACATCAACCCTGTGTGGTG+AGG | 0.619584 | 3_4:-80263274 | None:intergenic |
AAGCGGGATCCTTCATCAGA+TGG | 0.620834 | 3_4:-80262561 | None:intergenic |
AATGTCAGGTGCAAAAGGGA+TGG | 0.623263 | 3_4:+80262802 | Msa0526410:CDS |
ATGATGCTATATCGCGAGCA+AGG | 0.624247 | 3_4:+80255798 | Msa0526410:CDS |
GGTATTGAAAACATTGCTCA+GGG | 0.625571 | 3_4:+80255775 | Msa0526410:intron |
ACCGCAGCATACAGCGAATG+CGG | 0.628106 | 3_4:-80255492 | None:intergenic |
TCAACTGGCACTACTCGGAA+AGG | 0.628539 | 3_4:+80262605 | Msa0526410:CDS |
TAATTATGTAACTTATGTTG+AGG | 0.632956 | 3_4:-80263202 | None:intergenic |
GGCAACAAATGCCGTCTCTG+TGG | 0.633215 | 3_4:+80258954 | Msa0526410:CDS |
CAACAACTCCAGCGTTACCA+CGG | 0.635366 | 3_4:-80259062 | None:intergenic |
TAGGATGGCTGGTGGCAAAG+AGG | 0.635488 | 3_4:+80260960 | Msa0526410:CDS |
GAAGTCATACTCCTCCAACA+TGG | 0.636793 | 3_4:-80257678 | None:intergenic |
GGCAGGGAAAGCTTCAGGAT+AGG | 0.638026 | 3_4:+80260941 | Msa0526410:intron |
AGCCCACTGATCCACAGAGA+CGG | 0.638964 | 3_4:-80258965 | None:intergenic |
GGTGAACCCAGACCTCGAGA+TGG | 0.640415 | 3_4:+80258396 | Msa0526410:intron |
GCGAGCAAGGATCACTTCTG+AGG | 0.642760 | 3_4:+80255811 | Msa0526410:CDS |
GGTATCATAGTTCTACCTTG+TGG | 0.642998 | 3_4:+80258868 | Msa0526410:CDS |
CGGGATCCTTCATCAGATGG+AGG | 0.648662 | 3_4:-80262558 | None:intergenic |
ATTATACAGACGCCACCGCA+TGG | 0.651372 | 3_4:-80263120 | None:intergenic |
GCATGATAAACAGGTGCACG+TGG | 0.651390 | 3_4:+80259269 | Msa0526410:intron |
GTGCAATGTCAGGTGCAAAA+GGG | 0.652794 | 3_4:+80262798 | Msa0526410:CDS |
GACAGCAAAGAGAGATTCCG+TGG | 0.654068 | 3_4:+80259045 | Msa0526410:CDS |
AGGGACTTTCCGGCACCACA+AGG | 0.657347 | 3_4:-80258883 | None:intergenic |
AGAAAGTCTCAAGGAAAATG+CGG | 0.658900 | 3_4:-80255298 | None:intergenic |
TGTGGAATCTCCGTTTCCAG+AGG | 0.660689 | 3_4:+80255662 | Msa0526410:CDS |
GAGATGATGATAGTGCAAGC+GGG | 0.661161 | 3_4:-80262577 | None:intergenic |
GAAACTAACGAATTTAGCAG+CGG | 0.670070 | 3_4:-80254974 | None:intergenic |
CTGGGTATCGGTCGACACAA+GGG | 0.670656 | 3_4:-80261004 | None:intergenic |
ACAAAGGTGAGAAAGTCTCA+AGG | 0.672300 | 3_4:-80255307 | None:intergenic |
GCTAAATCAAGCAGAAGTAG+CGG | 0.672882 | 3_4:+80256388 | Msa0526410:CDS |
CCATTGTCACAAGCCCAAAG+AGG | 0.674133 | 3_4:-80255275 | None:intergenic |
AATTACCACGAAAGGGCACG+TGG | 0.685034 | 3_4:+80259984 | Msa0526410:CDS |
CTTCAGGATAGGATGGCTGG+TGG | 0.687755 | 3_4:+80260952 | Msa0526410:CDS |
TACATCGAAATCATGGGACA+CGG | 0.694471 | 3_4:+80254830 | Msa0526410:exon |
AATCAAACATCAACCCTGTG+TGG | 0.698865 | 3_4:-80263279 | None:intergenic |
GATGATGCTTACGATGACGA+CGG | 0.737584 | 3_4:+80255118 | Msa0526410:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACATTTTTAAAGATTAAAA+AGG | - | chr3_4:80257010-80257029 | None:intergenic | 10.0% |
!! | AATAAAATAATTGAAATGAA+TGG | - | chr3_4:80257823-80257842 | None:intergenic | 10.0% |
!!! | ATATATAATGTTATTTGATT+GGG | - | chr3_4:80258250-80258269 | None:intergenic | 10.0% |
!!! | TATATATAATGTTATTTGAT+TGG | - | chr3_4:80258251-80258270 | None:intergenic | 10.0% |
!! | AATCAAATAACATTATATAT+AGG | + | chr3_4:80258250-80258269 | Msa0526410:intron | 10.0% |
!! | AATCTTTAGTTAAAATTATA+AGG | + | chr3_4:80259659-80259678 | Msa0526410:intron | 10.0% |
!! | AAAATAAAACTAAAAAAAAC+AGG | - | chr3_4:80260269-80260288 | None:intergenic | 10.0% |
!!! | TTTTTTTTAGTTTTATTTTG+AGG | + | chr3_4:80260270-80260289 | Msa0526410:intron | 10.0% |
!! | TTTATTAATTCTGAATTTAT+TGG | + | chr3_4:80260760-80260779 | Msa0526410:intron | 10.0% |
!!! | ATTTCAAAAAAATAGATTTT+GGG | - | chr3_4:80261511-80261530 | None:intergenic | 10.0% |
!!! | TATTTCAAAAAAATAGATTT+TGG | - | chr3_4:80261512-80261531 | None:intergenic | 10.0% |
!!! | AAAAAAAAAAACACTTTTTT+TGG | + | chr3_4:80261568-80261587 | Msa0526410:intron | 10.0% |
!!! | AAAAAAAAAACACTTTTTTT+GGG | + | chr3_4:80261569-80261588 | Msa0526410:intron | 10.0% |
!!! | TAAAAAAAAATACTTTTTTC+GGG | + | chr3_4:80261645-80261664 | Msa0526410:intron | 10.0% |
!! | TTTCAATTAATTATCTCATT+AGG | + | chr3_4:80255151-80255170 | Msa0526410:intron | 15.0% |
!! | TTCAATTAATTATCTCATTA+GGG | + | chr3_4:80255152-80255171 | Msa0526410:intron | 15.0% |
!! | ATAATAATAATACGACTAAA+TGG | - | chr3_4:80256534-80256553 | None:intergenic | 15.0% |
!! | TAGTCGTATTATTATTATAA+AGG | + | chr3_4:80256536-80256555 | Msa0526410:intron | 15.0% |
!!! | GAATTTGTTTTCTTAAAAAA+GGG | - | chr3_4:80256862-80256881 | None:intergenic | 15.0% |
!!! | TGAATTTGTTTTCTTAAAAA+AGG | - | chr3_4:80256863-80256882 | None:intergenic | 15.0% |
!! | ATGTAATTTATCTTCTTAAA+TGG | + | chr3_4:80257264-80257283 | Msa0526410:intron | 15.0% |
!!! | CTTTATTTAAAGTTTCAAAA+AGG | - | chr3_4:80257395-80257414 | None:intergenic | 15.0% |
!! | GAAACTTTAAATAAAGTTAA+AGG | + | chr3_4:80257399-80257418 | Msa0526410:intron | 15.0% |
!!! | AATTTAAAATAAAATTTGCC+GGG | - | chr3_4:80258553-80258572 | None:intergenic | 15.0% |
!!! | CAATTTAAAATAAAATTTGC+CGG | - | chr3_4:80258554-80258573 | None:intergenic | 15.0% |
!!! | TGTCTAAAATATTATGTTAA+CGG | + | chr3_4:80258690-80258709 | Msa0526410:intron | 15.0% |
!!! | ATAGATTATTTAAGTTAGAA+TGG | + | chr3_4:80260363-80260382 | Msa0526410:intron | 15.0% |
!!! | TAGATTATTTAAGTTAGAAT+GGG | + | chr3_4:80260364-80260383 | Msa0526410:intron | 15.0% |
!! | TAAAAAAAAAGATGTTAACA+TGG | - | chr3_4:80260500-80260519 | None:intergenic | 15.0% |
!! | AAATTTAGTATTCAATATGT+AGG | - | chr3_4:80260802-80260821 | None:intergenic | 15.0% |
!! | ATTCAAATTCATGAATTAAA+TGG | + | chr3_4:80260920-80260939 | Msa0526410:intron | 15.0% |
!! | ATCCAATAATCAATAATATA+TGG | - | chr3_4:80261053-80261072 | None:intergenic | 15.0% |
!!! | CGTTTGTTTTAATTTTTTTA+GGG | + | chr3_4:80261369-80261388 | Msa0526410:intron | 15.0% |
!!! | GTTTGTTTTAATTTTTTTAG+GGG | + | chr3_4:80261370-80261389 | Msa0526410:intron | 15.0% |
!!! | TTTTTTTTTAGTGTTTGTTT+AGG | + | chr3_4:80261414-80261433 | Msa0526410:intron | 15.0% |
!!! | ATCTATTTTTTTGAAATACA+AGG | + | chr3_4:80261514-80261533 | Msa0526410:intron | 15.0% |
!!! | ATAGTTTTTTTATATGTAAC+AGG | + | chr3_4:80262521-80262540 | Msa0526410:intron | 15.0% |
!! | TCTTAATTAAGAATTCAAAA+AGG | - | chr3_4:80262916-80262935 | None:intergenic | 15.0% |
!! | TATAAGACTAGATTAGATTA+GGG | - | chr3_4:80254812-80254831 | None:intergenic | 20.0% |
!! | TTAATCTTGATGAATTGATT+GGG | - | chr3_4:80254882-80254901 | None:intergenic | 20.0% |
!! | AATTTCAATTTCATATTTGC+AGG | + | chr3_4:80254916-80254935 | Msa0526410:intron | 20.0% |
!!! | TTTCTTATATTATTTTCCAC+AGG | + | chr3_4:80255045-80255064 | Msa0526410:intron | 20.0% |
!!! | TCATTAGGGTTTTTTTATTT+GGG | + | chr3_4:80255166-80255185 | Msa0526410:intron | 20.0% |
!! | TTCTAAACTACAATTGTATA+GGG | - | chr3_4:80256277-80256296 | None:intergenic | 20.0% |
!! | ATTCTAAACTACAATTGTAT+AGG | - | chr3_4:80256278-80256297 | None:intergenic | 20.0% |
!!! | TGAGTTTTTTTTTTTTTTGC+AGG | + | chr3_4:80256473-80256492 | Msa0526410:intron | 20.0% |
!!! | TTTTCTAAAATGCAATACAT+TGG | - | chr3_4:80256660-80256679 | None:intergenic | 20.0% |
!! | TTAAAAAATGTCAACAATGT+TGG | - | chr3_4:80257338-80257357 | None:intergenic | 20.0% |
!! | AAATAAAGTTAAAGGATTTC+TGG | + | chr3_4:80257407-80257426 | Msa0526410:intron | 20.0% |
!!! | TAGTTTTGCCTTAATAATAT+AGG | + | chr3_4:80257432-80257451 | Msa0526410:intron | 20.0% |
!!! | AGTTTTGCCTTAATAATATA+GGG | + | chr3_4:80257433-80257452 | Msa0526410:intron | 20.0% |
!! | TTATCTATACCTATGTATAA+AGG | + | chr3_4:80257757-80257776 | Msa0526410:intron | 20.0% |
