Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015570.t1 | XP_003611115.1 | 87.1 | 1064 | 135 | 1 | 1 | 1064 | 1 | 1062 | 0.00E+00 | 1453.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015570.t1 | G7KDD8 | 87.1 | 1064 | 135 | 1 | 1 | 1064 | 1 | 1062 | 0.0e+00 | 1453.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene015570 | MS.gene93913 | PPI |
MS.gene015570 | MS.gene93911 | PPI |
MS.gene006300 | MS.gene015570 | PPI |
MS.gene015570 | MS.gene94636 | PPI |
MS.gene015570 | MS.gene058289 | PPI |
MS.gene00106 | MS.gene015570 | PPI |
MS.gene015570 | MS.gene043158 | PPI |
MS.gene015570 | MS.gene34485 | PPI |
MS.gene94379 | MS.gene015570 | PPI |
MS.gene015570 | MS.gene91501 | PPI |
MS.gene55940 | MS.gene015570 | PPI |
MS.gene41427 | MS.gene015570 | PPI |
MS.gene015570 | MS.gene005105 | PPI |
MS.gene43975 | MS.gene015570 | PPI |
MS.gene015570 | MS.gene49082 | PPI |
MS.gene93915 | MS.gene015570 | PPI |
MS.gene015570 | MS.gene48616 | PPI |
MS.gene015570 | MS.gene073110 | PPI |
MS.gene015570 | MS.gene35346 | PPI |
MS.gene015570 | MS.gene67841 | PPI |
MS.gene036437 | MS.gene015570 | PPI |
MS.gene033776 | MS.gene015570 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015570.t1 | MTR_5g010520 | 96.053 | 1064 | 40 | 1 | 1 | 1064 | 1 | 1062 | 0.0 | 2058 |
MS.gene015570.t1 | MTR_5g010520 | 95.736 | 938 | 38 | 1 | 1 | 938 | 1 | 936 | 0.0 | 1815 |
MS.gene015570.t1 | MTR_8g097350 | 63.485 | 1079 | 332 | 10 | 1 | 1064 | 1 | 1032 | 0.0 | 1270 |
MS.gene015570.t1 | MTR_8g097350 | 64.451 | 993 | 314 | 9 | 1 | 978 | 1 | 969 | 0.0 | 1200 |
MS.gene015570.t1 | MTR_0415s0020 | 67.485 | 326 | 106 | 0 | 541 | 866 | 16 | 341 | 6.74e-138 | 419 |
MS.gene015570.t1 | MTR_1g100633 | 37.018 | 778 | 419 | 16 | 1 | 771 | 1 | 714 | 1.87e-135 | 429 |
MS.gene015570.t1 | MTR_1g100633 | 37.018 | 778 | 419 | 16 | 1 | 771 | 1 | 714 | 1.96e-135 | 428 |
MS.gene015570.t1 | MTR_1g100633 | 37.018 | 778 | 419 | 16 | 1 | 771 | 1 | 714 | 3.20e-135 | 430 |
MS.gene015570.t1 | MTR_1g100633 | 70.909 | 55 | 16 | 0 | 1009 | 1063 | 798 | 852 | 1.09e-14 | 79.3 |
MS.gene015570.t1 | MTR_0415s0010 | 60.068 | 293 | 105 | 3 | 183 | 465 | 1 | 291 | 3.93e-95 | 304 |
MS.gene015570.t1 | MTR_3g073620 | 25.890 | 730 | 431 | 20 | 1 | 672 | 1 | 678 | 4.64e-46 | 181 |
MS.gene015570.t1 | MTR_1g062200 | 25.786 | 477 | 274 | 14 | 1 | 437 | 1 | 437 | 2.02e-25 | 114 |
MS.gene015570.t1 | MTR_1g062200 | 25.786 | 477 | 274 | 14 | 1 | 437 | 1 | 437 | 2.31e-25 | 114 |
MS.gene015570.t1 | MTR_1g090807 | 23.060 | 464 | 308 | 14 | 1 | 434 | 25 | 469 | 6.86e-17 | 87.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015570.t1 | AT1G63300 | 47.717 | 1073 | 508 | 15 | 1 | 1064 | 1 | 1029 | 0.0 | 845 |
MS.gene015570.t1 | AT5G41140 | 45.143 | 1081 | 476 | 20 | 1 | 1063 | 1 | 982 | 0.0 | 782 |
MS.gene015570.t1 | AT5G41140 | 44.949 | 1079 | 474 | 19 | 1 | 1063 | 1 | 975 | 0.0 | 778 |
MS.gene015570.t1 | AT5G52280 | 36.201 | 895 | 445 | 18 | 1 | 888 | 1 | 776 | 8.30e-137 | 434 |
MS.gene015570.t1 | AT5G52280 | 61.905 | 63 | 24 | 0 | 1001 | 1063 | 790 | 852 | 1.03e-13 | 76.3 |
MS.gene015570.t1 | AT1G22060 | 25.652 | 729 | 422 | 23 | 1 | 673 | 1 | 665 | 1.42e-41 | 167 |
MS.gene015570.t1 | AT1G22060 | 25.652 | 729 | 422 | 23 | 1 | 673 | 1 | 665 | 1.42e-41 | 167 |
Find 195 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGTTTCCTTTGACTTTATC+AGG | 0.217694 | 5.1:-3996863 | None:intergenic |
CTGTATCGCCGTTGCTGAAT+TGG | 0.249416 | 5.1:-3994159 | None:intergenic |
CCTCCTCTAATCTTCTGATA+TGG | 0.253588 | 5.1:-3995656 | None:intergenic |
CTCAGAGCTCGGGTTAAGTA+TGG | 0.286991 | 5.1:+3994699 | MS.gene015570:CDS |
TCTGCTCCAACATCTCTTCC+AGG | 0.286998 | 5.1:-3995161 | None:intergenic |
CCAGCATTGAGAAGAGATTC+AGG | 0.288948 | 5.1:+3996552 | MS.gene015570:CDS |
ATGGGTTTCTAGTACCTTAA+TGG | 0.298162 | 5.1:-3995637 | None:intergenic |
CTCAAACAAGTGTGTCTCTT+TGG | 0.299665 | 5.1:-3995334 | None:intergenic |
TCTTTATTTCACTCTTTAGC+TGG | 0.301119 | 5.1:-3996511 | None:intergenic |
GTTGATACTCCCTGCGAAAT+TGG | 0.316541 | 5.1:+3994532 | MS.gene015570:CDS |
TCCGCGGCACGGGCCATAAC+TGG | 0.317067 | 5.1:-3994598 | None:intergenic |
TAGTTGACTGAAGCTCTTCT+TGG | 0.317857 | 5.1:-3995959 | None:intergenic |
CCTTTACAATTTGTTTCCTA+AGG | 0.319699 | 5.1:-3994861 | None:intergenic |
CGTTCTGTTGTTTATTGCTT+TGG | 0.325606 | 5.1:-3994461 | None:intergenic |
AGCTTGGGGAACAAGTTAAT+AGG | 0.327660 | 5.1:+3996102 | MS.gene015570:CDS |
AGATGTTTCGTTCTTCAAAA+TGG | 0.329139 | 5.1:+3992843 | None:intergenic |
CTCCTCTAATCTTCTGATAT+GGG | 0.332595 | 5.1:-3995655 | None:intergenic |
GCAAGAATCAAATGCTGAAT+TGG | 0.334048 | 5.1:+3995122 | MS.gene015570:CDS |
TGTTTAACTGTTCCTGCAAT+TGG | 0.337470 | 5.1:-3995500 | None:intergenic |
CTCCAAATGGGATGCCTCTT+GGG | 0.337850 | 5.1:-3994767 | None:intergenic |
TGCCTCTTGGGAACTTTCCT+TGG | 0.342709 | 5.1:-3994755 | None:intergenic |
GCTTTCTCTAATCTCTTTGT+TGG | 0.351234 | 5.1:-3993448 | None:intergenic |
TTCGCAATGCTTCCTCGGCT+TGG | 0.354438 | 5.1:-3995761 | None:intergenic |
TGAAACTCACATTGAGAATC+TGG | 0.362265 | 5.1:+3995566 | MS.gene015570:CDS |
CGAAACAGTCAAGTATTATC+AGG | 0.373302 | 5.1:+3993513 | MS.gene015570:CDS |
AATGGAGGAGTGAGAAGAAT+AGG | 0.381314 | 5.1:+3992861 | MS.gene015570:CDS |
CAAATCTGAACTCGCTGCTT+TGG | 0.381316 | 5.1:+3994801 | MS.gene015570:CDS |
TTCCCAAGAGGCATCCCATT+TGG | 0.381326 | 5.1:+3994765 | MS.gene015570:CDS |
AAACCAGTTTGTTCCAGTTA+TGG | 0.383737 | 5.1:+3994585 | MS.gene015570:CDS |
