Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429950 | XP_024633847.1 | 97.783 | 406 | 9 | 0 | 1 | 406 | 1 | 406 | 0.0 | 827 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429950 | G7J6B6 | 97.783 | 406 | 9 | 0 | 1 | 406 | 1 | 406 | 0.0 | 827 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006040 | Msa0429950 | 0.802613 | 5.163208e-49 | -8.615850e-47 |
| Msa0015460 | Msa0429950 | 0.824272 | 8.830553e-54 | -8.615850e-47 |
| Msa0015480 | Msa0429950 | 0.801273 | 9.734557e-49 | -8.615850e-47 |
| Msa0037540 | Msa0429950 | -0.818369 | 2.032322e-52 | -8.615850e-47 |
| Msa0037590 | Msa0429950 | -0.818194 | 2.226510e-52 | -8.615850e-47 |
| Msa0043730 | Msa0429950 | 0.819656 | 1.035803e-52 | -8.615850e-47 |
| Msa0054750 | Msa0429950 | 0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa0056030 | Msa0429950 | 0.805365 | 1.382894e-49 | -8.615850e-47 |
| Msa0061150 | Msa0429950 | 0.811468 | 6.897566e-51 | -8.615850e-47 |
| Msa0091570 | Msa0429950 | 0.815655 | 8.273249e-52 | -8.615850e-47 |
| Msa0096940 | Msa0429950 | -0.812376 | 4.373414e-51 | -8.615850e-47 |
| Msa0107250 | Msa0429950 | 0.808886 | 2.484519e-50 | -8.615850e-47 |
| Msa0107280 | Msa0429950 | 0.812689 | 3.736970e-51 | -8.615850e-47 |
| Msa0109590 | Msa0429950 | 0.814135 | 1.796993e-51 | -8.615850e-47 |
| Msa0115390 | Msa0429950 | 0.817340 | 3.469990e-52 | -8.615850e-47 |
| Msa0118540 | Msa0429950 | 0.838454 | 2.847658e-57 | -8.615850e-47 |
| Msa0129190 | Msa0429950 | -0.821379 | 4.166650e-53 | -8.615850e-47 |
| Msa0136390 | Msa0429950 | 0.805599 | 1.234991e-49 | -8.615850e-47 |
| Msa0137820 | Msa0429950 | 0.832745 | 7.931000e-56 | -8.615850e-47 |
| Msa0144970 | Msa0429950 | -0.807030 | 6.168378e-50 | -8.615850e-47 |
| Msa0148120 | Msa0429950 | 0.821822 | 3.291698e-53 | -8.615850e-47 |
| Msa0152170 | Msa0429950 | 0.801846 | 7.426339e-49 | -8.615850e-47 |
| Msa0155880 | Msa0429950 | 0.817023 | 4.089069e-52 | -8.615850e-47 |
| Msa0176330 | Msa0429950 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0178990 | Msa0429950 | 0.817021 | 4.092405e-52 | -8.615850e-47 |
| Msa0183460 | Msa0429950 | 0.835162 | 1.969802e-56 | -8.615850e-47 |
| Msa0186310 | Msa0429950 | 0.848800 | 4.866178e-60 | -8.615850e-47 |
| Msa0186770 | Msa0429950 | 0.800908 | 1.155959e-48 | -8.615850e-47 |
| Msa0188890 | Msa0429950 | 0.809112 | 2.222955e-50 | -8.615850e-47 |
| Msa0229360 | Msa0429950 | 0.805851 | 1.093367e-49 | -8.615850e-47 |
| Msa0231380 | Msa0429950 | 0.805896 | 1.069637e-49 | -8.615850e-47 |
| Msa0236270 | Msa0429950 | 0.841237 | 5.368373e-58 | -8.615850e-47 |
| Msa0372340 | Msa0429950 | 0.831663 | 1.469215e-55 | -8.615850e-47 |
| Msa0377530 | Msa0429950 | 0.819315 | 1.239146e-52 | -8.615850e-47 |
| Msa0377900 | Msa0429950 | -0.816144 | 6.432336e-52 | -8.615850e-47 |
| Msa0379410 | Msa0429950 | 0.802031 | 6.803524e-49 | -8.615850e-47 |
| Msa0380040 | Msa0429950 | 0.864543 | 1.127529e-64 | -8.615850e-47 |
| Msa0384540 | Msa0429950 | 0.808194 | 3.490530e-50 | -8.615850e-47 |
| Msa0385490 | Msa0429950 | 0.814502 | 1.491104e-51 | -8.615850e-47 |
| Msa0386040 | Msa0429950 | 0.830274 | 3.220075e-55 | -8.615850e-47 |
| Msa0387910 | Msa0429950 | 0.805209 | 1.491083e-49 | -8.615850e-47 |
| Msa0389810 | Msa0429950 | 0.815101 | 1.098722e-51 | -8.615850e-47 |
| Msa0392940 | Msa0429950 | 0.803005 | 4.285869e-49 | -8.615850e-47 |
| Msa0394340 | Msa0429950 | 0.836972 | 6.839104e-57 | -8.615850e-47 |
| Msa0426810 | Msa0429950 | 0.800588 | 1.343461e-48 | -8.615850e-47 |
| Msa0429290 | Msa0429950 | 0.858742 | 6.685797e-63 | -8.615850e-47 |
| Msa0429950 | Msa0436190 | 0.818293 | 2.114001e-52 | -8.615850e-47 |
| Msa0429950 | Msa0442200 | 0.828841 | 7.183672e-55 | -8.615850e-47 |
| Msa0429950 | Msa0468130 | 0.819205 | 1.312317e-52 | -8.615850e-47 |
| Msa0429950 | Msa0473830 | -0.815624 | 8.402516e-52 | -8.615850e-47 |
| Msa0429950 | Msa0475580 | 0.854218 | 1.425027e-61 | -8.615850e-47 |
| Msa0429950 | Msa0477260 | 0.801663 | 8.095753e-49 | -8.615850e-47 |
| Msa0429950 | Msa0489610 | 0.865961 | 4.037999e-65 | -8.615850e-47 |
| Msa0429950 | Msa0493920 | 0.802240 | 6.162854e-49 | -8.615850e-47 |
| Msa0429950 | Msa0500720 | 0.958037 | 6.316660e-116 | -8.615850e-47 |
| Msa0429950 | Msa0517490 | 0.828901 | 6.949524e-55 | -8.615850e-47 |
| Msa0429950 | Msa0517840 | 0.812104 | 5.014056e-51 | -8.615850e-47 |
| Msa0429950 | Msa0518070 | -0.809283 | 2.042776e-50 | -8.615850e-47 |
| Msa0429950 | Msa0519220 | 0.868693 | 5.402093e-66 | -8.615850e-47 |
| Msa0429950 | Msa0524600 | 0.802744 | 4.851688e-49 | -8.615850e-47 |
| Msa0429950 | Msa0532540 | 0.809911 | 1.496955e-50 | -8.615850e-47 |
| Msa0429950 | Msa0534410 | 0.812310 | 4.520823e-51 | -8.615850e-47 |
| Msa0429950 | Msa0534900 | 0.813564 | 2.401705e-51 | -8.615850e-47 |
| Msa0429950 | Msa0545080 | 0.834505 | 2.883723e-56 | -8.615850e-47 |
| Msa0429950 | Msa0553220 | -0.806025 | 1.005129e-49 | -8.615850e-47 |
| Msa0429950 | Msa0562440 | 0.801715 | 7.900809e-49 | -8.615850e-47 |
| Msa0429950 | Msa0585900 | 0.810779 | 9.726599e-51 | -8.615850e-47 |
| Msa0429950 | Msa0587030 | 0.814408 | 1.564584e-51 | -8.615850e-47 |
| Msa0429950 | Msa0588240 | 0.819797 | 9.615726e-53 | -8.615850e-47 |
| Msa0429950 | Msa0589390 | 0.817735 | 2.826231e-52 | -8.615850e-47 |
| Msa0429950 | Msa0590650 | 0.833812 | 4.301568e-56 | -8.615850e-47 |
| Msa0429950 | Msa0594910 | 0.815865 | 7.425000e-52 | -8.615850e-47 |
| Msa0429950 | Msa0602370 | 0.812215 | 4.742569e-51 | -8.615850e-47 |
| Msa0429950 | Msa0607510 | 0.838023 | 3.679360e-57 | -8.615850e-47 |
| Msa0429950 | Msa0626850 | 0.804437 | 2.161653e-49 | -8.615850e-47 |
| Msa0429950 | Msa0626940 | 0.807103 | 5.952648e-50 | -8.615850e-47 |
| Msa0429950 | Msa0629650 | 0.823614 | 1.259616e-53 | -8.615850e-47 |
| Msa0429950 | Msa0630950 | 0.812462 | 4.188691e-51 | -8.615850e-47 |
| Msa0429950 | Msa0631350 | 0.801524 | 8.644053e-49 | -8.615850e-47 |
| Msa0429950 | Msa0659140 | 0.802493 | 5.464922e-49 | -8.615850e-47 |
| Msa0429950 | Msa0661210 | 0.803720 | 3.046842e-49 | -8.615850e-47 |
| Msa0429950 | Msa0661710 | 0.829488 | 5.004388e-55 | -8.615850e-47 |
| Msa0429950 | Msa0664970 | 0.834151 | 3.537766e-56 | -8.615850e-47 |
| Msa0429950 | Msa0669190 | 0.817312 | 3.520943e-52 | -8.615850e-47 |
| Msa0429950 | Msa0669720 | 0.810316 | 1.224935e-50 | -8.615850e-47 |
