Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00106.t1 | XP_003594658.2 | 97.6 | 1006 | 24 | 0 | 1 | 1006 | 1 | 1006 | 0.00E+00 | 1961.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00106.t1 | Q8RWB8 | 67.4 | 1011 | 323 | 4 | 1 | 1005 | 1 | 1010 | 0.0e+00 | 1365.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00106.t1 | G7IL24 | 97.6 | 1006 | 24 | 0 | 1 | 1006 | 1 | 1006 | 0.0e+00 | 1961.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene00106 | MS.gene048780 | PPI |
MS.gene050376 | MS.gene00106 | PPI |
MS.gene00106 | MS.gene015570 | PPI |
MS.gene00106 | MS.gene048777 | PPI |
MS.gene00106 | MS.gene072801 | PPI |
MS.gene00106 | MS.gene030426 | PPI |
MS.gene00106 | MS.gene72170 | PPI |
MS.gene00106 | MS.gene036437 | PPI |
MS.gene019289 | MS.gene00106 | PPI |
MS.gene033776 | MS.gene00106 | PPI |
MS.gene00106 | MS.gene070339 | PPI |
MS.gene00106 | MS.gene43975 | PPI |
MS.gene00106 | MS.gene005105 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00106.t1 | MTR_2g033040 | 98.004 | 1002 | 20 | 0 | 1 | 1002 | 1 | 1002 | 0.0 | 2039 |
MS.gene00106.t1 | MTR_2g033055 | 84.103 | 390 | 55 | 2 | 298 | 681 | 1 | 389 | 0.0 | 667 |
MS.gene00106.t1 | MTR_2g033080 | 89.272 | 261 | 27 | 1 | 1 | 260 | 41 | 301 | 1.13e-161 | 480 |
MS.gene00106.t1 | MTR_7g103210 | 34.897 | 533 | 299 | 12 | 498 | 1003 | 616 | 1127 | 1.71e-92 | 319 |
MS.gene00106.t1 | MTR_7g103210 | 34.476 | 496 | 285 | 10 | 498 | 973 | 616 | 1091 | 1.92e-84 | 296 |
MS.gene00106.t1 | MTR_5g066710 | 38.810 | 353 | 195 | 10 | 663 | 1005 | 3294 | 3635 | 3.47e-62 | 232 |
MS.gene00106.t1 | MTR_3g099777 | 39.093 | 353 | 194 | 10 | 663 | 1005 | 3322 | 3663 | 6.54e-62 | 231 |
MS.gene00106.t1 | MTR_4g094705 | 36.667 | 390 | 226 | 11 | 625 | 1006 | 3342 | 3718 | 8.81e-62 | 231 |
MS.gene00106.t1 | MTR_4g094708 | 35.897 | 390 | 229 | 11 | 625 | 1006 | 3363 | 3739 | 6.08e-60 | 225 |
MS.gene00106.t1 | MTR_4g133120 | 28.895 | 353 | 223 | 8 | 662 | 1001 | 519 | 856 | 5.26e-36 | 147 |
MS.gene00106.t1 | MTR_2g025950 | 28.818 | 347 | 221 | 11 | 666 | 1001 | 421 | 752 | 1.63e-30 | 130 |
MS.gene00106.t1 | MTR_1g066940 | 27.752 | 436 | 248 | 13 | 622 | 1001 | 1101 | 1525 | 4.50e-30 | 129 |
MS.gene00106.t1 | MTR_1g066940 | 27.500 | 440 | 252 | 13 | 622 | 1005 | 1101 | 1529 | 5.59e-30 | 129 |
MS.gene00106.t1 | MTR_2g025790 | 28.530 | 347 | 222 | 10 | 666 | 1001 | 470 | 801 | 5.83e-30 | 128 |
MS.gene00106.t1 | MTR_2g025830 | 27.666 | 347 | 225 | 9 | 666 | 1001 | 464 | 795 | 1.18e-28 | 124 |
MS.gene00106.t1 | MTR_2g025810 | 27.378 | 347 | 226 | 10 | 666 | 1001 | 459 | 790 | 7.34e-28 | 121 |
MS.gene00106.t1 | MTR_1g066940 | 26.716 | 408 | 234 | 12 | 622 | 973 | 1101 | 1499 | 6.01e-24 | 109 |
MS.gene00106.t1 | MTR_4g073370 | 24.094 | 469 | 248 | 13 | 624 | 1001 | 1406 | 1857 | 2.87e-21 | 101 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00106.t1 | AT3G17205 | 67.359 | 1011 | 323 | 4 | 1 | 1005 | 1 | 1010 | 0.0 | 1422 |
MS.gene00106.t1 | AT3G17205 | 67.359 | 1011 | 323 | 4 | 1 | 1005 | 1 | 1010 | 0.0 | 1422 |
MS.gene00106.t1 | AT3G17205 | 67.062 | 1011 | 312 | 5 | 1 | 1005 | 1 | 996 | 0.0 | 1412 |