TCGAAAATCAGAAGAAGCTT+GGG | 0.384283 | 5.1:+3996087 | MS.gene015570:CDS |
GCTTGGGGAACAAGTTAATA+GGG | 0.389725 | 5.1:+3996103 | MS.gene015570:CDS |
GAGAAAACTCTCAGCCCTTA+TGG | 0.392278 | 5.1:-3997633 | None:intergenic |
CAATGCTTCCTCGGCTTGGA+TGG | 0.396921 | 5.1:-3995757 | None:intergenic |
GAGGCATTAACAGCAGCATT+TGG | 0.397470 | 5.1:-3994625 | None:intergenic |
TCATTTGCATTGAGAGTCTC+TGG | 0.397576 | 5.1:-3995833 | None:intergenic |
AGAGTTTCATCTCTAACTCT+TGG | 0.402659 | 5.1:-3995242 | None:intergenic |
TCCTCATCATTCAAAAGAAA+TGG | 0.405576 | 5.1:+3996646 | MS.gene015570:CDS |
AAATTCTCTAGCTACCATTA+AGG | 0.413944 | 5.1:+3995623 | MS.gene015570:CDS |
TTGTCTGATTTCTTCGACAA+AGG | 0.415014 | 5.1:-3995043 | None:intergenic |
AGAAGAAGTAAGAAATAGAT+TGG | 0.415538 | 5.1:+3997426 | MS.gene015570:CDS |
TTCCTTCAATGACGACAATT+CGG | 0.418972 | 5.1:-3997482 | None:intergenic |
TCTCCAAATGGGATGCCTCT+TGG | 0.421036 | 5.1:-3994768 | None:intergenic |
GACCGAATTGTCGTCATTGA+AGG | 0.423001 | 5.1:+3997480 | MS.gene015570:CDS |
CAGAAGATTAGAGGAGGAGA+TGG | 0.426220 | 5.1:+3995662 | MS.gene015570:CDS |
TATCAAAAGCTAGCGCGGTC+GGG | 0.426391 | 5.1:+3993683 | MS.gene015570:CDS |
AAATTGTCGGTGGGAGAATT+CGG | 0.427835 | 5.1:+3993486 | MS.gene015570:CDS |
CTGTGACCTGTTTCTCACTT+TGG | 0.434319 | 5.1:-3994998 | None:intergenic |
ATATTTCAGGTGTTACAATC+AGG | 0.434804 | 5.1:+3993379 | MS.gene015570:intron |
GCTAGAGCAAAGCCAATTGC+AGG | 0.435772 | 5.1:+3995488 | MS.gene015570:CDS |
TGAGTCTCTCCATCTCCAAA+TGG | 0.437670 | 5.1:-3994780 | None:intergenic |
AACCCATATCAGAAGATTAG+AGG | 0.442026 | 5.1:+3995653 | MS.gene015570:CDS |
TTGGGAACTTTCCTTGGAAA+GGG | 0.444214 | 5.1:-3994749 | None:intergenic |
AGACTATGAGATATTAAAAC+AGG | 0.445367 | 5.1:+3995443 | MS.gene015570:CDS |
CTCATGTCTCTCTTCCCATC+AGG | 0.446018 | 5.1:+3993752 | MS.gene015570:CDS |
CTCGAAAATCAGAAGAAGCT+TGG | 0.447142 | 5.1:+3996086 | MS.gene015570:CDS |
TAGACGCAGTTCACTTGCTT+CGG | 0.447539 | 5.1:-3995901 | None:intergenic |
CTTGGGAACTTTCCTTGGAA+AGG | 0.451320 | 5.1:-3994750 | None:intergenic |
GCGGAGATGAACACTCATAT+TGG | 0.455757 | 5.1:-3995524 | None:intergenic |
ACGATGCCAAAGTGAGAAAC+AGG | 0.457175 | 5.1:+3994992 | MS.gene015570:CDS |
GACACTCTTGAGGTTTCTTA+CGG | 0.459347 | 5.1:-3997611 | None:intergenic |
AAACCTCAAGAGTGTCCATA+AGG | 0.465783 | 5.1:+3997618 | MS.gene015570:CDS |
GGTCTTTCGCAATGCTTCCT+CGG | 0.468804 | 5.1:-3995766 | None:intergenic |
CTTTATTTCACTCTTTAGCT+GGG | 0.470948 | 5.1:-3996510 | None:intergenic |
CTCTTAAATGAACAAGTAGA+AGG | 0.471330 | 5.1:+3996188 | MS.gene015570:CDS |
CTTTACAATTTGTTTCCTAA+GGG | 0.471588 | 5.1:-3994860 | None:intergenic |
ATGGGGAAATCGAAATGTAT+AGG | 0.471968 | 5.1:+3995376 | MS.gene015570:CDS |
AGAGACATGAGAGGGCTTTG+TGG | 0.474075 | 5.1:-3993740 | None:intergenic |
TGGCATCGTCCATGCGTTTG+TGG | 0.475881 | 5.1:-3994978 | None:intergenic |
CTAGCTTATGTACAAGCTTG+TGG | 0.476951 | 5.1:-3995470 | None:intergenic |
ATTTGGAGATTCCGCGGCAC+GGG | 0.477344 | 5.1:-3994608 | None:intergenic |
GCTTCAATTCAATGCTACTA+AGG | 0.477435 | 5.1:+3992901 | MS.gene015570:CDS |
GAGTTTCATCTCTAACTCTT+GGG | 0.477504 | 5.1:-3995241 | None:intergenic |
CGCTGCTTTGGCGAGGCACG+TGG | 0.482197 | 5.1:+3994813 | MS.gene015570:CDS |
GGTTCTTGCCGTGCAGGACC+TGG | 0.487908 | 5.1:+3995143 | MS.gene015570:CDS |
GGGCCATAACTGGAACAAAC+TGG | 0.489446 | 5.1:-3994588 | None:intergenic |
AGACAGAATGTGACAATGTC+AGG | 0.491642 | 5.1:+3994950 | MS.gene015570:CDS |
TTATCAAAAGCTAGCGCGGT+CGG | 0.492008 | 5.1:+3993682 | MS.gene015570:CDS |
TCAAGTTCTGATGACAGCTC+TGG | 0.494881 | 5.1:+3994508 | MS.gene015570:CDS |
TGAATTGGTTCTTGCCGTGC+AGG | 0.496687 | 5.1:+3995137 | MS.gene015570:CDS |
CCTGAATCTCTTCTCAATGC+TGG | 0.497104 | 5.1:-3996552 | None:intergenic |
GTCTAAACATTCCAATGGAC+AGG | 0.497144 | 5.1:+3995203 | MS.gene015570:CDS |
TTGTCTTTCACCTTCGACCT+CGG | 0.497897 | 5.1:-3997575 | None:intergenic |
GAGTCTCTCCATCTCCAAAT+GGG | 0.499624 | 5.1:-3994779 | None:intergenic |
TCCAGTTATGGCCCGTGCCG+CGG | 0.500299 | 5.1:+3994597 | MS.gene015570:CDS |
CACAATTGCGTCATTGAAGA+AGG | 0.500768 | 5.1:+3996313 | MS.gene015570:CDS |
TCAATGTCATTCATAGCAGC+AGG | 0.501038 | 5.1:-3995546 | None:intergenic |
AGCCCTTATGGACACTCTTG+AGG | 0.501555 | 5.1:-3997621 | None:intergenic |
AAGAGTGAAATAAAGAAGAA+AGG | 0.501656 | 5.1:+3996518 | MS.gene015570:CDS |
AAAGTCAAAGGAAACTGCCT+TGG | 0.503241 | 5.1:+3996869 | MS.gene015570:CDS |
AACAACTTCATCTATGAAGA+AGG | 0.504107 | 5.1:+3996899 | MS.gene015570:CDS |
TTCATCTATGAAGAAGGAAA+AGG | 0.506959 | 5.1:+3996905 | MS.gene015570:CDS |
TTGGTGTTGTCAATAGTTCC+TGG | 0.507047 | 5.1:+3993412 | MS.gene015570:CDS |
CTCAAATTTGCCGAGGTCGA+AGG | 0.512604 | 5.1:+3997565 | MS.gene015570:CDS |
ACATGGAACTACAGACCCTT+AGG | 0.513199 | 5.1:+3994845 | MS.gene015570:CDS |
TCAATAGTTCCTGGTGACAT+TGG | 0.514235 | 5.1:+3993421 | MS.gene015570:CDS |
ATCAAAAGCTAGCGCGGTCG+GGG | 0.515068 | 5.1:+3993684 | MS.gene015570:CDS |
CATTATCTTGAAAGATGAAA+GGG | 0.517094 | 5.1:+3994918 | MS.gene015570:CDS |
TCAGAGCAGAATTGTGGAGC+TGG | 0.519772 | 5.1:+3996932 | MS.gene015570:CDS |
GAAGGAAAGAAACAAATCAA+TGG | 0.521587 | 5.1:+3997498 | MS.gene015570:CDS |
TTTATCGTGTTCCTGTCCAT+TGG | 0.522075 | 5.1:-3995214 | None:intergenic |
AGTATGGGCGATTCAACAAA+CGG | 0.523348 | 5.1:+3994715 | MS.gene015570:CDS |
ATTGTAAAGGAAAGCAAAAG+AGG | 0.523810 | 5.1:+3994874 | MS.gene015570:CDS |
GCAGGACCTGGAAGAGATGT+TGG | 0.525811 | 5.1:+3995155 | MS.gene015570:CDS |
TTTACATCAGAGATCACAAT+GGG | 0.529077 | 5.1:+3994663 | MS.gene015570:CDS |
