Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070339.t1 | XP_013447020.2 | 86.7 | 971 | 110 | 2 | 1 | 960 | 26 | 988 | 0.00E+00 | 1132.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070339.t1 | A0A396GWY6 | 86.7 | 971 | 110 | 2 | 1 | 960 | 26 | 988 | 0.0e+00 | 1132.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene070339 | 0.80848 | 3.03E-50 | -1.69E-46 |
| MS.gene049227 | MS.gene070339 | 0.801642 | 8.18E-49 | -1.69E-46 |
| MS.gene049328 | MS.gene070339 | 0.801103 | 1.05E-48 | -1.69E-46 |
| MS.gene049350 | MS.gene070339 | 0.811814 | 5.80E-51 | -1.69E-46 |
| MS.gene049418 | MS.gene070339 | 0.811755 | 5.97E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene070339 | 0.840414 | 8.82E-58 | -1.69E-46 |
| MS.gene049887 | MS.gene070339 | 0.855703 | 5.28E-62 | -1.69E-46 |
| MS.gene050551 | MS.gene070339 | 0.817172 | 3.78E-52 | -1.69E-46 |
| MS.gene050630 | MS.gene070339 | 0.811328 | 7.40E-51 | -1.69E-46 |
| MS.gene050657 | MS.gene070339 | 0.802494 | 5.46E-49 | -1.69E-46 |
| MS.gene051021 | MS.gene070339 | 0.849685 | 2.76E-60 | -1.69E-46 |
| MS.gene051029 | MS.gene070339 | 0.801866 | 7.36E-49 | -1.69E-46 |
| MS.gene051067 | MS.gene070339 | 0.818814 | 1.61E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene070339 | 0.811758 | 5.97E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene070339 | 0.802628 | 5.13E-49 | -1.69E-46 |
| MS.gene051664 | MS.gene070339 | 0.800976 | 1.12E-48 | -1.69E-46 |
| MS.gene051671 | MS.gene070339 | 0.80243 | 5.63E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene070339 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene070339 | 0.834637 | 2.67E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene070339 | 0.836242 | 1.05E-56 | -1.69E-46 |
| MS.gene051885 | MS.gene070339 | 0.838282 | 3.16E-57 | -1.69E-46 |
| MS.gene052133 | MS.gene070339 | 0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene05224 | MS.gene070339 | 0.806922 | 6.50E-50 | -1.69E-46 |
| MS.gene052514 | MS.gene070339 | 0.807551 | 4.78E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene070339 | 0.824669 | 7.12E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene070339 | 0.812382 | 4.36E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene070339 | 0.835947 | 1.25E-56 | -1.69E-46 |
| MS.gene052731 | MS.gene070339 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene052732 | MS.gene070339 | 0.891098 | 5.41E-74 | -1.69E-46 |
| MS.gene053079 | MS.gene070339 | 0.811396 | 7.15E-51 | -1.69E-46 |
| MS.gene053122 | MS.gene070339 | 0.806259 | 8.97E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene070339 | 0.822438 | 2.37E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene070339 | 0.897056 | 2.04E-76 | -1.69E-46 |
| MS.gene053171 | MS.gene070339 | 0.837291 | 5.67E-57 | -1.69E-46 |
| MS.gene053174 | MS.gene070339 | 0.827908 | 1.21E-54 | -1.69E-46 |
| MS.gene053536 | MS.gene070339 | 0.839196 | 1.83E-57 | -1.69E-46 |
| MS.gene053538 | MS.gene070339 | 0.833057 | 6.64E-56 | -1.69E-46 |
| MS.gene053581 | MS.gene070339 | 0.844375 | 7.86E-59 | -1.69E-46 |
| MS.gene054550 | MS.gene070339 | 0.834694 | 2.58E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene070339 | 0.8084 | 3.15E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene070339 | 0.900238 | 8.94E-78 | -1.69E-46 |
| MS.gene054824 | MS.gene070339 | 0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene070339 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene070339 | 0.887538 | 1.31E-72 | -1.69E-46 |