MS.gene00106.t1 | AT3G53090 | 35.577 | 520 | 311 | 9 | 498 | 1004 | 614 | 1122 | 5.93e-97 | 332 |
MS.gene00106.t1 | AT3G53090 | 35.577 | 520 | 311 | 9 | 498 | 1004 | 614 | 1122 | 5.93e-97 | 332 |
MS.gene00106.t1 | AT1G55860 | 36.990 | 392 | 222 | 12 | 625 | 1006 | 3286 | 3662 | 1.14e-60 | 228 |
MS.gene00106.t1 | AT1G70320 | 36.735 | 392 | 223 | 12 | 625 | 1006 | 3263 | 3639 | 9.25e-60 | 225 |
MS.gene00106.t1 | AT5G02880 | 28.070 | 399 | 228 | 10 | 649 | 1006 | 1103 | 1483 | 5.15e-30 | 129 |
MS.gene00106.t1 | AT5G02880 | 28.426 | 394 | 223 | 10 | 649 | 1001 | 1103 | 1478 | 5.76e-30 | 129 |
MS.gene00106.t1 | AT4G12570 | 26.496 | 351 | 234 | 7 | 662 | 1001 | 511 | 848 | 6.18e-26 | 115 |
MS.gene00106.t1 | AT4G38600 | 23.326 | 463 | 258 | 12 | 624 | 1001 | 1414 | 1864 | 1.32e-20 | 99.0 |
MS.gene00106.t1 | AT4G38600 | 23.326 | 463 | 258 | 12 | 624 | 1001 | 1414 | 1864 | 1.32e-20 | 99.0 |
MS.gene00106.t1 | AT4G38600 | 23.110 | 463 | 256 | 13 | 624 | 1001 | 1323 | 1770 | 7.30e-19 | 93.6 |
Find 208 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCATCAGCTATTCCTTTAT+TGG | 0.120171 | 2.1:+59402782 | MS.gene00106:CDS |
CTCTGCTGCACTTCGGATTC+AGG | 0.171175 | 2.1:+59394479 | MS.gene00106:CDS |
CAGAAATTCCTTAATATCTA+TGG | 0.177625 | 2.1:+59398546 | MS.gene00106:CDS |
CCTACCTATGCCTGTCTTCT+TGG | 0.177928 | 2.1:+59406225 | MS.gene00106:CDS |
CTTGGAAATATATTAGAAAT+TGG | 0.202850 | 2.1:+59406243 | MS.gene00106:CDS |
TCCTTACAATTCCTTTCTTA+TGG | 0.227942 | 2.1:+59404838 | MS.gene00106:CDS |
AATAAGGCGTGATCATATTT+TGG | 0.229018 | 2.1:+59410673 | MS.gene00106:CDS |
TCTTTGGAGCATGTGCTTAC+AGG | 0.243740 | 2.1:+59404741 | MS.gene00106:CDS |
GGCTCTTTGGCAGCTACTTT+GGG | 0.248154 | 2.1:+59409477 | MS.gene00106:intron |
ACAGAAGAGGAGCTGCTTCC+AGG | 0.249212 | 2.1:+59414558 | MS.gene00106:CDS |
GTTATATTAAATAATGAATA+TGG | 0.249220 | 2.1:+59414528 | MS.gene00106:CDS |
TTAAATACCTGTCTTAAGTT+TGG | 0.250732 | 2.1:-59404870 | None:intergenic |
CTAGACATCGGTTCAGAATA+AGG | 0.255077 | 2.1:+59410657 | MS.gene00106:CDS |
TGTGCAGTATGGATTATTTA+AGG | 0.259244 | 2.1:+59410952 | MS.gene00106:CDS |
AAATCGTAAACGCGTTGATT+TGG | 0.259511 | 2.1:+59394365 | MS.gene00106:CDS |
AGTAGCTTTGGATAGGAAAT+TGG | 0.261134 | 2.1:+59407906 | MS.gene00106:CDS |
AGTTCTTCCCATAGATATTA+AGG | 0.262325 | 2.1:-59398554 | None:intergenic |
CTTAGACAGATTATTCTTAC+AGG | 0.265862 | 2.1:+59402891 | MS.gene00106:CDS |
TTCCCTCAGCTTCTGATATC+AGG | 0.269864 | 2.1:+59415934 | MS.gene00106:intron |
TGATGGGGACATTTCGGATT+TGG | 0.273079 | 2.1:+59414494 | MS.gene00106:CDS |
TACTGTTTCTGCAGGCTCTT+TGG | 0.284402 | 2.1:+59409464 | MS.gene00106:intron |
GGTAGAAAATTGATCAGATT+TGG | 0.286100 | 2.1:-59406180 | None:intergenic |
ATCATTCCAGATCCAGGATT+TGG | 0.307993 | 2.1:-59412786 | None:intergenic |
AATCGTAAACGCGTTGATTT+GGG | 0.311088 | 2.1:+59394366 | MS.gene00106:CDS |
GTTGAGGAAGCTGGAATAGA+TGG | 0.316682 | 2.1:+59410878 | MS.gene00106:CDS |
TGCCAATGGGCCTGATGATA+TGG | 0.327981 | 2.1:+59408119 | MS.gene00106:CDS |
GCCGTCTGTTGTTCCAATCT+TGG | 0.328015 | 2.1:-59410145 | None:intergenic |
