Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080310 | AET04676.2 | 43.085 | 188 | 61 | 7 | 6 | 168 | 17 | 183 | 8.55e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080310 | G7LD37 | 43.085 | 188 | 61 | 7 | 6 | 168 | 17 | 183 | 4.09e-27 | 110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047280 | Msa1080310 | 0.838397 | 2.946266e-57 | -8.615850e-47 |
| Msa0616240 | Msa1080310 | 0.802674 | 5.014639e-49 | -8.615850e-47 |
| Msa0699570 | Msa1080310 | 0.805772 | 1.135855e-49 | -8.615850e-47 |
| Msa0807370 | Msa1080310 | 0.801360 | 9.342727e-49 | -8.615850e-47 |
| Msa0139990 | Msa1080310 | 0.830987 | 2.154995e-55 | -8.615850e-47 |
| Msa0207350 | Msa1080310 | 0.811313 | 7.452603e-51 | -8.615850e-47 |
| Msa0431770 | Msa1080310 | 0.801456 | 8.925858e-49 | -8.615850e-47 |
| Msa1000930 | Msa1080310 | 0.806533 | 7.856755e-50 | -8.615850e-47 |
| Msa1071530 | Msa1080310 | 0.821358 | 4.212220e-53 | -8.615850e-47 |
| Msa1080310 | Msa1253810 | 0.832686 | 8.206565e-56 | -8.615850e-47 |
| Msa1080310 | Msa1306760 | 0.818936 | 1.510790e-52 | -8.615850e-47 |
| Msa1080310 | Msa1323990 | 0.827500 | 1.512025e-54 | -8.615850e-47 |
| Msa1080310 | Msa1450180 | 0.803626 | 3.187376e-49 | -8.615850e-47 |
| Msa1080310 | Msa1454450 | 0.807746 | 4.347434e-50 | -8.615850e-47 |
| Msa1080310 | Msa1461490 | 0.818387 | 2.012883e-52 | -8.615850e-47 |
| Msa0245310 | Msa1080310 | 0.803536 | 3.326953e-49 | -8.615850e-47 |
| Msa0888990 | Msa1080310 | 0.802614 | 5.160460e-49 | -8.615850e-47 |
| Msa0944610 | Msa1080310 | 0.808716 | 2.701142e-50 | -8.615850e-47 |
| Msa0949590 | Msa1080310 | 0.803888 | 2.812211e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080310 | MtrunA17_Chr3g0124821 | 77.778 | 45 | 7 | 1 | 44 | 85 | 77 | 121 | 2.39e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 102 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGAGGCTCTCGGGTTTC+AGG | 0.140533 | 7_2:+79744219 | None:intergenic |
| CTTATATAGTCTTCAATAAA+AGG | 0.178307 | 7_2:+79748322 | None:intergenic |
| GATTGAATTGCAGGGTAATT+TGG | 0.204017 | 7_2:-79745673 | Msa1080310:intron |
| CTGCATCTAAGCCTGTTAAT+TGG | 0.209883 | 7_2:+79744378 | None:intergenic |
| TTTGAGAAGGTCTTCTATTT+TGG | 0.212238 | 7_2:-79744181 | Msa1080310:three_prime_UTR |
| CCCCTTCCACCAGCTTCTTA+TGG | 0.212581 | 7_2:+79748014 | None:intergenic |
| CCTTACACGGGGACCAAGTA+TGG | 0.234472 | 7_2:+79745834 | None:intergenic |
| GGAACATTGTTTATCAATTT+AGG | 0.249469 | 7_2:-79744105 | Msa1080310:three_prime_UTR |
| TTTAAATAGGTATGCGATTT+CGG | 0.262568 | 7_2:+79743867 | None:intergenic |
| GCATCTTCATGGGAACAATT+TGG | 0.278027 | 7_2:-79744419 | Msa1080310:three_prime_UTR |
| TATTTCAGGGTGGGCTTTGA+TGG | 0.281036 | 7_2:-79745880 | Msa1080310:intron |
| ATTCGACATGTTCATGTATA+TGG | 0.306244 | 7_2:+79743828 | None:intergenic |
| AATAGAGATATCAATGTAAT+GGG | 0.323944 | 7_2:+79748350 | None:intergenic |
| GCAAATGTAGCCCAATTAAC+AGG | 0.347740 | 7_2:-79744389 | Msa1080310:three_prime_UTR |
| GAAGATATCAAGGAGCTTCT+TGG | 0.348839 | 7_2:-79747524 | Msa1080310:CDS |
| TTCCTCAATTGAAGAGCCTT+TGG | 0.359538 | 7_2:+79745992 | None:intergenic |
| TTAGATGCAGTTAAGTTGAT+TGG | 0.363791 | 7_2:-79744365 | Msa1080310:three_prime_UTR |
| TCTAACAATGGAATAGATCT+TGG | 0.363902 | 7_2:+79748057 | None:intergenic |
| CTAGTTGTTCTAGAGGCTCT+CGG | 0.379192 | 7_2:+79744211 | None:intergenic |
| TGAAGAGCCTTTGGAATGTC+AGG | 0.386227 | 7_2:+79746001 | None:intergenic |
| TGCATCTAAGCCTGTTAATT+GGG | 0.401751 | 7_2:+79744379 | None:intergenic |
| GCACTGAAAATTACCATAAG+AGG | 0.403781 | 7_2:+79747485 | None:intergenic |
| GATATAGAATGGCATCTTCA+TGG | 0.405406 | 7_2:-79744430 | Msa1080310:three_prime_UTR |
| TCCAGGACTGTTCCCATACT+TGG | 0.415477 | 7_2:-79745847 | Msa1080310:CDS |
| AAGATATCAAGGAGCTTCTT+GGG | 0.420264 | 7_2:-79747523 | Msa1080310:CDS |
| TTGAAAACTCAAGATCTTGA+AGG | 0.429876 | 7_2:-79745093 | Msa1080310:three_prime_UTR |
| TAGATGCAGTTAAGTTGATT+GGG | 0.430986 | 7_2:-79744364 | Msa1080310:three_prime_UTR |
| TTATATAGTCTTCAATAAAA+GGG | 0.431046 | 7_2:+79748323 | None:intergenic |
| CTATCTTTATTTGCTCGCCA+TGG | 0.432400 | 7_2:-79744136 | Msa1080310:three_prime_UTR |
| CTAGAGGCTCTCGGGTTTCA+GGG | 0.434211 | 7_2:+79744220 | None:intergenic |
| TATACATGAACATGTCGAAT+AGG | 0.437283 | 7_2:-79743825 | Msa1080310:three_prime_UTR |
| CCATACTTGGTCCCCGTGTA+AGG | 0.442603 | 7_2:-79745834 | Msa1080310:CDS |