TTCTCAAAATGCCCTTTCCA+AGG | 0.530388 | 5.1:+3994738 | MS.gene015570:CDS |
CGTCATCTAGCTCAGAGCTC+GGG | 0.531611 | 5.1:+3994689 | MS.gene015570:CDS |
TACCTTTGATGAAAATGAGA+AGG | 0.534206 | 5.1:+3995860 | MS.gene015570:CDS |
ATAAACAACAGAACGTCTAG+TGG | 0.536249 | 5.1:+3994469 | MS.gene015570:CDS |
TGCTTCGGTCAATGCTCTCA+TGG | 0.536262 | 5.1:-3995886 | None:intergenic |
AACAGGTCACAGTTGGAAAG+TGG | 0.538483 | 5.1:+3995009 | MS.gene015570:CDS |
ACAATCAGGGGTAGATGCAT+TGG | 0.538961 | 5.1:+3993393 | MS.gene015570:CDS |
TATTTCAGGTGTTACAATCA+GGG | 0.542788 | 5.1:+3993380 | MS.gene015570:intron |
CATTTGGAGATTCCGCGGCA+CGG | 0.543245 | 5.1:-3994609 | None:intergenic |
AGAAATCTTAAGAACTGACT+TGG | 0.543909 | 5.1:+3996214 | MS.gene015570:CDS |
CGGTTCAAGATGGAAATTGT+CGG | 0.544548 | 5.1:+3993473 | MS.gene015570:CDS |
TCAGATACAGCAGATGTTGG+TGG | 0.544798 | 5.1:+3996040 | MS.gene015570:CDS |
TCTGAAACATTGTTACATCA+AGG | 0.545037 | 5.1:+3996263 | MS.gene015570:CDS |
TCGTCATCTAGCTCAGAGCT+CGG | 0.545721 | 5.1:+3994688 | MS.gene015570:CDS |
TTGTATCTATTTGATTGCAA+AGG | 0.545922 | 5.1:-3996010 | None:intergenic |
TGAAGTTGTTGAACTTTCCA+AGG | 0.546447 | 5.1:-3996886 | None:intergenic |
GGACGCAACCAACTTTCTGA+TGG | 0.547926 | 5.1:+3996584 | MS.gene015570:CDS |
TAGACTATTGAAGTCAGAGT+TGG | 0.550029 | 5.1:+3996403 | MS.gene015570:CDS |
GAGAAAGCTACGGTTCAAGA+TGG | 0.550233 | 5.1:+3993463 | MS.gene015570:CDS |
CAGCATTGAGAAGAGATTCA+GGG | 0.550761 | 5.1:+3996553 | MS.gene015570:CDS |
AACTGGAACAAACTGGTTTG+TGG | 0.550964 | 5.1:-3994581 | None:intergenic |
TATTATCAGGATCCAAAGAC+CGG | 0.553668 | 5.1:+3993526 | MS.gene015570:CDS |
GTTGGTCTTCCAATGTCACC+AGG | 0.557975 | 5.1:-3993430 | None:intergenic |
GGAACTTCAGAGCAGAATTG+TGG | 0.558888 | 5.1:+3996926 | MS.gene015570:CDS |
GGAACAAACTGGTTTGTGGT+GGG | 0.559149 | 5.1:-3994577 | None:intergenic |
AACCTCAAGAGTGTCCATAA+GGG | 0.560828 | 5.1:+3997619 | MS.gene015570:CDS |
CACGCGGACAATAGTCTTGG+TGG | 0.562303 | 5.1:+3997451 | MS.gene015570:CDS |
GGCGAGGCACGTGGATGTGT+CGG | 0.566205 | 5.1:+3994822 | MS.gene015570:CDS |
GCACGTGGATGTGTCGGACA+TGG | 0.566394 | 5.1:+3994828 | MS.gene015570:CDS |
TCATTATCTTGAAAGATGAA+AGG | 0.568558 | 5.1:+3994917 | MS.gene015570:CDS |
ACTTATGAAGAAATCAATTG+AGG | 0.571259 | 5.1:+3996238 | MS.gene015570:CDS |
CCTTAGGAAACAAATTGTAA+AGG | 0.572841 | 5.1:+3994861 | MS.gene015570:CDS |
GAACACGCGGACAATAGTCT+TGG | 0.573106 | 5.1:+3997448 | MS.gene015570:CDS |
GGGAAATCGAAATGTATAGG+AGG | 0.573376 | 5.1:+3995379 | MS.gene015570:CDS |
TGAAGCTGATATAGAAGCAA+TGG | 0.579079 | 5.1:+3995704 | MS.gene015570:CDS |
AGTGAGAAACAGGTCACAGT+TGG | 0.580096 | 5.1:+3995002 | MS.gene015570:CDS |
TGCGTCATTGAAGAAGGAAG+CGG | 0.583079 | 5.1:+3996319 | MS.gene015570:CDS |
AGAGGCATCCCATTTGGAGA+TGG | 0.583581 | 5.1:+3994771 | MS.gene015570:CDS |
CTTCCCATCAGGAATTCTCA+TGG | 0.584077 | 5.1:+3993763 | MS.gene015570:CDS |
AATTCAGATACAGCAGATGT+TGG | 0.585982 | 5.1:+3996037 | MS.gene015570:CDS |
AAAGGAAAGCAAAAGAGGGC+AGG | 0.588422 | 5.1:+3994879 | MS.gene015570:CDS |
TAAATCATGCATCGGTGTCG+AGG | 0.589755 | 5.1:-3994644 | None:intergenic |
ATTTCAGGTGTTACAATCAG+GGG | 0.591987 | 5.1:+3993381 | MS.gene015570:intron |
AATATGTCTAAACATTCCAA+TGG | 0.592097 | 5.1:+3995198 | MS.gene015570:CDS |
AATTCGATGATAAGAGCTCA+AGG | 0.592445 | 5.1:+3994134 | MS.gene015570:CDS |
TCAGAGCTCGGGTTAAGTAT+GGG | 0.598271 | 5.1:+3994700 | MS.gene015570:CDS |
AGAACTCAAGGAGCAGTCAG+AGG | 0.599935 | 5.1:+3995593 | MS.gene015570:CDS |
TACAGCTGAAAGGCTTCAAG+AGG | 0.600122 | 5.1:+3995806 | MS.gene015570:CDS |
TTCAAGATGGAAATTGTCGG+TGG | 0.600830 | 5.1:+3993476 | MS.gene015570:CDS |
TCAGGGCCTGATAAAGTCAA+AGG | 0.602212 | 5.1:+3996857 | MS.gene015570:intron |
AGCATTGGATGATCTTGTCA+AGG | 0.603938 | 5.1:+3995299 | MS.gene015570:CDS |
TGTTTCGTTCTTCAAAATGG+AGG | 0.604012 | 5.1:+3992846 | MS.gene015570:CDS |
GAACAAACTGGTTTGTGGTG+GGG | 0.604811 | 5.1:-3994576 | None:intergenic |
CTGAACTCGCTGCTTTGGCG+AGG | 0.604966 | 5.1:+3994806 | MS.gene015570:CDS |
TTTCTCAGTCCAATTTCGCA+GGG | 0.605119 | 5.1:-3994541 | None:intergenic |
AAGTAAAATGAGAAATCTCA+AGG | 0.605138 | 5.1:+3996361 | MS.gene015570:CDS |
CTCTGATGTAAATCATGCAT+CGG | 0.607162 | 5.1:-3994652 | None:intergenic |
AGCAGCATTTGGAGATTCCG+CGG | 0.610316 | 5.1:-3994614 | None:intergenic |
TGGAACAAACTGGTTTGTGG+TGG | 0.614538 | 5.1:-3994578 | None:intergenic |
AAGAGGGCAGGATCTCATGA+AGG | 0.615741 | 5.1:+3994891 | MS.gene015570:CDS |
CAGGTCTTTCCACAAACGCA+TGG | 0.619261 | 5.1:+3994969 | MS.gene015570:CDS |
TTGTAAAGGAAAGCAAAAGA+GGG | 0.620965 | 5.1:+3994875 | MS.gene015570:CDS |
AAAATGCTAATACAGCTGAA+AGG | 0.622552 | 5.1:+3995796 | MS.gene015570:CDS |
GCAAAGAGCCATCCAAGCCG+AGG | 0.624482 | 5.1:+3995749 | MS.gene015570:CDS |
AAGAGATTCAGGGATAGTAA+CGG | 0.632337 | 5.1:+3996563 | MS.gene015570:CDS |
ATGGGAAGAGAGACATGAGA+GGG | 0.634288 | 5.1:-3993748 | None:intergenic |
TCAAGATGGAAATTGTCGGT+GGG | 0.636130 | 5.1:+3993477 | MS.gene015570:CDS |
ATCACCATGAGAATTCCTGA+TGG | 0.636391 | 5.1:-3993767 | None:intergenic |
TCACCATGAGAATTCCTGAT+GGG | 0.636505 | 5.1:-3993766 | None:intergenic |
AAAGAGATTAGAGAAAGCTA+CGG | 0.643270 | 5.1:+3993453 | MS.gene015570:CDS |
AATGTATAGGAGGGACAAAG+AGG | 0.644821 | 5.1:+3995389 | MS.gene015570:CDS |
TGTGGAGCTGGAGAACAAAG+TGG | 0.648905 | 5.1:+3996944 | MS.gene015570:CDS |
GGAAATCGAAATGTATAGGA+GGG | 0.649296 | 5.1:+3995380 | MS.gene015570:CDS |
TCAAGGAACCAATTCAGCAA+CGG | 0.650410 | 5.1:+3994151 | MS.gene015570:CDS |
ATTGTTACATCAAGGAACTG+TGG | 0.651765 | 5.1:+3996271 | MS.gene015570:CDS |