| MS.gene055466 | MS.gene070339 | 0.861756 | 8.20E-64 | -1.69E-46 |
| MS.gene055467 | MS.gene070339 | 0.818476 | 1.92E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene070339 | 0.876903 | 9.64E-69 | -1.69E-46 |
| MS.gene055469 | MS.gene070339 | 0.88457 | 1.71E-71 | -1.69E-46 |
| MS.gene055537 | MS.gene070339 | 0.886408 | 3.51E-72 | -1.69E-46 |
| MS.gene055580 | MS.gene070339 | -0.88384 | 3.19E-71 | -1.69E-46 |
| MS.gene055764 | MS.gene070339 | 0.840476 | 8.50E-58 | -1.69E-46 |
| MS.gene055861 | MS.gene070339 | -0.804899 | 1.73E-49 | -1.69E-46 |
| MS.gene055890 | MS.gene070339 | 0.823245 | 1.54E-53 | -1.69E-46 |
| MS.gene055891 | MS.gene070339 | 0.869108 | 3.96E-66 | -1.69E-46 |
| MS.gene055975 | MS.gene070339 | 0.806193 | 9.26E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene070339 | -0.876929 | 9.44E-69 | -1.69E-46 |
| MS.gene056308 | MS.gene070339 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene056398 | MS.gene070339 | 0.834452 | 2.97E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene070339 | 0.808974 | 2.38E-50 | -1.69E-46 |
| MS.gene057082 | MS.gene070339 | 0.810489 | 1.12E-50 | -1.69E-46 |
| MS.gene057294 | MS.gene070339 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene057557 | MS.gene070339 | 0.806074 | 9.82E-50 | -1.69E-46 |
| MS.gene058087 | MS.gene070339 | 0.858729 | 6.75E-63 | -1.69E-46 |
| MS.gene058492 | MS.gene070339 | 0.813822 | 2.11E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene070339 | 0.822807 | 1.94E-53 | -1.69E-46 |
| MS.gene058668 | MS.gene070339 | 0.841524 | 4.51E-58 | -1.69E-46 |
| MS.gene058720 | MS.gene070339 | 0.838808 | 2.31E-57 | -1.69E-46 |
| MS.gene058852 | MS.gene070339 | 0.814758 | 1.31E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene070339 | 0.817994 | 2.47E-52 | -1.69E-46 |
| MS.gene059424 | MS.gene070339 | 0.825297 | 5.06E-54 | -1.69E-46 |
| MS.gene059426 | MS.gene070339 | 0.844042 | 9.65E-59 | -1.69E-46 |
| MS.gene059570 | MS.gene070339 | 0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene070339 | 0.803203 | 3.90E-49 | -1.69E-46 |
| MS.gene060213 | MS.gene070339 | 0.817418 | 3.33E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene070339 | 0.804442 | 2.16E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene070339 | 0.830395 | 3.01E-55 | -1.69E-46 |
| MS.gene060603 | MS.gene070339 | 0.803475 | 3.42E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene070339 | 0.820969 | 5.18E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene070339 | 0.81627 | 6.03E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070339 | MS.gene043158 | PPI |
| MS.gene43975 | MS.gene070339 | PPI |
| MS.gene073110 | MS.gene070339 | PPI |
| MS.gene91501 | MS.gene070339 | PPI |
| MS.gene93911 | MS.gene070339 | PPI |
| MS.gene67841 | MS.gene070339 | PPI |
| MS.gene93915 | MS.gene070339 | PPI |
| MS.gene058289 | MS.gene070339 | PPI |
| MS.gene036437 | MS.gene070339 | PPI |
| MS.gene033776 | MS.gene070339 | PPI |
| MS.gene93913 | MS.gene070339 | PPI |
| MS.gene070339 | MS.gene005105 | PPI |
| MS.gene49082 | MS.gene070339 | PPI |
| MS.gene006300 | MS.gene070339 | PPI |
| MS.gene34485 | MS.gene070339 | PPI |
| MS.gene00106 | MS.gene070339 | PPI |
| MS.gene070339 | MS.gene35346 | PPI |
| MS.gene94379 | MS.gene070339 | PPI |
| MS.gene070339 | MS.gene94636 | PPI |
| MS.gene55940 | MS.gene070339 | PPI |
| MS.gene48616 | MS.gene070339 | PPI |
| MS.gene41427 | MS.gene070339 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070339.t1 | MTR_8g097350 | 88.590 | 1078 | 41 | 6 | 1 | 1067 | 26 | 1032 | 0.0 | 1840 |