!! | TATCTATACCTATGTATAAA+GGG | + | chr3_4:80257758-80257777 | Msa0526410:intron | 20.0% |
!! | CAAAAAATCAGTCATTTAAT+TGG | - | chr3_4:80257867-80257886 | None:intergenic | 20.0% |
!!! | TTTATTGGTTTAAATCATTG+TGG | + | chr3_4:80257986-80258005 | Msa0526410:intron | 20.0% |
!!! | TTATTGGTTTAAATCATTGT+GGG | + | chr3_4:80257987-80258006 | Msa0526410:intron | 20.0% |
!! | TCTGAAAAAAAAAATCATTG+TGG | + | chr3_4:80258010-80258029 | Msa0526410:intron | 20.0% |
!! | CTGAAAAAAAAAATCATTGT+GGG | + | chr3_4:80258011-80258030 | Msa0526410:intron | 20.0% |
!! | TGGTATCAACTTTATATATA+GGG | - | chr3_4:80258155-80258174 | None:intergenic | 20.0% |
!! | TTGGTATCAACTTTATATAT+AGG | - | chr3_4:80258156-80258175 | None:intergenic | 20.0% |
!! | GTTATTATCTTGCAAATTTA+TGG | + | chr3_4:80258320-80258339 | Msa0526410:intron | 20.0% |
!!! | TTTTTTTTTCTTTTTCCTAC+AGG | + | chr3_4:80258375-80258394 | Msa0526410:intron | 20.0% |
!!! | TTAAGAGGATTTTTTTTTGT+TGG | - | chr3_4:80258621-80258640 | None:intergenic | 20.0% |
!! | TATAACAACAACAAATTAAG+AGG | - | chr3_4:80258636-80258655 | None:intergenic | 20.0% |
!!! | GTCTAAAATATTATGTTAAC+GGG | + | chr3_4:80258691-80258710 | Msa0526410:intron | 20.0% |
!!! | TCTAAAATATTATGTTAACG+GGG | + | chr3_4:80258692-80258711 | Msa0526410:intron | 20.0% |
!! | TGTTAATACTATTGATATTG+TGG | + | chr3_4:80260468-80260487 | Msa0526410:intron | 20.0% |
!! | GTTAATACTATTGATATTGT+GGG | + | chr3_4:80260469-80260488 | Msa0526410:intron | 20.0% |
!! | AATACTTAAACTATCATTCA+AGG | + | chr3_4:80261092-80261111 | Msa0526410:intron | 20.0% |
!!! | AGGTATTTTCTTTCAATTTT+CGG | + | chr3_4:80261225-80261244 | Msa0526410:intron | 20.0% |
!!! | GCGTTTGTTTTAATTTTTTT+AGG | + | chr3_4:80261368-80261387 | Msa0526410:intron | 20.0% |
!!! | TATTTTTTTGAAATACAAGG+AGG | + | chr3_4:80261517-80261536 | Msa0526410:intron | 20.0% |
!! | CTTACTTTAAATTAGACAAA+GGG | - | chr3_4:80261785-80261804 | None:intergenic | 20.0% |
!! | ACTTACTTTAAATTAGACAA+AGG | - | chr3_4:80261786-80261805 | None:intergenic | 20.0% |
!!! | TTGTCTAATTTAAAGTAAGT+TGG | + | chr3_4:80261786-80261805 | Msa0526410:intron | 20.0% |
!!! | AATGAGTAAAAGCTTTTATT+TGG | + | chr3_4:80261927-80261946 | Msa0526410:intron | 20.0% |
!!! | AACTTATTTTTTATGCTCAA+TGG | + | chr3_4:80262392-80262411 | Msa0526410:intron | 20.0% |
!!! | TGAGAATTTGAAATTTTTGT+TGG | + | chr3_4:80262456-80262475 | Msa0526410:intron | 20.0% |
!! | ATTCTTAATTAAGAACTTGA+TGG | + | chr3_4:80262922-80262941 | Msa0526410:intron | 20.0% |
!! | TTCTTAATTAAGAACTTGAT+GGG | + | chr3_4:80262923-80262942 | Msa0526410:intron | 20.0% |
!! | TTAAATTCTTTGATGCTAAT+TGG | + | chr3_4:80262963-80262982 | Msa0526410:intron | 20.0% |
!! | TAATTATGTAACTTATGTTG+AGG | - | chr3_4:80263205-80263224 | None:intergenic | 20.0% |
!!! | TACATAATTACATTAACTTG+TGG | + | chr3_4:80263215-80263234 | Msa0526410:three_prime_UTR | 20.0% |
!!! | AAATTGTGTTTTAGACTTTT+AGG | + | chr3_4:80263420-80263439 | Msa0526410:three_prime_UTR | 20.0% |
!! | TTATATATCTGAAGTGAGAA+TGG | - | chr3_4:80254758-80254777 | None:intergenic | 25.0% |
! | GTATAAGACTAGATTAGATT+AGG | - | chr3_4:80254813-80254832 | None:intergenic | 25.0% |
! | GTTAATCTTGATGAATTGAT+TGG | - | chr3_4:80254883-80254902 | None:intergenic | 25.0% |
! | ATAAGTATCATCATCATCAT+CGG | - | chr3_4:80255092-80255111 | None:intergenic | 25.0% |
!!! | CTCATTAGGGTTTTTTTATT+TGG | + | chr3_4:80255165-80255184 | Msa0526410:intron | 25.0% |
!!! | CATTAGGGTTTTTTTATTTG+GGG | + | chr3_4:80255167-80255186 | Msa0526410:intron | 25.0% |
! | TTTGTGTTATGTTAATCAGA+AGG | + | chr3_4:80255200-80255219 | Msa0526410:intron | 25.0% |
! | TTAATCAGAAGGAAAAACAA+AGG | + | chr3_4:80255211-80255230 | Msa0526410:intron | 25.0% |
!! | AATGTTTTGTGATGAATGAT+AGG | + | chr3_4:80255439-80255458 | Msa0526410:intron | 25.0% |
! | ATAAACCTAATCATCTCTTT+AGG | - | chr3_4:80255582-80255601 | None:intergenic | 25.0% |
!! | GTTTTTGTAACAATTTTTGC+AGG | + | chr3_4:80255754-80255773 | Msa0526410:intron | 25.0% |
! | TTAACATGTTTGAATAGCTT+AGG | + | chr3_4:80255869-80255888 | Msa0526410:intron | 25.0% |
!! | GTATGATCCTTATTTATTCT+TGG | + | chr3_4:80255935-80255954 | Msa0526410:intron | 25.0% |
! | AACCATATTATACACAAAAC+AGG | - | chr3_4:80255997-80256016 | None:intergenic | 25.0% |
!! | TGTTTTGTGTATAATATGGT+TGG | + | chr3_4:80255996-80256015 | Msa0526410:intron | 25.0% |
!! | GTTTTGTGTATAATATGGTT+GGG | + | chr3_4:80255997-80256016 | Msa0526410:intron | 25.0% |
! | TCTAAACTACAATTGTATAG+GGG | - | chr3_4:80256276-80256295 | None:intergenic | 25.0% |
! | ATGGAAAACAAAGAGATTAT+CGG | - | chr3_4:80256515-80256534 | None:intergenic | 25.0% |
!! | TGATTATTTAGAACACTTCT+AGG | + | chr3_4:80256776-80256795 | Msa0526410:intron | 25.0% |
!! | ATGTAGTTTTTCCTATTACT+CGG | - | chr3_4:80256914-80256933 | None:intergenic | 25.0% |
! | TAATAGGAAAAACTACATCA+GGG | + | chr3_4:80256916-80256935 | Msa0526410:intron | 25.0% |
!!! | GTTGACATTTTTTAACACAA+AGG | + | chr3_4:80257343-80257362 | Msa0526410:intron | 25.0% |
!!! | ATTTTGGCCCTATATTATTA+AGG | - | chr3_4:80257443-80257462 | None:intergenic | 25.0% |
! | AGAAGATTAAATTTATGCTG+TGG | + | chr3_4:80257494-80257513 | Msa0526410:intron | 25.0% |
! | GAAGATTAAATTTATGCTGT+GGG | + | chr3_4:80257495-80257514 | Msa0526410:intron | 25.0% |
!! | AAAATTTGTGATTTGTGTAC+AGG | + | chr3_4:80257610-80257629 | Msa0526410:intron | 25.0% |
! | AGTAATGCTTTATATACTCA+TGG | + | chr3_4:80257716-80257735 | Msa0526410:intron | 25.0% |
! | ATCTATACCTATGTATAAAG+GGG | + | chr3_4:80257759-80257778 | Msa0526410:intron | 25.0% |
! | TTAATATCCCCTTTATACAT+AGG | - | chr3_4:80257769-80257788 | None:intergenic | 25.0% |
!! | TCTAATACTCACTCTTTTAT+TGG | + | chr3_4:80257971-80257990 | Msa0526410:intron | 25.0% |
! | ACTTTATATATAGGGATATG+AGG | - | chr3_4:80258147-80258166 | None:intergenic | 25.0% |
!!! | ATAAAGTTGATACCAAGTTT+TGG | + | chr3_4:80258160-80258179 | Msa0526410:intron | 25.0% |
! | AAAAAAACTACACCAAAACT+TGG | - | chr3_4:80258175-80258194 | None:intergenic | 25.0% |
! | ACATTATATATAGGCATATC+AGG | + | chr3_4:80258259-80258278 | Msa0526410:intron | 25.0% |
!!! | CAGAGCTATTTTCAATTTTA+AGG | + | chr3_4:80258295-80258314 | Msa0526410:intron | 25.0% |
!! | CATTTCCAAACATTTTACTA+AGG | - | chr3_4:80258465-80258484 | None:intergenic | 25.0% |
! | CTTAGTAAAATGTTTGGAAA+TGG | + | chr3_4:80258463-80258482 | Msa0526410:CDS | 25.0% |
! | TAAAATGTTTGGAAATGGTA+TGG | + | chr3_4:80258468-80258487 | Msa0526410:intron | 25.0% |
! | CATTGCATTCTTGTTAAATT+TGG | + | chr3_4:80258523-80258542 | Msa0526410:intron | 25.0% |
! | CTTAATTACTTAAACAACAG+TGG | + | chr3_4:80258763-80258782 | Msa0526410:intron | 25.0% |
! | TGTTGTGACAACATATAATA+TGG | + | chr3_4:80259080-80259099 | Msa0526410:CDS | 25.0% |
!!! | ACATATAATATGGTTGCTTT+TGG | + | chr3_4:80259090-80259109 | Msa0526410:CDS | 25.0% |
!!! | CATATAATATGGTTGCTTTT+GGG | + | chr3_4:80259091-80259110 | Msa0526410:CDS | 25.0% |
!!! | ATATAATATGGTTGCTTTTG+GGG | + | chr3_4:80259092-80259111 | Msa0526410:CDS | 25.0% |
! | AAGAAATAAGAAACAGAGAA+TGG | + | chr3_4:80259148-80259167 | Msa0526410:CDS | 25.0% |
! | AGAAATAAGAAACAGAGAAT+GGG | + | chr3_4:80259149-80259168 | Msa0526410:CDS | 25.0% |
! | GAGGTAATTGTTAAGATTTA+CGG | + | chr3_4:80259189-80259208 | Msa0526410:intron | 25.0% |
!! | AATGACTTTTCGAAACATAT+GGG | - | chr3_4:80259301-80259320 | None:intergenic | 25.0% |