| Msa0429950 | Msa0673470 | 0.827577 | 1.449006e-54 | -8.615850e-47 |
| Msa0429950 | Msa0690550 | 0.809777 | 1.600099e-50 | -8.615850e-47 |
| Msa0429950 | Msa0692110 | 0.816370 | 5.727442e-52 | -8.615850e-47 |
| Msa0429950 | Msa0693790 | 0.815755 | 7.856390e-52 | -8.615850e-47 |
| Msa0429950 | Msa0696420 | 0.812882 | 3.388995e-51 | -8.615850e-47 |
| Msa0429950 | Msa0705600 | 0.823278 | 1.509766e-53 | -8.615850e-47 |
| Msa0429950 | Msa0705820 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0429950 | Msa0723130 | 0.833046 | 6.678060e-56 | -8.615850e-47 |
| Msa0429950 | Msa0743260 | 0.821865 | 3.216349e-53 | -8.615850e-47 |
| Msa0429950 | Msa0747260 | 0.803718 | 3.049975e-49 | -8.615850e-47 |
| Msa0429950 | Msa0784860 | 0.840024 | 1.115228e-57 | -8.615850e-47 |
| Msa0429950 | Msa0790610 | 0.805716 | 1.167014e-49 | -8.615850e-47 |
| Msa0429950 | Msa0791820 | 0.809185 | 2.144239e-50 | -8.615850e-47 |
| Msa0429950 | Msa0818170 | 0.807868 | 4.096353e-50 | -8.615850e-47 |
| Msa0429950 | Msa0861570 | 0.806335 | 8.649384e-50 | -8.615850e-47 |
| Msa0429950 | Msa0869120 | 0.802933 | 4.434390e-49 | -8.615850e-47 |
| Msa0429950 | Msa0870150 | 0.815744 | 7.902231e-52 | -8.615850e-47 |
| Msa0429950 | Msa0874500 | 0.816537 | 5.256050e-52 | -8.615850e-47 |
| Msa0429950 | Msa0874570 | 0.813250 | 2.814998e-51 | -8.615850e-47 |
| Msa0429950 | Msa0874670 | 0.809745 | 1.625845e-50 | -8.615850e-47 |
| Msa0429950 | Msa0900630 | 0.804669 | 1.932893e-49 | -8.615850e-47 |
| Msa0429950 | Msa0901320 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
| Msa0429950 | Msa0905380 | 0.802440 | 5.604312e-49 | -8.615850e-47 |
| Msa0429950 | Msa0933290 | 0.835825 | 1.339073e-56 | -8.615850e-47 |
| Msa0429950 | Msa0935850 | 0.853256 | 2.695460e-61 | -8.615850e-47 |
| Msa0429950 | Msa0937330 | 0.850056 | 2.172597e-60 | -8.615850e-47 |
| Msa0429950 | Msa0944870 | 0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0429950 | Msa0951400 | 0.811569 | 6.557236e-51 | -8.615850e-47 |
| Msa0429950 | Msa0974630 | 0.821513 | 3.879354e-53 | -8.615850e-47 |
| Msa0429950 | Msa0982270 | 0.806711 | 7.204875e-50 | -8.615850e-47 |
| Msa0429950 | Msa0996170 | 0.804431 | 2.166947e-49 | -8.615850e-47 |
| Msa0429950 | Msa1001580 | 0.818231 | 2.183105e-52 | -8.615850e-47 |
| Msa0429950 | Msa1012830 | 0.838778 | 2.349323e-57 | -8.615850e-47 |
| Msa0429950 | Msa1023180 | 0.826470 | 2.666281e-54 | -8.615850e-47 |
| Msa0429950 | Msa1037420 | 0.816293 | 5.958633e-52 | -8.615850e-47 |
| Msa0429950 | Msa1043050 | 0.828507 | 8.650286e-55 | -8.615850e-47 |
| Msa0429950 | Msa1047400 | 0.824533 | 7.667709e-54 | -8.615850e-47 |
| Msa0429950 | Msa1071320 | 0.806498 | 7.988459e-50 | -8.615850e-47 |
| Msa0429950 | Msa1077670 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa0429950 | Msa1089840 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
| Msa0429950 | Msa1094430 | 0.843758 | 1.150877e-58 | -8.615850e-47 |
| Msa0429950 | Msa1109570 | 0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa0429950 | Msa1123810 | 0.809046 | 2.295921e-50 | -8.615850e-47 |
| Msa0429950 | Msa1133230 | 0.814918 | 1.206276e-51 | -8.615850e-47 |
| Msa0429950 | Msa1133250 | 0.820170 | 7.902551e-53 | -8.615850e-47 |
| Msa0429950 | Msa1136540 | 0.810611 | 1.057475e-50 | -8.615850e-47 |
| Msa0429950 | Msa1138870 | 0.801867 | 7.353544e-49 | -8.615850e-47 |
| Msa0429950 | Msa1150710 | 0.822507 | 2.282637e-53 | -8.615850e-47 |
| Msa0429950 | Msa1171870 | 0.820621 | 6.225150e-53 | -8.615850e-47 |
| Msa0429950 | Msa1190970 | 0.807996 | 3.847508e-50 | -8.615850e-47 |
| Msa0429950 | Msa1211000 | 0.842820 | 2.047522e-58 | -8.615850e-47 |
| Msa0429950 | Msa1244640 | 0.801819 | 7.519790e-49 | -8.615850e-47 |
| Msa0429950 | Msa1253810 | 0.828131 | 1.065957e-54 | -8.615850e-47 |
| Msa0429950 | Msa1259400 | 0.837879 | 4.005774e-57 | -8.615850e-47 |
| Msa0429950 | Msa1260130 | 0.810212 | 1.289334e-50 | -8.615850e-47 |
| Msa0429950 | Msa1269300 | 0.805125 | 1.552035e-49 | -8.615850e-47 |
| Msa0429950 | Msa1274560 | 0.800612 | 1.328452e-48 | -8.615850e-47 |
| Msa0429950 | Msa1276440 | 0.801869 | 7.346376e-49 | -8.615850e-47 |
| Msa0429950 | Msa1293590 | 0.814570 | 1.440321e-51 | -8.615850e-47 |
| Msa0429950 | Msa1299010 | 0.821045 | 4.974285e-53 | -8.615850e-47 |
| Msa0429950 | Msa1306430 | 0.820365 | 7.128390e-53 | -8.615850e-47 |
| Msa0429950 | Msa1306750 | 0.800540 | 1.373984e-48 | -8.615850e-47 |
| Msa0429950 | Msa1307740 | 0.815096 | 1.101430e-51 | -8.615850e-47 |
| Msa0429950 | Msa1340020 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
| Msa0429950 | Msa1348600 | 0.800138 | 1.658748e-48 | -8.615850e-47 |
| Msa0429950 | Msa1359630 | 0.822874 | 1.875674e-53 | -8.615850e-47 |
| Msa0429950 | Msa1363700 | 0.813513 | 2.463626e-51 | -8.615850e-47 |
| Msa0429950 | Msa1366650 | 0.822332 | 2.506701e-53 | -8.615850e-47 |
| Msa0429950 | Msa1388860 | 0.822205 | 2.683013e-53 | -8.615850e-47 |
| Msa0429950 | Msa1435750 | 0.804274 | 2.336872e-49 | -8.615850e-47 |
| Msa0429950 | Msa1438700 | 0.802106 | 6.567002e-49 | -8.615850e-47 |
| Msa0429950 | Msa1448630 | 0.831703 | 1.436643e-55 | -8.615850e-47 |
| Msa0429950 | Msa1450180 | 0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa0429950 | Msa1452470 | 0.842150 | 3.082917e-58 | -8.615850e-47 |
| Msa0429950 | Msa1454950 | 0.801706 | 7.934380e-49 | -8.615850e-47 |
| Msa0429950 | Msa1465960 | 0.841301 | 5.163269e-58 | -8.615850e-47 |
| Msa0242680 | Msa0429950 | 0.802152 | 6.424974e-49 | -8.615850e-47 |
| Msa0244270 | Msa0429950 | 0.802333 | 5.897500e-49 | -8.615850e-47 |
| Msa0256330 | Msa0429950 | 0.805066 | 1.596906e-49 | -8.615850e-47 |
| Msa0270660 | Msa0429950 | 0.804400 | 2.199876e-49 | -8.615850e-47 |
| Msa0271360 | Msa0429950 | 0.804593 | 2.005195e-49 | -8.615850e-47 |
| Msa0295330 | Msa0429950 | 0.806738 | 7.108940e-50 | -8.615850e-47 |
| Msa0306710 | Msa0429950 | 0.812314 | 4.512311e-51 | -8.615850e-47 |
| Msa0307470 | Msa0429950 | 0.802307 | 5.970627e-49 | -8.615850e-47 |
| Msa0320430 | Msa0429950 | 0.808952 | 2.405347e-50 | -8.615850e-47 |
| Msa0347610 | Msa0429950 | 0.839667 | 1.381294e-57 | -8.615850e-47 |
| Msa0347680 | Msa0429950 | 0.819111 | 1.378937e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429950 | MtrunA17_Chr3g0133761 | 97.783 | 406 | 9 | 0 | 1 | 406 | 1 | 406 | 0.0 | 827 |