TGTGCATTCAGGAAAGCTTT+TGG | 0.328099 | 2.1:+59398750 | MS.gene00106:intron |
GAAATGTATCGGTTCGTCTT+TGG | 0.330389 | 2.1:+59404725 | MS.gene00106:CDS |
TTTCTGCGTTAAAGAAATAT+AGG | 0.338565 | 2.1:-59398800 | None:intergenic |
AGGCTCTTTGGCAGCTACTT+TGG | 0.339093 | 2.1:+59409476 | MS.gene00106:intron |
ACCTGACTGTTCATTCGATA+TGG | 0.341026 | 2.1:+59406284 | MS.gene00106:CDS |
TGGAATATTCAAAGATTTCA+TGG | 0.343635 | 2.1:+59410904 | MS.gene00106:CDS |
AGCTGTTACTACAGTGTTAC+TGG | 0.345676 | 2.1:+59407142 | MS.gene00106:CDS |
CTGACCTTGTTCCTATGCTT+TGG | 0.346072 | 2.1:+59408235 | MS.gene00106:CDS |
TTTGAATGATTTGCCTTCCT+TGG | 0.355279 | 2.1:+59413378 | MS.gene00106:CDS |
GTTTAACGAGCATGAACTTC+AGG | 0.355730 | 2.1:+59414815 | MS.gene00106:CDS |
GCGTTATGATGGGGACATTT+CGG | 0.355960 | 2.1:+59414488 | MS.gene00106:intron |
TCAAGAAATGAGAACTTTGT+TGG | 0.367691 | 2.1:-59414752 | None:intergenic |
ATAAGATGACGATATAATTC+AGG | 0.368787 | 2.1:-59413403 | None:intergenic |
CTTTATCCAAATCCTGGATC+TGG | 0.369645 | 2.1:+59412780 | MS.gene00106:CDS |
AGTACTATAATTTCCAATAA+AGG | 0.377935 | 2.1:-59402795 | None:intergenic |
TGCTCTCGAGGACCATTACT+TGG | 0.380445 | 2.1:+59417113 | MS.gene00106:CDS |
AACTTCACCTGTCAACATTA+AGG | 0.381553 | 2.1:-59398578 | None:intergenic |
CAGAAGGAAGCGAGTATCTA+TGG | 0.382341 | 2.1:-59407947 | None:intergenic |
CAGTTAGATCTATTCCAGTT+AGG | 0.385711 | 2.1:+59409524 | MS.gene00106:CDS |
CTTGGATGTTGATGATTTGC+GGG | 0.387124 | 2.1:+59415969 | MS.gene00106:CDS |
TAAAACTTCCACCGTATAGA+AGG | 0.393265 | 2.1:+59417483 | MS.gene00106:CDS |
CAGAAAGCTTACACTATGAT+AGG | 0.399654 | 2.1:-59416013 | None:intergenic |
CTCATATCCTTCAGTGATAG+AGG | 0.404205 | 2.1:-59409049 | None:intergenic |
CTGAGAATTCAAGCGATGAT+TGG | 0.404504 | 2.1:-59414637 | None:intergenic |
TCTTCCCTTAGCTCCAAGAT+TGG | 0.404901 | 2.1:+59410132 | MS.gene00106:intron |
CATTTGCTTTATCCAAATCC+TGG | 0.411883 | 2.1:+59412774 | MS.gene00106:CDS |
ATGATGTGATTGAGATGTTC+TGG | 0.412106 | 2.1:+59416951 | MS.gene00106:CDS |
CAGCCGTTGGTGCAGTTTGT+GGG | 0.413650 | 2.1:+59408148 | MS.gene00106:CDS |
TGAAGTCATGGAAGTAGCTT+TGG | 0.413786 | 2.1:+59407894 | MS.gene00106:CDS |
TCAACGCGTTTACGATTTGA+AGG | 0.422395 | 2.1:-59394360 | None:intergenic |
TACTCGCTTCCTTCTGCAAC+TGG | 0.424069 | 2.1:+59407954 | MS.gene00106:CDS |
AGCAACTTATTCAGAAGGAT+TGG | 0.426429 | 2.1:+59414784 | MS.gene00106:CDS |
TGCTTTGGAAATTTATGAAA+CGG | 0.426979 | 2.1:+59408250 | MS.gene00106:CDS |
TTCGTGCAGTACATCATAAT+AGG | 0.427477 | 2.1:+59401205 | MS.gene00106:CDS |
ATCAGGATCACTTGACAGCT+TGG | 0.430417 | 2.1:+59415951 | MS.gene00106:CDS |
TGCAATGAGAAGCTATATCT+TGG | 0.430726 | 2.1:-59404813 | None:intergenic |
AGAACAAAGGCTCAAGATAT+CGG | 0.431066 | 2.1:-59417139 | None:intergenic |
ACAGTCATAATCCTTTCAAT+TGG | 0.435386 | 2.1:-59408198 | None:intergenic |
GCAGCCGTTGGTGCAGTTTG+TGG | 0.435595 | 2.1:+59408147 | MS.gene00106:CDS |
AGTAACAGCTGCAAGGTCTA+TGG | 0.435642 | 2.1:-59407129 | None:intergenic |
GAGCGGTTATCATACCTCTC+AGG | 0.435942 | 2.1:+59408306 | MS.gene00106:CDS |
CAGAAGAGGAGCTGCTTCCA+GGG | 0.448673 | 2.1:+59414559 | MS.gene00106:CDS |
TATGTGCTCTCGTGAACTAC+CGG | 0.450162 | 2.1:+59401157 | MS.gene00106:CDS |