| MS.gene070339.t1 | MTR_8g097350 | 94.351 | 956 | 35 | 2 | 1 | 945 | 26 | 973 | 0.0 | 1777 |
| MS.gene070339.t1 | MTR_5g010520 | 61.805 | 1097 | 328 | 10 | 1 | 1067 | 27 | 1062 | 0.0 | 1204 |
| MS.gene070339.t1 | MTR_5g010520 | 63.480 | 931 | 289 | 8 | 1 | 901 | 27 | 936 | 0.0 | 1064 |
| MS.gene070339.t1 | MTR_0415s0020 | 97.239 | 326 | 9 | 0 | 519 | 844 | 16 | 341 | 0.0 | 624 |
| MS.gene070339.t1 | MTR_0415s0010 | 93.377 | 302 | 12 | 1 | 147 | 448 | 1 | 294 | 0.0 | 546 |
| MS.gene070339.t1 | MTR_1g100633 | 36.694 | 744 | 375 | 12 | 7 | 730 | 30 | 697 | 4.16e-124 | 399 |
| MS.gene070339.t1 | MTR_1g100633 | 36.694 | 744 | 375 | 12 | 7 | 730 | 30 | 697 | 5.98e-124 | 398 |
| MS.gene070339.t1 | MTR_1g100633 | 36.694 | 744 | 375 | 12 | 7 | 730 | 30 | 697 | 2.76e-123 | 398 |
| MS.gene070339.t1 | MTR_1g100633 | 70.909 | 55 | 16 | 0 | 1012 | 1066 | 798 | 852 | 1.22e-15 | 82.4 |
| MS.gene070339.t1 | MTR_1g062200 | 26.136 | 440 | 268 | 13 | 5 | 420 | 31 | 437 | 2.03e-20 | 98.2 |
| MS.gene070339.t1 | MTR_1g062200 | 26.136 | 440 | 268 | 13 | 5 | 420 | 31 | 437 | 2.23e-20 | 98.2 |
| MS.gene070339.t1 | MTR_1g090807 | 23.629 | 474 | 301 | 14 | 2 | 443 | 52 | 496 | 4.35e-16 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070339.t1 | AT1G63300 | 44.323 | 1101 | 477 | 19 | 3 | 1067 | 29 | 1029 | 0.0 | 746 |
| MS.gene070339.t1 | AT5G41140 | 43.108 | 1081 | 467 | 17 | 1 | 1066 | 28 | 975 | 0.0 | 725 |
| MS.gene070339.t1 | AT5G41140 | 43.571 | 1081 | 469 | 18 | 1 | 1066 | 28 | 982 | 0.0 | 723 |
| MS.gene070339.t1 | AT5G52280 | 34.432 | 880 | 421 | 18 | 8 | 866 | 32 | 776 | 9.66e-116 | 378 |
| MS.gene070339.t1 | AT5G52280 | 62.712 | 59 | 22 | 0 | 1008 | 1066 | 794 | 852 | 2.18e-13 | 75.1 |
| MS.gene070339.t1 | AT1G22060 | 25.052 | 966 | 529 | 33 | 1 | 893 | 27 | 870 | 6.25e-33 | 139 |
| MS.gene070339.t1 | AT1G22060 | 52.542 | 59 | 28 | 0 | 1009 | 1067 | 1927 | 1985 | 3.19e-11 | 68.6 |
| MS.gene070339.t1 | AT1G22060 | 25.052 | 966 | 529 | 33 | 1 | 893 | 27 | 870 | 6.25e-33 | 139 |
| MS.gene070339.t1 | AT1G22060 | 52.542 | 59 | 28 | 0 | 1009 | 1067 | 1927 | 1985 | 3.19e-11 | 68.6 |
Find 178 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTCCAGTTCCTCAATTT+TGG | 0.100815 | 4.1:-5886498 | None:intergenic |
| TTTAGTCTGTTTGTAATTAT+TGG | 0.149429 | 4.1:-5884782 | None:intergenic |
| AGCATCGGCTTCTTCATATT+TGG | 0.200944 | 4.1:+5886454 | MS.gene070339:CDS |
| TCTCAGATCTGTCATTTCTT+TGG | 0.222739 | 4.1:-5886174 | None:intergenic |
| CATCAATAAGAGAATGTTTC+AGG | 0.227998 | 4.1:-5886013 | None:intergenic |
| TCATGTATATCGGAAGAAAA+TGG | 0.240483 | 4.1:+5887033 | MS.gene070339:CDS |
| TCACTAAATTTCCCATTCTT+AGG | 0.251223 | 4.1:-5883097 | None:intergenic |
| TTCATGATGGAAATTGTAAA+TGG | 0.253945 | 4.1:+5883036 | MS.gene070339:CDS |
| GCAATCTGGTGTGGATTCTT+TGG | 0.281309 | 4.1:+5882953 | MS.gene070339:CDS |
| TTGGTACTCTCTATAGTTCC+TGG | 0.288824 | 4.1:+5882972 | MS.gene070339:CDS |
| TTATCAAAAGCTAGTATCTT+TGG | 0.299529 | 4.1:+5883250 | MS.gene070339:CDS |
| ATGAAGCTGTTAAGTTAATC+AGG | 0.307694 | 4.1:+5883072 | MS.gene070339:CDS |
| GGTATTTCTGCTTCTTTCTC+TGG | 0.307986 | 4.1:-5887248 | None:intergenic |
| TGAACTAGTTCTTGCTGTTC+AGG | 0.309083 | 4.1:+5884711 | MS.gene070339:CDS |
| CCATCTTATATGCAAATTCA+TGG | 0.311512 | 4.1:-5885032 | None:intergenic |
| TACAAGAAAATAGTGATAAA+AGG | 0.318196 | 4.1:+5883537 | MS.gene070339:CDS |