| Msa0429950 | MtrunA17_Chr4g0045091 | 48.276 | 406 | 200 | 6 | 5 | 406 | 11 | 410 | 1.38e-127 | 374 |
| Msa0429950 | MtrunA17_Chr5g0404441 | 23.022 | 278 | 176 | 6 | 24 | 271 | 139 | 408 | 5.43e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429950 | AT5G44250.1 | 54.479 | 413 | 171 | 7 | 1 | 406 | 1 | 403 | 5.92e-154 | 441 |
| Msa0429950 | AT2G15695.1 | 46.588 | 425 | 196 | 9 | 5 | 406 | 4 | 420 | 4.17e-130 | 381 |
| Msa0429950 | AT5G44250.2 | 52.244 | 312 | 132 | 8 | 102 | 406 | 1 | 302 | 1.04e-103 | 309 |
Find 109 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTTAAAGACTGTATTTC+TGG | 0.115235 | 3_2:+81530756 | Msa0429950:CDS |
| CTTAACCCAACCATTATTTA+AGG | 0.118119 | 3_2:+81527791 | Msa0429950:five_prime_UTR |
| GTCGTTCGGCCTCTTATTTC+AGG | 0.168695 | 3_2:-81532021 | None:intergenic |
| TTTCCTTTGTTCCAGATAAT+TGG | 0.211588 | 3_2:+81530196 | Msa0429950:intron |
| GCAAGAATTGTGGCTTTATC+AGG | 0.230117 | 3_2:-81529390 | None:intergenic |
| TGCAAAAGCTTGTATGTTAA+AGG | 0.287646 | 3_2:+81530074 | Msa0429950:CDS |
| ATCCACCAAGATTTGCTTCA+TGG | 0.298508 | 3_2:+81530865 | Msa0429950:CDS |
| AACTGCCTTGCCAAGGATTT+CGG | 0.314879 | 3_2:-81531533 | None:intergenic |
| AAGATTTGAAGACGAGATAC+TGG | 0.321454 | 3_2:+81531579 | Msa0429950:CDS |
| GGTTTGGTGGTAGATATTAT+TGG | 0.332978 | 3_2:+81528047 | Msa0429950:CDS |
| AACAACCTCAACTAGTTTCC+AGG | 0.333050 | 3_2:+81531660 | Msa0429950:CDS |
| TTGTATGTTAAAGGTTCTTC+AGG | 0.335530 | 3_2:+81530083 | Msa0429950:CDS |
| GTTTGGTGGTAGATATTATT+GGG | 0.338411 | 3_2:+81528048 | Msa0429950:CDS |
| ATATGCAGGTGCTGAAAATT+AGG | 0.346502 | 3_2:+81530016 | Msa0429950:intron |
| TTTATGTGGAAAATCGTATA+GGG | 0.346874 | 3_2:-81527934 | None:intergenic |
| TCCCAATCCTCGACTGTCTT+GGG | 0.350284 | 3_2:-81531856 | None:intergenic |
| TTGAAAATTTATTAAATGTT+CGG | 0.353515 | 3_2:+81527980 | Msa0429950:five_prime_UTR |
| ATCAACGCAAATGGGGTTCT+TGG | 0.367337 | 3_2:+81531808 | Msa0429950:CDS |
| ATCTCTACTCTTCTCTTGGT+TGG | 0.375249 | 3_2:+81528164 | Msa0429950:CDS |
| CGTCCGAGCATCAACGCAAA+TGG | 0.384206 | 3_2:+81531799 | Msa0429950:CDS |
| CAAGAAACAACCTTAAATAA+TGG | 0.385390 | 3_2:-81527801 | None:intergenic |
| ATTCAAATCTGTTGAGGAAA+AGG | 0.398136 | 3_2:-81530920 | None:intergenic |
| GTCCGAGCATCAACGCAAAT+GGG | 0.398716 | 3_2:+81531800 | Msa0429950:CDS |
| GGAGTGTGAAACACATAATA+TGG | 0.404992 | 3_2:+81530222 | Msa0429950:CDS |
| GTGGATCTCTACTCTTCTCT+TGG | 0.413753 | 3_2:+81528160 | Msa0429950:CDS |
| CCCCAAGACAGTCGAGGATT+GGG | 0.422191 | 3_2:+81531855 | Msa0429950:CDS |
| AACAACCTTAAATAATGGTT+GGG | 0.434124 | 3_2:-81527796 | None:intergenic |
| AAATCACTAGTAAAATCAAC+TGG | 0.445291 | 3_2:-81530798 | None:intergenic |
| CCTTTGTTCCAGATAATTGG+TGG | 0.445347 | 3_2:+81530199 | Msa0429950:intron |
| ATCCCAATCCTCGACTGTCT+TGG | 0.451738 | 3_2:-81531857 | None:intergenic |
| TCCCCAAGACAGTCGAGGAT+TGG | 0.456587 | 3_2:+81531854 | Msa0429950:CDS |
| TGTACAATTCAAGCAGGAAA+TGG | 0.456697 | 3_2:-81532102 | None:intergenic |
| TGCGTTGATGCTCGGACGGG+TGG | 0.459759 | 3_2:-81531794 | None:intergenic |
| AAATTTGAAACAACTTCAAA+AGG | 0.460042 | 3_2:-81531140 | None:intergenic |
| AATCGCAGCGTGCAGAGTAT+TGG | 0.468481 | 3_2:+81530940 | Msa0429950:CDS |
| AAACAACCTTAAATAATGGT+TGG | 0.475627 | 3_2:-81527797 | None:intergenic |
| CAGTCGAGGATTGGGATGTC+AGG | 0.477065 | 3_2:+81531863 | Msa0429950:CDS |
| GAATTTGTCTCCTAGTTCAA+TGG | 0.477213 | 3_2:+81531705 | Msa0429950:CDS |
| ACCCCATTTGCGTTGATGCT+CGG | 0.485276 | 3_2:-81531802 | None:intergenic |
| CGTATAGGGTTGAAGAATTG+AGG | 0.485580 | 3_2:-81527920 | None:intergenic |
| GCAATCCATGAAGCAAATCT+TGG | 0.486555 | 3_2:-81530870 | None:intergenic |
| TTCAAATCTGTTGAGGAAAA+GGG | 0.487836 | 3_2:-81530919 | None:intergenic |
| GAGGGAATTTACAAGTCGTT+CGG | 0.493020 | 3_2:-81532035 | None:intergenic |
| ATTGCCAATGGCATAGCATC+TGG | 0.497699 | 3_2:+81530888 | Msa0429950:CDS |
| TTCTTAGCTGCTTACAGTGG+TGG | 0.506203 | 3_2:-81530976 | None:intergenic |
| GACGAGATACTGGGCATAGA+GGG | 0.506350 | 3_2:+81531589 | Msa0429950:CDS |
| CCTTGGCGGAGATGTCAAAC+TGG | 0.512208 | 3_2:+81531181 | Msa0429950:CDS |
| ATAGCAGTTTCATATTCATC+CGG | 0.512962 | 3_2:-81531508 | None:intergenic |
| CTTTGTTCCAGATAATTGGT+GGG | 0.515096 | 3_2:+81530200 | Msa0429950:intron |
| CATTTGCGTTGATGCTCGGA+CGG | 0.515549 | 3_2:-81531798 | None:intergenic |
| GCTTTCCTCAGCTCAGAGAA+AGG | 0.520012 | 3_2:-81531634 | None:intergenic |
| ACTGCTATCACCGAAATCCT+TGG | 0.520140 | 3_2:+81531523 | Msa0429950:CDS |
| ATATTATTGGGGAAGAAGAA+AGG | 0.523616 | 3_2:+81528060 | Msa0429950:CDS |
| AGACGAGATACTGGGCATAG+AGG | 0.526916 | 3_2:+81531588 | Msa0429950:CDS |
| ATTTGCGTTGATGCTCGGAC+GGG | 0.528746 | 3_2:-81531797 | None:intergenic |
| TTCCATCGACTAAAAGACCT+TGG | 0.530048 | 3_2:+81531164 | Msa0429950:CDS |
| GAGTTTCAATCTTGTTGTGA+TGG | 0.530542 | 3_2:+81527720 | Msa0429950:five_prime_UTR |
| TCGTGATACTCCATTGAACT+AGG | 0.530731 | 3_2:-81531715 | None:intergenic |
| GAGTAATGTGATTGAGAAGC+TGG | 0.532872 | 3_2:+81532079 | Msa0429950:three_prime_UTR |
| TATCACGATGATAAAGATGT+TGG | 0.537975 | 3_2:+81531730 | Msa0429950:CDS |
| CAGGACTATTATCTGGTACA+AGG | 0.538017 | 3_2:+81531902 | Msa0429950:CDS |
| GGATAGTTGTGGTGTTTGCA+TGG | 0.544147 | 3_2:+81528104 | Msa0429950:CDS |
| TTTGTTCCAGATAATTGGTG+GGG | 0.545379 | 3_2:+81530201 | Msa0429950:intron |
| ACTAGTAAAATCAACTGGAC+AGG | 0.545468 | 3_2:-81530793 | None:intergenic |
| CAAGAATTGTGGCTTTATCA+GGG | 0.554383 | 3_2:-81529389 | None:intergenic |
| AAATACAGTCTTTAACAAGC+TGG | 0.554977 | 3_2:-81530752 | None:intergenic |
| TTTGCTTCATGGATTGCCAA+TGG | 0.557728 | 3_2:+81530876 | Msa0429950:CDS |
| CCCAATCCTCGACTGTCTTG+GGG | 0.558714 | 3_2:-81531855 | None:intergenic |
| ATCCATGAAGCAAATCTTGG+TGG | 0.558816 | 3_2:-81530867 | None:intergenic |
| GAGATGTCAAACTGGTAAAG+TGG | 0.559575 | 3_2:+81531189 | Msa0429950:CDS |
| ACATATTGAGAAATTGAGAA+TGG | 0.561373 | 3_2:-81528201 | None:intergenic |
| AAAGCATTTGATGAGATATG+TGG | 0.562448 | 3_2:+81528141 | Msa0429950:CDS |
| AAGACCAGATGCTATGCCAT+TGG | 0.564508 | 3_2:-81530892 | None:intergenic |
| TCTGTAGCAGATGAACGAAA+AGG | 0.568832 | 3_2:+81531754 | Msa0429950:CDS |
| AGGAAGCACGAAAACGAGGT+TGG | 0.571360 | 3_2:-81527830 | None:intergenic |
| AATATCAACAGCAAGAATTG+TGG | 0.572618 | 3_2:-81529400 | None:intergenic |
| ACAACCTCAACTAGTTTCCA+GGG | 0.574936 | 3_2:+81531661 | Msa0429950:CDS |
| TAAAATGCATCCGACGCTCA+AGG | 0.583132 | 3_2:+81531947 | Msa0429950:CDS |