ATTGCTGAGGATGATATTAC+TGG | 0.451128 | 2.1:+59407865 | MS.gene00106:CDS |
TTTGACCATTAGCGTTATGA+TGG | 0.452029 | 2.1:+59414477 | MS.gene00106:intron |
ACTAGAACAAACCTTCTATA+CGG | 0.452817 | 2.1:-59417494 | None:intergenic |
GATAACAATTACCACTCTCT+TGG | 0.461569 | 2.1:-59398878 | None:intergenic |
GTAGTTCGAAAGAAAGAGAT+AGG | 0.465255 | 2.1:+59394394 | MS.gene00106:CDS |
TCATGTATCATTCCAGATCC+AGG | 0.465555 | 2.1:-59412792 | None:intergenic |
CCAGTGATTTCCATGCTGAC+GGG | 0.466493 | 2.1:+59410180 | MS.gene00106:CDS |
CAATCATCGCTTGAATTCTC+AGG | 0.470241 | 2.1:+59414638 | MS.gene00106:CDS |
CGTTAAAGAAATATAGGAAC+TGG | 0.470389 | 2.1:-59398794 | None:intergenic |
TCCACTGTTCTACCTGGGAC+AGG | 0.471143 | 2.1:-59409612 | None:intergenic |
CCAACATTACGTTCATCAAA+TGG | 0.471450 | 2.1:+59406146 | MS.gene00106:CDS |
TGGCGGAGGAAATCAGAATC+TGG | 0.474499 | 2.1:-59398774 | None:intergenic |
CAAAGTTCTCATTTCTTGAG+AGG | 0.476177 | 2.1:+59414756 | MS.gene00106:CDS |
GCTCACCAGAAATCAGTTGA+AGG | 0.476689 | 2.1:+59402728 | MS.gene00106:intron |
CCCAGTGATTTCCATGCTGA+CGG | 0.480324 | 2.1:+59410179 | MS.gene00106:CDS |
CCATGGAGCTGTATGATAGT+AGG | 0.482104 | 2.1:+59402837 | MS.gene00106:CDS |
TAATATATTTCCAAGAAGAC+AGG | 0.485040 | 2.1:-59406235 | None:intergenic |
TCTTGATACCATTTACAAGC+AGG | 0.486257 | 2.1:+59410357 | MS.gene00106:CDS |
GCTTACACTATGATAGGTTC+CGG | 0.488295 | 2.1:-59416007 | None:intergenic |
AATTCATCTGATATATCCTT+AGG | 0.489791 | 2.1:-59406201 | None:intergenic |
GGACAAACTTTAGAAGCAAT+CGG | 0.490398 | 2.1:-59398857 | None:intergenic |
GAGATATTTCATCTGCCAAT+GGG | 0.491308 | 2.1:+59408106 | MS.gene00106:CDS |
TCTCAGGGGATGCCCCTGGT+TGG | 0.493864 | 2.1:+59408322 | MS.gene00106:CDS |
GCCATAAGAAAGGAATTGTA+AGG | 0.494443 | 2.1:-59404839 | None:intergenic |
TCTTCTTGAACAAACGCGAT+TGG | 0.494752 | 2.1:+59394422 | MS.gene00106:CDS |
GCTGATGCATTAGACTCCTT+CGG | 0.495586 | 2.1:-59402768 | None:intergenic |
CCCGTCAGCATGGAAATCAC+TGG | 0.497294 | 2.1:-59410180 | None:intergenic |
GCAAGTGGTAACAGCCAACC+AGG | 0.499899 | 2.1:-59408336 | None:intergenic |
CTCCATATCATCAGGCCCAT+TGG | 0.501041 | 2.1:-59408121 | None:intergenic |
GAATTTGGAGTTGAGGAAGC+TGG | 0.507887 | 2.1:+59410869 | MS.gene00106:CDS |
TTGAACAAACGCGATTGGAA+CGG | 0.508370 | 2.1:+59394427 | MS.gene00106:CDS |
CATTTGCAGGCTATGTTCGA+AGG | 0.508776 | 2.1:+59413022 | MS.gene00106:intron |
TGAACACATTGCCAATTGAA+AGG | 0.508999 | 2.1:+59408187 | MS.gene00106:CDS |
CATCTTTACAGGTTTGTGAC+AGG | 0.510953 | 2.1:+59417089 | MS.gene00106:intron |
GCTTGGATGTTGATGATTTG+CGG | 0.515419 | 2.1:+59415968 | MS.gene00106:CDS |
CAAGAAGAGTACCAAGGAAG+TGG | 0.516651 | 2.1:-59412833 | None:intergenic |
CCATTTGATGAACGTAATGT+TGG | 0.518371 | 2.1:-59406146 | None:intergenic |
TACCTCTCAGGGGATGCCCC+TGG | 0.520542 | 2.1:+59408318 | MS.gene00106:CDS |
CGTCTCTGAGCTCCTGTCCC+AGG | 0.521214 | 2.1:+59409600 | MS.gene00106:CDS |
CCTTGGTACTCTTCTTGCAA+AGG | 0.521413 | 2.1:+59412839 | MS.gene00106:CDS |
AGAAATTCCTTAATATCTAT+GGG | 0.522548 | 2.1:+59398547 | MS.gene00106:CDS |
AGAGATATTTCATCTGCCAA+TGG | 0.523673 | 2.1:+59408105 | MS.gene00106:CDS |