!! | TAATGACTTTTCGAAACATA+TGG | - | chr3_4:80259302-80259321 | None:intergenic | 25.0% |
! | AAAATTATAAGGAGCAATTG+TGG | + | chr3_4:80259670-80259689 | Msa0526410:intron | 25.0% |
! | ATTTGGATTCATCACATAAA+GGG | - | chr3_4:80259937-80259956 | None:intergenic | 25.0% |
! | TATTTGGATTCATCACATAA+AGG | - | chr3_4:80259938-80259957 | None:intergenic | 25.0% |
!!! | AGTATTAACAAGAAGTACTA+AGG | - | chr3_4:80260458-80260477 | None:intergenic | 25.0% |
! | TAGTATTCAATATGTAGGAT+GGG | - | chr3_4:80260797-80260816 | None:intergenic | 25.0% |
! | TTAGTATTCAATATGTAGGA+TGG | - | chr3_4:80260798-80260817 | None:intergenic | 25.0% |
!! | TAAATTTCATTTGTTTGCTG+TGG | + | chr3_4:80260815-80260834 | Msa0526410:intron | 25.0% |
! | AAATTCATGAATTAAATGGC+AGG | + | chr3_4:80260924-80260943 | Msa0526410:intron | 25.0% |
! | AATTCATGAATTAAATGGCA+GGG | + | chr3_4:80260925-80260944 | Msa0526410:intron | 25.0% |
!! | GGCCATATATTATTGATTAT+TGG | + | chr3_4:80261048-80261067 | Msa0526410:intron | 25.0% |
!!! | CAGCAATTTTTAATTGATCA+GGG | + | chr3_4:80261191-80261210 | Msa0526410:CDS | 25.0% |
! | TTTGTACATTTACTTTACTG+TGG | + | chr3_4:80261296-80261315 | Msa0526410:intron | 25.0% |
! | TGACTCAAATGAAAACTATT+AGG | + | chr3_4:80261475-80261494 | Msa0526410:intron | 25.0% |
! | GTAAACAAACAAAATAGCTT+CGG | + | chr3_4:80261594-80261613 | Msa0526410:intron | 25.0% |
! | TAAACAAACACAAATAGCTT+CGG | + | chr3_4:80261671-80261690 | Msa0526410:intron | 25.0% |
! | CTAATTGAAATTGTTTCACT+AGG | - | chr3_4:80261818-80261837 | None:intergenic | 25.0% |
!!! | AACTTCTTTTAAGTAGGTTA+TGG | - | chr3_4:80261860-80261879 | None:intergenic | 25.0% |
! | TGCTTTGTATATTTCAAGAA+GGG | - | chr3_4:80261883-80261902 | None:intergenic | 25.0% |
! | TTGCTTTGTATATTTCAAGA+AGG | - | chr3_4:80261884-80261903 | None:intergenic | 25.0% |
! | TGTTAGGAAAAAATAAGAAG+AGG | + | chr3_4:80262116-80262135 | Msa0526410:intron | 25.0% |
!! | GTATCTTGGAAATATCATTT+TGG | + | chr3_4:80262241-80262260 | Msa0526410:intron | 25.0% |
! | AAATTTCAAATTCTCAAGCA+TGG | - | chr3_4:80262452-80262471 | None:intergenic | 25.0% |
!! | CAAATCGTTTTCTAAATAAG+TGG | - | chr3_4:80263066-80263085 | None:intergenic | 25.0% |
! | CACTTATTTAGAAAACGATT+TGG | + | chr3_4:80263064-80263083 | Msa0526410:CDS | 25.0% |
! | TCTTATACTCAAATATATCC+TGG | + | chr3_4:80263248-80263267 | Msa0526410:three_prime_UTR | 25.0% |
! | CATATTTAGTCAAGTTCTAT+TGG | + | chr3_4:80263316-80263335 | Msa0526410:three_prime_UTR | 25.0% |
! | AGTCTTATACATCGAAATCA+TGG | + | chr3_4:80254823-80254842 | Msa0526410:exon | 30.0% |
GTCTTATACATCGAAATCAT+GGG | + | chr3_4:80254824-80254843 | Msa0526410:exon | 30.0% | |
! | GATGATGATGATGATACTTA+TGG | + | chr3_4:80255091-80255110 | Msa0526410:CDS | 30.0% |
TAGCAAATTAGAGTTGAAAC+CGG | + | chr3_4:80255238-80255257 | Msa0526410:CDS | 30.0% | |
! | TCATAAGCTTGTTTGTACAA+AGG | - | chr3_4:80255326-80255345 | None:intergenic | 30.0% |
! | AAATTTTTGTACCTGCAAAC+GGG | - | chr3_4:80255371-80255390 | None:intergenic | 30.0% |
! | CAAATTTTTGTACCTGCAAA+CGG | - | chr3_4:80255372-80255391 | None:intergenic | 30.0% |
ATGATTCCACTGCAAATTAT+GGG | + | chr3_4:80255604-80255623 | Msa0526410:CDS | 30.0% | |
TAAGAAGAATCGTTACTATG+TGG | + | chr3_4:80255644-80255663 | Msa0526410:CDS | 30.0% | |
AATAATTACCCCACAAACAA+TGG | - | chr3_4:80255850-80255869 | None:intergenic | 30.0% | |
! | TGATCCTTATTTATTCTTGG+TGG | + | chr3_4:80255938-80255957 | Msa0526410:intron | 30.0% |
! | GATCCTTATTTATTCTTGGT+GGG | + | chr3_4:80255939-80255958 | Msa0526410:intron | 30.0% |
AAACCCACCAAGAATAAATA+AGG | - | chr3_4:80255945-80255964 | None:intergenic | 30.0% | |
CTACCTCTCTGTAATTTATT+GGG | + | chr3_4:80255971-80255990 | Msa0526410:intron | 30.0% | |
!! | ATCTCTTAGGTTTTTGGATT+GGG | - | chr3_4:80256112-80256131 | None:intergenic | 30.0% |
!! | AATCTCTTAGGTTTTTGGAT+TGG | - | chr3_4:80256113-80256132 | None:intergenic | 30.0% |
AATACAACATGGAATCTCTT+AGG | - | chr3_4:80256125-80256144 | None:intergenic | 30.0% | |
ACTAAAAAAGTTAGCGGTAA+AGG | - | chr3_4:80256172-80256191 | None:intergenic | 30.0% | |
AACCACACTAAAAAAGTTAG+CGG | - | chr3_4:80256178-80256197 | None:intergenic | 30.0% | |
ACTACCATGAATATTGTAGT+CGG | + | chr3_4:80256217-80256236 | Msa0526410:intron | 30.0% | |
!!! | GGATCGTTGATTTAATTTTG+TGG | - | chr3_4:80256568-80256587 | None:intergenic | 30.0% |
! | ATTTTTCGCATGACAAATGA+TGG | - | chr3_4:80256589-80256608 | None:intergenic | 30.0% |
TGCGAAAAATGATGTTTGAT+TGG | + | chr3_4:80256599-80256618 | Msa0526410:intron | 30.0% | |
GCGAAAAATGATGTTTGATT+GGG | + | chr3_4:80256600-80256619 | Msa0526410:intron | 30.0% | |
! | ATCTGCATTTAAAAAGCACA+TGG | - | chr3_4:80256747-80256766 | None:intergenic | 30.0% |
! | AAGAGGAATTGCTATCATTT+TGG | - | chr3_4:80256839-80256858 | None:intergenic | 30.0% |
! | GTTTTCTTAAAAAAGGGAAG+AGG | - | chr3_4:80256856-80256875 | None:intergenic | 30.0% |
TTGTAGAATTACCGAGTAAT+AGG | + | chr3_4:80256900-80256919 | Msa0526410:intron | 30.0% | |
GTAATAGGAAAAACTACATC+AGG | + | chr3_4:80256915-80256934 | Msa0526410:intron | 30.0% | |
AATAGGAAAAACTACATCAG+GGG | + | chr3_4:80256917-80256936 | Msa0526410:intron | 30.0% | |
CAATGATCATGTTCACAAAT+TGG | - | chr3_4:80257075-80257094 | None:intergenic | 30.0% | |
TGATGAGTTACATACTGTAA+TGG | + | chr3_4:80257200-80257219 | Msa0526410:intron | 30.0% | |
AAATGGTTAAGTAAGACTTC+TGG | + | chr3_4:80257281-80257300 | Msa0526410:intron | 30.0% | |
!! | CCAAACTTCATTTTTCATCT+AGG | - | chr3_4:80257314-80257333 | None:intergenic | 30.0% |
CCTAGATGAAAAATGAAGTT+TGG | + | chr3_4:80257311-80257330 | Msa0526410:intron | 30.0% | |
! | GTTTATCCTTTTTGTCAAGT+TGG | - | chr3_4:80257370-80257389 | None:intergenic | 30.0% |
! | GTGAAACTCAAGGAATATTT+TGG | - | chr3_4:80257459-80257478 | None:intergenic | 30.0% |
TGTGATTTCTGATAACAATC+TGG | - | chr3_4:80257550-80257569 | None:intergenic | 30.0% | |
! | ATGGGATAATTTAAGGCATT+TGG | - | chr3_4:80257662-80257681 | None:intergenic | 30.0% |
AAAATTGAACCCACACAAAA+TGG | + | chr3_4:80258045-80258064 | Msa0526410:intron | 30.0% | |
AAGAGCCTTAGTAAAATGTT+TGG | + | chr3_4:80258457-80258476 | Msa0526410:CDS | 30.0% | |
TAGAACTTTATGTGCTAGTA+CGG | + | chr3_4:80258660-80258679 | Msa0526410:intron | 30.0% | |
AATATTATGTTAACGGGGTT+TGG | + | chr3_4:80258697-80258716 | Msa0526410:intron | 30.0% | |
!!! | AAAGACAGCTCTTTTTTATC+CGG | - | chr3_4:80258930-80258949 | None:intergenic | 30.0% |
AAAAAAGAGCTGTCTTTGTT+TGG | + | chr3_4:80258933-80258952 | Msa0526410:CDS | 30.0% | |
AACGACATATTTGTTCATCT+CGG | - | chr3_4:80259017-80259036 | None:intergenic | 30.0% | |
!!! | TATAATATGGTTGCTTTTGG+GGG | + | chr3_4:80259093-80259112 | Msa0526410:CDS | 30.0% |
GAAATAAGAAACAGAGAATG+GGG | + | chr3_4:80259150-80259169 | Msa0526410:CDS | 30.0% | |
AAGAACAGAAAGAAGATTTC+AGG | - | chr3_4:80259235-80259254 | None:intergenic | 30.0% | |
AATTGGTTGGATCTTGTAAA+AGG | + | chr3_4:80259513-80259532 | Msa0526410:CDS | 30.0% | |
! | GCGAAAAATTCTTTTGTCAT+TGG | - | chr3_4:80259579-80259598 | None:intergenic | 30.0% |
ATACATTGCAGTTTCTGTTT+AGG | + | chr3_4:80259715-80259734 | Msa0526410:intron | 30.0% | |
TTCTCATAAATTACCACGAA+AGG | + | chr3_4:80259976-80259995 | Msa0526410:CDS | 30.0% | |
TCTCATAAATTACCACGAAA+GGG | + | chr3_4:80259977-80259996 | Msa0526410:CDS | 30.0% | |
GAATATGTTAAAGCACATAC+TGG | + | chr3_4:80260322-80260341 | Msa0526410:intron | 30.0% | |
ATATCCTTACGAGTTTCATT+AGG | + | chr3_4:80260388-80260407 | Msa0526410:intron | 30.0% | |