CCATATCAGAAGATTAGAGG+AGG | 0.654206 | 5.1:+3995656 | MS.gene015570:CDS |
CATCTCTTCCAGGTCCTGCA+CGG | 0.656396 | 5.1:-3995151 | None:intergenic |
CGAAAATCAGAAGAAGCTTG+GGG | 0.658269 | 5.1:+3996088 | MS.gene015570:CDS |
TAAACAACAGAACGTCTAGT+GGG | 0.662018 | 5.1:+3994470 | MS.gene015570:CDS |
TTCCAAGGAAAGTTCCCAAG+AGG | 0.662303 | 5.1:+3994753 | MS.gene015570:CDS |
GATGGGAAGAGAGACATGAG+AGG | 0.665257 | 5.1:-3993749 | None:intergenic |
AATGAGTCTCAAATTTGCCG+AGG | 0.681950 | 5.1:+3997558 | MS.gene015570:CDS |
AGTTAATAGGGATTTCTCTG+AGG | 0.682694 | 5.1:+3996115 | MS.gene015570:CDS |
TCAGAACGTTACTTTACACG+AGG | 0.685129 | 5.1:+3996977 | MS.gene015570:CDS |
GGGGTTATCAAAAGCTAGCG+CGG | 0.685962 | 5.1:+3993678 | MS.gene015570:intron |
ATGTCATTCATAGCAGCAGG+CGG | 0.688666 | 5.1:-3995543 | None:intergenic |
GTCAACTAAAGCCAATTACG+AGG | 0.689810 | 5.1:+3995974 | MS.gene015570:CDS |
ATTTACATCAGAGATCACAA+TGG | 0.703701 | 5.1:+3994662 | MS.gene015570:CDS |
AGAACTTGACAATGTAACGT+CGG | 0.708038 | 5.1:-3994494 | None:intergenic |
GGAGCTGGAGAACAAAGTGG+AGG | 0.710392 | 5.1:+3996947 | MS.gene015570:CDS |
AAGAAATAGATTGGAACACG+CGG | 0.713897 | 5.1:+3997435 | MS.gene015570:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATATTATTATTGAAATCT+AGG | - | chr5.1:3993184-3993203 | None:intergenic | 10.0% |
!!! | CATTTTTTTTTTATTCTTAA+TGG | + | chr5.1:3993292-3993311 | MS.gene015570:intron | 10.0% |
!! | AAAAAAATGATCAAATTCAA+AGG | + | chr5.1:3993964-3993983 | MS.gene015570:CDS | 15.0% |
!! | AAAAAAATTATAGACTTGTA+TGG | + | chr5.1:3995357-3995376 | MS.gene015570:CDS | 15.0% |
!! | AAAAAATTATAGACTTGTAT+GGG | + | chr5.1:3995358-3995377 | MS.gene015570:CDS | 15.0% |
!!! | GTCATTGTTATAAAATTTTT+GGG | + | chr5.1:3993645-3993664 | MS.gene015570:intron | 15.0% |
!!! | TGATTTTTTGATTAATAAAC+AGG | + | chr5.1:3993920-3993939 | MS.gene015570:intron | 15.0% |
!!! | TGTCATTGTTATAAAATTTT+TGG | + | chr5.1:3993644-3993663 | MS.gene015570:intron | 15.0% |
!!! | TTTTTATTCTTAATGGTATT+AGG | + | chr5.1:3993299-3993318 | MS.gene015570:intron | 15.0% |
!! | AAAAATTATAGACTTGTATG+GGG | + | chr5.1:3995359-3995378 | MS.gene015570:CDS | 20.0% |
!! | CAAGAAAATTGAAATATGAT+AGG | - | chr5.1:3993231-3993250 | None:intergenic | 20.0% |
!! | GAATGAATAATCTAATGTAT+TGG | + | chr5.1:3993042-3993061 | MS.gene015570:intron | 20.0% |
!! | TTTGTTTGTATATATTCAAC+TGG | + | chr5.1:3994298-3994317 | MS.gene015570:intron | 20.0% |
!!! | AAGCAATTTTTTTGTTGATT+GGG | - | chr5.1:3996622-3996641 | None:intergenic | 20.0% |
!!! | AATTTTCTTGGAAATGAAAA+TGG | + | chr5.1:3993241-3993260 | MS.gene015570:intron | 20.0% |
!!! | CATTATTATTTTTCCATTTC+TGG | + | chr5.1:3994005-3994024 | MS.gene015570:intron | 20.0% |
!!! | CTATCATATTTCAATTTTCT+TGG | + | chr5.1:3993229-3993248 | MS.gene015570:intron | 20.0% |
!!! | TTTTAATATCTCATAGTCTA+GGG | - | chr5.1:3995442-3995461 | None:intergenic | 20.0% |
! | AAAATTCTTGTGACTTCTTA+CGG | + | chr5.1:3994236-3994255 | MS.gene015570:intron | 25.0% |
! | AAGAGTGAAATAAAGAAGAA+AGG | + | chr5.1:3996518-3996537 | MS.gene015570:CDS | 25.0% |
! | AAGTAAAATGAGAAATCTCA+AGG | + | chr5.1:3996361-3996380 | MS.gene015570:CDS | 25.0% |
! | AATATGTCTAAACATTCCAA+TGG | + | chr5.1:3995198-3995217 | MS.gene015570:CDS | 25.0% |
! | ACATAAAAAGGAGAAAATGA+AGG | - | chr5.1:3996816-3996835 | None:intergenic | 25.0% |
! | ACTTATGAAGAAATCAATTG+AGG | + | chr5.1:3996238-3996257 | MS.gene015570:CDS | 25.0% |
! | AGAAGAAGTAAGAAATAGAT+TGG | + | chr5.1:3997426-3997445 | MS.gene015570:CDS | 25.0% |
! | AGACTATGAGATATTAAAAC+AGG | + | chr5.1:3995443-3995462 | MS.gene015570:CDS | 25.0% |
! | AGAGAAAATAAAAATGCTTG+AGG | + | chr5.1:3996679-3996698 | MS.gene015570:CDS | 25.0% |
! | CATTATCTTGAAAGATGAAA+GGG | + | chr5.1:3994918-3994937 | MS.gene015570:CDS | 25.0% |
! | TATTCTTAATGGTATTAGGT+TGG | + | chr5.1:3993303-3993322 | MS.gene015570:intron | 25.0% |
! | TCATTATCTTGAAAGATGAA+AGG | + | chr5.1:3994917-3994936 | MS.gene015570:CDS | 25.0% |
! | TTGTATCTATTTGATTGCAA+AGG | - | chr5.1:3996013-3996032 | None:intergenic | 25.0% |
!! | CTTTACAATTTGTTTCCTAA+GGG | - | chr5.1:3994863-3994882 | None:intergenic | 25.0% |
!!! | AAATTCAAAGGTACTACAAA+GGG | + | chr5.1:3993976-3993995 | MS.gene015570:intron | 25.0% |
!!! | AAATTTTTGGGTTTATATGC+AGG | + | chr5.1:3993657-3993676 | MS.gene015570:intron | 25.0% |
!!! | AATTTTTGGGTTTATATGCA+GGG | + | chr5.1:3993658-3993677 | MS.gene015570:intron | 25.0% |
!!! | AATTTTTTTGTTGATTGGGA+TGG | - | chr5.1:3996618-3996637 | None:intergenic | 25.0% |
!!! | ATATCATTTTTTGCTCTCAA+CGG | + | chr5.1:3993567-3993586 | MS.gene015570:CDS | 25.0% |
!!! | CTTCACATGTTTTTTACTTT+CGG | - | chr5.1:3994393-3994412 | None:intergenic | 25.0% |
!!! | CTTCACTCAAAATTTTGATT+AGG | - | chr5.1:3993867-3993886 | None:intergenic | 25.0% |
!!! | GAAGCAATTTTTTTGTTGAT+TGG | - | chr5.1:3996623-3996642 | None:intergenic | 25.0% |
!!! | GCATCTTTTTTAACTGTAAT+CGG | - | chr5.1:3995104-3995123 | None:intergenic | 25.0% |
!!! | GTTTTAATATCTCATAGTCT+AGG | - | chr5.1:3995443-3995462 | None:intergenic | 25.0% |
!!! | TATTTTGTCGTTGATTTTTC+CGG | - | chr5.1:3993548-3993567 | None:intergenic | 25.0% |
!!! | TTTGAAAAAGTCACTTTTTG+AGG | + | chr5.1:3996451-3996470 | MS.gene015570:CDS | 25.0% |
AAAATGCTAATACAGCTGAA+AGG | + | chr5.1:3995796-3995815 | MS.gene015570:CDS | 30.0% | |
AAACATTCGTTGTTGAAATG+TGG | + | chr5.1:3997297-3997316 | MS.gene015570:intron | 30.0% | |
AAAGAGATTAGAGAAAGCTA+CGG | + | chr5.1:3993453-3993472 | MS.gene015570:CDS | 30.0% | |