CTAAAGTCTTACTTGTAGAC+AGG | 0.525540 | 2.1:-59408369 | None:intergenic |
GCTGCAACCTCCATATCATC+AGG | 0.526239 | 2.1:-59408129 | None:intergenic |
ACAGATTATTCTTACAGGAA+AGG | 0.527035 | 2.1:+59402896 | MS.gene00106:CDS |
AGCGGTTATCATACCTCTCA+GGG | 0.532391 | 2.1:+59408307 | MS.gene00106:CDS |
TTGACCATTAGCGTTATGAT+GGG | 0.532434 | 2.1:+59414478 | MS.gene00106:intron |
ATTTCAGCAACTTATTCAGA+AGG | 0.532582 | 2.1:+59414779 | MS.gene00106:CDS |
CCGTCAGCATGGAAATCACT+GGG | 0.532917 | 2.1:-59410179 | None:intergenic |
TTCATACAGGTAGCTGCTGT+TGG | 0.535803 | 2.1:-59417455 | None:intergenic |
CTTGATACCATTTACAAGCA+GGG | 0.536532 | 2.1:+59410358 | MS.gene00106:CDS |
GCTTATGATAGTTGATAATG+AGG | 0.536774 | 2.1:+59409006 | MS.gene00106:CDS |
AGTCCTCGAAGATCTTCTTC+TGG | 0.541198 | 2.1:-59410725 | None:intergenic |
AGGAACAAGGTCAGTTCTGT+AGG | 0.542591 | 2.1:-59408226 | None:intergenic |
GAAGCTGGAATAGATGGAGG+TGG | 0.543334 | 2.1:+59410884 | MS.gene00106:CDS |
AACTAGCTGCAGCTAGGCAA+AGG | 0.547662 | 2.1:+59410612 | MS.gene00106:CDS |
CTAAAGTTTGTCCAAGAGAG+TGG | 0.548856 | 2.1:+59398867 | MS.gene00106:CDS |
AGAAGAAGATCTTCGAGGAC+TGG | 0.550380 | 2.1:+59410727 | MS.gene00106:CDS |
GGAAATATATTAGAAATTGG+CGG | 0.551462 | 2.1:+59406246 | MS.gene00106:CDS |
CATTCTCATTTGTGACGCGC+TGG | 0.552687 | 2.1:-59414590 | None:intergenic |
AGAACTGCCTTAATGTTGAC+AGG | 0.553263 | 2.1:+59398571 | MS.gene00106:CDS |
CGGGAGCATACGAATTATGC+CGG | 0.555970 | 2.1:+59415988 | MS.gene00106:CDS |
TACTGGCAATGATGAAGTCA+TGG | 0.557165 | 2.1:+59407882 | MS.gene00106:CDS |
TTCATAAATTTCCAAAGCAT+AGG | 0.557198 | 2.1:-59408246 | None:intergenic |
TCATGGAAGTAGCTTTGGAT+AGG | 0.557242 | 2.1:+59407899 | MS.gene00106:CDS |
TTTGTGACAGGTTGCTCTCG+AGG | 0.558664 | 2.1:+59417101 | MS.gene00106:CDS |
TGTCAATGAATTTGGAGTTG+AGG | 0.560962 | 2.1:+59410862 | MS.gene00106:CDS |
GATGTTCTGGGAAGTACTCA+AGG | 0.562883 | 2.1:+59416964 | MS.gene00106:CDS |
ACCATATCGAATGAACAGTC+AGG | 0.564118 | 2.1:-59406285 | None:intergenic |
AGCGATGATTGGCTACAAGA+TGG | 0.564932 | 2.1:-59414626 | None:intergenic |
TTGCCAGAAGAAGATCTTCG+AGG | 0.565479 | 2.1:+59410722 | MS.gene00106:CDS |
AAACCCACAAACTGCACCAA+CGG | 0.565726 | 2.1:-59408151 | None:intergenic |
GGATATTTCTCTCAAAACAA+TGG | 0.568363 | 2.1:+59402858 | MS.gene00106:CDS |
TATTGAAGCTATTCAACAGA+GGG | 0.570932 | 2.1:+59409567 | MS.gene00106:CDS |
TTCAGATTCTATGATTGCTG+AGG | 0.572860 | 2.1:+59407852 | MS.gene00106:intron |
ATTTCCAAGAAGACAGGCAT+AGG | 0.573882 | 2.1:-59406229 | None:intergenic |
AGAATAATCTGTCTAAGTAG+AGG | 0.574991 | 2.1:-59402885 | None:intergenic |
AGCAGAACTCTGCTGCACTT+CGG | 0.576182 | 2.1:+59394472 | MS.gene00106:CDS |
ACGATATAATTCAGGATCCA+AGG | 0.576287 | 2.1:-59413395 | None:intergenic |
GAGGAAGCTGGAATAGATGG+AGG | 0.577218 | 2.1:+59410881 | MS.gene00106:CDS |
TGGAACGGAATCGACGCTTG+TGG | 0.578080 | 2.1:+59394442 | MS.gene00106:CDS |
TAATCTGTCGAGAGCATCCT+CGG | 0.578790 | 2.1:-59417432 | None:intergenic |
ATTTGCAGGCTATGTTCGAA+GGG | 0.580348 | 2.1:+59413023 | MS.gene00106:intron |
TGATGTGATTGAGATGTTCT+GGG | 0.581943 | 2.1:+59416952 | MS.gene00106:CDS |