| TGCACAACATTTAAGTTGAT+CGG | 0.443825 | 7_2:-79744285 | Msa1080310:three_prime_UTR |
| CCTTACTCATAGAACATACA+TGG | 0.451937 | 7_2:+79743917 | None:intergenic |
| AAATAGAGATATCAATGTAA+TGG | 0.455403 | 7_2:+79748349 | None:intergenic |
| AATTGCAGGGTAATTTGGAA+TGG | 0.457236 | 7_2:-79745668 | Msa1080310:intron |
| AGGCTCAAAATGAAATTGAT+TGG | 0.457700 | 7_2:-79744081 | Msa1080310:three_prime_UTR |
| ACTATATAAGGATGTGTTTG+TGG | 0.458480 | 7_2:-79748309 | Msa1080310:exon |
| GATGGTGCTTATAGATGAAA+AGG | 0.458957 | 7_2:-79747981 | Msa1080310:intron |
| GCACAACATTTAAGTTGATC+GGG | 0.461531 | 7_2:-79744284 | Msa1080310:three_prime_UTR |
| TTCCAAAGGCTCTTCAATTG+AGG | 0.463441 | 7_2:-79745994 | Msa1080310:CDS |
| ACCAAGTATGGGAACAGTCC+TGG | 0.464482 | 7_2:+79745846 | None:intergenic |
| CCATGTATGTTCTATGAGTA+AGG | 0.467499 | 7_2:-79743917 | Msa1080310:three_prime_UTR |
| TTTATTTGCTCGCCATGGGA+TGG | 0.467762 | 7_2:-79744131 | Msa1080310:three_prime_UTR |
| ACAATAAAAGTTTCGTCGCC+AGG | 0.472468 | 7_2:+79745745 | None:intergenic |
| AAGTGATTGTGTACAACTAA+AGG | 0.473805 | 7_2:-79745644 | Msa1080310:exon |
| TTATTTGCTCGCCATGGGAT+GGG | 0.475809 | 7_2:-79744130 | Msa1080310:three_prime_UTR |
| CCATAAGAAGCTGGTGGAAG+GGG | 0.479621 | 7_2:-79748014 | Msa1080310:CDS |
| TATCTTTATTTGCTCGCCAT+GGG | 0.490561 | 7_2:-79744135 | Msa1080310:three_prime_UTR |
| CATCAAAAGACGACCTTACA+CGG | 0.492369 | 7_2:+79745821 | None:intergenic |
| TAGAGGTTCCACCTTCTGCT+TGG | 0.493011 | 7_2:-79743675 | Msa1080310:three_prime_UTR |
| TAGTTGTTCTAGAGGCTCTC+GGG | 0.496041 | 7_2:+79744212 | None:intergenic |
| AGTGATTGTGTACAACTAAA+GGG | 0.502805 | 7_2:-79745643 | Msa1080310:exon |
| ATTGCAGGGTAATTTGGAAT+GGG | 0.505588 | 7_2:-79745667 | Msa1080310:intron |
| TTGATGGAGTTGAGACATCC+AGG | 0.509692 | 7_2:-79745864 | Msa1080310:CDS |
| GGATGTGTTTGTGGTTCGAT+TGG | 0.515798 | 7_2:-79748300 | Msa1080310:CDS |
| GTGGTTCGATTGGAGCAGCC+AGG | 0.523699 | 7_2:-79748290 | Msa1080310:intron |
| ATATAGAATGGCATCTTCAT+GGG | 0.528555 | 7_2:-79744429 | Msa1080310:three_prime_UTR |
| TGAAAACTCAAGATCTTGAA+GGG | 0.530000 | 7_2:-79745092 | Msa1080310:three_prime_UTR |
| TGTGTACAACTAAAGGGAGA+TGG | 0.530090 | 7_2:-79745637 | Msa1080310:exon |
| TGAGAAAATCTACACCATGC+AGG | 0.530337 | 7_2:-79745050 | Msa1080310:three_prime_UTR |
| AAGTGCTGTAGAAGATATCA+AGG | 0.532036 | 7_2:-79747534 | Msa1080310:CDS |
| TTCCATAAGAAGCTGGTGGA+AGG | 0.532716 | 7_2:-79748016 | Msa1080310:CDS |
| GAGAAAATCTACACCATGCA+GGG | 0.532753 | 7_2:-79745049 | Msa1080310:three_prime_UTR |
| TTGCTCGCCATGGGATGGGA+TGG | 0.534839 | 7_2:-79744126 | Msa1080310:three_prime_UTR |
| TTCTAAGTAATAATATATAG+AGG | 0.541487 | 7_2:-79743692 | Msa1080310:three_prime_UTR |
| TCCATAAGAAGCTGGTGGAA+GGG | 0.547551 | 7_2:-79748015 | Msa1080310:CDS |
| GGTCAATAGTTGTTAAGTGT+CGG | 0.554449 | 7_2:-79744060 | Msa1080310:three_prime_UTR |
| GTGTACAACTAAAGGGAGAT+GGG | 0.554489 | 7_2:-79745636 | Msa1080310:exon |
| CTATAATTCTCTGATGCTGT+TGG | 0.556509 | 7_2:-79748448 | None:intergenic |
| AAAGGGAGATGGGAGTATTG+TGG | 0.556822 | 7_2:-79745626 | Msa1080310:three_prime_UTR |
| GCATCTTCTAGTTGTTCTAG+AGG | 0.556880 | 7_2:+79744204 | None:intergenic |
| AATGCTATTTGTACAACCAT+AGG | 0.565364 | 7_2:-79745001 | Msa1080310:intron |
| CATGCAGGGGATGATTTCAA+AGG | 0.566337 | 7_2:-79745035 | Msa1080310:three_prime_UTR |
| CATTGTTTATCAATTTAGGA+AGG | 0.567874 | 7_2:-79744101 | Msa1080310:three_prime_UTR |
| TCGCAGAGAATGTCGAAGCT+AGG | 0.573476 | 7_2:-79748377 | Msa1080310:five_prime_UTR |
| TATGGTTGTACAAATAGCAT+TGG | 0.575019 | 7_2:+79745003 | None:intergenic |
| ATCAAAAGACGACCTTACAC+GGG | 0.577940 | 7_2:+79745822 | None:intergenic |
| CTGTTGGTCGATGTTCTGAC+AGG | 0.585006 | 7_2:-79748432 | Msa1080310:five_prime_UTR |
| TGTGGTAGTATGAATTGTTG+AGG | 0.587055 | 7_2:-79745608 | Msa1080310:intron |
| TAATGTTTCTTAATAGCACA+TGG | 0.587149 | 7_2:+79743794 | None:intergenic |
| CTTACACGGGGACCAAGTAT+GGG | 0.587588 | 7_2:+79745835 | None:intergenic |
| TAAGAAGCTGGTGGAAGGGG+AGG | 0.594649 | 7_2:-79748011 | Msa1080310:CDS |
| GCTCAGCTGATTGATATACC+TGG | 0.595647 | 7_2:-79745763 | Msa1080310:CDS |
| TATATAGTCTTCAATAAAAG+GGG | 0.596171 | 7_2:+79748324 | None:intergenic |
| CTTTGAAATCATCCCCTGCA+TGG | 0.596189 | 7_2:+79745036 | None:intergenic |
| CTGTGTGAGCTGATATAGAA+TGG | 0.602735 | 7_2:-79744441 | Msa1080310:three_prime_UTR |
| TCAAGTTCAATCCAAGCAGA+AGG | 0.609488 | 7_2:+79743664 | None:intergenic |