AAATTCTCTAGCTACCATTA+AGG | + | chr5.1:3995623-3995642 | MS.gene015570:CDS | 30.0% | |
AACAACTTCATCTATGAAGA+AGG | + | chr5.1:3996899-3996918 | MS.gene015570:CDS | 30.0% | |
AGAAATCTTAAGAACTGACT+TGG | + | chr5.1:3996214-3996233 | MS.gene015570:CDS | 30.0% | |
ATCATCTATGAAGAAGGAAA+AGG | + | chr5.1:3997095-3997114 | MS.gene015570:intron | 30.0% | |
ATGAGATGAGAAATTGTGTT+TGG | + | chr5.1:3993349-3993368 | MS.gene015570:intron | 30.0% | |
ATTGTAAAGGAAAGCAAAAG+AGG | + | chr5.1:3994874-3994893 | MS.gene015570:CDS | 30.0% | |
ATTTACATCAGAGATCACAA+TGG | + | chr5.1:3994662-3994681 | MS.gene015570:CDS | 30.0% | |
ATTTCAAGCAACTTTACATC+TGG | - | chr5.1:3993834-3993853 | None:intergenic | 30.0% | |
CAAGACTAAGTTTGTAATTC+AGG | - | chr5.1:3997066-3997085 | None:intergenic | 30.0% | |
CAATCTTGTATAACCAGAAA+TGG | - | chr5.1:3994021-3994040 | None:intergenic | 30.0% | |
CATCAATGATATGAAGACAT+AGG | + | chr5.1:3996714-3996733 | MS.gene015570:intron | 30.0% | |
CCTTAGGAAACAAATTGTAA+AGG | + | chr5.1:3994861-3994880 | MS.gene015570:CDS | 30.0% | |
CTCTTAAATGAACAAGTAGA+AGG | + | chr5.1:3996188-3996207 | MS.gene015570:CDS | 30.0% | |
GAAGGAAAGAAACAAATCAA+TGG | + | chr5.1:3997498-3997517 | MS.gene015570:CDS | 30.0% | |
GGAAATATCATCTATGAAGA+AGG | + | chr5.1:3997089-3997108 | MS.gene015570:intron | 30.0% | |
TACCTTTGATGAAAATGAGA+AGG | + | chr5.1:3995860-3995879 | MS.gene015570:CDS | 30.0% | |
TCCTCATCATTCAAAAGAAA+TGG | + | chr5.1:3996646-3996665 | MS.gene015570:CDS | 30.0% | |
TTCATCTATGAAGAAGGAAA+AGG | + | chr5.1:3996905-3996924 | MS.gene015570:CDS | 30.0% | |
TTGTAAAGGAAAGCAAAAGA+GGG | + | chr5.1:3994875-3994894 | MS.gene015570:CDS | 30.0% | |
TTTACATCAGAGATCACAAT+GGG | + | chr5.1:3994663-3994682 | MS.gene015570:CDS | 30.0% | |
TTTCAATAACATTTGCAGAG+AGG | + | chr5.1:3994084-3994103 | MS.gene015570:intron | 30.0% | |
! | ATATTTCAGGTGTTACAATC+AGG | + | chr5.1:3993379-3993398 | MS.gene015570:intron | 30.0% |
! | CCTTTACAATTTGTTTCCTA+AGG | - | chr5.1:3994864-3994883 | None:intergenic | 30.0% |
! | CTTTATTTCACTCTTTAGCT+GGG | - | chr5.1:3996513-3996532 | None:intergenic | 30.0% |
! | TATTTCAGGTGTTACAATCA+GGG | + | chr5.1:3993380-3993399 | MS.gene015570:intron | 30.0% |
! | TCTGAAACATTGTTACATCA+AGG | + | chr5.1:3996263-3996282 | MS.gene015570:CDS | 30.0% |
! | TCTTTATTTCACTCTTTAGC+TGG | - | chr5.1:3996514-3996533 | None:intergenic | 30.0% |
! | TGATGAAGATCAAAAAGCAT+TGG | + | chr5.1:3995284-3995303 | MS.gene015570:CDS | 30.0% |
! | TTTTAGATCCATCAGAAAGT+TGG | - | chr5.1:3996595-3996614 | None:intergenic | 30.0% |
!! | ATTACAAACTTAGTCTTGCT+TGG | + | chr5.1:3997068-3997087 | MS.gene015570:intron | 30.0% |
!! | CAAATTCAAAGGTACTACAA+AGG | + | chr5.1:3993975-3993994 | MS.gene015570:intron | 30.0% |
!! | CATTTCTGGTTATACAAGAT+TGG | + | chr5.1:3994019-3994038 | MS.gene015570:intron | 30.0% |
!! | GTTTGGTGATGTAATATTTC+AGG | + | chr5.1:3993366-3993385 | MS.gene015570:intron | 30.0% |
!! | TCTAATGTATTGGTTCTGTT+AGG | + | chr5.1:3993052-3993071 | MS.gene015570:intron | 30.0% |
!! | TGTATTAGCATTTTTCAGTC+TGG | - | chr5.1:3995790-3995809 | None:intergenic | 30.0% |
!!! | ATTTTTGGGTTTATATGCAG+GGG | + | chr5.1:3993659-3993678 | MS.gene015570:intron | 30.0% |
!!! | CATTTTTTTCTTGCATTCTC+TGG | - | chr5.1:3993953-3993972 | None:intergenic | 30.0% |
!!! | CTTGAGAGTTTTTTATGATG+TGG | + | chr5.1:3994052-3994071 | MS.gene015570:intron | 30.0% |
AACCCATATCAGAAGATTAG+AGG | + | chr5.1:3995653-3995672 | MS.gene015570:CDS | 35.0% | |
AAGAAATAGATTGGAACACG+CGG | + | chr5.1:3997435-3997454 | MS.gene015570:CDS | 35.0% | |
AAGAGATTCAGGGATAGTAA+CGG | + | chr5.1:3996563-3996582 | MS.gene015570:CDS | 35.0% | |
AATTCAGATACAGCAGATGT+TGG | + | chr5.1:3996037-3996056 | MS.gene015570:CDS | 35.0% | |
AATTCGATGATAAGAGCTCA+AGG | + | chr5.1:3994134-3994153 | MS.gene015570:CDS | 35.0% | |
AGAACTTGACAATGTAACGT+CGG | - | chr5.1:3994497-3994516 | None:intergenic | 35.0% | |
AGAGTTTCATCTCTAACTCT+TGG | - | chr5.1:3995245-3995264 | None:intergenic | 35.0% | |
AGTAAGCATTTCACTCATTC+AGG | + | chr5.1:3994210-3994229 | MS.gene015570:intron | 35.0% | |
AGTTAATAGGGATTTCTCTG+AGG | + | chr5.1:3996115-3996134 | MS.gene015570:CDS | 35.0% | |
ATAAACAACAGAACGTCTAG+TGG | + | chr5.1:3994469-3994488 | MS.gene015570:CDS | 35.0% | |
ATCCTGAACAACCAATTTGA+AGG | - | chr5.1:3997377-3997396 | None:intergenic | 35.0% | |
ATGGGGAAATCGAAATGTAT+AGG | + | chr5.1:3995376-3995395 | MS.gene015570:CDS | 35.0% | |
ATTGTTACATCAAGGAACTG+TGG | + | chr5.1:3996271-3996290 | MS.gene015570:CDS | 35.0% | |
CAAGGAAGAAAAAGAAGAAG+AGG | + | chr5.1:3996379-3996398 | MS.gene015570:CDS | 35.0% | |
CAATTCAATGCTACTAAGGT+AGG | + | chr5.1:3992905-3992924 | MS.gene015570:intron | 35.0% | |
CATTAACATGCCCTTCAAAT+TGG | + | chr5.1:3997363-3997382 | MS.gene015570:intron | 35.0% | |
CGAAACAGTCAAGTATTATC+AGG | + | chr5.1:3993513-3993532 | MS.gene015570:CDS | 35.0% | |
CTACAGAAAAATCTAGTGGA+AGG | + | chr5.1:3995921-3995940 | MS.gene015570:CDS | 35.0% | |
CTCCTCTAATCTTCTGATAT+GGG | - | chr5.1:3995658-3995677 | None:intergenic | 35.0% | |
CTCTGATGTAAATCATGCAT+CGG | - | chr5.1:3994655-3994674 | None:intergenic | 35.0% | |
GAATCTGGAAAAAGAACTCA+AGG | + | chr5.1:3995581-3995600 | MS.gene015570:CDS | 35.0% | |
GAGATGGAAAAACAAGTACA+GGG | + | chr5.1:3995678-3995697 | MS.gene015570:CDS | 35.0% | |
GAGTTTCATCTCTAACTCTT+GGG | - | chr5.1:3995244-3995263 | None:intergenic | 35.0% | |
GCAAGAATCAAATGCTGAAT+TGG | + | chr5.1:3995122-3995141 | MS.gene015570:CDS | 35.0% | |