| GCGTTGATGCTCGGACGGGT+GGG | 0.583643 | 3_2:-81531793 | None:intergenic |
| CTAGGAGACAAATTCTCACT+CGG | 0.584986 | 3_2:-81531697 | None:intergenic |
| TAGATTGTGAGAAAGCGAAT+GGG | 0.585596 | 3_2:+81528083 | Msa0429950:CDS |
| TGGAGTTCCTCTCCTCATGT+AGG | 0.587941 | 3_2:+81531209 | Msa0429950:CDS |
| GTAGATTGTGAGAAAGCGAA+TGG | 0.588482 | 3_2:+81528082 | Msa0429950:CDS |
| TATTCTAAATGAACTAGTTG+AGG | 0.588736 | 3_2:+81529419 | Msa0429950:CDS |
| AAATTGCAACTGCCTTGCCA+AGG | 0.588829 | 3_2:-81531540 | None:intergenic |
| CCAGTTTGACATCTCCGCCA+AGG | 0.589341 | 3_2:-81531181 | None:intergenic |
| TCGGAGCAACAGCAAAACCC+TGG | 0.590217 | 3_2:-81531678 | None:intergenic |
| GTGGTAGAACCTGAAATAAG+AGG | 0.593905 | 3_2:+81532012 | Msa0429950:three_prime_UTR |
| AGTAACTGTACAATTCAAGC+AGG | 0.597709 | 3_2:-81532108 | None:intergenic |
| CATCGACTAAAAGACCTTGG+CGG | 0.597851 | 3_2:+81531167 | Msa0429950:CDS |
| AGATTTGAAGACGAGATACT+GGG | 0.597865 | 3_2:+81531580 | Msa0429950:CDS |
| TGTGACACTTTCAAAACAGA+TGG | 0.600394 | 3_2:-81530843 | None:intergenic |
| GCTGCGATTCAAATCTGTTG+AGG | 0.620937 | 3_2:-81530926 | None:intergenic |
| CTGATCCTTTCTCTGAGCTG+AGG | 0.621628 | 3_2:+81531629 | Msa0429950:CDS |
| GTGACTGATATCACTGTGAC+AGG | 0.622359 | 3_2:+81532160 | Msa0429950:three_prime_UTR |
| TATCACCGAAATCCTTGGCA+AGG | 0.640870 | 3_2:+81531528 | Msa0429950:CDS |
| AATGTTACAACCTTGAGCGT+CGG | 0.641835 | 3_2:-81531957 | None:intergenic |
| TCCGAGCATCAACGCAAATG+GGG | 0.642055 | 3_2:+81531801 | Msa0429950:CDS |
| TTGTGTCCCCAAGACAGTCG+AGG | 0.643365 | 3_2:+81531849 | Msa0429950:CDS |
| GTGACACTTTCAAAACAGAT+GGG | 0.646924 | 3_2:-81530842 | None:intergenic |
| TTTGGTGGTAGATATTATTG+GGG | 0.651148 | 3_2:+81528049 | Msa0429950:CDS |
| ATACTGACCTACATGAGGAG+AGG | 0.654599 | 3_2:-81531216 | None:intergenic |
| GTTAAGGAAGCACGAAAACG+AGG | 0.657118 | 3_2:-81527834 | None:intergenic |
| AAAACCCTGGAAACTAGTTG+AGG | 0.669085 | 3_2:-81531665 | None:intergenic |
| TCAAGATACTGACCTACATG+AGG | 0.682155 | 3_2:-81531221 | None:intergenic |
| ATACAAGTTTGAATCTGATG+TGG | 0.699426 | 3_2:+81531993 | Msa0429950:three_prime_UTR |
| GAAAGCGAATGGGATAGTTG+TGG | 0.713351 | 3_2:+81528093 | Msa0429950:CDS |
| GACTATTATCTGGTACAAGG+AGG | 0.724614 | 3_2:+81531905 | Msa0429950:CDS |
| GTTTGCATGGATGTCAAGTG+AGG | 0.735962 | 3_2:+81528117 | Msa0429950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTATTTCTTCTATT+GGG | - | chr3_2:81527689-81527708 | None:intergenic | 10.0% |
| !!! | TTATTTTTTATTTCTTCTAT+TGG | - | chr3_2:81527690-81527709 | None:intergenic | 10.0% |
| !! | GAAGAAATAAAAAATAATAA+TGG | + | chr3_2:81527693-81527712 | Msa0429950:five_prime_UTR | 10.0% |
| !!! | CATTTAATAAATTTTCAAAT+GGG | - | chr3_2:81527978-81527997 | None:intergenic | 10.0% |
| !!! | ACATTTAATAAATTTTCAAA+TGG | - | chr3_2:81527979-81527998 | None:intergenic | 10.0% |
| !! | TTGAAAATTTATTAAATGTT+CGG | + | chr3_2:81527980-81527999 | Msa0429950:five_prime_UTR | 10.0% |
| !!! | TTTATTTACATTTTTACCAT+TGG | + | chr3_2:81530137-81530156 | Msa0429950:intron | 15.0% |
| !!! | TAGTATTTTATTTGTGTTTT+AGG | + | chr3_2:81530592-81530611 | Msa0429950:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGTGAAC+AGG | - | chr3_2:81530663-81530682 | None:intergenic | 15.0% |
| !!! | AAATTTTACTTGAATATGTT+AGG | + | chr3_2:81531469-81531488 | Msa0429950:intron | 15.0% |
| !!! | TGAAAAATTCGATTTTTATG+TGG | - | chr3_2:81527951-81527970 | None:intergenic | 20.0% |
| !!! | ATTTTTTGAAAAGTATCACT+TGG | + | chr3_2:81528959-81528978 | Msa0429950:intron | 20.0% |
| !! | TTGTGCACATTAATTTAAAT+AGG | + | chr3_2:81529144-81529163 | Msa0429950:intron | 20.0% |
| !! | TGTGCACATTAATTTAAATA+GGG | + | chr3_2:81529145-81529164 | Msa0429950:intron | 20.0% |
| !!! | ACATTTTTTAAAATGTCCTT+CGG | - | chr3_2:81529184-81529203 | None:intergenic | 20.0% |
| !! | CAAATTTAGCTAAAAATGTT+AGG | - | chr3_2:81529211-81529230 | None:intergenic | 20.0% |
| !!! | TTTAGACATTTTCTAATCAA+CGG | - | chr3_2:81529623-81529642 | None:intergenic | 20.0% |
| !! | CTAAGTAAGTATAGATTAAT+TGG | + | chr3_2:81529686-81529705 | Msa0429950:intron | 20.0% |
| !!! | AACTATATGAGCAATTTTTT+TGG | - | chr3_2:81529723-81529742 | None:intergenic | 20.0% |
| !! | ATCATTTAAATTATGAAGCA+TGG | - | chr3_2:81530414-81530433 | None:intergenic | 20.0% |
| !!! | TTTCCCTTTACTAATTATTT+TGG | + | chr3_2:81530439-81530458 | Msa0429950:intron | 20.0% |
| !! | TGTCCAAAATAATTAGTAAA+GGG | - | chr3_2:81530445-81530464 | None:intergenic | 20.0% |
| !! | TTGTCCAAAATAATTAGTAA+AGG | - | chr3_2:81530446-81530465 | None:intergenic | 20.0% |
| !!! | AAATTTGAAACAACTTCAAA+AGG | - | chr3_2:81531143-81531162 | None:intergenic | 20.0% |
| !!! | CAATCTAAAGTACAAAATTA+CGG | - | chr3_2:81531309-81531328 | None:intergenic | 20.0% |
| !!! | ATGAACGAATGTAATTTTTA+TGG | + | chr3_2:81531418-81531437 | Msa0429950:intron | 20.0% |
| !! | AGATTTCAAGATATGTTTTG+AGG | - | chr3_2:81527756-81527775 | None:intergenic | 25.0% |
| ! | AACAACCTTAAATAATGGTT+GGG | - | chr3_2:81527799-81527818 | None:intergenic | 25.0% |
| ! | AAACAACCTTAAATAATGGT+TGG | - | chr3_2:81527800-81527819 | None:intergenic | 25.0% |
| ! | CAAGAAACAACCTTAAATAA+TGG | - | chr3_2:81527804-81527823 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTGCTGATGTTA+AGG | - | chr3_2:81527853-81527872 | None:intergenic | 25.0% |
| ! | TTTATGTGGAAAATCGTATA+GGG | - | chr3_2:81527937-81527956 | None:intergenic | 25.0% |
| !! | TTTTATGTGGAAAATCGTAT+AGG | - | chr3_2:81527938-81527957 | None:intergenic | 25.0% |
| !!! | TTTTGTAGTGTTGAAAAAGA+AGG | + | chr3_2:81528014-81528033 | Msa0429950:five_prime_UTR | 25.0% |
| ! | TTGAAAAAGAAGGAAAATGT+GGG | + | chr3_2:81528024-81528043 | Msa0429950:exon | 25.0% |
| ! | ACATATTGAGAAATTGAGAA+TGG | - | chr3_2:81528204-81528223 | None:intergenic | 25.0% |
| ! | AAATCCATGTCTTGTAAAAT+TGG | - | chr3_2:81528323-81528342 | None:intergenic | 25.0% |
| ! | AAATTGAAGCAAAAGAGAAT+TGG | + | chr3_2:81528462-81528481 | Msa0429950:intron | 25.0% |
| ! | CAAACATAAAACAATTATCC+TGG | - | chr3_2:81528599-81528618 | None:intergenic | 25.0% |
| ! | TTCAAAAACCTATAAAGCAA+AGG | - | chr3_2:81528683-81528702 | None:intergenic | 25.0% |
| !! | TTAACATGGACCTTTTTAAA+AGG | + | chr3_2:81528927-81528946 | Msa0429950:intron | 25.0% |
| !!! | TTATAGCAAGCCTTTTAAAA+AGG | - | chr3_2:81528940-81528959 | None:intergenic | 25.0% |