AGAATAAAAGAAACGATGCA+AGG | - | chr3_4:80260552-80260571 | None:intergenic | 30.0% | |
TGAATTATCACATTTGCTTC+AGG | - | chr3_4:80260602-80260621 | None:intergenic | 30.0% | |
TATTTCCCTGTTGTATGTTA+TGG | + | chr3_4:80260723-80260742 | Msa0526410:intron | 30.0% | |
AGTTACCATAACATACAACA+GGG | - | chr3_4:80260731-80260750 | None:intergenic | 30.0% | |
AAGTTACCATAACATACAAC+AGG | - | chr3_4:80260732-80260751 | None:intergenic | 30.0% | |
CATGAAATAAATGTGTACCT+GGG | - | chr3_4:80261025-80261044 | None:intergenic | 30.0% | |
ACATGAAATAAATGTGTACC+TGG | - | chr3_4:80261026-80261045 | None:intergenic | 30.0% | |
GTACACATTTATTTCATGTC+AGG | + | chr3_4:80261027-80261046 | Msa0526410:intron | 30.0% | |
ACTATCATTCAAGGAGTTTA+TGG | + | chr3_4:80261101-80261120 | Msa0526410:intron | 30.0% | |
AGATGTATTACTCAACTAAG+AGG | + | chr3_4:80261168-80261187 | Msa0526410:CDS | 30.0% | |
!! | GCAGCAATTTTTAATTGATC+AGG | + | chr3_4:80261190-80261209 | Msa0526410:CDS | 30.0% |
AAATTACCACAAGTGCAATA+GGG | - | chr3_4:80261257-80261276 | None:intergenic | 30.0% | |
ACAAATTCATGTGAATCTTG+AGG | - | chr3_4:80261281-80261300 | None:intergenic | 30.0% | |
AAGTTGTCAATGTGTTATCT+TGG | + | chr3_4:80261324-80261343 | Msa0526410:intron | 30.0% | |
AGTTGTCAATGTGTTATCTT+GGG | + | chr3_4:80261325-80261344 | Msa0526410:intron | 30.0% | |
! | AAAAGCTTTTACTCATTCAC+AGG | - | chr3_4:80261924-80261943 | None:intergenic | 30.0% |
!! | GTAAAAGCTTTTATTTGGTG+CGG | + | chr3_4:80261932-80261951 | Msa0526410:intron | 30.0% |
! | TACTATAACCAAAGTACTCT+AGG | + | chr3_4:80261960-80261979 | Msa0526410:intron | 30.0% |
!! | ATTAGGTTTGTTGAAGGAAA+TGG | + | chr3_4:80261988-80262007 | Msa0526410:intron | 30.0% |
AACATAAATTCCTCACAACA+TGG | - | chr3_4:80262100-80262119 | None:intergenic | 30.0% | |
TGTTGTGAGGAATTTATGTT+AGG | + | chr3_4:80262100-80262119 | Msa0526410:intron | 30.0% | |
GGAAAAAATAAGAAGAGGAA+TGG | + | chr3_4:80262121-80262140 | Msa0526410:intron | 30.0% | |
! | ATATTGAGAATTTGAGACTG+AGG | + | chr3_4:80262204-80262223 | Msa0526410:intron | 30.0% |
! | TATTGAGAATTTGAGACTGA+GGG | + | chr3_4:80262205-80262224 | Msa0526410:intron | 30.0% |
!! | TGGAAATATCATTTTGGTGT+TGG | + | chr3_4:80262247-80262266 | Msa0526410:intron | 30.0% |
!!! | TATCATTTTGGTGTTGGTTA+TGG | + | chr3_4:80262253-80262272 | Msa0526410:intron | 30.0% |
!!! | ATCATTTTGGTGTTGGTTAT+GGG | + | chr3_4:80262254-80262273 | Msa0526410:intron | 30.0% |
AGTAGCAATTAAAAGACAGA+AGG | - | chr3_4:80262339-80262358 | None:intergenic | 30.0% | |
AGTTGTCTTCATGCAATATT+TGG | - | chr3_4:80262376-80262395 | None:intergenic | 30.0% | |
AACTCAATTCCAATTCAACA+GGG | - | chr3_4:80262644-80262663 | None:intergenic | 30.0% | |
ATGACAATAATCAAGAATGC+AGG | + | chr3_4:80263156-80263175 | Msa0526410:three_prime_UTR | 30.0% | |
CAAGAGAAAGATTGTTATGA+TGG | + | chr3_4:80263394-80263413 | Msa0526410:three_prime_UTR | 30.0% | |
!! | ATATTTGCAGGTGCTGAAAA+AGG | + | chr3_4:80254928-80254947 | Msa0526410:intron | 35.0% |
GAAACTAACGAATTTAGCAG+CGG | - | chr3_4:80254977-80254996 | None:intergenic | 35.0% | |
AGAAAGTCTCAAGGAAAATG+CGG | - | chr3_4:80255301-80255320 | None:intergenic | 35.0% | |
! | AATCATCTCTTTAGGAAGCT+TGG | - | chr3_4:80255574-80255593 | None:intergenic | 35.0% |
AGCTTCCTAAAGAGATGATT+AGG | + | chr3_4:80255574-80255593 | Msa0526410:CDS | 35.0% | |
! | CATAATTTGCAGTGGAATCA+TGG | - | chr3_4:80255605-80255624 | None:intergenic | 35.0% |
CATGATTCCACTGCAAATTA+TGG | + | chr3_4:80255603-80255622 | Msa0526410:CDS | 35.0% | |
TAACATCATTTACACACCTC+TGG | - | chr3_4:80255681-80255700 | None:intergenic | 35.0% | |
!! | CTACTTTTACCAATCATTGC+TGG | + | chr3_4:80255717-80255736 | Msa0526410:intron | 35.0% |
GAAATCTTACCAGCAATGAT+TGG | - | chr3_4:80255729-80255748 | None:intergenic | 35.0% | |
ATTGCTGGTAAGATTTCATG+TGG | + | chr3_4:80255732-80255751 | Msa0526410:intron | 35.0% | |
!! | AGGTATTGAAAACATTGCTC+AGG | + | chr3_4:80255774-80255793 | Msa0526410:intron | 35.0% |
! | GGTATTGAAAACATTGCTCA+GGG | + | chr3_4:80255775-80255794 | Msa0526410:intron | 35.0% |
TGATCACATCCATTGTTTGT+GGG | + | chr3_4:80255838-80255857 | Msa0526410:intron | 35.0% | |
TAAATTACAGAGAGGTAGCA+CGG | - | chr3_4:80255969-80255988 | None:intergenic | 35.0% | |
GCTACCTCTCTGTAATTTAT+TGG | + | chr3_4:80255970-80255989 | Msa0526410:intron | 35.0% | |
! | GGCCTGTTTTGTGTATAATA+TGG | + | chr3_4:80255992-80256011 | Msa0526410:intron | 35.0% |
! | CATGGAATCTCTTAGGTTTT+TGG | - | chr3_4:80256118-80256137 | None:intergenic | 35.0% |
!!! | TACCGCTAACTTTTTTAGTG+TGG | + | chr3_4:80256173-80256192 | Msa0526410:intron | 35.0% |
AAGACCGACTACAATATTCA+TGG | - | chr3_4:80256224-80256243 | None:intergenic | 35.0% | |
AACTACAATTGTATAGGGGA+TGG | - | chr3_4:80256272-80256291 | None:intergenic | 35.0% | |
CCTAAACAAAAACAGCAACA+GGG | - | chr3_4:80256301-80256320 | None:intergenic | 35.0% | |
!!! | CCTGTTGCTGTTTTTGTTTA+GGG | + | chr3_4:80256299-80256318 | Msa0526410:intron | 35.0% |
!! | GTTTTTGTTTAGGGTACTCA+TGG | + | chr3_4:80256308-80256327 | Msa0526410:intron | 35.0% |
! | TTTACAATCAGCAAAGCACT+AGG | + | chr3_4:80256338-80256357 | Msa0526410:CDS | 35.0% |
CATGTCTCAGGAAAAGAAAA+TGG | + | chr3_4:80256628-80256647 | Msa0526410:intron | 35.0% | |
TGTAATGATGCATTCTTGTC+TGG | + | chr3_4:80256701-80256720 | Msa0526410:intron | 35.0% | |
GTAATGATGCATTCTTGTCT+GGG | + | chr3_4:80256702-80256721 | Msa0526410:intron | 35.0% | |
CATAGATGACAGTTGAAACA+GGG | - | chr3_4:80256808-80256827 | None:intergenic | 35.0% | |
TCATAGATGACAGTTGAAAC+AGG | - | chr3_4:80256809-80256828 | None:intergenic | 35.0% | |
AAAACAAATTCAGCAGTGCA+TGG | + | chr3_4:80256871-80256890 | Msa0526410:intron | 35.0% | |
ATAGGAAAAACTACATCAGG+GGG | + | chr3_4:80256918-80256937 | Msa0526410:intron | 35.0% | |
GACGCGAAAAAAGTAAACAA+AGG | - | chr3_4:80256979-80256998 | None:intergenic | 35.0% | |
!! | AGTGGACTAAGAATGAAAGT+AGG | - | chr3_4:80257045-80257064 | None:intergenic | 35.0% |
! | TCACAAATTGGTAGCAAAAG+TGG | - | chr3_4:80257063-80257082 | None:intergenic | 35.0% |
CACCAAAATTAGACTCTTGT+TGG | + | chr3_4:80257126-80257145 | Msa0526410:intron | 35.0% | |
! | TGCCAACAAGAGTCTAATTT+TGG | - | chr3_4:80257131-80257150 | None:intergenic | 35.0% |
AAAGGACCAACTTGACAAAA+AGG | + | chr3_4:80257361-80257380 | Msa0526410:intron | 35.0% | |
!!! | GTTTTTTGTCGTGAAACTCA+AGG | - | chr3_4:80257469-80257488 | None:intergenic | 35.0% |
AGAAATCACACTAGAGTAGT+TGG | + | chr3_4:80257560-80257579 | Msa0526410:intron | 35.0% | |
TGCCTTAAATTATCCCATGT+TGG | + | chr3_4:80257664-80257683 | Msa0526410:CDS | 35.0% | |
CTCCAACATGGGATAATTTA+AGG | - | chr3_4:80257669-80257688 | None:intergenic | 35.0% | |
CTTAAATTATCCCATGTTGG+AGG | + | chr3_4:80257667-80257686 | Msa0526410:CDS | 35.0% | |
! | TCATGGTGTTGAAATCTTTG+AGG | + | chr3_4:80257733-80257752 | Msa0526410:intron | 35.0% |
! | TTGTGTGGGTTCAATTTTCA+AGG | - | chr3_4:80258043-80258062 | None:intergenic | 35.0% |
TCTAACACTCACTCTCTTAT+TGG | - | chr3_4:80258092-80258111 | None:intergenic | 35.0% | |
AATAAGAGAGTGAGTGTTAG+AGG | + | chr3_4:80258091-80258110 | Msa0526410:intron | 35.0% | |
ATAAGAGAGTGAGTGTTAGA+GGG | + | chr3_4:80258092-80258111 | Msa0526410:intron | 35.0% | |
CTTGTTAAATTTGGAGAACC+CGG | + | chr3_4:80258532-80258551 | Msa0526410:intron | 35.0% | |
TGTTGGAACAATACTGACAT+GGG | - | chr3_4:80258604-80258623 | None:intergenic | 35.0% | |
TTGTTGGAACAATACTGACA+TGG | - | chr3_4:80258605-80258624 | None:intergenic | 35.0% | |