GCTTCAATTCAATGCTACTA+AGG | + | chr5.1:3992901-3992920 | MS.gene015570:CDS | 35.0% | |
GCTTTCTCTAATCTCTTTGT+TGG | - | chr5.1:3993451-3993470 | None:intergenic | 35.0% | |
GGAAATCGAAATGTATAGGA+GGG | + | chr5.1:3995380-3995399 | MS.gene015570:CDS | 35.0% | |
TAAACAACAGAACGTCTAGT+GGG | + | chr5.1:3994470-3994489 | MS.gene015570:CDS | 35.0% | |
TACAAGAGAAAACAGCATTC+AGG | - | chr5.1:3996768-3996787 | None:intergenic | 35.0% | |
TAGACTATTGAAGTCAGAGT+TGG | + | chr5.1:3996403-3996422 | MS.gene015570:CDS | 35.0% | |
TATTATCAGGATCCAAAGAC+CGG | + | chr5.1:3993526-3993545 | MS.gene015570:CDS | 35.0% | |
TCCTGAACAACCAATTTGAA+GGG | - | chr5.1:3997376-3997395 | None:intergenic | 35.0% | |
TCGAAAATCAGAAGAAGCTT+GGG | + | chr5.1:3996087-3996106 | MS.gene015570:CDS | 35.0% | |
TGAAACTCACATTGAGAATC+TGG | + | chr5.1:3995566-3995585 | MS.gene015570:CDS | 35.0% | |
TGAAGCTGATATAGAAGCAA+TGG | + | chr5.1:3995704-3995723 | MS.gene015570:CDS | 35.0% | |
TGAAGTTGTTGAACTTTCCA+AGG | - | chr5.1:3996889-3996908 | None:intergenic | 35.0% | |
TGTTTAACTGTTCCTGCAAT+TGG | - | chr5.1:3995503-3995522 | None:intergenic | 35.0% | |
TGTTTCGTTCTTCAAAATGG+AGG | + | chr5.1:3992846-3992865 | MS.gene015570:CDS | 35.0% | |
TTCCTTCAATGACGACAATT+CGG | - | chr5.1:3997485-3997504 | None:intergenic | 35.0% | |
TTGTCTGATTTCTTCGACAA+AGG | - | chr5.1:3995046-3995065 | None:intergenic | 35.0% | |
! | AAACCAGTTTGTTCCAGTTA+TGG | + | chr5.1:3994585-3994604 | MS.gene015570:CDS | 35.0% |
! | AGCCTTCTCATTTTCATCAA+AGG | - | chr5.1:3995865-3995884 | None:intergenic | 35.0% |
! | AGTTTGTAATTCAGGTTTCG+TGG | - | chr5.1:3997058-3997077 | None:intergenic | 35.0% |
! | ATTTCAGGTGTTACAATCAG+GGG | + | chr5.1:3993381-3993400 | MS.gene015570:intron | 35.0% |
! | CAGTTTCCTTTGACTTTATC+AGG | - | chr5.1:3996866-3996885 | None:intergenic | 35.0% |
! | CGTTCTGTTGTTTATTGCTT+TGG | - | chr5.1:3994464-3994483 | None:intergenic | 35.0% |
! | GCCATTTCTTTTGAATGATG+AGG | - | chr5.1:3996650-3996669 | None:intergenic | 35.0% |
! | GTTCAGTTTTACCTCGTAAT+TGG | - | chr5.1:3995988-3996007 | None:intergenic | 35.0% |
! | TTCTTTTGAATGATGAGGAC+TGG | - | chr5.1:3996645-3996664 | None:intergenic | 35.0% |
!! | AAAGGTACTACAAAGGGAAT+TGG | + | chr5.1:3993982-3994001 | MS.gene015570:intron | 35.0% |
!! | ATGGGTTTCTAGTACCTTAA+TGG | - | chr5.1:3995640-3995659 | None:intergenic | 35.0% |
!!! | AAAGTCACTTTTTGAGGATG+AGG | + | chr5.1:3996457-3996476 | MS.gene015570:CDS | 35.0% |
AAAGTCAAAGGAAACTGCCT+TGG | + | chr5.1:3996869-3996888 | MS.gene015570:CDS | 40.0% | |
AAATTGTCGGTGGGAGAATT+CGG | + | chr5.1:3993486-3993505 | MS.gene015570:CDS | 40.0% | |
AATGAGTCTCAAATTTGCCG+AGG | + | chr5.1:3997558-3997577 | MS.gene015570:CDS | 40.0% | |
AATGGAGGAGTGAGAAGAAT+AGG | + | chr5.1:3992861-3992880 | MS.gene015570:CDS | 40.0% | |
AATGTATAGGAGGGACAAAG+AGG | + | chr5.1:3995389-3995408 | MS.gene015570:CDS | 40.0% | |
AGACAGAATGTGACAATGTC+AGG | + | chr5.1:3994950-3994969 | MS.gene015570:CDS | 40.0% | |
AGCTTGGGGAACAAGTTAAT+AGG | + | chr5.1:3996102-3996121 | MS.gene015570:CDS | 40.0% | |
AGTATGGGCGATTCAACAAA+CGG | + | chr5.1:3994715-3994734 | MS.gene015570:CDS | 40.0% | |
ATCACCATGAGAATTCCTGA+TGG | - | chr5.1:3993770-3993789 | None:intergenic | 40.0% | |
ATCCTGTTATGCAGAGAAAC+AGG | - | chr5.1:3994434-3994453 | None:intergenic | 40.0% | |
CACAATTGCGTCATTGAAGA+AGG | + | chr5.1:3996313-3996332 | MS.gene015570:CDS | 40.0% | |
CCATATCAGAAGATTAGAGG+AGG | + | chr5.1:3995656-3995675 | MS.gene015570:CDS | 40.0% | |
CCTCCTCTAATCTTCTGATA+TGG | - | chr5.1:3995659-3995678 | None:intergenic | 40.0% | |
CGAAAATCAGAAGAAGCTTG+GGG | + | chr5.1:3996088-3996107 | MS.gene015570:CDS | 40.0% | |
CGGTTCAAGATGGAAATTGT+CGG | + | chr5.1:3993473-3993492 | MS.gene015570:CDS | 40.0% | |
CTAGCTTATGTACAAGCTTG+TGG | - | chr5.1:3995473-3995492 | None:intergenic | 40.0% | |
CTCAAACAAGTGTGTCTCTT+TGG | - | chr5.1:3995337-3995356 | None:intergenic | 40.0% | |
CTCGAAAATCAGAAGAAGCT+TGG | + | chr5.1:3996086-3996105 | MS.gene015570:CDS | 40.0% | |
GACACTCTTGAGGTTTCTTA+CGG | - | chr5.1:3997614-3997633 | None:intergenic | 40.0% | |
GATAGATTGCGTACTGAGTA+AGG | - | chr5.1:3994329-3994348 | None:intergenic | 40.0% | |
GCGTCTACAGAAAAATCTAG+TGG | + | chr5.1:3995917-3995936 | MS.gene015570:CDS | 40.0% | |
GCTTGGGGAACAAGTTAATA+GGG | + | chr5.1:3996103-3996122 | MS.gene015570:CDS | 40.0% | |
GGAGATGGAAAAACAAGTAC+AGG | + | chr5.1:3995677-3995696 | MS.gene015570:CDS | 40.0% | |
GGGAAATCGAAATGTATAGG+AGG | + | chr5.1:3995379-3995398 | MS.gene015570:CDS | 40.0% | |
GTCAACTAAAGCCAATTACG+AGG | + | chr5.1:3995974-3995993 | MS.gene015570:CDS | 40.0% | |
GTCTAAACATTCCAATGGAC+AGG | + | chr5.1:3995203-3995222 | MS.gene015570:CDS | 40.0% | |
TAGTTGACTGAAGCTCTTCT+TGG | - | chr5.1:3995962-3995981 | None:intergenic | 40.0% | |
TCAAGATGGAAATTGTCGGT+GGG | + | chr5.1:3993477-3993496 | MS.gene015570:CDS | 40.0% | |
TCAAGGAACCAATTCAGCAA+CGG | + | chr5.1:3994151-3994170 | MS.gene015570:CDS | 40.0% | |
TCAATAGTTCCTGGTGACAT+TGG | + | chr5.1:3993421-3993440 | MS.gene015570:CDS | 40.0% | |
TCAATGTCATTCATAGCAGC+AGG | - | chr5.1:3995549-3995568 | None:intergenic | 40.0% | |
TCACCATGAGAATTCCTGAT+GGG | - | chr5.1:3993769-3993788 | None:intergenic | 40.0% | |
TCATTTGCATTGAGAGTCTC+TGG | - | chr5.1:3995836-3995855 | None:intergenic | 40.0% | |
TTCAAGATGGAAATTGTCGG+TGG | + | chr5.1:3993476-3993495 | MS.gene015570:CDS | 40.0% | |
TTCTCAAAATGCCCTTTCCA+AGG | + | chr5.1:3994738-3994757 | MS.gene015570:CDS | 40.0% | |