| GGTCACTTGATGAGCTAAAT+AGG | 0.319780 | 4.1:+5885907 | MS.gene070339:CDS |
| TCTATAGTTCCTGGAGATAA+TGG | 0.322135 | 4.1:+5882981 | MS.gene070339:CDS |
| CAAGGCTGAAGTTGCTGCTT+TGG | 0.329744 | 4.1:+5884375 | MS.gene070339:CDS |
| CCTCCTCTAACTTGCGGATC+TGG | 0.350616 | 4.1:-5885218 | None:intergenic |
| TTGCCATTACTATCCATTAC+TGG | 0.360182 | 4.1:-5887269 | None:intergenic |
| ATCAGAGATCATCACATTTC+CGG | 0.360321 | 4.1:+5884236 | MS.gene070339:CDS |
| TGCTCAGCTGGTTCAGAACT+TGG | 0.368716 | 4.1:+5884262 | MS.gene070339:CDS |
| CTTGATACTCCCCGAGAACT+TGG | 0.369394 | 4.1:+5884100 | MS.gene070339:CDS |
| TCAGAGATCATCACATTTCC+GGG | 0.373245 | 4.1:+5884237 | MS.gene070339:CDS |
| CCGCAAGTTAGAGGAGGAAC+TGG | 0.375739 | 4.1:+5885224 | MS.gene070339:CDS |
| CAATGATACTTCATGTATAT+CGG | 0.381401 | 4.1:+5887023 | MS.gene070339:CDS |
| TTCAGAACTTGGTCTGAGTA+TGG | 0.384315 | 4.1:+5884273 | MS.gene070339:CDS |
| CATGTATATCGGAAGAAAAT+GGG | 0.384436 | 4.1:+5887034 | MS.gene070339:CDS |
| AACTTAACAGCTTCATAAAC+AGG | 0.386417 | 4.1:-5883065 | None:intergenic |
| TCAATCCAAAATTGAGGAAC+TGG | 0.391550 | 4.1:+5886493 | MS.gene070339:CDS |
| TATATCTCCAGTGCTTAAAT+AGG | 0.392273 | 4.1:-5883731 | None:intergenic |
| AACTCAATGATAGGAGCTTA+AGG | 0.401210 | 4.1:+5883707 | MS.gene070339:CDS |
| AGACGATGAACAGAAAGAAT+TGG | 0.403642 | 4.1:+5884846 | MS.gene070339:CDS |
| GCTTTCTCTAATCTTGTAGT+TGG | 0.404902 | 4.1:-5883008 | None:intergenic |
| CTAAGTCAGCTTCAAATCCT+TGG | 0.409289 | 4.1:-5885257 | None:intergenic |
| GAACCAGATCCGCAAGTTAG+AGG | 0.409504 | 4.1:+5885215 | MS.gene070339:CDS |
| CTCTACATCCGCTGCCTGAT+GGG | 0.410650 | 4.1:-5884341 | None:intergenic |
| CTCAAGTAAGTGTGTCTCCT+TGG | 0.410803 | 4.1:-5884896 | None:intergenic |
| TATTTCTTAGTCCAAGTTCT+CGG | 0.414133 | 4.1:-5884111 | None:intergenic |
| CTCAAATTTGCAGAGGTAGA+AGG | 0.414746 | 4.1:+5887398 | MS.gene070339:CDS |
| ATTTCTTAGTCCAAGTTCTC+GGG | 0.415269 | 4.1:-5884110 | None:intergenic |
| TCTTCAGTTCATCGTTAAGA+TGG | 0.416884 | 4.1:-5886073 | None:intergenic |
| TCAGATGCAACAGATGTTGT+TGG | 0.420026 | 4.1:+5885602 | MS.gene070339:CDS |
| CTGAAGTTGCTGCTTTGGCC+AGG | 0.421147 | 4.1:+5884380 | MS.gene070339:CDS |
| TGAAACACATATCCAGAATC+TGG | 0.422058 | 4.1:+5885128 | MS.gene070339:CDS |
| TACAATTGCTTTGTTGAAGA+AGG | 0.422105 | 4.1:+5885875 | MS.gene070339:CDS |
| CATTTCCGGGACTGCTCAGC+TGG | 0.426590 | 4.1:+5884250 | MS.gene070339:CDS |
| AGTGAGTAGCAGATCACAAT+TGG | 0.427743 | 4.1:+5884576 | MS.gene070339:CDS |
| TGCTTCTGTCAGCGCTCTCC+TGG | 0.429455 | 4.1:-5885448 | None:intergenic |
| GTTAATCAGGATCCTAAGAA+TGG | 0.430226 | 4.1:+5883085 | MS.gene070339:CDS |
| TCCCATCAAGAATTCTCATT+CGG | 0.430666 | 4.1:+5883333 | MS.gene070339:CDS |
| AGACATTTCTCCCTAAATCA+TGG | 0.435733 | 4.1:-5884810 | None:intergenic |
| AAAATCAAAGGAGACTGCTT+TGG | 0.436264 | 4.1:+5886430 | MS.gene070339:CDS |
| TTAAGCACTGGAGATATAGA+TGG | 0.437350 | 4.1:+5883736 | MS.gene070339:CDS |
| AGAATTGGATGAGCTTGTTA+AGG | 0.441376 | 4.1:+5884861 | MS.gene070339:CDS |
| TAAGTCAGCTTCAAATCCTT+GGG | 0.449405 | 4.1:-5885256 | None:intergenic |
| GAAGGAGCACCATTTGTTGT+AGG | 0.449517 | 4.1:-5884145 | None:intergenic |
| TCAAGTTCCGATGGAAGCTC+TGG | 0.453777 | 4.1:+5884076 | MS.gene070339:CDS |
| TCCAGCTCTTGTGTTTGCAT+TGG | 0.461122 | 4.1:-5884008 | None:intergenic |
| ACATGGAACTTCAAACTCTT+CGG | 0.462481 | 4.1:+5884419 | MS.gene070339:CDS |
| CTGAACCAGCTGAGCAGTCC+CGG | 0.463105 | 4.1:-5884255 | None:intergenic |
| AGTTGCTGCTTTGGCCAGGC+AGG | 0.463456 | 4.1:+5884384 | MS.gene070339:CDS |