ACAAGGTAGAACTATGATAC+CGG | - | chr3_4:80258869-80258888 | None:intergenic | 35.0% | |
!!! | AAGACAGCTCTTTTTTATCC+GGG | - | chr3_4:80258929-80258948 | None:intergenic | 35.0% |
! | GGGCTTTTCAGTTTAAACTA+TGG | + | chr3_4:80258983-80259002 | Msa0526410:CDS | 35.0% |
AAAGAAGATTTCAGGCAAGA+AGG | - | chr3_4:80259227-80259246 | None:intergenic | 35.0% | |
ACTAAATCTCACTGCAAACT+TGG | + | chr3_4:80259327-80259346 | Msa0526410:CDS | 35.0% | |
CTAAATCTCACTGCAAACTT+GGG | + | chr3_4:80259328-80259347 | Msa0526410:CDS | 35.0% | |
ATTATTTCACTCAGCAGAAG+AGG | - | chr3_4:80259408-80259427 | None:intergenic | 35.0% | |
ACAGATCTGAACTTCCTAAT+TGG | + | chr3_4:80259471-80259490 | Msa0526410:CDS | 35.0% | |
CAATTTGCCTCATACAGTTT+GGG | - | chr3_4:80259498-80259517 | None:intergenic | 35.0% | |
AAGATTTACATAGTTCCCAG+AGG | - | chr3_4:80259645-80259664 | None:intergenic | 35.0% | |
ACAGAAACTGCAATGTATCA+TGG | - | chr3_4:80259713-80259732 | None:intergenic | 35.0% | |
TGAATTCAAGCAAGTGAACT+AGG | - | chr3_4:80259805-80259824 | None:intergenic | 35.0% | |
TTGTTGATCATTACATGTGC+AGG | + | chr3_4:80259911-80259930 | Msa0526410:intron | 35.0% | |
TCACATGCTCGGAATTTATT+TGG | - | chr3_4:80259954-80259973 | None:intergenic | 35.0% | |
TTATGAGAAACTCACATGCT+CGG | - | chr3_4:80259965-80259984 | None:intergenic | 35.0% | |
CTTCGCAAACCAATGATATA+TGG | + | chr3_4:80260065-80260084 | Msa0526410:CDS | 35.0% | |
CTTGTAGCACCATATATCAT+TGG | - | chr3_4:80260077-80260096 | None:intergenic | 35.0% | |
!! | CAATGATATATGGTGCTACA+AGG | + | chr3_4:80260075-80260094 | Msa0526410:CDS | 35.0% |
!!! | GTCTTTTGAAGCTGTGTTTT+GGG | + | chr3_4:80260118-80260137 | Msa0526410:intron | 35.0% |
!!! | TCTTTTGAAGCTGTGTTTTG+GGG | + | chr3_4:80260119-80260138 | Msa0526410:intron | 35.0% |
! | GAATTTTTGTCCTCTCAACA+TGG | - | chr3_4:80260187-80260206 | None:intergenic | 35.0% |
TGAGAGGACAAAAATTCTAC+AGG | + | chr3_4:80260190-80260209 | Msa0526410:CDS | 35.0% | |
AACAGTATTTACGTCTTTGC+TGG | - | chr3_4:80260225-80260244 | None:intergenic | 35.0% | |
AAAAACAGGAACAGATACCT+TGG | - | chr3_4:80260255-80260274 | None:intergenic | 35.0% | |
CTAACCTAATGAAACTCGTA+AGG | - | chr3_4:80260395-80260414 | None:intergenic | 35.0% | |
! | GCATCGTTTCTTTTATTCTC+AGG | + | chr3_4:80260553-80260572 | Msa0526410:intron | 35.0% |
! | CGTTTCTTTTATTCTCAGGT+TGG | + | chr3_4:80260557-80260576 | Msa0526410:intron | 35.0% |
TTCAATATGTAGGATGGGTA+TGG | - | chr3_4:80260792-80260811 | None:intergenic | 35.0% | |
!! | ATTTGTTTGCTGTGGAAAGT+GGG | + | chr3_4:80260823-80260842 | Msa0526410:intron | 35.0% |
ATAAATGTGTACCTGGGTAT+CGG | - | chr3_4:80261019-80261038 | None:intergenic | 35.0% | |
CAAATTACCACAAGTGCAAT+AGG | - | chr3_4:80261258-80261277 | None:intergenic | 35.0% | |
GATAACACATTGACAACTTC+AGG | - | chr3_4:80261323-80261342 | None:intergenic | 35.0% | |
GTTGTCAATGTGTTATCTTG+GGG | + | chr3_4:80261326-80261345 | Msa0526410:intron | 35.0% | |
TTGGGGCAAGAATGATTATT+TGG | + | chr3_4:80261343-80261362 | Msa0526410:intron | 35.0% | |
TGGGGCAAGAATGATTATTT+GGG | + | chr3_4:80261344-80261363 | Msa0526410:intron | 35.0% | |
!! | GAAGGGAACTTCTTTTAAGT+AGG | - | chr3_4:80261866-80261885 | None:intergenic | 35.0% |
! | AATGTCTTCCTAGAGTACTT+TGG | - | chr3_4:80261971-80261990 | None:intergenic | 35.0% |
! | AAGTACTCTAGGAAGACATT+AGG | + | chr3_4:80261971-80261990 | Msa0526410:intron | 35.0% |
!! | GAAGACATTAGGTTTGTTGA+AGG | + | chr3_4:80261982-80262001 | Msa0526410:intron | 35.0% |
TTTAAGCCTGCAATCTCATT+TGG | - | chr3_4:80262048-80262067 | None:intergenic | 35.0% | |
AAATGAGATTGCAGGCTTAA+AGG | + | chr3_4:80262047-80262066 | Msa0526410:intron | 35.0% | |
AATGAGATTGCAGGCTTAAA+GGG | + | chr3_4:80262048-80262067 | Msa0526410:intron | 35.0% | |
ACAGAAGGATGAAGATTGAA+TGG | - | chr3_4:80262324-80262343 | None:intergenic | 35.0% | |
TCTTCATGCAATATTTGGCA+CGG | - | chr3_4:80262371-80262390 | None:intergenic | 35.0% | |
CAACTCAATTCCAATTCAAC+AGG | - | chr3_4:80262645-80262664 | None:intergenic | 35.0% | |
! | GTTGTTGATTGAGAACTAAC+TGG | + | chr3_4:80262661-80262680 | Msa0526410:intron | 35.0% |
AAACCCTCGTGTGATTAAAA+AGG | + | chr3_4:80263095-80263114 | Msa0526410:exon | 35.0% | |
! | GTTCCTTTTTAATCACACGA+GGG | - | chr3_4:80263101-80263120 | None:intergenic | 35.0% |
GTGATTAAAAAGGAACCATG+CGG | + | chr3_4:80263105-80263124 | Msa0526410:three_prime_UTR | 35.0% | |
TCTCTTGTACTGTATATTCG+TGG | - | chr3_4:80263381-80263400 | None:intergenic | 35.0% | |
TACATCGAAATCATGGGACA+CGG | + | chr3_4:80254830-80254849 | Msa0526410:exon | 40.0% | |
!!! | CCTTTTTTGGAATCTTCCTG+TGG | - | chr3_4:80255064-80255083 | None:intergenic | 40.0% |
CCACAGGAAGATTCCAAAAA+AGG | + | chr3_4:80255061-80255080 | Msa0526410:intron | 40.0% | |
!!! | ATCATCGGCGAATCCTTTTT+TGG | - | chr3_4:80255077-80255096 | None:intergenic | 40.0% |
ATCACACAAATCGTCCTCTT+TGG | + | chr3_4:80255261-80255280 | Msa0526410:CDS | 40.0% | |
TCACACAAATCGTCCTCTTT+GGG | + | chr3_4:80255262-80255281 | Msa0526410:CDS | 40.0% | |
ACAAAGGTGAGAAAGTCTCA+AGG | - | chr3_4:80255310-80255329 | None:intergenic | 40.0% | |
! | GACTTTCCCATAATTTGCAG+TGG | - | chr3_4:80255613-80255632 | None:intergenic | 40.0% |
! | CATTTACACACCTCTGGAAA+CGG | - | chr3_4:80255675-80255694 | None:intergenic | 40.0% |
GTGATCACATCCATTGTTTG+TGG | + | chr3_4:80255837-80255856 | Msa0526410:intron | 40.0% | |
GATCACATCCATTGTTTGTG+GGG | + | chr3_4:80255839-80255858 | Msa0526410:intron | 40.0% | |
AGGCCCAATAAATTACAGAG+AGG | - | chr3_4:80255977-80255996 | None:intergenic | 40.0% | |
AGTACGAAAACCTATCCAAC+AGG | - | chr3_4:80256026-80256045 | None:intergenic | 40.0% | |
GATTCCATGTTGTATTCGAC+TGG | + | chr3_4:80256129-80256148 | Msa0526410:intron | 40.0% | |
GAAACCAGTCGAATACAACA+TGG | - | chr3_4:80256136-80256155 | None:intergenic | 40.0% | |
!! | GTATTCGACTGGTTTCTCAT+AGG | + | chr3_4:80256140-80256159 | Msa0526410:intron | 40.0% |
TTGCAGTTTATACACCCTCT+TGG | + | chr3_4:80256242-80256261 | Msa0526410:intron | 40.0% | |
TGCAGTTTATACACCCTCTT+GGG | + | chr3_4:80256243-80256262 | Msa0526410:intron | 40.0% | |
!!! | CCCTGTTGCTGTTTTTGTTT+AGG | + | chr3_4:80256298-80256317 | Msa0526410:intron | 40.0% |
CCCTAAACAAAAACAGCAAC+AGG | - | chr3_4:80256302-80256321 | None:intergenic | 40.0% | |
! | AAAGCACTAGGTGAGATTGA+AGG | + | chr3_4:80256350-80256369 | Msa0526410:CDS | 40.0% |
GCTAAATCAAGCAGAAGTAG+CGG | + | chr3_4:80256388-80256407 | Msa0526410:CDS | 40.0% | |
ATTCGAAATTGATCCTGCTC+AGG | + | chr3_4:80256439-80256458 | Msa0526410:CDS | 40.0% | |
CAAATCTAGATTACCTGAGC+AGG | - | chr3_4:80256455-80256474 | None:intergenic | 40.0% | |
TAGGAAAAACTACATCAGGG+GGG | + | chr3_4:80256919-80256938 | Msa0526410:intron | 40.0% | |
AAGTCATACTCCTCCAACAT+GGG | - | chr3_4:80257680-80257699 | None:intergenic | 40.0% | |
! | GTGTTGCTAGCATTACTCAT+AGG | - | chr3_4:80257949-80257968 | None:intergenic | 40.0% |
ATTGAACCCACACAAAATGG+TGG | + | chr3_4:80258048-80258067 | Msa0526410:intron | 40.0% | |
TTGAACCCACACAAAATGGT+GGG | + | chr3_4:80258049-80258068 | Msa0526410:intron | 40.0% | |
! | TATGTCCCACCATTTTGTGT+GGG | - | chr3_4:80258057-80258076 | None:intergenic | 40.0% |
CTAAGGCTCTTCTCTTGATA+TGG | - | chr3_4:80258448-80258467 | None:intergenic | 40.0% | |
ATGTTTGGAAATGGTATGGC+TGG | + | chr3_4:80258472-80258491 | Msa0526410:intron | 40.0% | |
! | GGATTAGCATAACTTAGTGC+TGG | + | chr3_4:80258718-80258737 | Msa0526410:intron | 40.0% |
! | GGTATCATAGTTCTACCTTG+TGG | + | chr3_4:80258868-80258887 | Msa0526410:CDS | 40.0% |