TTGGGAACTTTCCTTGGAAA+GGG | - | chr5.1:3994752-3994771 | None:intergenic | 40.0% | |
TTTATCGTGTTCCTGTCCAT+TGG | - | chr5.1:3995217-3995236 | None:intergenic | 40.0% | |
TTTCTCAGTCCAATTTCGCA+GGG | - | chr5.1:3994544-3994563 | None:intergenic | 40.0% | |
! | AGCATTGGATGATCTTGTCA+AGG | + | chr5.1:3995299-3995318 | MS.gene015570:CDS | 40.0% |
! | CAGCATTGAGAAGAGATTCA+GGG | + | chr5.1:3996553-3996572 | MS.gene015570:CDS | 40.0% |
! | TCAGAACGTTACTTTACACG+AGG | + | chr5.1:3996977-3996996 | MS.gene015570:CDS | 40.0% |
! | TTCCTGTTTCTCTGCATAAC+AGG | + | chr5.1:3994429-3994448 | MS.gene015570:intron | 40.0% |
! | TTTTCTCAGTCCAATTTCGC+AGG | - | chr5.1:3994545-3994564 | None:intergenic | 40.0% |
!! | AAACCTCAAGAGTGTCCATA+AGG | + | chr5.1:3997618-3997637 | MS.gene015570:CDS | 40.0% |
!! | AACCTCAAGAGTGTCCATAA+GGG | + | chr5.1:3997619-3997638 | MS.gene015570:CDS | 40.0% |
!! | AACTGGAACAAACTGGTTTG+TGG | - | chr5.1:3994584-3994603 | None:intergenic | 40.0% |
!! | ATTGGTTCTGTTAGGTTCTG+AGG | + | chr5.1:3993060-3993079 | MS.gene015570:intron | 40.0% |
!! | TTGGTGTTGTCAATAGTTCC+TGG | + | chr5.1:3993412-3993431 | MS.gene015570:CDS | 40.0% |
!! | TTGGTTCTGTTAGGTTCTGA+GGG | + | chr5.1:3993061-3993080 | MS.gene015570:intron | 40.0% |
!!! | CTTCTGATTTTCGAGTTGCA+TGG | - | chr5.1:3996081-3996100 | None:intergenic | 40.0% |
!!! | TCGTTGATTTTTCCGGTCTT+TGG | - | chr5.1:3993541-3993560 | None:intergenic | 40.0% |
AAAGGAAAGCAAAAGAGGGC+AGG | + | chr5.1:3994879-3994898 | MS.gene015570:CDS | 45.0% | |
AACAGGTCACAGTTGGAAAG+TGG | + | chr5.1:3995009-3995028 | MS.gene015570:CDS | 45.0% | |
ACAATCAGGGGTAGATGCAT+TGG | + | chr5.1:3993393-3993412 | MS.gene015570:CDS | 45.0% | |
ACATGGAACTACAGACCCTT+AGG | + | chr5.1:3994845-3994864 | MS.gene015570:CDS | 45.0% | |
ACGATGCCAAAGTGAGAAAC+AGG | + | chr5.1:3994992-3995011 | MS.gene015570:CDS | 45.0% | |
AGTGAGAAACAGGTCACAGT+TGG | + | chr5.1:3995002-3995021 | MS.gene015570:CDS | 45.0% | |
ATGGGAAGAGAGACATGAGA+GGG | - | chr5.1:3993751-3993770 | None:intergenic | 45.0% | |
ATGTCATTCATAGCAGCAGG+CGG | - | chr5.1:3995546-3995565 | None:intergenic | 45.0% | |
CAAATCTGAACTCGCTGCTT+TGG | + | chr5.1:3994801-3994820 | MS.gene015570:CDS | 45.0% | |
CAGAAGATTAGAGGAGGAGA+TGG | + | chr5.1:3995662-3995681 | MS.gene015570:CDS | 45.0% | |
CCTGAATCTCTTCTCAATGC+TGG | - | chr5.1:3996555-3996574 | None:intergenic | 45.0% | |
CTTCCCATCAGGAATTCTCA+TGG | + | chr5.1:3993763-3993782 | MS.gene015570:CDS | 45.0% | |
CTTGGGAACTTTCCTTGGAA+AGG | - | chr5.1:3994753-3994772 | None:intergenic | 45.0% | |
GACCGAATTGTCGTCATTGA+AGG | + | chr5.1:3997480-3997499 | MS.gene015570:CDS | 45.0% | |
GAGAAAGCTACGGTTCAAGA+TGG | + | chr5.1:3993463-3993482 | MS.gene015570:CDS | 45.0% | |
GAGTCTCTCCATCTCCAAAT+GGG | - | chr5.1:3994782-3994801 | None:intergenic | 45.0% | |
GCCCTTCAAATTGGTTGTTC+AGG | + | chr5.1:3997372-3997391 | MS.gene015570:intron | 45.0% | |
GCGGAGATGAACACTCATAT+TGG | - | chr5.1:3995527-3995546 | None:intergenic | 45.0% | |
GGAACTTCAGAGCAGAATTG+TGG | + | chr5.1:3996926-3996945 | MS.gene015570:CDS | 45.0% | |
GTTGATACTCCCTGCGAAAT+TGG | + | chr5.1:3994532-3994551 | MS.gene015570:CDS | 45.0% | |
TACAGCTGAAAGGCTTCAAG+AGG | + | chr5.1:3995806-3995825 | MS.gene015570:CDS | 45.0% | |
TAGACGCAGTTCACTTGCTT+CGG | - | chr5.1:3995904-3995923 | None:intergenic | 45.0% | |
TCAGAGCTCGGGTTAAGTAT+GGG | + | chr5.1:3994700-3994719 | MS.gene015570:CDS | 45.0% | |
TCAGATACAGCAGATGTTGG+TGG | + | chr5.1:3996040-3996059 | MS.gene015570:CDS | 45.0% | |
TCAGGGCCTGATAAAGTCAA+AGG | + | chr5.1:3996857-3996876 | MS.gene015570:intron | 45.0% | |
TGAGTCTCTCCATCTCCAAA+TGG | - | chr5.1:3994783-3994802 | None:intergenic | 45.0% | |
TGCGTCATTGAAGAAGGAAG+CGG | + | chr5.1:3996319-3996338 | MS.gene015570:CDS | 45.0% | |
TTATCAAAAGCTAGCGCGGT+CGG | + | chr5.1:3993682-3993701 | MS.gene015570:CDS | 45.0% | |
TTCCAAGGAAAGTTCCCAAG+AGG | + | chr5.1:3994753-3994772 | MS.gene015570:CDS | 45.0% | |
TTGTCTTTCACCTTCGACCT+CGG | - | chr5.1:3997578-3997597 | None:intergenic | 45.0% | |
! | CCAGCATTGAGAAGAGATTC+AGG | + | chr5.1:3996552-3996571 | MS.gene015570:CDS | 45.0% |
! | CTGTGACCTGTTTCTCACTT+TGG | - | chr5.1:3995001-3995020 | None:intergenic | 45.0% |
! | GAGGCATTAACAGCAGCATT+TGG | - | chr5.1:3994628-3994647 | None:intergenic | 45.0% |
! | TCAAGTTCTGATGACAGCTC+TGG | + | chr5.1:3994508-3994527 | MS.gene015570:CDS | 45.0% |
!! | GAACAAACTGGTTTGTGGTG+GGG | - | chr5.1:3994579-3994598 | None:intergenic | 45.0% |
!! | GGAACAAACTGGTTTGTGGT+GGG | - | chr5.1:3994580-3994599 | None:intergenic | 45.0% |
!! | TAAATCATGCATCGGTGTCG+AGG | - | chr5.1:3994647-3994666 | None:intergenic | 45.0% |
!! | TGGAACAAACTGGTTTGTGG+TGG | - | chr5.1:3994581-3994600 | None:intergenic | 45.0% |
!! | AAAAAAACTATTATTAATAA+AGG | - | chr5.1:3993160-3993179 | None:intergenic | 5.0% |
AAGAGGGCAGGATCTCATGA+AGG | + | chr5.1:3994891-3994910 | MS.gene015570:CDS | 50.0% | |
AGAACTCAAGGAGCAGTCAG+AGG | + | chr5.1:3995593-3995612 | MS.gene015570:CDS | 50.0% | |
AGAGACATGAGAGGGCTTTG+TGG | - | chr5.1:3993743-3993762 | None:intergenic | 50.0% | |
AGCAGCATTTGGAGATTCCG+CGG | - | chr5.1:3994617-3994636 | None:intergenic | 50.0% | |
AGCCCTTATGGACACTCTTG+AGG | - | chr5.1:3997624-3997643 | None:intergenic | 50.0% | |
CAGGTCTTTCCACAAACGCA+TGG | + | chr5.1:3994969-3994988 | MS.gene015570:CDS | 50.0% | |
CTCAAATTTGCCGAGGTCGA+AGG | + | chr5.1:3997565-3997584 | MS.gene015570:CDS | 50.0% | |
CTCAGAGCTCGGGTTAAGTA+TGG | + | chr5.1:3994699-3994718 | MS.gene015570:CDS | 50.0% | |