| AGTTCAATCCAAGCAGAAGG+TGG | 0.610778 | 7_2:+79743667 | None:intergenic |
| TATATCAATCAGCTGAGCAA+TGG | 0.612837 | 7_2:+79745768 | None:intergenic |
| AACTAGAAGATGCTTTGAGA+AGG | 0.613004 | 7_2:-79744194 | Msa1080310:three_prime_UTR |
| GATCAATCCTGACATTCCAA+AGG | 0.622664 | 7_2:-79746008 | Msa1080310:CDS |
| CAATGTTCCATCCCATCCCA+TGG | 0.628070 | 7_2:+79744119 | None:intergenic |
| GGAAGGGGAGGTGTACAAGA+TGG | 0.628472 | 7_2:-79747999 | Msa1080310:CDS |
| TATATGAACATTCAATCATG+AGG | 0.628755 | 7_2:-79743992 | Msa1080310:three_prime_UTR |
| TTTGAGTGGACGATTCGGAA+CGG | 0.632417 | 7_2:-79747588 | Msa1080310:CDS |
| ATAGAGATATCAATGTAATG+GGG | 0.646598 | 7_2:+79748351 | None:intergenic |
| CTTACTCATAGAACATACAT+GGG | 0.660060 | 7_2:+79743918 | None:intergenic |
| TGAAAGCAGCAAATACAACA+AGG | 0.683813 | 7_2:-79744334 | Msa1080310:three_prime_UTR |
| AGAAAATCTACACCATGCAG+GGG | 0.690726 | 7_2:-79745048 | Msa1080310:three_prime_UTR |
| TGTTTCTTAATAGCACATGG+TGG | 0.698314 | 7_2:+79743797 | None:intergenic |
| TCAAAAGACGACCTTACACG+GGG | 0.716939 | 7_2:+79745823 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTGAATAATTTTTATTT+AGG | - | chr7_2:79745467-79745486 | Msa1080310:intron | 10.0% |
| !! | TTGATTTAATTAGAAAAATT+AGG | + | chr7_2:79747615-79747634 | None:intergenic | 10.0% |
| !! | TTATATAGTCTTCAATAAAA+GGG | + | chr7_2:79743786-79743805 | None:intergenic | 15.0% |
| !! | TGGATGAAAATAAAAAATAA+AGG | + | chr7_2:79744378-79744397 | None:intergenic | 15.0% |
| !! | TAGAAAATCAATGATATAAA+TGG | + | chr7_2:79744920-79744939 | None:intergenic | 15.0% |
| !!! | TTTTGTATCTTACATTTTTT+CGG | - | chr7_2:79744960-79744979 | Msa1080310:intron | 15.0% |
| !! | TACTAACCAAATAAAAATAA+AGG | + | chr7_2:79745391-79745410 | None:intergenic | 15.0% |
| !!! | TTGTTTAAGTCATTTTTTAA+AGG | - | chr7_2:79745596-79745615 | Msa1080310:intron | 15.0% |
| !! | ATTGTATATCTATATAACTT+TGG | - | chr7_2:79746151-79746170 | Msa1080310:intron | 15.0% |
| !! | TATAACTTAACAAATCAAAA+TGG | - | chr7_2:79747164-79747183 | Msa1080310:intron | 15.0% |
| !! | TTCTAAGTAATAATATATAG+AGG | - | chr7_2:79748414-79748433 | Msa1080310:five_prime_UTR | 15.0% |
| !! | AATAGAGATATCAATGTAAT+GGG | + | chr7_2:79743759-79743778 | None:intergenic | 20.0% |
| !! | AAATAGAGATATCAATGTAA+TGG | + | chr7_2:79743760-79743779 | None:intergenic | 20.0% |
| !! | TATATAGTCTTCAATAAAAG+GGG | + | chr7_2:79743785-79743804 | None:intergenic | 20.0% |
| !! | CTTATATAGTCTTCAATAAA+AGG | + | chr7_2:79743787-79743806 | None:intergenic | 20.0% |
| !!! | CTTTTATTGAAGACTATATA+AGG | - | chr7_2:79743785-79743804 | Msa1080310:three_prime_UTR | 20.0% |
| !! | AAATGATAATCAGAGAAAAT+AGG | + | chr7_2:79744005-79744024 | None:intergenic | 20.0% |
| !! | TCTGATTATCATTTATTTGT+GGG | - | chr7_2:79744011-79744030 | Msa1080310:three_prime_UTR | 20.0% |
| !!! | TTTCTTCCATCTTTATTTTT+TGG | - | chr7_2:79744177-79744196 | Msa1080310:three_prime_UTR | 20.0% |
| !!! | TTCTTCCATCTTTATTTTTT+GGG | - | chr7_2:79744178-79744197 | Msa1080310:three_prime_UTR | 20.0% |
| !!! | TAAAAAAAATGGCATTGAAA+TGG | + | chr7_2:79744452-79744471 | None:intergenic | 20.0% |
| !! | CACAAACGAATTAAAAAAAA+TGG | + | chr7_2:79744463-79744482 | None:intergenic | 20.0% |
| !!! | AATAAACACTCTTTTTTGTT+AGG | - | chr7_2:79744786-79744805 | Msa1080310:intron | 20.0% |
| !!! | TTACATTTTTTCGGTTTTTT+AGG | - | chr7_2:79744969-79744988 | Msa1080310:intron | 20.0% |
| !!! | CTGAATCCTTTATTTTTATT+TGG | - | chr7_2:79745382-79745401 | Msa1080310:intron | 20.0% |
| !!! | GAATAATTTTTATTTAGGTG+AGG | - | chr7_2:79745472-79745491 | Msa1080310:intron | 20.0% |
| !! | TTATAGCTACATATGAAAAA+TGG | - | chr7_2:79745513-79745532 | Msa1080310:intron | 20.0% |
| !! | TGACTTAAACAAATAATAAG+AGG | + | chr7_2:79745588-79745607 | None:intergenic | 20.0% |
| !! | TTTCTTGTGTTAAACAAAAT+TGG | + | chr7_2:79745696-79745715 | None:intergenic | 20.0% |
| !! | TTACTATAAATATTTGCATC+TGG | - | chr7_2:79745959-79745978 | Msa1080310:intron | 20.0% |
| !! | TACTATAAATATTTGCATCT+GGG | - | chr7_2:79745960-79745979 | Msa1080310:intron | 20.0% |
| !! | TAACAAAAGTAATATTTGTG+AGG | + | chr7_2:79746009-79746028 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTTCTTCCTATTT+TGG | - | chr7_2:79746603-79746622 | Msa1080310:intron | 20.0% |
| !! | CAACATAAAAATACCAAAAT+AGG | + | chr7_2:79746619-79746638 | None:intergenic | 20.0% |
| !! | AAAAGTAAAAGAGAAAGAAA+AGG | + | chr7_2:79746766-79746785 | None:intergenic | 20.0% |