CTGTTCTTATCCATCGTACA+TGG | + | chr3_4:80259247-80259266 | Msa0526410:intron | 40.0% | |
GTTTATCATGCCATGTACGA+TGG | - | chr3_4:80259260-80259279 | None:intergenic | 40.0% | |
TCGTACATGGCATGATAAAC+AGG | + | chr3_4:80259260-80259279 | Msa0526410:intron | 40.0% | |
! | ACTTTTCGAAACATATGGGC+AGG | - | chr3_4:80259297-80259316 | None:intergenic | 40.0% |
! | CATACAGTTTGGGACCAATT+AGG | - | chr3_4:80259488-80259507 | None:intergenic | 40.0% |
AATTGGTCCCAAACTGTATG+AGG | + | chr3_4:80259488-80259507 | Msa0526410:CDS | 40.0% | |
CCAATTTGCCTCATACAGTT+TGG | - | chr3_4:80259499-80259518 | None:intergenic | 40.0% | |
CCAAACTGTATGAGGCAAAT+TGG | + | chr3_4:80259496-80259515 | Msa0526410:CDS | 40.0% | |
ACTGTATGAGGCAAATTGGT+TGG | + | chr3_4:80259500-80259519 | Msa0526410:CDS | 40.0% | |
TGGTTGGATCTTGTAAAAGG+TGG | + | chr3_4:80259516-80259535 | Msa0526410:CDS | 40.0% | |
ATGTACAGTGTGCTGAAGTA+TGG | + | chr3_4:80259550-80259569 | Msa0526410:CDS | 40.0% | |
!! | CATTGGTTTGCGAAGTTTCA+TGG | - | chr3_4:80260060-80260079 | None:intergenic | 40.0% |
!!! | CGTCTTTTGAAGCTGTGTTT+TGG | + | chr3_4:80260117-80260136 | Msa0526410:intron | 40.0% |
TCTCAACATGGCTGCAAATA+AGG | - | chr3_4:80260175-80260194 | None:intergenic | 40.0% | |
TTATTTGCAGCCATGTTGAG+AGG | + | chr3_4:80260174-80260193 | Msa0526410:intron | 40.0% | |
!! | ACTGGTCTAGCATTTTGTTG+AGG | + | chr3_4:80260340-80260359 | Msa0526410:intron | 40.0% |
ATTCAGATCTCTTCACATGC+TGG | + | chr3_4:80260617-80260636 | Msa0526410:CDS | 40.0% | |
!! | CATTTGTTTGCTGTGGAAAG+TGG | + | chr3_4:80260822-80260841 | Msa0526410:intron | 40.0% |
! | TCAATAATGCCTTTTGCCAG+TGG | + | chr3_4:80260885-80260904 | Msa0526410:intron | 40.0% |
! | CAATAATGCCTTTTGCCAGT+GGG | + | chr3_4:80260886-80260905 | Msa0526410:intron | 40.0% |
CGTTTACTGCTTTCGTTTAC+AGG | + | chr3_4:80261145-80261164 | Msa0526410:intron | 40.0% | |
TGATCAGGGTTACAGCTTTA+AGG | + | chr3_4:80261205-80261224 | Msa0526410:CDS | 40.0% | |
AATTCCTCACAACATGGTCT+TGG | - | chr3_4:80262094-80262113 | None:intergenic | 40.0% | |
GAATGGAAAGAATGCTGATG+CGG | + | chr3_4:80262138-80262157 | Msa0526410:intron | 40.0% | |
CAGAGAACATTGTTCTCTGT+AGG | + | chr3_4:80262277-80262296 | Msa0526410:intron | 40.0% | |
CTTCATGCAATATTTGGCAC+GGG | - | chr3_4:80262370-80262389 | None:intergenic | 40.0% | |
AAAAAAACCTGCTCGAACTG+TGG | + | chr3_4:80262418-80262437 | Msa0526410:intron | 40.0% | |
AAATTCTCAAGCATGGCATC+GGG | - | chr3_4:80262445-80262464 | None:intergenic | 40.0% | |
CAAATTCTCAAGCATGGCAT+CGG | - | chr3_4:80262446-80262465 | None:intergenic | 40.0% | |
! | AGACCTTGGCAAGATAGTTT+TGG | - | chr3_4:80262485-80262504 | None:intergenic | 40.0% |
GCATGTATAGATTGAGACCT+TGG | - | chr3_4:80262499-80262518 | None:intergenic | 40.0% | |
TCATCATCTCGATGATCAAC+TGG | + | chr3_4:80262590-80262609 | Msa0526410:CDS | 40.0% | |
CAATTCAACAGGGATACAGA+TGG | - | chr3_4:80262634-80262653 | None:intergenic | 40.0% | |
CATCTGTATCCCTGTTGAAT+TGG | + | chr3_4:80262632-80262651 | Msa0526410:intron | 40.0% | |
!! | ACCTATCAGGTATTGAATGC+TGG | + | chr3_4:80262689-80262708 | Msa0526410:intron | 40.0% |
ACCAGCATTCAATACCTGAT+AGG | - | chr3_4:80262693-80262712 | None:intergenic | 40.0% | |
TGCAAAAGGGATGGTTTATG+TGG | + | chr3_4:80262811-80262830 | Msa0526410:CDS | 40.0% | |
TGTCTCTTTGCTGGATCTTT+CGG | - | chr3_4:80263043-80263062 | None:intergenic | 40.0% | |
AATAAGTGGTGTCTCTTTGC+TGG | - | chr3_4:80263052-80263071 | None:intergenic | 40.0% | |
! | GGTTCCTTTTTAATCACACG+AGG | - | chr3_4:80263102-80263121 | None:intergenic | 40.0% |
ATTAAAAAGGAACCATGCGG+TGG | + | chr3_4:80263108-80263127 | Msa0526410:three_prime_UTR | 40.0% | |
AATCAAACATCAACCCTGTG+TGG | - | chr3_4:80263282-80263301 | None:intergenic | 40.0% | |
!!! | GCGGCTTTGAGCTTTTTGAA+GGG | - | chr3_4:80254958-80254977 | None:intergenic | 45.0% |
!!! | AGCGGCTTTGAGCTTTTTGA+AGG | - | chr3_4:80254959-80254978 | None:intergenic | 45.0% |
GTCGTCATCGTAAGCATCAT+CGG | - | chr3_4:80255119-80255138 | None:intergenic | 45.0% | |
GATGATGCTTACGATGACGA+CGG | + | chr3_4:80255118-80255137 | Msa0526410:CDS | 45.0% | |
AGAGGACGATTTGTGTGATC+CGG | - | chr3_4:80255260-80255279 | None:intergenic | 45.0% | |
!! | TTGTATTCGTGCATCGACTC+TGG | - | chr3_4:80255465-80255484 | None:intergenic | 45.0% |
ATGATGCTATATCGCGAGCA+AGG | + | chr3_4:80255798-80255817 | Msa0526410:CDS | 45.0% | |
ACTGTCTGTCTCTATACCCA+TGG | + | chr3_4:80255895-80255914 | Msa0526410:intron | 45.0% | |
! | TCTATACCCATGGTGATGAG+TGG | + | chr3_4:80255905-80255924 | Msa0526410:intron | 45.0% |
AATATGGTTGGGTGACCTGT+TGG | + | chr3_4:80256008-80256027 | Msa0526410:intron | 45.0% | |
!!! | CTCTTACAGGCTGGTTTTGT+AGG | - | chr3_4:80256080-80256099 | None:intergenic | 45.0% |
ACAAAACCAGCCTGTAAGAG+TGG | + | chr3_4:80256080-80256099 | Msa0526410:intron | 45.0% | |
CAAAACCAGCCTGTAAGAGT+GGG | + | chr3_4:80256081-80256100 | Msa0526410:intron | 45.0% | |
! | GTTTAGGGTACTCATGGAGA+TGG | + | chr3_4:80256314-80256333 | Msa0526410:intron | 45.0% |
AGGAAAAACTACATCAGGGG+GGG | + | chr3_4:80256920-80256939 | Msa0526410:intron | 45.0% | |
GAAGTCATACTCCTCCAACA+TGG | - | chr3_4:80257681-80257700 | None:intergenic | 45.0% | |
! | GTATGTCCCACCATTTTGTG+TGG | - | chr3_4:80258058-80258077 | None:intergenic | 45.0% |
TTAGTTCCATCTCGAGGTCT+GGG | - | chr3_4:80258405-80258424 | None:intergenic | 45.0% | |
! | TTTAGTTCCATCTCGAGGTC+TGG | - | chr3_4:80258406-80258425 | None:intergenic | 45.0% |
! | CTTTTATCATCTGCCCCTTC+AGG | + | chr3_4:80258832-80258851 | Msa0526410:intron | 45.0% |
! | ATAGTTCTACCTTGTGGTGC+CGG | + | chr3_4:80258874-80258893 | Msa0526410:CDS | 45.0% |
AACACCAACTAGGGACTTTC+CGG | - | chr3_4:80258896-80258915 | None:intergenic | 45.0% | |
AGCTGCTGAAACACCAACTA+GGG | - | chr3_4:80258905-80258924 | None:intergenic | 45.0% | |
AAGCTGCTGAAACACCAACT+AGG | - | chr3_4:80258906-80258925 | None:intergenic | 45.0% | |
!!! | TGGTTGCTTTTGGGGGTAAA+CGG | + | chr3_4:80259100-80259119 | Msa0526410:CDS | 45.0% |
! | AGAATGGGGATTGCTGCTTA+TGG | + | chr3_4:80259164-80259183 | Msa0526410:CDS | 45.0% |
ACAGGTATGCTGTTATGCAC+AGG | + | chr3_4:80259354-80259373 | Msa0526410:intron | 45.0% | |
AGAGAACTCCAAGAAGAGAC+AGG | + | chr3_4:80259614-80259633 | Msa0526410:CDS | 45.0% | |
ATGATCTTCACACATGCGCA+AGG | + | chr3_4:80259838-80259857 | Msa0526410:intron | 45.0% | |
GCGAAGTTTCATGGCATACT+CGG | - | chr3_4:80260051-80260070 | None:intergenic | 45.0% | |
!! | TCTCTTCACATGCTGGTTCA+AGG | + | chr3_4:80260624-80260643 | Msa0526410:CDS | 45.0% |
TAAATGGCAGGGAAAGCTTC+AGG | + | chr3_4:80260936-80260955 | Msa0526410:intron | 45.0% | |
TGTTCGCCAAATGAGATTGC+AGG | + | chr3_4:80262039-80262058 | Msa0526410:intron | 45.0% | |
GATTGCAGGCTTAAAGGGAT+AGG | + | chr3_4:80262053-80262072 | Msa0526410:intron | 45.0% | |
! | AATTTGAGACTGAGGGAGAG+TGG | + | chr3_4:80262212-80262231 | Msa0526410:intron | 45.0% |
! | ATTTGAGACTGAGGGAGAGT+GGG | + | chr3_4:80262213-80262232 | Msa0526410:intron | 45.0% |
!!! | CCTTGGCAAGATAGTTTTGG+TGG | - | chr3_4:80262482-80262501 | None:intergenic | 45.0% |
CCACCAAAACTATCTTGCCA+AGG | + | chr3_4:80262479-80262498 | Msa0526410:intron | 45.0% | |
! | GAGATGATGATAGTGCAAGC+GGG | - | chr3_4:80262580-80262599 | None:intergenic | 45.0% |
! | CGAGATGATGATAGTGCAAG+CGG | - | chr3_4:80262581-80262600 | None:intergenic | 45.0% |
GATGATCAACTGGCACTACT+CGG | + | chr3_4:80262600-80262619 | Msa0526410:CDS | 45.0% | |