| ! | TATAAAGAAGGCTGTTAAAT+AGG | - | chr3_2:81528993-81529012 | None:intergenic | 25.0% |
| ! | ATTAGTCAACATAAAGACAT+AGG | - | chr3_2:81529051-81529070 | None:intergenic | 25.0% |
| !! | TATGTCTTTATGTTGACTAA+TGG | + | chr3_2:81529050-81529069 | Msa0429950:intron | 25.0% |
| !! | ATGTCTTTATGTTGACTAAT+GGG | + | chr3_2:81529051-81529070 | Msa0429950:intron | 25.0% |
| !!! | CATTTTTTAAAATGTCCTTC+GGG | - | chr3_2:81529183-81529202 | None:intergenic | 25.0% |
| !!! | ATTTGCTTTTAAGAAATCCT+TGG | + | chr3_2:81529226-81529245 | Msa0429950:intron | 25.0% |
| ! | GCTTATTAACTAAATAAGCT+AGG | - | chr3_2:81529252-81529271 | None:intergenic | 25.0% |
| ! | TGTTAAGTTCAATATCCATA+GGG | - | chr3_2:81529347-81529366 | None:intergenic | 25.0% |
| ! | ATGTTAAGTTCAATATCCAT+AGG | - | chr3_2:81529348-81529367 | None:intergenic | 25.0% |
| ! | TATTCTAAATGAACTAGTTG+AGG | + | chr3_2:81529419-81529438 | Msa0429950:CDS | 25.0% |
| ! | AATTTACACTAAAATGAGTC+TGG | + | chr3_2:81529552-81529571 | Msa0429950:intron | 25.0% |
| !! | TTAGACATTTTCTAATCAAC+GGG | - | chr3_2:81529622-81529641 | None:intergenic | 25.0% |
| !!! | TCTTCAGGTATTTTAACTAT+AGG | + | chr3_2:81530098-81530117 | Msa0429950:intron | 25.0% |
| !! | CACATAATATGGTATGTTTT+CGG | + | chr3_2:81530233-81530252 | Msa0429950:intron | 25.0% |
| ! | ATCCTCAAATAAATTGCTAA+AGG | - | chr3_2:81530259-81530278 | None:intergenic | 25.0% |
| ! | TTTAAATTATGAAGCATGGA+TGG | - | chr3_2:81530410-81530429 | None:intergenic | 25.0% |
| ! | AAATCACTAGTAAAATCAAC+TGG | - | chr3_2:81530801-81530820 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTACTAGTGATT+TGG | + | chr3_2:81530800-81530819 | Msa0429950:CDS | 25.0% |
| !!! | GTTGATTTTACTAGTGATTT+GGG | + | chr3_2:81530801-81530820 | Msa0429950:CDS | 25.0% |
| !! | AAAAAATGGAGGTAATTTGT+TGG | - | chr3_2:81531023-81531042 | None:intergenic | 25.0% |
| !!! | AAATTACCTCCATTTTTTTG+AGG | + | chr3_2:81531025-81531044 | Msa0429950:intron | 25.0% |
| ! | TCTGAACAAAAAATGAGATA+CGG | - | chr3_2:81531104-81531123 | None:intergenic | 25.0% |
| ! | TAATTATGCATAATAGTGCA+CGG | + | chr3_2:81531245-81531264 | Msa0429950:intron | 25.0% |
| !! | ATGCATTTTATAGGATTGAA+AGG | - | chr3_2:81531937-81531956 | None:intergenic | 25.0% |
| CTTAACCCAACCATTATTTA+AGG | + | chr3_2:81527791-81527810 | Msa0429950:five_prime_UTR | 30.0% | |
| TTGAGGAAGAAAAAGAAGAA+GGG | - | chr3_2:81527906-81527925 | None:intergenic | 30.0% | |
| ATTGAGGAAGAAAAAGAAGA+AGG | - | chr3_2:81527907-81527926 | None:intergenic | 30.0% | |
| GTTGAAAAAGAAGGAAAATG+TGG | + | chr3_2:81528023-81528042 | Msa0429950:exon | 30.0% | |
| TGAAAAAGAAGGAAAATGTG+GGG | + | chr3_2:81528025-81528044 | Msa0429950:exon | 30.0% | |
| ! | GTTTGGTGGTAGATATTATT+GGG | + | chr3_2:81528048-81528067 | Msa0429950:CDS | 30.0% |
| ! | TTTGGTGGTAGATATTATTG+GGG | + | chr3_2:81528049-81528068 | Msa0429950:CDS | 30.0% |
| ATATTATTGGGGAAGAAGAA+AGG | + | chr3_2:81528060-81528079 | Msa0429950:CDS | 30.0% | |
| ! | AAAGCATTTGATGAGATATG+TGG | + | chr3_2:81528141-81528160 | Msa0429950:CDS | 30.0% |
| TAGTTGTAAATGCCTGATAA+GGG | + | chr3_2:81528266-81528285 | Msa0429950:intron | 30.0% | |
| ! | ACTACCAATTTTACAAGACA+TGG | + | chr3_2:81528316-81528335 | Msa0429950:intron | 30.0% |
| CATAAAACAATTATCCTGGA+TGG | - | chr3_2:81528595-81528614 | None:intergenic | 30.0% | |
| AACTTCATGAAGCTAATATG+CGG | - | chr3_2:81528634-81528653 | None:intergenic | 30.0% | |
| TAGCTTCATGAAGTTTGATT+AGG | + | chr3_2:81528639-81528658 | Msa0429950:intron | 30.0% | |
| TCATGAAGTTTGATTAGGAT+TGG | + | chr3_2:81528644-81528663 | Msa0429950:intron | 30.0% | |
| AGACAATACTATTTGTTTGC+TGG | + | chr3_2:81528705-81528724 | Msa0429950:intron | 30.0% | |
| TAGTCTCTATACTGTATAGA+TGG | - | chr3_2:81528805-81528824 | None:intergenic | 30.0% | |
| ! | GTTGGCTTATTTACTTAACA+TGG | + | chr3_2:81528913-81528932 | Msa0429950:intron | 30.0% |
| CTTATTTAGTTAATAAGCCG+AGG | + | chr3_2:81529254-81529273 | Msa0429950:intron | 30.0% | |
| AATATCAACAGCAAGAATTG+TGG | - | chr3_2:81529403-81529422 | None:intergenic | 30.0% | |
| GAAAAAGATGCAAAGACAAT+GGG | - | chr3_2:81530048-81530067 | None:intergenic | 30.0% | |
| AGAAAAAGATGCAAAGACAA+TGG | - | chr3_2:81530049-81530068 | None:intergenic | 30.0% | |
| ! | ATTGTCTTTGCATCTTTTTC+TGG | + | chr3_2:81530048-81530067 | Msa0429950:CDS | 30.0% |
| TGCAAAAGCTTGTATGTTAA+AGG | + | chr3_2:81530074-81530093 | Msa0429950:CDS | 30.0% | |
| TTGTATGTTAAAGGTTCTTC+AGG | + | chr3_2:81530083-81530102 | Msa0429950:CDS | 30.0% | |
| TTTCCTTTGTTCCAGATAAT+TGG | + | chr3_2:81530196-81530215 | Msa0429950:intron | 30.0% | |
| TCATGTTTATATGTGAAACG+AGG | + | chr3_2:81530359-81530378 | Msa0429950:intron | 30.0% | |
| TGGCTTATAACTAGAAAAAC+CGG | - | chr3_2:81530543-81530562 | None:intergenic | 30.0% | |
| !!! | TTTTTCTAGTTATAAGCCAG+CGG | + | chr3_2:81530544-81530563 | Msa0429950:intron | 30.0% |
| !!! | TTTTTTTGTGAACAGGAACT+TGG | - | chr3_2:81530656-81530675 | None:intergenic | 30.0% |
| ! | CTTAATTTTTGTCATTGCAC+AGG | + | chr3_2:81530722-81530741 | Msa0429950:intron | 30.0% |
| AAATACAGTCTTTAACAAGC+TGG | - | chr3_2:81530755-81530774 | None:intergenic | 30.0% | |
| CTTGTTAAAGACTGTATTTC+TGG | + | chr3_2:81530756-81530775 | Msa0429950:CDS | 30.0% | |
| TTCAAATCTGTTGAGGAAAA+GGG | - | chr3_2:81530922-81530941 | None:intergenic | 30.0% | |
| ATTCAAATCTGTTGAGGAAA+AGG | - | chr3_2:81530923-81530942 | None:intergenic | 30.0% | |
| AAGATACCTCAAAAAAATGG+AGG | - | chr3_2:81531034-81531053 | None:intergenic | 30.0% | |
| GTCAAGATACCTCAAAAAAA+TGG | - | chr3_2:81531037-81531056 | None:intergenic | 30.0% | |
| TCTTGACATATCTGCTTATT+AGG | + | chr3_2:81531050-81531069 | Msa0429950:intron | 30.0% | |
| CTGAACAAAAAATGAGATAC+GGG | - | chr3_2:81531103-81531122 | None:intergenic | 30.0% | |
| !!! | TTCGTTTATGCTAGTTTTCT+TGG | + | chr3_2:81531346-81531365 | Msa0429950:intron | 30.0% |
| ATGATTCGTTGTGCAAAAAT+TGG | + | chr3_2:81531374-81531393 | Msa0429950:intron | 30.0% | |
| TTCGTTCATTACAATTTCCA+TGG | - | chr3_2:81531407-81531426 | None:intergenic | 30.0% | |
| ATAGCAGTTTCATATTCATC+CGG | - | chr3_2:81531511-81531530 | None:intergenic | 30.0% | |
| !!! | CTTCAAATCTTCTGTTTTTG+TGG | - | chr3_2:81531570-81531589 | None:intergenic | 30.0% |
| TATCACGATGATAAAGATGT+TGG | + | chr3_2:81531730-81531749 | Msa0429950:CDS | 30.0% | |
| AAAAATGCAGGACTATTATC+TGG | + | chr3_2:81531895-81531914 | Msa0429950:CDS | 30.0% | |