| CTCTCAAGATGCCCTTCCTC+GGG | 0.464252 | 4.1:+5884312 | MS.gene070339:CDS |
| GGATGAATTCTCAAATTCTC+TGG | 0.465792 | 4.1:+5885173 | MS.gene070339:CDS |
| GTCTGACACATCCACCTGCC+TGG | 0.469758 | 4.1:-5884398 | None:intergenic |
| CCATGAATTTGCATATAAGA+TGG | 0.474720 | 4.1:+5885032 | MS.gene070339:CDS |
| GCCAATGCAAACACAAGAGC+TGG | 0.476631 | 4.1:+5884007 | MS.gene070339:CDS |
| CACATCTCTTGTGTTTGCAT+TGG | 0.480579 | 4.1:-5883981 | None:intergenic |
| TAATTTCAGGTGCTGCAATC+TGG | 0.483291 | 4.1:+5882939 | None:intergenic |
| TCATGATGGAAATTGTAAAT+GGG | 0.485115 | 4.1:+5883037 | MS.gene070339:CDS |
| AGCATCCACCCTACAACAAA+TGG | 0.485951 | 4.1:+5884136 | MS.gene070339:CDS |
| GCAGATGGAGCAGCTTGCAC+TGG | 0.486211 | 4.1:+5884984 | MS.gene070339:CDS |
| CTGGATTGAGTGCTGATTGT+AGG | 0.487970 | 4.1:+5884026 | MS.gene070339:CDS |
| AGAAGCAGAAATACCAGTAA+TGG | 0.488162 | 4.1:+5887256 | MS.gene070339:CDS |
| TCTCTACATCCGCTGCCTGA+TGG | 0.489393 | 4.1:-5884342 | None:intergenic |
| TCCTCGGGAAAGTTCCCATC+AGG | 0.490245 | 4.1:+5884327 | MS.gene070339:CDS |
| CTTCAAAATCTTGCTGTGGA+TGG | 0.491798 | 4.1:+5884190 | MS.gene070339:CDS |
| AGCACGAGGAACAAGTTGGC+AGG | 0.494013 | 4.1:+5885664 | MS.gene070339:CDS |
| GCTCTCAAGATGCCCTTCCT+CGG | 0.494210 | 4.1:+5884311 | MS.gene070339:CDS |
| TTGAAGCTCTGAAGAGTGGC+TGG | 0.496987 | 4.1:-5884173 | None:intergenic |
| TGCTGCTTTGGCCAGGCAGG+TGG | 0.498919 | 4.1:+5884387 | MS.gene070339:CDS |
| GAATGCTCTTCTCCTCCTCC+TGG | 0.498944 | 4.1:+5885093 | MS.gene070339:CDS |
| TTCGTTTGCGAAAAGATTTG+AGG | 0.499440 | 4.1:-5884540 | None:intergenic |
| AGAAATCTTAAGTTCTGACT+TGG | 0.501338 | 4.1:+5885776 | MS.gene070339:CDS |
| GGAGACTGCTTTGGAAGCAT+CGG | 0.501587 | 4.1:+5886439 | MS.gene070339:CDS |
| ATCGGAAGAAAATGGGGTTG+TGG | 0.503083 | 4.1:+5887041 | MS.gene070339:CDS |
| CAAAGCTTCCTCAGCTCGAA+TGG | 0.504131 | 4.1:-5885319 | None:intergenic |
| ATCAGTCAAAGCCGATTATG+AGG | 0.504634 | 4.1:+5885536 | MS.gene070339:CDS |
| ATCCGAATGAGAATTCTTGA+TGG | 0.505562 | 4.1:-5883335 | None:intergenic |
| TAACATTTGCAGAGAGGAGG+AGG | 0.507929 | 4.1:+5883663 | MS.gene070339:intron |
| TAAGAAGCCTCAAGAATGCT+AGG | 0.509109 | 4.1:+5887447 | MS.gene070339:CDS |
| AAATCAACTCAAGAAACAAT+CGG | 0.509218 | 4.1:+5885152 | MS.gene070339:CDS |
| ATGGTGAGATAGAGATGTAT+AGG | 0.523635 | 4.1:+5884938 | MS.gene070339:CDS |
| AGCCCTTCCTAGCATTCTTG+AGG | 0.524438 | 4.1:-5887454 | None:intergenic |
| ATCGTAAAGGAAAGCAAAAG+AGG | 0.525734 | 4.1:+5884448 | MS.gene070339:CDS |
| GGCTTCTTCATATTTGGAGA+AGG | 0.526343 | 4.1:+5886460 | MS.gene070339:CDS |
| AAGCCTCAAGAATGCTAGGA+AGG | 0.527879 | 4.1:+5887451 | MS.gene070339:CDS |
| AGTATGGACGGTTCAATACA+TGG | 0.528292 | 4.1:+5884289 | MS.gene070339:CDS |
| GGCTTCAAGAAGAATTCAAA+AGG | 0.530246 | 4.1:+5885379 | MS.gene070339:CDS |
| TTAATCAGGATCCTAAGAAT+GGG | 0.531828 | 4.1:+5883086 | MS.gene070339:CDS |
| AAGGAGCACCATTTGTTGTA+GGG | 0.532047 | 4.1:-5884144 | None:intergenic |
| TCGTGTGCAGAAGAGACTAC+TGG | 0.533605 | 4.1:+5885479 | MS.gene070339:CDS |
| ATGCAAATGAGACGGCTACC+AGG | 0.533949 | 4.1:+5885430 | MS.gene070339:CDS |
| TTAAGGACCTATTTAAGCAC+TGG | 0.534125 | 4.1:+5883724 | MS.gene070339:CDS |
| GACACATGACAAAGTTAAGC+AGG | 0.540859 | 4.1:+5885287 | MS.gene070339:CDS |
| GCAGATCACAATTGGAAGGT+GGG | 0.541610 | 4.1:+5884584 | MS.gene070339:CDS |
| GAAAGAAAGAGACAAATCAA+TGG | 0.549242 | 4.1:+5887331 | MS.gene070339:CDS |
| CAAGGATGAAGAGGAGAAAG+TGG | 0.551905 | 4.1:+5885941 | MS.gene070339:CDS |