CTAACTGGCGTTTACCTATC+AGG | + | chr3_4:80262676-80262695 | Msa0526410:intron | 45.0% | |
! | AATGCTGGTGATGATGCAGT+TGG | + | chr3_4:80262704-80262723 | Msa0526410:CDS | 45.0% |
!! | AAAAGTGCTCGTCGTTCTCA+AGG | + | chr3_4:80262767-80262786 | Msa0526410:CDS | 45.0% |
AGTGCAATGTCAGGTGCAAA+AGG | + | chr3_4:80262797-80262816 | Msa0526410:CDS | 45.0% | |
GTGCAATGTCAGGTGCAAAA+GGG | + | chr3_4:80262798-80262817 | Msa0526410:CDS | 45.0% | |
AATGTCAGGTGCAAAAGGGA+TGG | + | chr3_4:80262802-80262821 | Msa0526410:CDS | 45.0% | |
GGATGGTTTATGTGGAGTAC+AGG | + | chr3_4:80262819-80262838 | Msa0526410:CDS | 45.0% | |
ACTTGAGATGTACCAGCACA+CGG | - | chr3_4:80262883-80262902 | None:intergenic | 45.0% | |
! | CTGGTACATCTCAAGTTGCT+GGG | + | chr3_4:80262887-80262906 | Msa0526410:intron | 45.0% |
TTTCTTCCCCTATGCAGTAC+TGG | + | chr3_4:80262986-80263005 | Msa0526410:intron | 45.0% | |
TTCTTCCCCTATGCAGTACT+GGG | + | chr3_4:80262987-80263006 | Msa0526410:intron | 45.0% | |
!! | AAAAAAAAAAAACTATAAAT+AGG | - | chr3_4:80257906-80257925 | None:intergenic | 5.0% |
!!! | TTAAAAAAAAATACTTTTTT+CGG | + | chr3_4:80261644-80261663 | Msa0526410:intron | 5.0% |
CCATTGTCACAAGCCCAAAG+AGG | - | chr3_4:80255278-80255297 | None:intergenic | 50.0% | |
CCTCTTTGGGCTTGTGACAA+TGG | + | chr3_4:80255275-80255294 | Msa0526410:CDS | 50.0% | |
! | TTTGTACCTGCAAACGGGCT+CGG | - | chr3_4:80255366-80255385 | None:intergenic | 50.0% |
TTCGCTGTATGCTGCGGTTT+CGG | + | chr3_4:80255497-80255516 | Msa0526410:CDS | 50.0% | |
TGTGGAATCTCCGTTTCCAG+AGG | + | chr3_4:80255662-80255681 | Msa0526410:CDS | 50.0% | |
CTGAAGCCACTCATCACCAT+GGG | - | chr3_4:80255914-80255933 | None:intergenic | 50.0% | |
ACTGAAGCCACTCATCACCA+TGG | - | chr3_4:80255915-80255934 | None:intergenic | 50.0% | |
TCTAACCCACTCTTACAGGC+TGG | - | chr3_4:80256089-80256108 | None:intergenic | 50.0% | |
TGGGTCTAACCCACTCTTAC+AGG | - | chr3_4:80256093-80256112 | None:intergenic | 50.0% | |
TAGGGGATGGAATCCCAAGA+GGG | - | chr3_4:80256259-80256278 | None:intergenic | 50.0% | |
ATAGGGGATGGAATCCCAAG+AGG | - | chr3_4:80256260-80256279 | None:intergenic | 50.0% | |
GATTGGGTCGTTCATGTCTC+AGG | + | chr3_4:80256616-80256635 | Msa0526410:intron | 50.0% | |
GGAAAAACTACATCAGGGGG+GGG | + | chr3_4:80256921-80256940 | Msa0526410:intron | 50.0% | |
TAAAGCCCCAAGCACAACCA+CGG | + | chr3_4:80258422-80258441 | Msa0526410:CDS | 50.0% | |
ATATGGCCGTGGTTGTGCTT+GGG | - | chr3_4:80258431-80258450 | None:intergenic | 50.0% | |
CTCTTCTCTTGATATGGCCG+TGG | - | chr3_4:80258442-80258461 | None:intergenic | 50.0% | |
! | TATGGCTGGCAGCTTTTGCA+AGG | + | chr3_4:80258486-80258505 | Msa0526410:intron | 50.0% |
! | ATGGCTGGCAGCTTTTGCAA+GGG | + | chr3_4:80258487-80258506 | Msa0526410:intron | 50.0% |
! | TTTGCAAGGGCATGTGTCAC+TGG | + | chr3_4:80258500-80258519 | Msa0526410:intron | 50.0% |
GGATCTTGCTCTACCTGAAG+GGG | - | chr3_4:80258848-80258867 | None:intergenic | 50.0% | |
CGGATCTTGCTCTACCTGAA+GGG | - | chr3_4:80258849-80258868 | None:intergenic | 50.0% | |
CCTTCAGGTAGAGCAAGATC+CGG | + | chr3_4:80258847-80258866 | Msa0526410:intron | 50.0% | |
! | TTGGTGTTTCAGCAGCTTCC+CGG | + | chr3_4:80258908-80258927 | Msa0526410:CDS | 50.0% |
GACAGCAAAGAGAGATTCCG+TGG | + | chr3_4:80259045-80259064 | Msa0526410:CDS | 50.0% | |
CAACAACTCCAGCGTTACCA+CGG | - | chr3_4:80259065-80259084 | None:intergenic | 50.0% | |
GCATGATAAACAGGTGCACG+TGG | + | chr3_4:80259269-80259288 | Msa0526410:intron | 50.0% | |
TCACTCAGCAGAAGAGGCTT+TGG | - | chr3_4:80259402-80259421 | None:intergenic | 50.0% | |
TGCAGCTACACTTGTGAGAG+AGG | + | chr3_4:80259437-80259456 | Msa0526410:intron | 50.0% | |
AGGCTTCACCTGTCTCTTCT+TGG | - | chr3_4:80259625-80259644 | None:intergenic | 50.0% | |
AAGAGACAGGTGAAGCCTCT+GGG | + | chr3_4:80259627-80259646 | Msa0526410:intron | 50.0% | |
! | AATTACCACGAAAGGGCACG+TGG | + | chr3_4:80259984-80260003 | Msa0526410:CDS | 50.0% |
!! | TATGGTGCTACAAGGTGCTG+TGG | + | chr3_4:80260083-80260102 | Msa0526410:intron | 50.0% |
AGCGTCTGGGTCGTATTCTT+AGG | + | chr3_4:80260660-80260679 | Msa0526410:CDS | 50.0% | |
GCGTCTGGGTCGTATTCTTA+GGG | + | chr3_4:80260661-80260680 | Msa0526410:CDS | 50.0% | |
GGGTCGTATTCTTAGGGCAA+AGG | + | chr3_4:80260667-80260686 | Msa0526410:CDS | 50.0% | |
GGGAAAGCTTCAGGATAGGA+TGG | + | chr3_4:80260945-80260964 | Msa0526410:intron | 50.0% | |
AAGCTTCAGGATAGGATGGC+TGG | + | chr3_4:80260949-80260968 | Msa0526410:CDS | 50.0% | |
CTCACTCCCTATTGCACTTG+TGG | + | chr3_4:80261248-80261267 | Msa0526410:intron | 50.0% | |
CTGTCCAAGACCATGTTGTG+AGG | + | chr3_4:80262087-80262106 | Msa0526410:intron | 50.0% | |
TGATGCGGCAGAGAGAGAAA+GGG | + | chr3_4:80262153-80262172 | Msa0526410:intron | 50.0% | |
AGCTTGCCTCCATCTGATGA+AGG | + | chr3_4:80262552-80262571 | Msa0526410:CDS | 50.0% | |
AAGCGGGATCCTTCATCAGA+TGG | - | chr3_4:80262564-80262583 | None:intergenic | 50.0% | |
TCAACTGGCACTACTCGGAA+AGG | + | chr3_4:80262605-80262624 | Msa0526410:CDS | 50.0% | |
GGATCGATGAGTGCAATGTC+AGG | + | chr3_4:80262788-80262807 | Msa0526410:CDS | 50.0% | |
ACGGCAGGCGTTATCATATC+AGG | - | chr3_4:80262864-80262883 | None:intergenic | 50.0% | |
! | GCTGGTACATCTCAAGTTGC+TGG | + | chr3_4:80262886-80262905 | Msa0526410:intron | 50.0% |
TTACGCCCAGTACTGCATAG+GGG | - | chr3_4:80262995-80263014 | None:intergenic | 50.0% | |
GTTACGCCCAGTACTGCATA+GGG | - | chr3_4:80262996-80263015 | None:intergenic | 50.0% | |
TGTTACGCCCAGTACTGCAT+AGG | - | chr3_4:80262997-80263016 | None:intergenic | 50.0% | |
! | TGCAGTACTGGGCGTAACAA+AGG | + | chr3_4:80262998-80263017 | Msa0526410:intron | 50.0% |
! | TCGGCTTGCTCTTGATCTGT+TGG | - | chr3_4:80263024-80263043 | None:intergenic | 50.0% |
ATTATACAGACGCCACCGCA+TGG | - | chr3_4:80263123-80263142 | None:intergenic | 50.0% | |
AACATCAACCCTGTGTGGTG+AGG | - | chr3_4:80263277-80263296 | None:intergenic | 50.0% | |
ACCGCATTCGCTGTATGCTG+CGG | + | chr3_4:80255491-80255510 | Msa0526410:CDS | 55.0% | |
ACCGCAGCATACAGCGAATG+CGG | - | chr3_4:80255495-80255514 | None:intergenic | 55.0% | |
CTGTATGCTGCGGTTTCGGT+TGG | + | chr3_4:80255501-80255520 | Msa0526410:CDS | 55.0% | |
GCGAGCAAGGATCACTTCTG+AGG | + | chr3_4:80255811-80255830 | Msa0526410:CDS | 55.0% | |
GGTTGGGTGACCTGTTGGAT+AGG | + | chr3_4:80256013-80256032 | Msa0526410:intron | 55.0% | |
! | GGGGCTTTAGTTCCATCTCG+AGG | - | chr3_4:80258411-80258430 | None:intergenic | 55.0% |
TATGGCCGTGGTTGTGCTTG+GGG | - | chr3_4:80258430-80258449 | None:intergenic | 55.0% | |
GATATGGCCGTGGTTGTGCT+TGG | - | chr3_4:80258432-80258451 | None:intergenic | 55.0% | |
CCGGATCTTGCTCTACCTGA+AGG | - | chr3_4:80258850-80258869 | None:intergenic | 55.0% | |
GGCAACAAATGCCGTCTCTG+TGG | + | chr3_4:80258954-80258973 | Msa0526410:CDS | 55.0% | |
ATGCCGTCTCTGTGGATCAG+TGG | + | chr3_4:80258962-80258981 | Msa0526410:CDS | 55.0% | |
TGCCGTCTCTGTGGATCAGT+GGG | + | chr3_4:80258963-80258982 | Msa0526410:CDS | 55.0% | |
AGCCCACTGATCCACAGAGA+CGG | - | chr3_4:80258968-80258987 | None:intergenic | 55.0% | |
! | GAGAGATTCCGTGGTAACGC+TGG | + | chr3_4:80259054-80259073 | Msa0526410:CDS | 55.0% |
! | GGGATTGCTGCTTATGGACG+AGG | + | chr3_4:80259170-80259189 | Msa0526410:CDS | 55.0% |
CACTGCAAACTTGGGCTCAC+AGG | + | chr3_4:80259336-80259355 | Msa0526410:CDS | 55.0% | |
GAAGAGACAGGTGAAGCCTC+TGG | + | chr3_4:80259626-80259645 | Msa0526410:intron | 55.0% | |
TATCACCACGTGCCCTTTCG+TGG | - | chr3_4:80259992-80260011 | None:intergenic | 55.0% | |