| ATACAAGTTTGAATCTGATG+TGG | + | chr3_2:81531993-81532012 | Msa0429950:three_prime_UTR | 30.0% | |
| AATTAAAAAGACAGCTGAGA+GGG | - | chr3_2:81532056-81532075 | None:intergenic | 30.0% | |
| TAATTAAAAAGACAGCTGAG+AGG | - | chr3_2:81532057-81532076 | None:intergenic | 30.0% | |
| ! | GAGTTTCAATCTTGTTGTGA+TGG | + | chr3_2:81527720-81527739 | Msa0429950:five_prime_UTR | 35.0% |
| GAAAAAGAAGGAAAATGTGG+GGG | + | chr3_2:81528026-81528045 | Msa0429950:exon | 35.0% | |
| !! | GGTTTGGTGGTAGATATTAT+TGG | + | chr3_2:81528047-81528066 | Msa0429950:CDS | 35.0% |
| TAGATTGTGAGAAAGCGAAT+GGG | + | chr3_2:81528083-81528102 | Msa0429950:CDS | 35.0% | |
| GTAGTTGTAAATGCCTGATA+AGG | + | chr3_2:81528265-81528284 | Msa0429950:intron | 35.0% | |
| AGCAAAAGAGAATTGGTGAA+TGG | + | chr3_2:81528469-81528488 | Msa0429950:intron | 35.0% | |
| ACTCGTATGTCTATTAGTAC+TGG | + | chr3_2:81528508-81528527 | Msa0429950:intron | 35.0% | |
| ! | TCTATTAGTACTGGACATTG+TGG | + | chr3_2:81528517-81528536 | Msa0429950:intron | 35.0% |
| AAGATTGAAGCCTGATTACA+AGG | + | chr3_2:81528556-81528575 | Msa0429950:intron | 35.0% | |
| ACAGTATAGAGACTATACTG+TGG | + | chr3_2:81528810-81528829 | Msa0429950:intron | 35.0% | |
| TTACACATCTCACTGTATAC+CGG | + | chr3_2:81528837-81528856 | Msa0429950:intron | 35.0% | |
| CTAAGCCTTACCTTAAAACA+GGG | + | chr3_2:81528891-81528910 | Msa0429950:intron | 35.0% | |
| ! | AATAAGCCAACCCTGTTTTA+AGG | - | chr3_2:81528904-81528923 | None:intergenic | 35.0% |
| GCAAGGTCTTACTATAAAGA+AGG | - | chr3_2:81529005-81529024 | None:intergenic | 35.0% | |
| TAACTAAATAAGCTAGGCCA+AGG | - | chr3_2:81529246-81529265 | None:intergenic | 35.0% | |
| GTATTATTCCTTACTTGCCT+CGG | - | chr3_2:81529274-81529293 | None:intergenic | 35.0% | |
| AGTTCAATATCCATAGGGAT+GGG | - | chr3_2:81529342-81529361 | None:intergenic | 35.0% | |
| AAGTTCAATATCCATAGGGA+TGG | - | chr3_2:81529343-81529362 | None:intergenic | 35.0% | |
| !! | CAAGAATTGTGGCTTTATCA+GGG | - | chr3_2:81529392-81529411 | None:intergenic | 35.0% |
| TGACTGATCTACAAAATGGA+AGG | - | chr3_2:81529461-81529480 | None:intergenic | 35.0% | |
| AGACTGACTGATCTACAAAA+TGG | - | chr3_2:81529465-81529484 | None:intergenic | 35.0% | |
| ! | ATTTTCCTTGCATGCTAAAG+TGG | + | chr3_2:81529509-81529528 | Msa0429950:intron | 35.0% |
| TCAGTGTTCTACAGTTTCTA+CGG | + | chr3_2:81529862-81529881 | Msa0429950:intron | 35.0% | |
| ! | CTGCTATTTGTTCAATATGC+AGG | + | chr3_2:81530002-81530021 | Msa0429950:intron | 35.0% |
| !! | ATATGCAGGTGCTGAAAATT+AGG | + | chr3_2:81530016-81530035 | Msa0429950:intron | 35.0% |
| CTTTGTTCCAGATAATTGGT+GGG | + | chr3_2:81530200-81530219 | Msa0429950:intron | 35.0% | |
| TTTGTTCCAGATAATTGGTG+GGG | + | chr3_2:81530201-81530220 | Msa0429950:intron | 35.0% | |
| GGAGTGTGAAACACATAATA+TGG | + | chr3_2:81530222-81530241 | Msa0429950:CDS | 35.0% | |
| GGCCTTTAGCAATTTATTTG+AGG | + | chr3_2:81530254-81530273 | Msa0429950:intron | 35.0% | |
| TAAATGACCAAAAAACCCAG+CGG | + | chr3_2:81530504-81530523 | Msa0429950:intron | 35.0% | |
| AAATACTAAAATACCCCCAG+CGG | - | chr3_2:81530580-81530599 | None:intergenic | 35.0% | |
| ACTAGTAAAATCAACTGGAC+AGG | - | chr3_2:81530796-81530815 | None:intergenic | 35.0% | |
| GTGACACTTTCAAAACAGAT+GGG | - | chr3_2:81530845-81530864 | None:intergenic | 35.0% | |
| TGTGACACTTTCAAAACAGA+TGG | - | chr3_2:81530846-81530865 | None:intergenic | 35.0% | |
| AAATTACGGCACGAGTTATT+AGG | - | chr3_2:81531295-81531314 | None:intergenic | 35.0% | |
| !!! | CAAATCTTCTGTTTTTGTGG+CGG | - | chr3_2:81531567-81531586 | None:intergenic | 35.0% |
| AAGATTTGAAGACGAGATAC+TGG | + | chr3_2:81531579-81531598 | Msa0429950:CDS | 35.0% | |
| AGATTTGAAGACGAGATACT+GGG | + | chr3_2:81531580-81531599 | Msa0429950:CDS | 35.0% | |
| GAATTTGTCTCCTAGTTCAA+TGG | + | chr3_2:81531705-81531724 | Msa0429950:CDS | 35.0% | |
| AGGTCGAATTCAAAAAATGC+AGG | + | chr3_2:81531883-81531902 | Msa0429950:CDS | 35.0% | |
| TGTACAATTCAAGCAGGAAA+TGG | - | chr3_2:81532105-81532124 | None:intergenic | 35.0% | |
| AGTAACTGTACAATTCAAGC+AGG | - | chr3_2:81532111-81532130 | None:intergenic | 35.0% | |
| CGTATAGGGTTGAAGAATTG+AGG | - | chr3_2:81527923-81527942 | None:intergenic | 40.0% | |
| GTAGATTGTGAGAAAGCGAA+TGG | + | chr3_2:81528082-81528101 | Msa0429950:CDS | 40.0% | |
| ATCTCTACTCTTCTCTTGGT+TGG | + | chr3_2:81528164-81528183 | Msa0429950:CDS | 40.0% | |
| ! | TGCCTGATAAGGGTTGATTT+AGG | + | chr3_2:81528276-81528295 | Msa0429950:intron | 40.0% |
| CACCTAAATCAACCCTTATC+AGG | - | chr3_2:81528281-81528300 | None:intergenic | 40.0% | |
| ! | CTGATAAGGGTTGATTTAGG+TGG | + | chr3_2:81528279-81528298 | Msa0429950:intron | 40.0% |
| ! | TAAGGGTTGATTTAGGTGGA+TGG | + | chr3_2:81528283-81528302 | Msa0429950:intron | 40.0% |
| TACTGGACATTGTGGTTTAC+TGG | + | chr3_2:81528525-81528544 | Msa0429950:intron | 40.0% | |
| ACTGGACATTGTGGTTTACT+GGG | + | chr3_2:81528526-81528545 | Msa0429950:intron | 40.0% | |
| CTAATATGCGGTGGTTTCTT+CGG | - | chr3_2:81528622-81528641 | None:intergenic | 40.0% | |
| TTCATGAAGCTAATATGCGG+TGG | - | chr3_2:81528631-81528650 | None:intergenic | 40.0% | |
| CAGTTGTGCCTTTGCTTTAT+AGG | + | chr3_2:81528672-81528691 | Msa0429950:intron | 40.0% | |
| !! | TTGGTAATGGAAAATGCCTC+TGG | - | chr3_2:81528743-81528762 | None:intergenic | 40.0% |
| ! | CATCGAGTTGCAATTGGTAA+TGG | - | chr3_2:81528756-81528775 | None:intergenic | 40.0% |
| ! | AACAGACATCGAGTTGCAAT+TGG | - | chr3_2:81528762-81528781 | None:intergenic | 40.0% |
| CACTGTATACCGGATGATTA+CGG | + | chr3_2:81528847-81528866 | Msa0429950:intron | 40.0% | |
| ACTGTATACCGGATGATTAC+GGG | + | chr3_2:81528848-81528867 | Msa0429950:intron | 40.0% | |
| GCTAAGCCTTACCTTAAAAC+AGG | + | chr3_2:81528890-81528909 | Msa0429950:intron | 40.0% | |
| ACCTTGCCTATCTCCAAATA+GGG | + | chr3_2:81529018-81529037 | Msa0429950:intron | 40.0% | |
| CTAATGCCCTATTTGGAGAT+AGG | - | chr3_2:81529027-81529046 | None:intergenic | 40.0% | |
| ! | CTATCTCCAAATAGGGCATT+AGG | + | chr3_2:81529025-81529044 | Msa0429950:intron | 40.0% |
| TTAATAAGCCGAGGCAAGTA+AGG | + | chr3_2:81529263-81529282 | Msa0429950:intron | 40.0% | |
| !! | GCAAGAATTGTGGCTTTATC+AGG | - | chr3_2:81529393-81529412 | None:intergenic | 40.0% |
| CAGTCAGTCTGAATTCAAGT+CGG | + | chr3_2:81529475-81529494 | Msa0429950:intron | 40.0% | |
| ATAGACCACTTTAGCATGCA+AGG | - | chr3_2:81529517-81529536 | None:intergenic | 40.0% | |