ATGTGCTCTCGTGAACTACC+GGG | 0.586051 | 2.1:+59401158 | MS.gene00106:CDS |
TCCAAGATTGGAACAACAGA+CGG | 0.587076 | 2.1:+59410144 | MS.gene00106:CDS |
AGCCTTTGTTCTGCATACAA+AGG | 0.588497 | 2.1:+59417150 | MS.gene00106:CDS |
AGTCTCAACTAGCTGCAGCT+AGG | 0.589104 | 2.1:+59410606 | MS.gene00106:intron |
AGATATCGGAATCCAAGTAA+TGG | 0.591674 | 2.1:-59417125 | None:intergenic |
GATAATGCAGAGAAATGTAT+CGG | 0.592130 | 2.1:+59404714 | MS.gene00106:CDS |
CCAAGAAGACAGGCATAGGT+AGG | 0.593630 | 2.1:-59406225 | None:intergenic |
TGATAGAGCTCAAACTGCCA+TGG | 0.594647 | 2.1:+59402820 | MS.gene00106:CDS |
TCTAACTGAATTAGCAGATG+AGG | 0.596236 | 2.1:-59409509 | None:intergenic |
AGTCATTCACCCCGTCAGCA+TGG | 0.596729 | 2.1:-59410190 | None:intergenic |
CCTACTATCATACAGCTCCA+TGG | 0.600394 | 2.1:-59402837 | None:intergenic |
GGAGAAACCTCTATCACTGA+AGG | 0.602474 | 2.1:+59409042 | MS.gene00106:CDS |
CACCTTTGTATGCAGAACAA+AGG | 0.608363 | 2.1:-59417152 | None:intergenic |
TATATGCAAGTTTCTTCACC+CGG | 0.609443 | 2.1:-59401176 | None:intergenic |
ATGCTGTATTTACTAGACAT+CGG | 0.612216 | 2.1:+59410645 | MS.gene00106:CDS |
TATAATTCAGGATCCAAGGA+AGG | 0.615554 | 2.1:-59413391 | None:intergenic |
AGAAATATAGGAACTGGCGG+AGG | 0.621297 | 2.1:-59398788 | None:intergenic |
TGTCAGATCTTGTCAAAGAG+TGG | 0.621443 | 2.1:-59407172 | None:intergenic |
ATTTCCAAAGCATAGGAACA+AGG | 0.623611 | 2.1:-59408239 | None:intergenic |
TGTGCTTCTTGTAGGGCTGG+AGG | 0.623790 | 2.1:+59417401 | MS.gene00106:intron |
GATGATATACCAGTTGCAGA+AGG | 0.624211 | 2.1:-59407963 | None:intergenic |
GCTGCAGCTAGGCAAAGGAA+TGG | 0.625079 | 2.1:+59410617 | MS.gene00106:CDS |
AGAAGAGGAGCTGCTTCCAG+GGG | 0.627225 | 2.1:+59414560 | MS.gene00106:CDS |
CCTGCTTCAACAAAATGATG+AGG | 0.628011 | 2.1:-59409075 | None:intergenic |
AATGGTCATCTTTGTCTGAG+CGG | 0.630785 | 2.1:+59408289 | MS.gene00106:CDS |
TGACCATTAGCGTTATGATG+GGG | 0.635205 | 2.1:+59414479 | MS.gene00106:intron |
GATATGGAGGTTGCAGCCGT+TGG | 0.639029 | 2.1:+59408135 | MS.gene00106:CDS |
ATGTTCTGGGAAGTACTCAA+GGG | 0.641318 | 2.1:+59416965 | MS.gene00106:CDS |
CAGTGATTTCCATGCTGACG+GGG | 0.641822 | 2.1:+59410181 | MS.gene00106:CDS |
ATATGGAGAGCAAACAGAAG+AGG | 0.643021 | 2.1:+59414545 | MS.gene00106:CDS |
ACAGGACAGAATACAGCAAG+TGG | 0.644931 | 2.1:-59408351 | None:intergenic |
TGTAAATGGTATCAAGAAAG+CGG | 0.647908 | 2.1:-59410351 | None:intergenic |
ACAGGTGTAATGTGTCACAT+TGG | 0.648085 | 2.1:+59404759 | MS.gene00106:CDS |
CAATGGGCCTGATGATATGG+AGG | 0.650698 | 2.1:+59408122 | MS.gene00106:CDS |
CGTAAACGCGTTGATTTGGG+AGG | 0.651848 | 2.1:+59394369 | MS.gene00106:CDS |
ATTTCATGGAGAACATCACA+CGG | 0.652064 | 2.1:+59410918 | MS.gene00106:CDS |
AACCAGGGGCATCCCCTGAG+AGG | 0.652327 | 2.1:-59408320 | None:intergenic |
GTCAGCATGGAAATCACTGG+GGG | 0.654099 | 2.1:-59410177 | None:intergenic |
ACACTGTAGTAACAGCTGCA+AGG | 0.654939 | 2.1:-59407136 | None:intergenic |
GGCTGGAGGTAATGCTACCG+AGG | 0.660652 | 2.1:+59417415 | MS.gene00106:CDS |
CAAGTGGTAACAGCCAACCA+GGG | 0.664170 | 2.1:-59408335 | None:intergenic |
ACTGTTATAGATCTCAAGAG+TGG | 0.668656 | 2.1:+59417570 | MS.gene00106:intron |