! | CGTCAAGAAGCACAGCGTCT+GGG | + | chr3_4:80260647-80260666 | Msa0526410:CDS | 55.0% |
CAAGAGAGCCCACTGGCAAA+AGG | - | chr3_4:80260897-80260916 | None:intergenic | 55.0% | |
GAATCAGCAAGAGAGCCCAC+TGG | - | chr3_4:80260904-80260923 | None:intergenic | 55.0% | |
GGCAGGGAAAGCTTCAGGAT+AGG | + | chr3_4:80260941-80260960 | Msa0526410:intron | 55.0% | |
CTTCAGGATAGGATGGCTGG+TGG | + | chr3_4:80260952-80260971 | Msa0526410:CDS | 55.0% | |
TAGGATGGCTGGTGGCAAAG+AGG | + | chr3_4:80260960-80260979 | Msa0526410:CDS | 55.0% | |
!! | CTGGGTATCGGTCGACACAA+GGG | - | chr3_4:80261007-80261026 | None:intergenic | 55.0% |
CTGATGCGGCAGAGAGAGAA+AGG | + | chr3_4:80262152-80262171 | Msa0526410:intron | 55.0% | |
GATGCGGCAGAGAGAGAAAG+GGG | + | chr3_4:80262154-80262173 | Msa0526410:intron | 55.0% | |
TCTCTGTAGGAGCTCAGCTC+TGG | + | chr3_4:80262290-80262309 | Msa0526410:intron | 55.0% | |
CGGGATCCTTCATCAGATGG+AGG | - | chr3_4:80262561-80262580 | None:intergenic | 55.0% | |
CGAGGTCTGGGTTCACCTGT+AGG | - | chr3_4:80258393-80258412 | None:intergenic | 60.0% | |
GGTGAACCCAGACCTCGAGA+TGG | + | chr3_4:80258396-80258415 | Msa0526410:intron | 60.0% | |
AGGGACTTTCCGGCACCACA+AGG | - | chr3_4:80258886-80258905 | None:intergenic | 60.0% | |
! | GGTGCCGGAAAGTCCCTAGT+TGG | + | chr3_4:80258889-80258908 | Msa0526410:CDS | 60.0% |
! | GCGTCAAGAAGCACAGCGTC+TGG | + | chr3_4:80260646-80260665 | Msa0526410:CDS | 60.0% |
!! | CCTGGGTATCGGTCGACACA+AGG | - | chr3_4:80261008-80261027 | None:intergenic | 60.0% |
! | CCTTGTGTCGACCGATACCC+AGG | + | chr3_4:80261005-80261024 | Msa0526410:CDS | 60.0% |
TGAGACTGAGGGAGAGTGGG+AGG | + | chr3_4:80262216-80262235 | Msa0526410:intron | 60.0% | |
GAGACTGAGGGAGAGTGGGA+GGG | + | chr3_4:80262217-80262236 | Msa0526410:intron | 60.0% | |
AGACTGAGGGAGAGTGGGAG+GGG | + | chr3_4:80262218-80262237 | Msa0526410:intron | 60.0% | |
!! | GAGAGTGGGAGGGGGTATCT+TGG | + | chr3_4:80262227-80262246 | Msa0526410:intron | 60.0% |
ATCGGGACCACAGTTCGAGC+AGG | - | chr3_4:80262428-80262447 | None:intergenic | 60.0% | |
! | TGATAACGCCTGCCGTGTGC+TGG | + | chr3_4:80262868-80262887 | Msa0526410:intron | 60.0% |
GAGATGTACCAGCACACGGC+AGG | - | chr3_4:80262879-80262898 | None:intergenic | 60.0% | |
TCCTGGTGACCTCACCACAC+AGG | + | chr3_4:80263265-80263284 | Msa0526410:three_prime_UTR | 60.0% | |
CCTGGTGACCTCACCACACA+GGG | + | chr3_4:80263266-80263285 | Msa0526410:three_prime_UTR | 60.0% | |
GACTGAGGGAGAGTGGGAGG+GGG | + | chr3_4:80262219-80262238 | Msa0526410:intron | 65.0% | |
CCCTGTGTGGTGAGGTCACC+AGG | - | chr3_4:80263269-80263288 | None:intergenic | 65.0% | |
! | CCTGCAAACGGGCTCGGCGA+TGG | - | chr3_4:80255360-80255379 | None:intergenic | 70.0% |
CCATCGCCGAGCCCGTTTGC+AGG | + | chr3_4:80255357-80255376 | Msa0526410:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 80254748 | 80263481 | 80254748 | ID=Msa0526410;Name=Msa0526410 |
chr3_4 | mRNA | 80254748 | 80263481 | 80254748 | ID=Msa0526410-mRNA-1;Parent=Msa0526410;Name=Msa0526410-mRNA-1;_AED=0.15;_eAED=0.15;_QI=94|1|1|1|1|1|20|385|767 |
chr3_4 | exon | 80254748 | 80254851 | 80254748 | ID=Msa0526410-mRNA-1:exon:24089;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80254938 | 80254987 | 80254938 | ID=Msa0526410-mRNA-1:exon:24090;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80255067 | 80255139 | 80255067 | ID=Msa0526410-mRNA-1:exon:24091;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80255219 | 80255378 | 80255219 | ID=Msa0526410-mRNA-1:exon:24092;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80255461 | 80255683 | 80255461 | ID=Msa0526410-mRNA-1:exon:24093;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80255776 | 80255832 | 80255776 | ID=Msa0526410-mRNA-1:exon:24094;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80256320 | 80256460 | 80256320 | ID=Msa0526410-mRNA-1:exon:24095;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80257632 | 80257712 | 80257632 | ID=Msa0526410-mRNA-1:exon:24096;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80258397 | 80258484 | 80258397 | ID=Msa0526410-mRNA-1:exon:24097;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80258854 | 80259191 | 80258854 | ID=Msa0526410-mRNA-1:exon:24098;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80259282 | 80259357 | 80259282 | ID=Msa0526410-mRNA-1:exon:24099;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80259442 | 80259635 | 80259442 | ID=Msa0526410-mRNA-1:exon:24100;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80259933 | 80260096 | 80259933 | ID=Msa0526410-mRNA-1:exon:24101;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80260184 | 80260256 | 80260184 | ID=Msa0526410-mRNA-1:exon:24102;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80260575 | 80260688 | 80260575 | ID=Msa0526410-mRNA-1:exon:24103;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80260946 | 80261026 | 80260946 | ID=Msa0526410-mRNA-1:exon:24104;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80261167 | 80261226 | 80261167 | ID=Msa0526410-mRNA-1:exon:24105;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80262543 | 80262626 | 80262543 | ID=Msa0526410-mRNA-1:exon:24106;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80262698 | 80262840 | 80262698 | ID=Msa0526410-mRNA-1:exon:24107;Parent=Msa0526410-mRNA-1 |
chr3_4 | exon | 80263003 | 80263481 | 80263003 | ID=Msa0526410-mRNA-1:exon:24108;Parent=Msa0526410-mRNA-1 |
chr3_4 | five_prime_UTR | 80254748 | 80254841 | 80254748 | ID=Msa0526410-mRNA-1:five_prime_utr;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80254842 | 80254851 | 80254842 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80254938 | 80254987 | 80254938 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80255067 | 80255139 | 80255067 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80255219 | 80255378 | 80255219 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80255461 | 80255683 | 80255461 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80255776 | 80255832 | 80255776 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80256320 | 80256460 | 80256320 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80257632 | 80257712 | 80257632 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80258397 | 80258484 | 80258397 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80258854 | 80259191 | 80258854 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80259282 | 80259357 | 80259282 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80259442 | 80259635 | 80259442 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80259933 | 80260096 | 80259933 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80260184 | 80260256 | 80260184 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80260575 | 80260688 | 80260575 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80260946 | 80261026 | 80260946 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80261167 | 80261226 | 80261167 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80262543 | 80262626 | 80262543 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80262698 | 80262840 | 80262698 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | CDS | 80263003 | 80263096 | 80263003 | ID=Msa0526410-mRNA-1:cds;Parent=Msa0526410-mRNA-1 |
chr3_4 | three_prime_UTR | 80263097 | 80263481 | 80263097 | ID=Msa0526410-mRNA-1:three_prime_utr;Parent=Msa0526410-mRNA-1 |
Gene Sequence |
Protein sequence |