| !! | TTCAGAATTCATATTAATCA+AGG | + | chr7_2:79746805-79746824 | None:intergenic | 20.0% |
| !!! | GAAGAAAAAAACAGTTTTTT+AGG | + | chr7_2:79747299-79747318 | None:intergenic | 20.0% |
| !! | TTCTATTCTTCTTTACTTAT+TGG | - | chr7_2:79747316-79747335 | Msa1080310:intron | 20.0% |
| !! | ACTATCAAAAAAGCTAAAAA+TGG | + | chr7_2:79747502-79747521 | None:intergenic | 20.0% |
| !!! | ATTTTGGAAATATAGAATCT+TGG | - | chr7_2:79747573-79747592 | Msa1080310:CDS | 20.0% |
| !!! | GATTGAAAATGTAATTTTGA+AGG | - | chr7_2:79747636-79747655 | Msa1080310:intron | 20.0% |
| !!! | GACTTTTTTCACTTTTAAAT+AGG | + | chr7_2:79748255-79748274 | None:intergenic | 20.0% |
| ! | ATAGAGATATCAATGTAATG+GGG | + | chr7_2:79743758-79743777 | None:intergenic | 25.0% |
| ! | CTCTGATTATCATTTATTTG+TGG | - | chr7_2:79744010-79744029 | Msa1080310:three_prime_UTR | 25.0% |
| ! | AAGAACCCAAAAAATAAAGA+TGG | + | chr7_2:79744186-79744205 | None:intergenic | 25.0% |
| !! | ATGGCATTTTATCAAACATA+TGG | + | chr7_2:79744302-79744321 | None:intergenic | 25.0% |
| !!! | ATTTTGATCAGAATTCACTA+TGG | + | chr7_2:79744321-79744340 | None:intergenic | 25.0% |
| ! | AGAAGAAAACATCAAACATA+TGG | + | chr7_2:79744352-79744371 | None:intergenic | 25.0% |
| ! | TACAACATTACTCAAATATG+TGG | + | chr7_2:79744398-79744417 | None:intergenic | 25.0% |
| ! | AAGGGGAAAATAGTAATAAT+AGG | + | chr7_2:79744873-79744892 | None:intergenic | 25.0% |
| !! | TGCAAATTTTTCATTTCACT+AGG | - | chr7_2:79745311-79745330 | Msa1080310:intron | 25.0% |
| !! | TATTCAACTTGAATGCTTTT+AGG | + | chr7_2:79745457-79745476 | None:intergenic | 25.0% |
| ! | ATAATTTATGCAATTCGAGA+AGG | - | chr7_2:79745539-79745558 | Msa1080310:intron | 25.0% |
| ! | ACAAATAATAAGAGGTTCTA+CGG | + | chr7_2:79745580-79745599 | None:intergenic | 25.0% |
| ! | TGTTTCAACAGTTAACAATT+TGG | + | chr7_2:79745801-79745820 | None:intergenic | 25.0% |
| ! | TTTCACTCAATTGTTTAACT+TGG | - | chr7_2:79745840-79745859 | Msa1080310:CDS | 25.0% |
| !!! | AGATTCAGTTGAGTTTTTTT+TGG | - | chr7_2:79746571-79746590 | Msa1080310:intron | 25.0% |
| ! | ATTAGATACTTAGATATTGC+AGG | + | chr7_2:79746662-79746681 | None:intergenic | 25.0% |
| !!! | TAACACTTTTAAGATTCACT+TGG | - | chr7_2:79746913-79746932 | Msa1080310:intron | 25.0% |
| ! | AAATTTCAACTCTTCAGTTA+TGG | - | chr7_2:79747192-79747211 | Msa1080310:intron | 25.0% |
| !!! | TTAGCTTTTTTGATAGTAGA+TGG | - | chr7_2:79747505-79747524 | Msa1080310:CDS | 25.0% |
| !! | TTGATAGTAGATGGATAAAT+TGG | - | chr7_2:79747514-79747533 | Msa1080310:CDS | 25.0% |
| !!! | GAAAATGTAATTTTGAAGGT+TGG | - | chr7_2:79747640-79747659 | Msa1080310:intron | 25.0% |
| !!! | TATTTTGGTCAATAGTTGTT+AGG | - | chr7_2:79747940-79747959 | Msa1080310:intron | 25.0% |
| ! | GGAACATTGTTTATCAATTT+AGG | - | chr7_2:79748001-79748020 | Msa1080310:CDS | 25.0% |
| ! | CATTGTTTATCAATTTAGGA+AGG | - | chr7_2:79748005-79748024 | Msa1080310:CDS | 25.0% |
| ! | TATATGAACATTCAATCATG+AGG | - | chr7_2:79748114-79748133 | Msa1080310:intron | 25.0% |
| ! | TTTAAATAGGTATGCGATTT+CGG | + | chr7_2:79748242-79748261 | None:intergenic | 25.0% |
| ! | TAATGTTTCTTAATAGCACA+TGG | + | chr7_2:79748315-79748334 | None:intergenic | 25.0% |
| ! | TTTAACGTAAAAAAAGCAGA+AGG | + | chr7_2:79748368-79748387 | None:intergenic | 25.0% |
| !!! | ACTTTTGTCATCGTTTTTTT+AGG | - | chr7_2:79748388-79748407 | Msa1080310:five_prime_UTR | 25.0% |
| !!! | TCAAATTTTTTGTCAGCTTG+TGG | - | chr7_2:79743701-79743720 | Msa1080310:three_prime_UTR | 30.0% |
| ACTATATAAGGATGTGTTTG+TGG | - | chr7_2:79743797-79743816 | Msa1080310:three_prime_UTR | 30.0% | |
| TAGATCAGAAAATTGATACC+TGG | + | chr7_2:79743837-79743856 | None:intergenic | 30.0% | |
| ! | TGTTGTGTTCTTCAATTTTC+TGG | - | chr7_2:79743941-79743960 | Msa1080310:three_prime_UTR | 30.0% |
| TTGATGTTTCAGTTGTGTAA+TGG | - | chr7_2:79743965-79743984 | Msa1080310:three_prime_UTR | 30.0% | |
| TCTAACAATGGAATAGATCT+TGG | + | chr7_2:79744052-79744071 | None:intergenic | 30.0% | |
| !! | TATCAGCTGTTTTCTAACAA+TGG | + | chr7_2:79744064-79744083 | None:intergenic | 30.0% |
| AATTGATCATGTTGAAAGTG+TGG | - | chr7_2:79744417-79744436 | Msa1080310:three_prime_UTR | 30.0% | |
| !!! | ACTCTTTTTTGTTAGGTCAT+AGG | - | chr7_2:79744793-79744812 | Msa1080310:intron | 30.0% |
| AAAGCTCATAATGCATTCAA+GGG | + | chr7_2:79744891-79744910 | None:intergenic | 30.0% | |
| ! | CCATTAGTATGCTTCTAAAA+TGG | + | chr7_2:79745027-79745046 | None:intergenic | 30.0% |