| AGAGCATAGTTAGTACAGCT+AGG | + | chr3_2:81529663-81529682 | Msa0429950:intron | 40.0% | |
| TATAGTAGTTGTGCTTGTGC+AGG | - | chr3_2:81529769-81529788 | None:intergenic | 40.0% | |
| ! | GTCTTTGCATCTTTTTCTGG+TGG | + | chr3_2:81530051-81530070 | Msa0429950:CDS | 40.0% |
| CCAGAATTAAGAGCTCTTAC+AGG | - | chr3_2:81530163-81530182 | None:intergenic | 40.0% | |
| CCTGTAAGAGCTCTTAATTC+TGG | + | chr3_2:81530160-81530179 | Msa0429950:intron | 40.0% | |
| ! | CCACCAATTATCTGGAACAA+AGG | - | chr3_2:81530202-81530221 | None:intergenic | 40.0% |
| CCTTTGTTCCAGATAATTGG+TGG | + | chr3_2:81530199-81530218 | Msa0429950:intron | 40.0% | |
| ! | ATCCACCAAGATTTGCTTCA+TGG | + | chr3_2:81530865-81530884 | Msa0429950:CDS | 40.0% |
| ATCCATGAAGCAAATCTTGG+TGG | - | chr3_2:81530870-81530889 | None:intergenic | 40.0% | |
| GCAATCCATGAAGCAAATCT+TGG | - | chr3_2:81530873-81530892 | None:intergenic | 40.0% | |
| ! | TTTGCTTCATGGATTGCCAA+TGG | + | chr3_2:81530876-81530895 | Msa0429950:CDS | 40.0% |
| GTATTCTTAGCTGCTTACAG+TGG | - | chr3_2:81530982-81531001 | None:intergenic | 40.0% | |
| ! | CTTTTTGTTGCAGAGTATGC+AGG | + | chr3_2:81531076-81531095 | Msa0429950:intron | 40.0% |
| ! | TTCCATCGACTAAAAGACCT+TGG | + | chr3_2:81531164-81531183 | Msa0429950:CDS | 40.0% |
| GAGATGTCAAACTGGTAAAG+TGG | + | chr3_2:81531189-81531208 | Msa0429950:CDS | 40.0% | |
| TCAAGATACTGACCTACATG+AGG | - | chr3_2:81531224-81531243 | None:intergenic | 40.0% | |
| AGTGCACGGATGAGATAATA+AGG | + | chr3_2:81531259-81531278 | Msa0429950:intron | 40.0% | |
| CAAAAATTGGTGTGCAACCA+TGG | + | chr3_2:81531387-81531406 | Msa0429950:intron | 40.0% | |
| TTTATGGCATGCATGTACAG+AGG | + | chr3_2:81531434-81531453 | Msa0429950:intron | 40.0% | |
| !! | AGGTCATTTTCGTCATCATC+CGG | + | chr3_2:81531489-81531508 | Msa0429950:intron | 40.0% |
| ! | AACAACCTCAACTAGTTTCC+AGG | + | chr3_2:81531660-81531679 | Msa0429950:CDS | 40.0% |
| ! | ACAACCTCAACTAGTTTCCA+GGG | + | chr3_2:81531661-81531680 | Msa0429950:CDS | 40.0% |
| AAAACCCTGGAAACTAGTTG+AGG | - | chr3_2:81531668-81531687 | None:intergenic | 40.0% | |
| CTAGGAGACAAATTCTCACT+CGG | - | chr3_2:81531700-81531719 | None:intergenic | 40.0% | |
| TCGTGATACTCCATTGAACT+AGG | - | chr3_2:81531718-81531737 | None:intergenic | 40.0% | |
| TCTGTAGCAGATGAACGAAA+AGG | + | chr3_2:81531754-81531773 | Msa0429950:CDS | 40.0% | |
| CAGGACTATTATCTGGTACA+AGG | + | chr3_2:81531902-81531921 | Msa0429950:CDS | 40.0% | |
| GACTATTATCTGGTACAAGG+AGG | + | chr3_2:81531905-81531924 | Msa0429950:CDS | 40.0% | |
| AATGTTACAACCTTGAGCGT+CGG | - | chr3_2:81531960-81531979 | None:intergenic | 40.0% | |
| GTGGTAGAACCTGAAATAAG+AGG | + | chr3_2:81532012-81532031 | Msa0429950:three_prime_UTR | 40.0% | |
| GAGGGAATTTACAAGTCGTT+CGG | - | chr3_2:81532038-81532057 | None:intergenic | 40.0% | |
| GAGTAATGTGATTGAGAAGC+TGG | + | chr3_2:81532079-81532098 | Msa0429950:three_prime_UTR | 40.0% | |
| ! | GTTAAGGAAGCACGAAAACG+AGG | - | chr3_2:81527837-81527856 | None:intergenic | 45.0% |
| AGAAGGAAAATGTGGGGGTT+TGG | + | chr3_2:81528031-81528050 | Msa0429950:exon | 45.0% | |
| GAAAGCGAATGGGATAGTTG+TGG | + | chr3_2:81528093-81528112 | Msa0429950:CDS | 45.0% | |
| GGATAGTTGTGGTGTTTGCA+TGG | + | chr3_2:81528104-81528123 | Msa0429950:CDS | 45.0% | |
| GTTTGCATGGATGTCAAGTG+AGG | + | chr3_2:81528117-81528136 | Msa0429950:CDS | 45.0% | |
| GTGGATCTCTACTCTTCTCT+TGG | + | chr3_2:81528160-81528179 | Msa0429950:CDS | 45.0% | |
| TTGAAGCCTGATTACAAGGC+AGG | + | chr3_2:81528560-81528579 | Msa0429950:intron | 45.0% | |
| TGAAGCCTGATTACAAGGCA+GGG | + | chr3_2:81528561-81528580 | Msa0429950:intron | 45.0% | |
| ! | GTAATGGAAAATGCCTCTGG+TGG | - | chr3_2:81528740-81528759 | None:intergenic | 45.0% |
| CATTTCCACCCGTAATCATC+CGG | - | chr3_2:81528859-81528878 | None:intergenic | 45.0% | |
| GCCTTACCTTAAAACAGGGT+TGG | + | chr3_2:81528895-81528914 | Msa0429950:intron | 45.0% | |
| !!! | GCCAACCCTGTTTTAAGGTA+AGG | - | chr3_2:81528899-81528918 | None:intergenic | 45.0% |
| GACCTTGCCTATCTCCAAAT+AGG | + | chr3_2:81529017-81529036 | Msa0429950:intron | 45.0% | |
| CATAGGCCTAATGCCCTATT+TGG | - | chr3_2:81529034-81529053 | None:intergenic | 45.0% | |
| TAAGAGCTCTTACAGGCCAA+TGG | - | chr3_2:81530156-81530175 | None:intergenic | 45.0% | |
| TGAAGCATGGATGGCAAGTT+GGG | - | chr3_2:81530401-81530420 | None:intergenic | 45.0% | |
| ATGAAGCATGGATGGCAAGT+TGG | - | chr3_2:81530402-81530421 | None:intergenic | 45.0% | |
| !!! | TTAACTGCCGCTGGGTTTTT+TGG | - | chr3_2:81530514-81530533 | None:intergenic | 45.0% |
| ATTGCCAATGGCATAGCATC+TGG | + | chr3_2:81530888-81530907 | Msa0429950:CDS | 45.0% | |
| AAGACCAGATGCTATGCCAT+TGG | - | chr3_2:81530895-81530914 | None:intergenic | 45.0% | |
| GCTGCGATTCAAATCTGTTG+AGG | - | chr3_2:81530929-81530948 | None:intergenic | 45.0% | |
| TTCTTAGCTGCTTACAGTGG+TGG | - | chr3_2:81530979-81530998 | None:intergenic | 45.0% | |
| ! | CATCGACTAAAAGACCTTGG+CGG | + | chr3_2:81531167-81531186 | Msa0429950:CDS | 45.0% |
| ATACTGACCTACATGAGGAG+AGG | - | chr3_2:81531219-81531238 | None:intergenic | 45.0% | |
| ACTGCTATCACCGAAATCCT+TGG | + | chr3_2:81531523-81531542 | Msa0429950:CDS | 45.0% | |
| TATCACCGAAATCCTTGGCA+AGG | + | chr3_2:81531528-81531547 | Msa0429950:CDS | 45.0% | |
| AACTGCCTTGCCAAGGATTT+CGG | - | chr3_2:81531536-81531555 | None:intergenic | 45.0% | |
| AAATTGCAACTGCCTTGCCA+AGG | - | chr3_2:81531543-81531562 | None:intergenic | 45.0% | |
| ATCAACGCAAATGGGGTTCT+TGG | + | chr3_2:81531808-81531827 | Msa0429950:CDS | 45.0% | |
| !!! | GAGCGTCGGATGCATTTTAT+AGG | - | chr3_2:81531946-81531965 | None:intergenic | 45.0% |
| TAAAATGCATCCGACGCTCA+AGG | + | chr3_2:81531947-81531966 | Msa0429950:CDS | 45.0% | |
| GTGACTGATATCACTGTGAC+AGG | + | chr3_2:81532160-81532179 | Msa0429950:three_prime_UTR | 45.0% | |
| ! | AGGAAGCACGAAAACGAGGT+TGG | - | chr3_2:81527833-81527852 | None:intergenic | 50.0% |
| AGGAAAATGTGGGGGTTTGG+TGG | + | chr3_2:81528034-81528053 | Msa0429950:exon | 50.0% | |
| GAAGCCTGATTACAAGGCAG+GGG | + | chr3_2:81528562-81528581 | Msa0429950:intron | 50.0% | |
| CTGATTACAAGGCAGGGGAT+GGG | + | chr3_2:81528567-81528586 | Msa0429950:intron | 50.0% | |
| CTGGTTGAAATAGCCACCAG+AGG | + | chr3_2:81528724-81528743 | Msa0429950:intron | 50.0% | |
| GTATACCGGATGATTACGGG+TGG | + | chr3_2:81528851-81528870 | Msa0429950:intron | 50.0% | |
| AGGTAAGGCTTAGCCTAACG+TGG | - | chr3_2:81528884-81528903 | None:intergenic | 50.0% | |