CTATTGAAGCTATTCAACAG+AGG | 0.670609 | 2.1:+59409566 | MS.gene00106:CDS |
AGAACAAACCTTCTATACGG+TGG | 0.671400 | 2.1:-59417491 | None:intergenic |
TAAACGAAGATGTTCTTCAG+TGG | 0.672441 | 2.1:+59394333 | None:intergenic |
TCAATTTATCCAGGAAACAG+CGG | 0.676585 | 2.1:+59412749 | MS.gene00106:intron |
AAGTGGTAACAGCCAACCAG+GGG | 0.686564 | 2.1:-59408334 | None:intergenic |
TAAAGAAATATAGGAACTGG+CGG | 0.686987 | 2.1:-59398791 | None:intergenic |
TTTCATGGAGAACATCACAC+GGG | 0.711480 | 2.1:+59410919 | MS.gene00106:CDS |
GAAGAGGAGCTGCTTCCAGG+GGG | 0.718904 | 2.1:+59414561 | MS.gene00106:CDS |
TGTTACTACAGTGTTACTGG+AGG | 0.734412 | 2.1:+59407145 | MS.gene00106:CDS |
GCGGTTATCATACCTCTCAG+GGG | 0.751027 | 2.1:+59408308 | MS.gene00106:CDS |
CGTCAGCATGGAAATCACTG+GGG | 0.751952 | 2.1:-59410178 | None:intergenic |
CCTTTGCAAGAAGAGTACCA+AGG | 0.796733 | 2.1:-59412839 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 59394342 | 59417598 | 59394342 | ID=MS.gene00106 |
chr2.1 | mRNA | 59394342 | 59417598 | 59394342 | ID=MS.gene00106.t1;Parent=MS.gene00106 |
chr2.1 | exon | 59394342 | 59394500 | 59394342 | ID=MS.gene00106.t1.exon1;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59394342 | 59394500 | 59394342 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59398495 | 59398592 | 59398495 | ID=MS.gene00106.t1.exon2;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59398495 | 59398592 | 59398495 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59398761 | 59398888 | 59398761 | ID=MS.gene00106.t1.exon3;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59398761 | 59398888 | 59398761 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59401115 | 59401226 | 59401115 | ID=MS.gene00106.t1.exon4;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59401115 | 59401226 | 59401115 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59402737 | 59402917 | 59402737 | ID=MS.gene00106.t1.exon5;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59402737 | 59402917 | 59402737 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59404714 | 59404884 | 59404714 | ID=MS.gene00106.t1.exon6;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59404714 | 59404884 | 59404714 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59406123 | 59406305 | 59406123 | ID=MS.gene00106.t1.exon7;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59406123 | 59406305 | 59406123 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59407128 | 59407203 | 59407128 | ID=MS.gene00106.t1.exon8;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59407128 | 59407203 | 59407128 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59407857 | 59407975 | 59407857 | ID=MS.gene00106.t1.exon9;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59407857 | 59407975 | 59407857 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59408090 | 59408379 | 59408090 | ID=MS.gene00106.t1.exon10;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59408090 | 59408379 | 59408090 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59409000 | 59409096 | 59409000 | ID=MS.gene00106.t1.exon11;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59409000 | 59409096 | 59409000 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59409478 | 59409621 | 59409478 | ID=MS.gene00106.t1.exon12;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59409478 | 59409621 | 59409478 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59410143 | 59410226 | 59410143 | ID=MS.gene00106.t1.exon13;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59410143 | 59410226 | 59410143 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59410308 | 59410394 | 59410308 | ID=MS.gene00106.t1.exon14;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59410308 | 59410394 | 59410308 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59410608 | 59410748 | 59410608 | ID=MS.gene00106.t1.exon15;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59410608 | 59410748 | 59410608 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59410848 | 59410973 | 59410848 | ID=MS.gene00106.t1.exon16;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59410848 | 59410973 | 59410848 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59412762 | 59412860 | 59412762 | ID=MS.gene00106.t1.exon17;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59412762 | 59412860 | 59412762 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59413031 | 59413098 | 59413031 | ID=MS.gene00106.t1.exon18;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59413031 | 59413098 | 59413031 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59413369 | 59413435 | 59413369 | ID=MS.gene00106.t1.exon19;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59413369 | 59413435 | 59413369 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59414489 | 59414659 | 59414489 | ID=MS.gene00106.t1.exon20;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59414489 | 59414659 | 59414489 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59414747 | 59414836 | 59414747 | ID=MS.gene00106.t1.exon21;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59414747 | 59414836 | 59414747 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59415943 | 59416023 | 59415943 | ID=MS.gene00106.t1.exon22;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59415943 | 59416023 | 59415943 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59416947 | 59417020 | 59416947 | ID=MS.gene00106.t1.exon23;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59416947 | 59417020 | 59416947 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59417100 | 59417171 | 59417100 | ID=MS.gene00106.t1.exon24;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59417100 | 59417171 | 59417100 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59417415 | 59417504 | 59417415 | ID=MS.gene00106.t1.exon25;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59417415 | 59417504 | 59417415 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
chr2.1 | exon | 59417580 | 59417598 | 59417580 | ID=MS.gene00106.t1.exon26;Parent=MS.gene00106.t1 |
chr2.1 | CDS | 59417580 | 59417598 | 59417580 | ID=cds.MS.gene00106.t1;Parent=MS.gene00106.t1 |
Gene Sequence |
Protein sequence |