| !! | CCATTTTAGAAGCATACTAA+TGG | - | chr7_2:79745024-79745043 | Msa1080310:three_prime_UTR | 30.0% |
| !! | AAGTGTTGATCTTCTTACAA+TGG | - | chr7_2:79745343-79745362 | Msa1080310:intron | 30.0% |
| CCTATCATATGTAAAGTTTG+AGG | + | chr7_2:79745424-79745443 | None:intergenic | 30.0% | |
| CCTCAAACTTTACATATGAT+AGG | - | chr7_2:79745421-79745440 | Msa1080310:intron | 30.0% | |
| CAAACTTTACATATGATAGG+TGG | - | chr7_2:79745424-79745443 | Msa1080310:intron | 30.0% | |
| AAACACCAATTTAGTGAGTT+TGG | - | chr7_2:79745816-79745835 | Msa1080310:CDS | 30.0% | |
| GAAAACCAAACTCACTAAAT+TGG | + | chr7_2:79745824-79745843 | None:intergenic | 30.0% | |
| ATAAATATTTGCATCTGGGA+TGG | - | chr7_2:79745964-79745983 | Msa1080310:intron | 30.0% | |
| TTATGAATATGACTGTGGTT+GGG | - | chr7_2:79746405-79746424 | Msa1080310:intron | 30.0% | |
| AAGTGATTGTGTACAACTAA+AGG | - | chr7_2:79746462-79746481 | Msa1080310:intron | 30.0% | |
| AGTGATTGTGTACAACTAAA+GGG | - | chr7_2:79746463-79746482 | Msa1080310:intron | 30.0% | |
| TCGGTTAAGAAATTTATGCA+TGG | + | chr7_2:79746728-79746747 | None:intergenic | 30.0% | |
| TTGAAAACTCAAGATCTTGA+AGG | - | chr7_2:79747013-79747032 | Msa1080310:intron | 30.0% | |
| TGAAAACTCAAGATCTTGAA+GGG | - | chr7_2:79747014-79747033 | Msa1080310:intron | 30.0% | |
| TATGGTTGTACAAATAGCAT+TGG | + | chr7_2:79747106-79747125 | None:intergenic | 30.0% | |
| ! | AATGCTATTTGTACAACCAT+AGG | - | chr7_2:79747105-79747124 | Msa1080310:intron | 30.0% |
| CACGATCATTTATTTACCTA+TGG | + | chr7_2:79747124-79747143 | None:intergenic | 30.0% | |
| TTCTTCTTTACTTATTGGAC+CGG | - | chr7_2:79747321-79747340 | Msa1080310:intron | 30.0% | |
| ACATGAAATGTTGATCAACA+AGG | - | chr7_2:79747445-79747464 | Msa1080310:intron | 30.0% | |
| CATGAAATGTTGATCAACAA+GGG | - | chr7_2:79747446-79747465 | Msa1080310:intron | 30.0% | |
| ATGAAATGTTGATCAACAAG+GGG | - | chr7_2:79747447-79747466 | Msa1080310:intron | 30.0% | |
| TTTCCAAAATATTTGCACTG+TGG | + | chr7_2:79747563-79747582 | None:intergenic | 30.0% | |
| ATATAGAATGGCATCTTCAT+GGG | - | chr7_2:79747677-79747696 | Msa1080310:intron | 30.0% | |
| !! | TTAGATGCAGTTAAGTTGAT+TGG | - | chr7_2:79747741-79747760 | Msa1080310:intron | 30.0% |
| !! | TAGATGCAGTTAAGTTGATT+GGG | - | chr7_2:79747742-79747761 | Msa1080310:intron | 30.0% |
| !! | TGCACAACATTTAAGTTGAT+CGG | - | chr7_2:79747821-79747840 | Msa1080310:intron | 30.0% |
| ! | TTTGAGAAGGTCTTCTATTT+TGG | - | chr7_2:79747925-79747944 | Msa1080310:intron | 30.0% |
| AGGCTCAAAATGAAATTGAT+TGG | - | chr7_2:79748025-79748044 | Msa1080310:CDS | 30.0% | |
| CTTACTCATAGAACATACAT+GGG | + | chr7_2:79748191-79748210 | None:intergenic | 30.0% | |
| ATTCGACATGTTCATGTATA+TGG | + | chr7_2:79748281-79748300 | None:intergenic | 30.0% | |
| TATACATGAACATGTCGAAT+AGG | - | chr7_2:79748281-79748300 | Msa1080310:intron | 30.0% | |
| ACAAACGAAGCAATCTTATG+TGG | + | chr7_2:79743863-79743882 | None:intergenic | 35.0% | |
| TTGTGTTCTTCGATTGAGTT+TGG | - | chr7_2:79743886-79743905 | Msa1080310:three_prime_UTR | 35.0% | |
| TGTGTTCTTCGATTGAGTTT+GGG | - | chr7_2:79743887-79743906 | Msa1080310:three_prime_UTR | 35.0% | |
| ! | TTATTTGTGGGTGTTGTGTT+AGG | - | chr7_2:79744023-79744042 | Msa1080310:three_prime_UTR | 35.0% |
| ! | TATTTGTGGGTGTTGTGTTA+GGG | - | chr7_2:79744024-79744043 | Msa1080310:three_prime_UTR | 35.0% |
| ! | ATACGTTTTCCATAAGAAGC+TGG | - | chr7_2:79744083-79744102 | Msa1080310:three_prime_UTR | 35.0% |
| GATGGTGCTTATAGATGAAA+AGG | - | chr7_2:79744125-79744144 | Msa1080310:three_prime_UTR | 35.0% | |
| AGATGGAAGAAACGAAACAT+TGG | + | chr7_2:79744169-79744188 | None:intergenic | 35.0% | |
| TTCAAAGTCACACACAACAA+AGG | + | chr7_2:79744241-79744260 | None:intergenic | 35.0% | |
| !!! | TTTGCCATTTTTTAGCGAAG+AGG | - | chr7_2:79744492-79744511 | Msa1080310:intron | 35.0% |
| AACACCTCTTCGCTAAAAAA+TGG | + | chr7_2:79744499-79744518 | None:intergenic | 35.0% | |
| ! | AAGTGCTGTAGAAGATATCA+AGG | - | chr7_2:79744572-79744591 | Msa1080310:intron | 35.0% |
| AAGATATCAAGGAGCTTCTT+GGG | - | chr7_2:79744583-79744602 | Msa1080310:intron | 35.0% | |
| !! | TAAGTTTTGTCGTCCTCTTA+TGG | - | chr7_2:79744608-79744627 | Msa1080310:intron | 35.0% |
| GCACTGAAAATTACCATAAG+AGG | + | chr7_2:79744624-79744643 | None:intergenic | 35.0% | |
| ! | GATTTAGCGTTTTCTTTGTC+TGG | - | chr7_2:79744696-79744715 | Msa1080310:intron | 35.0% |
| AAGCTCATAATGCATTCAAG+GGG | + | chr7_2:79744890-79744909 | None:intergenic | 35.0% | |