CTCATGTCTCTCTTCCCATC+AGG | + | chr5.1:3993752-3993771 | MS.gene015570:CDS | 50.0% | |
CTCCAAATGGGATGCCTCTT+GGG | - | chr5.1:3994770-3994789 | None:intergenic | 50.0% | |
CTGTATCGCCGTTGCTGAAT+TGG | - | chr5.1:3994162-3994181 | None:intergenic | 50.0% | |
GAACACGCGGACAATAGTCT+TGG | + | chr5.1:3997448-3997467 | MS.gene015570:CDS | 50.0% | |
GATGGGAAGAGAGACATGAG+AGG | - | chr5.1:3993752-3993771 | None:intergenic | 50.0% | |
GCTAGAGCAAAGCCAATTGC+AGG | + | chr5.1:3995488-3995507 | MS.gene015570:CDS | 50.0% | |
GGACGCAACCAACTTTCTGA+TGG | + | chr5.1:3996584-3996603 | MS.gene015570:CDS | 50.0% | |
GGGCCATAACTGGAACAAAC+TGG | - | chr5.1:3994591-3994610 | None:intergenic | 50.0% | |
GGGGTTATCAAAAGCTAGCG+CGG | + | chr5.1:3993678-3993697 | MS.gene015570:intron | 50.0% | |
GGTCTTTCGCAATGCTTCCT+CGG | - | chr5.1:3995769-3995788 | None:intergenic | 50.0% | |
TATCAAAAGCTAGCGCGGTC+GGG | + | chr5.1:3993683-3993702 | MS.gene015570:CDS | 50.0% | |
TCAGAGCAGAATTGTGGAGC+TGG | + | chr5.1:3996932-3996951 | MS.gene015570:CDS | 50.0% | |
TCTCCAAATGGGATGCCTCT+TGG | - | chr5.1:3994771-3994790 | None:intergenic | 50.0% | |
TCTGCTCCAACATCTCTTCC+AGG | - | chr5.1:3995164-3995183 | None:intergenic | 50.0% | |
TGCCTCTTGGGAACTTTCCT+TGG | - | chr5.1:3994758-3994777 | None:intergenic | 50.0% | |
TGCTTCGGTCAATGCTCTCA+TGG | - | chr5.1:3995889-3995908 | None:intergenic | 50.0% | |
TGTGGAGCTGGAGAACAAAG+TGG | + | chr5.1:3996944-3996963 | MS.gene015570:CDS | 50.0% | |
! | TCGTCATCTAGCTCAGAGCT+CGG | + | chr5.1:3994688-3994707 | MS.gene015570:CDS | 50.0% |
! | TGAATTGGTTCTTGCCGTGC+AGG | + | chr5.1:3995137-3995156 | MS.gene015570:CDS | 50.0% |
!! | AGAGGCATCCCATTTGGAGA+TGG | + | chr5.1:3994771-3994790 | MS.gene015570:CDS | 50.0% |
!! | GTTGGTCTTCCAATGTCACC+AGG | - | chr5.1:3993433-3993452 | None:intergenic | 50.0% |
!! | TTCCCAAGAGGCATCCCATT+TGG | + | chr5.1:3994765-3994784 | MS.gene015570:CDS | 50.0% |
ATCAAAAGCTAGCGCGGTCG+GGG | + | chr5.1:3993684-3993703 | MS.gene015570:CDS | 55.0% | |
ATTTGGAGATTCCGCGGCAC+GGG | - | chr5.1:3994611-3994630 | None:intergenic | 55.0% | |
CATCTCTTCCAGGTCCTGCA+CGG | - | chr5.1:3995154-3995173 | None:intergenic | 55.0% | |
CATTTGGAGATTCCGCGGCA+CGG | - | chr5.1:3994612-3994631 | None:intergenic | 55.0% | |
GCAGGACCTGGAAGAGATGT+TGG | + | chr5.1:3995155-3995174 | MS.gene015570:CDS | 55.0% | |
GGAGCTGGAGAACAAAGTGG+AGG | + | chr5.1:3996947-3996966 | MS.gene015570:CDS | 55.0% | |
TGGCATCGTCCATGCGTTTG+TGG | - | chr5.1:3994981-3995000 | None:intergenic | 55.0% | |
TTCGCAATGCTTCCTCGGCT+TGG | - | chr5.1:3995764-3995783 | None:intergenic | 55.0% | |
! | CACGCGGACAATAGTCTTGG+TGG | + | chr5.1:3997451-3997470 | MS.gene015570:CDS | 55.0% |
! | CGTCATCTAGCTCAGAGCTC+GGG | + | chr5.1:3994689-3994708 | MS.gene015570:CDS | 55.0% |
!! | CAATGCTTCCTCGGCTTGGA+TGG | - | chr5.1:3995760-3995779 | None:intergenic | 55.0% |
GCAAAGAGCCATCCAAGCCG+AGG | + | chr5.1:3995749-3995768 | MS.gene015570:CDS | 60.0% | |
GCACGTGGATGTGTCGGACA+TGG | + | chr5.1:3994828-3994847 | MS.gene015570:CDS | 60.0% | |
! | CTGAACTCGCTGCTTTGGCG+AGG | + | chr5.1:3994806-3994825 | MS.gene015570:CDS | 60.0% |
GGCGAGGCACGTGGATGTGT+CGG | + | chr5.1:3994822-3994841 | MS.gene015570:CDS | 65.0% | |
GGTTCTTGCCGTGCAGGACC+TGG | + | chr5.1:3995143-3995162 | MS.gene015570:CDS | 65.0% | |
TCCAGTTATGGCCCGTGCCG+CGG | + | chr5.1:3994597-3994616 | MS.gene015570:CDS | 65.0% | |
TCCGCGGCACGGGCCATAAC+TGG | - | chr5.1:3994601-3994620 | None:intergenic | 70.0% | |
! | CGCTGCTTTGGCGAGGCACG+TGG | + | chr5.1:3994813-3994832 | MS.gene015570:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 3992845 | 3997645 | 3992845 | ID=MS.gene015570 |
chr5.1 | mRNA | 3992845 | 3997645 | 3992845 | ID=MS.gene015570.t1;Parent=MS.gene015570 |
chr5.1 | exon | 3992845 | 3992922 | 3992845 | ID=MS.gene015570.t1.exon1;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3992845 | 3992922 | 3992845 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
chr5.1 | exon | 3993388 | 3993588 | 3993388 | ID=MS.gene015570.t1.exon2;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3993388 | 3993588 | 3993388 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
chr5.1 | exon | 3993679 | 3993801 | 3993679 | ID=MS.gene015570.t1.exon3;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3993679 | 3993801 | 3993679 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
chr5.1 | exon | 3993942 | 3993985 | 3993942 | ID=MS.gene015570.t1.exon4;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3993942 | 3993985 | 3993942 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
chr5.1 | exon | 3994102 | 3994210 | 3994102 | ID=MS.gene015570.t1.exon5;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3994102 | 3994210 | 3994102 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
chr5.1 | exon | 3994451 | 3996700 | 3994451 | ID=MS.gene015570.t1.exon6;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3994451 | 3996700 | 3994451 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
chr5.1 | exon | 3996861 | 3996998 | 3996861 | ID=MS.gene015570.t1.exon7;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3996861 | 3996998 | 3996861 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
chr5.1 | exon | 3997394 | 3997645 | 3997394 | ID=MS.gene015570.t1.exon8;Parent=MS.gene015570.t1 |
chr5.1 | CDS | 3997394 | 3997645 | 3997394 | ID=cds.MS.gene015570.t1;Parent=MS.gene015570.t1 |
Gene Sequence |
Protein sequence |