| GATGGGAACTTTCCCGAGGA+AGG | 0.551943 | 4.1:-5884324 | None:intergenic |
| AAAGGAAAGCAAAAGAGGGC+AGG | 0.553150 | 4.1:+5884453 | MS.gene070339:CDS |
| GAGAAAGCTATAGTTCATGA+TGG | 0.553319 | 4.1:+5883023 | MS.gene070339:CDS |
| GGAAGTTATCAGCTTGAAAG+AGG | 0.554330 | 4.1:+5884486 | MS.gene070339:CDS |
| AGAACTTCAATCCAAAATTG+AGG | 0.555244 | 4.1:+5886487 | MS.gene070339:CDS |
| GACATTTCTCCCTAAATCAT+GGG | 0.557392 | 4.1:-5884809 | None:intergenic |
| TAACGATGAACTGAAGAAGA+AGG | 0.562401 | 4.1:+5886079 | MS.gene070339:CDS |
| GTGCTTCAAACAGGTTGTTG+CGG | 0.562680 | 4.1:+5886939 | MS.gene070339:intron |
| TCTTCGGAAACAAATCGTAA+AGG | 0.563402 | 4.1:+5884435 | MS.gene070339:CDS |
| AAGTCATTTATACCAGGAGG+AGG | 0.563516 | 4.1:-5885105 | None:intergenic |
| TTGTGGTGTCATCAGTCAAG+AGG | 0.564972 | 4.1:+5887058 | MS.gene070339:CDS |
| AATTAACATTTGCAGAGAGG+AGG | 0.568188 | 4.1:+5883660 | MS.gene070339:intron |
| AGATGAGTTAGAGATGCAGA+TGG | 0.572394 | 4.1:+5884969 | MS.gene070339:CDS |
| GCTGATTGTAGGACATCTAG+TGG | 0.573852 | 4.1:+5884037 | MS.gene070339:CDS |
| AGCCTCAAGAATGCTAGGAA+GGG | 0.578599 | 4.1:+5887452 | MS.gene070339:CDS |
| CTCATTTGCATCAAATGTAG+TGG | 0.579737 | 4.1:-5885418 | None:intergenic |
| GGAAAGTTCCCATCAGGCAG+CGG | 0.580002 | 4.1:+5884333 | MS.gene070339:CDS |
| GTTTCAAAGTCATTTATACC+AGG | 0.583051 | 4.1:-5885111 | None:intergenic |
| ATGGGAACTTTCCCGAGGAA+GGG | 0.586539 | 4.1:-5884323 | None:intergenic |
| CAAAAGGCTATCAATGCAGA+TGG | 0.586827 | 4.1:+5885395 | MS.gene070339:CDS |
| GATGCATCTCAAGGATGAAG+AGG | 0.587248 | 4.1:+5885932 | MS.gene070339:CDS |
| GAGCACCATTTGTTGTAGGG+TGG | 0.591831 | 4.1:-5884141 | None:intergenic |
| ATACCAGTAATGGATAGTAA+TGG | 0.592797 | 4.1:+5887266 | MS.gene070339:CDS |
| TGAGGAACTGGAGGACAAAG+TGG | 0.595036 | 4.1:+5886505 | MS.gene070339:CDS |
| CTGGTTCTCAAGAGACTCGA+TGG | 0.595679 | 4.1:-5885199 | None:intergenic |
| CCAGTTCCTCCTCTAACTTG+CGG | 0.595754 | 4.1:-5885224 | None:intergenic |
| GCAAAGAGCCATTCGAGCTG+AGG | 0.597598 | 4.1:+5885311 | MS.gene070339:CDS |
| AGCAGATCACAATTGGAAGG+TGG | 0.598653 | 4.1:+5884583 | MS.gene070339:CDS |
| TCCGAATGAGAATTCTTGAT+GGG | 0.599669 | 4.1:-5883334 | None:intergenic |
| GAAGAGTGGCTGGTGACTGA+AGG | 0.602498 | 4.1:-5884163 | None:intergenic |
| AGAGCTTCAAAATCTTGCTG+TGG | 0.602851 | 4.1:+5884186 | MS.gene070339:CDS |
| ATCCAAAATTGAGGAACTGG+AGG | 0.603562 | 4.1:+5886496 | MS.gene070339:CDS |
| ATTACAATGTCAAGTTCCGA+TGG | 0.606268 | 4.1:+5884067 | MS.gene070339:CDS |
| AAATAGGATGATGCATCTCA+AGG | 0.610535 | 4.1:+5885923 | MS.gene070339:CDS |
| ACAGGACCTGATAAAATCAA+AGG | 0.611635 | 4.1:+5886418 | MS.gene070339:intron |
| CTGTTGCATCTGAACTGTCA+TGG | 0.612030 | 4.1:-5885592 | None:intergenic |
| TACATTTGATGCAAATGAGA+CGG | 0.612659 | 4.1:+5885422 | MS.gene070339:CDS |
| GCACGAGGAACAAGTTGGCA+GGG | 0.612830 | 4.1:+5885665 | MS.gene070339:CDS |
| TCAGAGCATTGCTTTGCCAA+AGG | 0.613432 | 4.1:+5886538 | MS.gene070339:CDS |
| CAGATCACAATTGGAAGGTG+GGG | 0.613615 | 4.1:+5884585 | MS.gene070339:CDS |
| TCAGGTGCTGCAATCTGGTG+TGG | 0.614625 | 4.1:+5882944 | None:intergenic |
| GAACTTGGTCTGAGTATGGA+CGG | 0.616193 | 4.1:+5884277 | MS.gene070339:CDS |
| GCAGGTGGATGTGTCAGACA+TGG | 0.623993 | 4.1:+5884402 | MS.gene070339:CDS |
| ATCAAGTCCAGAGCTTCCAT+CGG | 0.625295 | 4.1:-5884083 | None:intergenic |
| ACTTATGAAGAAATCACTTG+AGG | 0.632005 | 4.1:+5885800 | MS.gene070339:CDS |
| TCAAAGTCATTTATACCAGG+AGG | 0.633961 | 4.1:-5885108 | None:intergenic |
| GTAATGGATAGTAATGGCAA+TGG | 0.635117 | 4.1:+5887272 | MS.gene070339:CDS |