| GAAAGCTCATAATGCATTCA+AGG | + | chr7_2:79744892-79744911 | None:intergenic | 35.0% | |
| CATGTTTGTGAAATTGTCTC+AGG | - | chr7_2:79745252-79745271 | Msa1080310:intron | 35.0% | |
| TATTGTCTGAGTTGCAGATA+AGG | - | chr7_2:79746038-79746057 | Msa1080310:intron | 35.0% | |
| TATATCAATCAGCTGAGCAA+TGG | + | chr7_2:79746341-79746360 | None:intergenic | 35.0% | |
| GAGAGTTATGAATATGACTG+TGG | - | chr7_2:79746400-79746419 | Msa1080310:intron | 35.0% | |
| GTTATGAATATGACTGTGGT+TGG | - | chr7_2:79746404-79746423 | Msa1080310:intron | 35.0% | |
| TATGAATATGACTGTGGTTG+GGG | - | chr7_2:79746406-79746425 | Msa1080310:intron | 35.0% | |
| GATTGAATTGCAGGGTAATT+TGG | - | chr7_2:79746433-79746452 | Msa1080310:intron | 35.0% | |
| AATTGCAGGGTAATTTGGAA+TGG | - | chr7_2:79746438-79746457 | Msa1080310:intron | 35.0% | |
| ! | ATTGCAGGGTAATTTGGAAT+GGG | - | chr7_2:79746439-79746458 | Msa1080310:intron | 35.0% |
| TGTGGTAGTATGAATTGTTG+AGG | - | chr7_2:79746498-79746517 | Msa1080310:intron | 35.0% | |
| GAATCTACACACACAAGAAA+TGG | + | chr7_2:79746557-79746576 | None:intergenic | 35.0% | |
| AAGGACAGTAAATGTGTTGT+CGG | + | chr7_2:79746747-79746766 | None:intergenic | 35.0% | |
| ! | TTTGACTTAGTTGTCTGACA+CGG | + | chr7_2:79747377-79747396 | None:intergenic | 35.0% |
| CATGTTCAACCTTGAATCTA+CGG | + | chr7_2:79747430-79747449 | None:intergenic | 35.0% | |
| ! | TGTCCACAGTGCAAATATTT+TGG | - | chr7_2:79747557-79747576 | Msa1080310:CDS | 35.0% |
| GATATAGAATGGCATCTTCA+TGG | - | chr7_2:79747676-79747695 | Msa1080310:intron | 35.0% | |
| TGCATCTAAGCCTGTTAATT+GGG | + | chr7_2:79747730-79747749 | None:intergenic | 35.0% | |
| TGAAAGCAGCAAATACAACA+AGG | - | chr7_2:79747772-79747791 | Msa1080310:intron | 35.0% | |
| !! | GCACAACATTTAAGTTGATC+GGG | - | chr7_2:79747822-79747841 | Msa1080310:intron | 35.0% |
| !! | AACTAGAAGATGCTTTGAGA+AGG | - | chr7_2:79747912-79747931 | Msa1080310:intron | 35.0% |
| ! | TATCTTTATTTGCTCGCCAT+GGG | - | chr7_2:79747971-79747990 | Msa1080310:intron | 35.0% |
| GGTCAATAGTTGTTAAGTGT+CGG | - | chr7_2:79748046-79748065 | Msa1080310:CDS | 35.0% | |
| CCTTACTCATAGAACATACA+TGG | + | chr7_2:79748192-79748211 | None:intergenic | 35.0% | |
| CCATGTATGTTCTATGAGTA+AGG | - | chr7_2:79748189-79748208 | Msa1080310:intron | 35.0% | |
| TGTTTCTTAATAGCACATGG+TGG | + | chr7_2:79748312-79748331 | None:intergenic | 35.0% | |
| GTGTTCTTCGATTGAGTTTG+GGG | - | chr7_2:79743888-79743907 | Msa1080310:three_prime_UTR | 40.0% | |
| ! | TTTGGGGTTTGAATCACTGA+TGG | - | chr7_2:79743904-79743923 | Msa1080310:three_prime_UTR | 40.0% |
| GAAGAAACGAAACATTGGAG+CGG | + | chr7_2:79744164-79744183 | None:intergenic | 40.0% | |
| TGCAGTGTAGTGTGCATATA+TGG | + | chr7_2:79744277-79744296 | None:intergenic | 40.0% | |
| ! | ACAGCACTTTTCAACTGATC+AGG | + | chr7_2:79744561-79744580 | None:intergenic | 40.0% |
| GAAGATATCAAGGAGCTTCT+TGG | - | chr7_2:79744582-79744601 | Msa1080310:intron | 40.0% | |
| ! | TCTTTTATCATGCCCCTATG+AGG | + | chr7_2:79744819-79744838 | None:intergenic | 40.0% |
| TAATGGAGCTACTGTATTGC+AGG | - | chr7_2:79745041-79745060 | Msa1080310:three_prime_UTR | 40.0% | |
| ! | AAGTTTCTTGCTGTCAGAGA+AGG | - | chr7_2:79745165-79745184 | Msa1080310:intron | 40.0% |
| TTTATGCAATTCGAGAAGGC+AGG | - | chr7_2:79745543-79745562 | Msa1080310:intron | 40.0% | |
| TGTACTTCTGCTGTTGCATT+TGG | - | chr7_2:79745891-79745910 | Msa1080310:intron | 40.0% | |
| GATCAATCCTGACATTCCAA+AGG | - | chr7_2:79746098-79746117 | Msa1080310:intron | 40.0% | |
| TTCCAAAGGCTCTTCAATTG+AGG | - | chr7_2:79746112-79746131 | Msa1080310:intron | 40.0% | |
| TTCCTCAATTGAAGAGCCTT+TGG | + | chr7_2:79746117-79746136 | None:intergenic | 40.0% | |
| TGACGTGAGTGCTATATTTC+AGG | - | chr7_2:79746212-79746231 | Msa1080310:intron | 40.0% | |
| GACGTGAGTGCTATATTTCA+GGG | - | chr7_2:79746213-79746232 | Msa1080310:intron | 40.0% | |
| TGAGTGCTATATTTCAGGGT+GGG | - | chr7_2:79746217-79746236 | Msa1080310:intron | 40.0% | |
| ATCAAAAGACGACCTTACAC+GGG | + | chr7_2:79746287-79746306 | None:intergenic | 40.0% | |
| CATCAAAAGACGACCTTACA+CGG | + | chr7_2:79746288-79746307 | None:intergenic | 40.0% | |
| ACAATAAAAGTTTCGTCGCC+AGG | + | chr7_2:79746364-79746383 | None:intergenic | 40.0% | |
| ATGAATATGACTGTGGTTGG+GGG | - | chr7_2:79746407-79746426 | Msa1080310:intron | 40.0% | |
| TGTGTACAACTAAAGGGAGA+TGG | - | chr7_2:79746469-79746488 | Msa1080310:intron | 40.0% | |