| GCCCTATTTGGAGATAGGCA+AGG | - | chr3_2:81529022-81529041 | None:intergenic | 50.0% | |
| AATGAGCCAAGTGGCTCACT+GGG | - | chr3_2:81529319-81529338 | None:intergenic | 50.0% | |
| TTGGCTCATTCCCATCCCTA+TGG | + | chr3_2:81529329-81529348 | Msa0429950:intron | 50.0% | |
| CACACTCCCCACCAATTATC+TGG | - | chr3_2:81530210-81530229 | None:intergenic | 50.0% | |
| GAAGCATGGATGGCAAGTTG+GGG | - | chr3_2:81530400-81530419 | None:intergenic | 50.0% | |
| AGCGGTAGTTAACTACCGCT+GGG | + | chr3_2:81530562-81530581 | Msa0429950:intron | 50.0% | |
| AATCGCAGCGTGCAGAGTAT+TGG | + | chr3_2:81530940-81530959 | Msa0429950:CDS | 50.0% | |
| ! | CGCCAAGGTCTTTTAGTCGA+TGG | - | chr3_2:81531169-81531188 | None:intergenic | 50.0% |
| TGGAGTTCCTCTCCTCATGT+AGG | + | chr3_2:81531209-81531228 | Msa0429950:CDS | 50.0% | |
| AGACGAGATACTGGGCATAG+AGG | + | chr3_2:81531588-81531607 | Msa0429950:CDS | 50.0% | |
| GACGAGATACTGGGCATAGA+GGG | + | chr3_2:81531589-81531608 | Msa0429950:CDS | 50.0% | |
| CTGATCCTTTCTCTGAGCTG+AGG | + | chr3_2:81531629-81531648 | Msa0429950:CDS | 50.0% | |
| GCTTTCCTCAGCTCAGAGAA+AGG | - | chr3_2:81531637-81531656 | None:intergenic | 50.0% | |
| ! | ATTTGCGTTGATGCTCGGAC+GGG | - | chr3_2:81531800-81531819 | None:intergenic | 50.0% |
| ! | CATTTGCGTTGATGCTCGGA+CGG | - | chr3_2:81531801-81531820 | None:intergenic | 50.0% |
| GTCCGAGCATCAACGCAAAT+GGG | + | chr3_2:81531800-81531819 | Msa0429950:CDS | 50.0% | |
| TCCGAGCATCAACGCAAATG+GGG | + | chr3_2:81531801-81531820 | Msa0429950:CDS | 50.0% | |
| ! | ACCCCATTTGCGTTGATGCT+CGG | - | chr3_2:81531805-81531824 | None:intergenic | 50.0% |
| TCCCAATCCTCGACTGTCTT+GGG | - | chr3_2:81531859-81531878 | None:intergenic | 50.0% | |
| ATCCCAATCCTCGACTGTCT+TGG | - | chr3_2:81531860-81531879 | None:intergenic | 50.0% | |
| ! | GTCGTTCGGCCTCTTATTTC+AGG | - | chr3_2:81532024-81532043 | None:intergenic | 50.0% |
| CCATCCCCTGCCTTGTAATC+AGG | - | chr3_2:81528569-81528588 | None:intergenic | 55.0% | |
| CCTGATTACAAGGCAGGGGA+TGG | + | chr3_2:81528566-81528585 | Msa0429950:intron | 55.0% | |
| GGGTGGAAATGAGCCACGTT+AGG | + | chr3_2:81528868-81528887 | Msa0429950:intron | 55.0% | |
| ATGAGCCAAGTGGCTCACTG+GGG | - | chr3_2:81529318-81529337 | None:intergenic | 55.0% | |
| GAATGAGCCAAGTGGCTCAC+TGG | - | chr3_2:81529320-81529339 | None:intergenic | 55.0% | |
| AGGGATGGGAATGAGCCAAG+TGG | - | chr3_2:81529328-81529347 | None:intergenic | 55.0% | |
| CAGCGGTAGTTAACTACCGC+TGG | - | chr3_2:81530561-81530580 | None:intergenic | 55.0% | |
| CAGCGGTAGTTAACTACCGC+TGG | + | chr3_2:81530561-81530580 | Msa0429950:intron | 55.0% | |
| GCGGTAGTTAACTACCGCTG+GGG | + | chr3_2:81530563-81530582 | Msa0429950:intron | 55.0% | |
| CGGTAGTTAACTACCGCTGG+GGG | + | chr3_2:81530564-81530583 | Msa0429950:intron | 55.0% | |
| CCAGTTTGACATCTCCGCCA+AGG | - | chr3_2:81531184-81531203 | None:intergenic | 55.0% | |
| CCTTGGCGGAGATGTCAAAC+TGG | + | chr3_2:81531181-81531200 | Msa0429950:CDS | 55.0% | |
| TCGGAGCAACAGCAAAACCC+TGG | - | chr3_2:81531681-81531700 | None:intergenic | 55.0% | |
| CGTCCGAGCATCAACGCAAA+TGG | + | chr3_2:81531799-81531818 | Msa0429950:CDS | 55.0% | |
| TTGTGTCCCCAAGACAGTCG+AGG | + | chr3_2:81531849-81531868 | Msa0429950:CDS | 55.0% | |
| TCCCCAAGACAGTCGAGGAT+TGG | + | chr3_2:81531854-81531873 | Msa0429950:CDS | 55.0% | |
| CCCAATCCTCGACTGTCTTG+GGG | - | chr3_2:81531858-81531877 | None:intergenic | 55.0% | |
| CCCCAAGACAGTCGAGGATT+GGG | + | chr3_2:81531855-81531874 | Msa0429950:CDS | 55.0% | |
| CAGTCGAGGATTGGGATGTC+AGG | + | chr3_2:81531863-81531882 | Msa0429950:CDS | 55.0% | |
| CATAGCCCCAGTGAGCCACT+TGG | + | chr3_2:81529310-81529329 | Msa0429950:intron | 60.0% | |
| GGCAGCAGTTAACTGCCGCT+GGG | - | chr3_2:81530522-81530541 | None:intergenic | 60.0% | |
| CAGCGGCAGTTAACTGCTGC+CGG | + | chr3_2:81530521-81530540 | Msa0429950:intron | 60.0% | |
| ! | GCAGGGGATGGGTTCCATCC+AGG | + | chr3_2:81528578-81528597 | Msa0429950:intron | 65.0% |
| GGGTGACTCGTCGATCCCGA+AGG | + | chr3_2:81529165-81529184 | Msa0429950:intron | 65.0% | |
| CGGCAGCAGTTAACTGCCGC+TGG | - | chr3_2:81530523-81530542 | None:intergenic | 65.0% | |
| ! | GCGTTGATGCTCGGACGGGT+GGG | - | chr3_2:81531796-81531815 | None:intergenic | 65.0% |
| ! | TGCGTTGATGCTCGGACGGG+TGG | - | chr3_2:81531797-81531816 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 81527680 | 81532243 | 81527680 | ID=Msa0429950;Name=Msa0429950 |
| chr3_2 | mRNA | 81527680 | 81532243 | 81527680 | ID=Msa0429950-mRNA-1;Parent=Msa0429950;Name=Msa0429950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=360|1|1|1|1|1|7|268|406 |
| chr3_2 | exon | 81527680 | 81528221 | 81527680 | ID=Msa0429950-mRNA-1:exon:22507;Parent=Msa0429950-mRNA-1 |
| chr3_2 | exon | 81529383 | 81529440 | 81529383 | ID=Msa0429950-mRNA-1:exon:22508;Parent=Msa0429950-mRNA-1 |
| chr3_2 | exon | 81530024 | 81530104 | 81530024 | ID=Msa0429950-mRNA-1:exon:22509;Parent=Msa0429950-mRNA-1 |
| chr3_2 | exon | 81530211 | 81530243 | 81530211 | ID=Msa0429950-mRNA-1:exon:22510;Parent=Msa0429950-mRNA-1 |
| chr3_2 | exon | 81530744 | 81530983 | 81530744 | ID=Msa0429950-mRNA-1:exon:22511;Parent=Msa0429950-mRNA-1 |
| chr3_2 | exon | 81531089 | 81531230 | 81531089 | ID=Msa0429950-mRNA-1:exon:22512;Parent=Msa0429950-mRNA-1 |
| chr3_2 | exon | 81531491 | 81532243 | 81531491 | ID=Msa0429950-mRNA-1:exon:22513;Parent=Msa0429950-mRNA-1 |
| chr3_2 | five_prime_UTR | 81527680 | 81528039 | 81527680 | ID=Msa0429950-mRNA-1:five_prime_utr;Parent=Msa0429950-mRNA-1 |
| chr3_2 | CDS | 81528040 | 81528221 | 81528040 | ID=Msa0429950-mRNA-1:cds;Parent=Msa0429950-mRNA-1 |
| chr3_2 | CDS | 81529383 | 81529440 | 81529383 | ID=Msa0429950-mRNA-1:cds;Parent=Msa0429950-mRNA-1 |
| chr3_2 | CDS | 81530024 | 81530104 | 81530024 | ID=Msa0429950-mRNA-1:cds;Parent=Msa0429950-mRNA-1 |
| chr3_2 | CDS | 81530211 | 81530243 | 81530211 | ID=Msa0429950-mRNA-1:cds;Parent=Msa0429950-mRNA-1 |
| chr3_2 | CDS | 81530744 | 81530983 | 81530744 | ID=Msa0429950-mRNA-1:cds;Parent=Msa0429950-mRNA-1 |
| chr3_2 | CDS | 81531089 | 81531230 | 81531089 | ID=Msa0429950-mRNA-1:cds;Parent=Msa0429950-mRNA-1 |
| chr3_2 | CDS | 81531491 | 81531975 | 81531491 | ID=Msa0429950-mRNA-1:cds;Parent=Msa0429950-mRNA-1 |
| chr3_2 | three_prime_UTR | 81531976 | 81532243 | 81531976 | ID=Msa0429950-mRNA-1:three_prime_utr;Parent=Msa0429950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