| ACAAGAATTGAATCACGAGA+AGG | 0.636953 | 4.1:+5884636 | MS.gene070339:CDS |
| AGTAGCAGATCACAATTGGA+AGG | 0.637940 | 4.1:+5884580 | MS.gene070339:CDS |
| TCGTAAAGGAAAGCAAAAGA+GGG | 0.638358 | 4.1:+5884449 | MS.gene070339:CDS |
| TTTCTTAGTCCAAGTTCTCG+GGG | 0.640293 | 4.1:-5884109 | None:intergenic |
| ATGTATATCGGAAGAAAATG+GGG | 0.640455 | 4.1:+5887035 | MS.gene070339:CDS |
| AAGAGGGCAGGAGCTCGCAA+AGG | 0.640963 | 4.1:+5884465 | MS.gene070339:CDS |
| ATTCAGTTAAAACGTTGCTG+AGG | 0.645034 | 4.1:-5887298 | None:intergenic |
| TAAGGATCAAAGCAGTGCCA+AGG | 0.648474 | 4.1:+5884879 | MS.gene070339:CDS |
| CCAGATCCGCAAGTTAGAGG+AGG | 0.652701 | 4.1:+5885218 | MS.gene070339:CDS |
| ATTACAGTTAAATAAGACAC+AGG | 0.657648 | 4.1:+5884678 | MS.gene070339:CDS |
| AATGAGTCTCAAATTTGCAG+AGG | 0.664150 | 4.1:+5887391 | MS.gene070339:CDS |
| TGTTGAAGAAGGAAGCAGAA+CGG | 0.665549 | 4.1:+5885886 | MS.gene070339:CDS |
| GCCTGATGGGAACTTTCCCG+AGG | 0.673014 | 4.1:-5884328 | None:intergenic |
| AAGGATGAAGAGGAGAAAGT+GGG | 0.675953 | 4.1:+5885942 | MS.gene070339:CDS |
| GAACTGGAGAAACAAGCCCA+AGG | 0.679568 | 4.1:+5885240 | MS.gene070339:CDS |
| TCAAACACTAACATGCAAGA+CGG | 0.686206 | 4.1:-5883359 | None:intergenic |
| GGAACTGGAGGACAAAGTGG+AGG | 0.698428 | 4.1:+5886508 | MS.gene070339:CDS |
| TGAGAATGAAAAGCTTACAG+TGG | 0.700759 | 4.1:+5885719 | MS.gene070339:CDS |
| AGTTGGCAGGGATTTCTCTG+AGG | 0.701615 | 4.1:+5885677 | MS.gene070339:CDS |
| TCTGCTCTAACATTGCATCG+AGG | 0.707967 | 4.1:-5884735 | None:intergenic |
| TGTGCAGAAGAGACTACTGG+AGG | 0.721029 | 4.1:+5885482 | MS.gene070339:CDS |
| AAAATGCTAATACTGCAGAG+AGG | 0.734559 | 4.1:+5885358 | MS.gene070339:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAACATAATTTTAACAAT+GGG | - | chr4.1:5883914-5883933 | None:intergenic | 15.0% |
| !!! | TTATTATTTTGTGATTTCAA+CGG | + | chr4.1:5883126-5883145 | MS.gene070339:intron | 15.0% |
| !!! | TTCAAACATAATTTTAACAA+TGG | - | chr4.1:5883915-5883934 | None:intergenic | 15.0% |
| !! | AAATTTATTAGTGTCACAAT+TGG | - | chr4.1:5887161-5887180 | None:intergenic | 20.0% |
| !! | ATATATATATATGTCTTGCT+TGG | + | chr4.1:5886828-5886847 | MS.gene070339:intron | 20.0% |
| !! | GTTATTGAATGGTTTATTTA+TGG | + | chr4.1:5887191-5887210 | MS.gene070339:intron | 20.0% |
| !! | TAAGACAAATTATAAATGAC+AGG | - | chr4.1:5886693-5886712 | None:intergenic | 20.0% |
| !! | TACAAGAAAATAGTGATAAA+AGG | + | chr4.1:5883537-5883556 | MS.gene070339:CDS | 20.0% |
| !! | TACAATAATGAATAATTCCT+TGG | - | chr4.1:5883807-5883826 | None:intergenic | 20.0% |
| !! | TTTAGTCTGTTTGTAATTAT+TGG | - | chr4.1:5884785-5884804 | None:intergenic | 20.0% |
| !!! | TGTCATTTATAATTTGTCTT+AGG | + | chr4.1:5886692-5886711 | MS.gene070339:intron | 20.0% |
| ! | AAATCAACTCAAGAAACAAT+CGG | + | chr4.1:5885152-5885171 | MS.gene070339:CDS | 25.0% |
| ! | AATGTTAGAGCAGAAAAATA+AGG | + | chr4.1:5884744-5884763 | MS.gene070339:CDS | 25.0% |
| ! | AGAGAAAATAAAAATGCTTG+AGG | + | chr4.1:5886196-5886215 | MS.gene070339:CDS | 25.0% |
| ! | ATTACAGTTAAATAAGACAC+AGG | + | chr4.1:5884678-5884697 | MS.gene070339:CDS | 25.0% |
| ! | CAAAATCTATATCCAGAAAA+GGG | - | chr4.1:5883593-5883612 | None:intergenic | 25.0% |
| ! | CAATGATACTTCATGTATAT+CGG | + | chr4.1:5887023-5887042 | MS.gene070339:CDS | 25.0% |
| ! | CCAAAATTTCAACAATTTGA+AGG | - | chr4.1:5883411-5883430 | None:intergenic | 25.0% |
| ! | CTAGATGAAAATATCTATAG+AGG | - | chr4.1:5886294-5886313 | None:intergenic | 25.0% |
| ! | GCATATTTATTGCAGATATA+TGG | - | chr4.1:5886911-5886930 | None:intergenic | 25.0% |