| GTGTACAACTAAAGGGAGAT+GGG | - | chr7_2:79746470-79746489 | Msa1080310:intron | 40.0% | |
| TGAGAAAATCTACACCATGC+AGG | - | chr7_2:79747056-79747075 | Msa1080310:intron | 40.0% | |
| GAGAAAATCTACACCATGCA+GGG | - | chr7_2:79747057-79747076 | Msa1080310:intron | 40.0% | |
| AGAAAATCTACACCATGCAG+GGG | - | chr7_2:79747058-79747077 | Msa1080310:intron | 40.0% | |
| GTTATATAGGTGTCAGACAC+CGG | + | chr7_2:79747343-79747362 | None:intergenic | 40.0% | |
| GGCTCGTATGAGTGTTATAT+AGG | + | chr7_2:79747356-79747375 | None:intergenic | 40.0% | |
| AAATGTTGATCAACAAGGGG+TGG | - | chr7_2:79747450-79747469 | Msa1080310:intron | 40.0% | |
| AATGTTGATCAACAAGGGGT+GGG | - | chr7_2:79747451-79747470 | Msa1080310:intron | 40.0% | |
| CTGTGTGAGCTGATATAGAA+TGG | - | chr7_2:79747665-79747684 | Msa1080310:intron | 40.0% | |
| GCATCTTCATGGGAACAATT+TGG | - | chr7_2:79747687-79747706 | Msa1080310:intron | 40.0% | |
| GCAAATGTAGCCCAATTAAC+AGG | - | chr7_2:79747717-79747736 | Msa1080310:intron | 40.0% | |
| CTGCATCTAAGCCTGTTAAT+TGG | + | chr7_2:79747731-79747750 | None:intergenic | 40.0% | |
| ! | GCATCTTCTAGTTGTTCTAG+AGG | + | chr7_2:79747905-79747924 | None:intergenic | 40.0% |
| ! | CTATCTTTATTTGCTCGCCA+TGG | - | chr7_2:79747970-79747989 | Msa1080310:intron | 40.0% |
| TCAAGTTCAATCCAAGCAGA+AGG | + | chr7_2:79748445-79748464 | None:intergenic | 40.0% | |
| GGATGTGTTTGTGGTTCGAT+TGG | - | chr7_2:79743806-79743825 | Msa1080310:three_prime_UTR | 45.0% | |
| ! | CGTTTTCCATAAGAAGCTGG+TGG | - | chr7_2:79744086-79744105 | Msa1080310:three_prime_UTR | 45.0% |
| TTCCATAAGAAGCTGGTGGA+AGG | - | chr7_2:79744090-79744109 | Msa1080310:three_prime_UTR | 45.0% | |
| TCCATAAGAAGCTGGTGGAA+GGG | - | chr7_2:79744091-79744110 | Msa1080310:three_prime_UTR | 45.0% | |
| !!! | TAGCGAAGAGGTGTTTTGAG+TGG | - | chr7_2:79744504-79744523 | Msa1080310:intron | 45.0% |
| !! | GGTGTTTTGAGTGGACGATT+CGG | - | chr7_2:79744513-79744532 | Msa1080310:intron | 45.0% |
| ! | TTTGAGTGGACGATTCGGAA+CGG | - | chr7_2:79744518-79744537 | Msa1080310:intron | 45.0% |
| TGTTAGGTCATAGGCCTCAT+AGG | - | chr7_2:79744802-79744821 | Msa1080310:intron | 45.0% | |
| GTTAGGTCATAGGCCTCATA+GGG | - | chr7_2:79744803-79744822 | Msa1080310:intron | 45.0% | |
| TTAGGTCATAGGCCTCATAG+GGG | - | chr7_2:79744804-79744823 | Msa1080310:intron | 45.0% | |
| ! | TTTCTTGCTGTCAGAGAAGG+TGG | - | chr7_2:79745168-79745187 | Msa1080310:intron | 45.0% |
| ! | TTCTTGCTGTCAGAGAAGGT+GGG | - | chr7_2:79745169-79745188 | Msa1080310:intron | 45.0% |
| ! | TGTCAGAGAAGGTGGGTTTA+GGG | - | chr7_2:79745176-79745195 | Msa1080310:intron | 45.0% |
| !! | TGAAGAGCCTTTGGAATGTC+AGG | + | chr7_2:79746108-79746127 | None:intergenic | 45.0% |
| GTGAGTGCTATATTTCAGGG+TGG | - | chr7_2:79746216-79746235 | Msa1080310:intron | 45.0% | |
| ! | TATTTCAGGGTGGGCTTTGA+TGG | - | chr7_2:79746226-79746245 | Msa1080310:intron | 45.0% |
| TTGATGGAGTTGAGACATCC+AGG | - | chr7_2:79746242-79746261 | Msa1080310:intron | 45.0% | |
| TCAAAAGACGACCTTACACG+GGG | + | chr7_2:79746286-79746305 | None:intergenic | 45.0% | |
| GCTCAGCTGATTGATATACC+TGG | - | chr7_2:79746343-79746362 | Msa1080310:intron | 45.0% | |
| TGAATATGACTGTGGTTGGG+GGG | - | chr7_2:79746408-79746427 | Msa1080310:intron | 45.0% | |
| !! | AAAGGGAGATGGGAGTATTG+TGG | - | chr7_2:79746480-79746499 | Msa1080310:intron | 45.0% |
| !! | CTTTGAAATCATCCCCTGCA+TGG | + | chr7_2:79747073-79747092 | None:intergenic | 45.0% |
| CATGCAGGGGATGATTTCAA+AGG | - | chr7_2:79747071-79747090 | Msa1080310:intron | 45.0% | |
| ACGTGTCGTACGAATGTCAT+AGG | + | chr7_2:79747254-79747273 | None:intergenic | 45.0% | |
| TTCCACACACCGTAGATTCA+AGG | - | chr7_2:79747418-79747437 | Msa1080310:intron | 45.0% | |
| AACCTTGAATCTACGGTGTG+TGG | + | chr7_2:79747423-79747442 | None:intergenic | 45.0% | |
| ATGTTGATCAACAAGGGGTG+GGG | - | chr7_2:79747452-79747471 | Msa1080310:intron | 45.0% | |
| !! | TAGTTGTTCTAGAGGCTCTC+GGG | + | chr7_2:79747897-79747916 | None:intergenic | 45.0% |
| !! | CTAGTTGTTCTAGAGGCTCT+CGG | + | chr7_2:79747898-79747917 | None:intergenic | 45.0% |
| TTTATTTGCTCGCCATGGGA+TGG | - | chr7_2:79747975-79747994 | Msa1080310:intron | 45.0% | |
| TTATTTGCTCGCCATGGGAT+GGG | - | chr7_2:79747976-79747995 | Msa1080310:intron | 45.0% | |
| AGTTCAATCCAAGCAGAAGG+TGG | + | chr7_2:79748442-79748461 | None:intergenic | 45.0% | |
| CTGTTGGTCGATGTTCTGAC+AGG | - | chr7_2:79743674-79743693 | Msa1080310:three_prime_UTR | 50.0% | |
| TCGCAGAGAATGTCGAAGCT+AGG | - | chr7_2:79743729-79743748 | Msa1080310:three_prime_UTR | 50.0% | |
| CCATAAGAAGCTGGTGGAAG+GGG | - | chr7_2:79744092-79744111 | Msa1080310:three_prime_UTR | 50.0% | |
| ! | CTGTCAGAGAAGGTGGGTTT+AGG | - | chr7_2:79745175-79745194 | Msa1080310:intron | 50.0% |
| TCCAGGACTGTTCCCATACT+TGG | - | chr7_2:79746259-79746278 | Msa1080310:intron | 50.0% | |
| ACCAAGTATGGGAACAGTCC+TGG | + | chr7_2:79746263-79746282 | None:intergenic | 50.0% | |
| CTTACACGGGGACCAAGTAT+GGG | + | chr7_2:79746274-79746293 | None:intergenic | 50.0% | |
| ! | TGGGGGGTTGATTGAATTGC+AGG | - | chr7_2:79746424-79746443 | Msa1080310:intron | 50.0% |
| ! | GGGGGGTTGATTGAATTGCA+GGG | - | chr7_2:79746425-79746444 | Msa1080310:intron | 50.0% |
| CACTGCACTGCAACAACACA+TGG | + | chr7_2:79746984-79747003 | None:intergenic | 50.0% | |
| GACATTCGTACGACACGTGT+CGG | - | chr7_2:79747256-79747275 | Msa1080310:intron | 50.0% | |
| CAATGTTCCATCCCATCCCA+TGG | + | chr7_2:79747990-79748009 | None:intergenic | 50.0% | |
| TAGAGGTTCCACCTTCTGCT+TGG | - | chr7_2:79748431-79748450 | Msa1080310:five_prime_UTR | 50.0% | |
| CCCCTTCCACCAGCTTCTTA+TGG | + | chr7_2:79744095-79744114 | None:intergenic | 55.0% | |
| TAAGAAGCTGGTGGAAGGGG+AGG | - | chr7_2:79744095-79744114 | Msa1080310:three_prime_UTR | 55.0% | |
| ! | GGAAGGGGAGGTGTACAAGA+TGG | - | chr7_2:79744107-79744126 | Msa1080310:three_prime_UTR | 55.0% |
| CCTTACACGGGGACCAAGTA+TGG | + | chr7_2:79746275-79746294 | None:intergenic | 55.0% | |
| CCATACTTGGTCCCCGTGTA+AGG | - | chr7_2:79746272-79746291 | Msa1080310:intron | 55.0% | |
| !! | AGGAGTGTCGCAGACATCGA+CGG | + | chr7_2:79747234-79747253 | None:intergenic | 55.0% |
| CTAGAGGCTCTCGGGTTTCA+GGG | + | chr7_2:79747889-79747908 | None:intergenic | 55.0% | |
| TCTAGAGGCTCTCGGGTTTC+AGG | + | chr7_2:79747890-79747909 | None:intergenic | 55.0% | |
| GTGGTTCGATTGGAGCAGCC+AGG | - | chr7_2:79743816-79743835 | Msa1080310:three_prime_UTR | 60.0% | |
| TTGCTCGCCATGGGATGGGA+TGG | - | chr7_2:79747980-79747999 | Msa1080310:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 79743662 | 79748466 | 79743662 | ID=Msa1080310;Name=Msa1080310 |
| chr7_2 | mRNA | 79743662 | 79748466 | 79743662 | ID=Msa1080310-mRNA-1;Parent=Msa1080310;Name=Msa1080310-mRNA-1;_AED=0.27;_eAED=0.27;_QI=146|0.85|0.75|1|0.57|0.5|8|977|168 |
| chr7_2 | exon | 79743662 | 79744470 | 79743662 | ID=Msa1080310-mRNA-1:exon:20083;Parent=Msa1080310-mRNA-1 |
| chr7_2 | exon | 79745002 | 79745131 | 79745002 | ID=Msa1080310-mRNA-1:exon:20082;Parent=Msa1080310-mRNA-1 |
| chr7_2 | exon | 79745609 | 79745682 | 79745609 | ID=Msa1080310-mRNA-1:exon:20081;Parent=Msa1080310-mRNA-1 |
| chr7_2 | exon | 79745747 | 79745894 | 79745747 | ID=Msa1080310-mRNA-1:exon:20080;Parent=Msa1080310-mRNA-1 |
| chr7_2 | exon | 79745989 | 79746056 | 79745989 | ID=Msa1080310-mRNA-1:exon:20079;Parent=Msa1080310-mRNA-1 |
| chr7_2 | exon | 79747499 | 79747621 | 79747499 | ID=Msa1080310-mRNA-1:exon:20078;Parent=Msa1080310-mRNA-1 |
| chr7_2 | exon | 79747982 | 79748083 | 79747982 | ID=Msa1080310-mRNA-1:exon:20077;Parent=Msa1080310-mRNA-1 |
| chr7_2 | exon | 79748291 | 79748466 | 79748291 | ID=Msa1080310-mRNA-1:exon:20076;Parent=Msa1080310-mRNA-1 |
| chr7_2 | five_prime_UTR | 79748321 | 79748466 | 79748321 | ID=Msa1080310-mRNA-1:five_prime_utr;Parent=Msa1080310-mRNA-1 |
| chr7_2 | CDS | 79748291 | 79748320 | 79748291 | ID=Msa1080310-mRNA-1:cds;Parent=Msa1080310-mRNA-1 |
| chr7_2 | CDS | 79747982 | 79748083 | 79747982 | ID=Msa1080310-mRNA-1:cds;Parent=Msa1080310-mRNA-1 |
| chr7_2 | CDS | 79747499 | 79747621 | 79747499 | ID=Msa1080310-mRNA-1:cds;Parent=Msa1080310-mRNA-1 |
| chr7_2 | CDS | 79745989 | 79746056 | 79745989 | ID=Msa1080310-mRNA-1:cds;Parent=Msa1080310-mRNA-1 |
| chr7_2 | CDS | 79745747 | 79745894 | 79745747 | ID=Msa1080310-mRNA-1:cds;Parent=Msa1080310-mRNA-1 |
| chr7_2 | CDS | 79745647 | 79745682 | 79745647 | ID=Msa1080310-mRNA-1:cds;Parent=Msa1080310-mRNA-1 |
| chr7_2 | three_prime_UTR | 79745609 | 79745646 | 79745609 | ID=Msa1080310-mRNA-1:three_prime_utr;Parent=Msa1080310-mRNA-1 |
| chr7_2 | three_prime_UTR | 79745002 | 79745131 | 79745002 | ID=Msa1080310-mRNA-1:three_prime_utr;Parent=Msa1080310-mRNA-1 |
| chr7_2 | three_prime_UTR | 79743662 | 79744470 | 79743662 | ID=Msa1080310-mRNA-1:three_prime_utr;Parent=Msa1080310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