| ! | TCAAAATCTATATCCAGAAA+AGG | - | chr4.1:5883594-5883613 | None:intergenic | 25.0% |
| ! | TCAATATATGTGTTGAGTAA+AGG | - | chr4.1:5883836-5883855 | None:intergenic | 25.0% |
| ! | TTATCAAAAGCTAGTATCTT+TGG | + | chr4.1:5883250-5883269 | MS.gene070339:CDS | 25.0% |
| ! | TTATCAAGCATATTTCTCAA+AGG | - | chr4.1:5886258-5886277 | None:intergenic | 25.0% |
| ! | TTGATTGTGAATTTGTGATA+TGG | + | chr4.1:5883201-5883220 | MS.gene070339:intron | 25.0% |
| !! | AAATAGTGATAAAAGGTATG+TGG | + | chr4.1:5883544-5883563 | MS.gene070339:intron | 25.0% |
| !! | AATAGTGATAAAAGGTATGT+GGG | + | chr4.1:5883545-5883564 | MS.gene070339:intron | 25.0% |
| !! | ATTCAGTTTTACCTCATAAT+CGG | - | chr4.1:5885550-5885569 | None:intergenic | 25.0% |
| !! | CCTTCAAATTGTTGAAATTT+TGG | + | chr4.1:5883408-5883427 | MS.gene070339:intron | 25.0% |
| !! | GATTCTTTTAAATACTCGAA+AGG | + | chr4.1:5885830-5885849 | MS.gene070339:CDS | 25.0% |
| !! | GGTAAATTTTCAAATCCTTT+TGG | + | chr4.1:5886217-5886236 | MS.gene070339:intron | 25.0% |
| !! | TATTTGTTCTATTTTGCCTA+GGG | + | chr4.1:5883226-5883245 | MS.gene070339:intron | 25.0% |
| !! | TCATGATGGAAATTGTAAAT+GGG | + | chr4.1:5883037-5883056 | MS.gene070339:CDS | 25.0% |
| !! | TTATTTGTTCTATTTTGCCT+AGG | + | chr4.1:5883225-5883244 | MS.gene070339:intron | 25.0% |
| !! | TTCATGATGGAAATTGTAAA+TGG | + | chr4.1:5883036-5883055 | MS.gene070339:CDS | 25.0% |
| !! | TTTTTCTTTCTAGATTTCAC+AGG | + | chr4.1:5883949-5883968 | MS.gene070339:intron | 25.0% |
| !!! | AAGGTTTTATCATGAATTGT+TGG | + | chr4.1:5886861-5886880 | MS.gene070339:intron | 25.0% |
| !!! | ACTTAAGTTAGTTCTATCAA+AGG | - | chr4.1:5886347-5886366 | None:intergenic | 25.0% |
| !!! | AGTATTAGCATTTTTAAGTC+TGG | - | chr4.1:5885352-5885371 | None:intergenic | 25.0% |
| !!! | AGTTCTGATTTTTTGCTAAA+TGG | + | chr4.1:5883494-5883513 | MS.gene070339:intron | 25.0% |
| !!! | CTTAAGTTAGTTCTATCAAA+GGG | - | chr4.1:5886346-5886365 | None:intergenic | 25.0% |
| !!! | GCAACGATTGATAATATTTT+TGG | + | chr4.1:5886714-5886733 | MS.gene070339:intron | 25.0% |
| !!! | TCTTTTTGTTGTTGACTTTT+TGG | + | chr4.1:5883156-5883175 | MS.gene070339:intron | 25.0% |
| !!! | TTTCTTATTTTCAAGTTGCA+TGG | - | chr4.1:5885643-5885662 | None:intergenic | 25.0% |
| AACTTAACAGCTTCATAAAC+AGG | - | chr4.1:5883068-5883087 | None:intergenic | 30.0% | |
| ACTAAAAACTCCCATGATTT+AGG | + | chr4.1:5884799-5884818 | MS.gene070339:CDS | 30.0% | |
| ACTTATGAAGAAATCACTTG+AGG | + | chr4.1:5885800-5885819 | MS.gene070339:CDS | 30.0% | |
| AGAACTTCAATCCAAAATTG+AGG | + | chr4.1:5886487-5886506 | MS.gene070339:CDS | 30.0% | |
| ATATGTGTTCTTAATGCCAT+AGG | - | chr4.1:5887125-5887144 | None:intergenic | 30.0% | |
| ATGAAGCTGTTAAGTTAATC+AGG | + | chr4.1:5883072-5883091 | MS.gene070339:CDS | 30.0% | |
| ATGTATATCGGAAGAAAATG+GGG | + | chr4.1:5887035-5887054 | MS.gene070339:CDS | 30.0% | |
| CATAAAAACAGTTGAGTATG+AGG | - | chr4.1:5883622-5883641 | None:intergenic | 30.0% | |
| CATCAATAAGAGAATGTTTC+AGG | - | chr4.1:5886016-5886035 | None:intergenic | 30.0% | |
| CATGTATATCGGAAGAAAAT+GGG | + | chr4.1:5887034-5887053 | MS.gene070339:CDS | 30.0% | |
| CCAAACAAAAACTCAATGAT+AGG | + | chr4.1:5883698-5883717 | MS.gene070339:CDS | 30.0% | |
| CCATCTTATATGCAAATTCA+TGG | - | chr4.1:5885035-5885054 | None:intergenic | 30.0% | |
| CCATGAATTTGCATATAAGA+TGG | + | chr4.1:5885032-5885051 | MS.gene070339:CDS | 30.0% | |
| CTAAAAACTCCCATGATTTA+GGG | + | chr4.1:5884800-5884819 | MS.gene070339:CDS | 30.0% | |
| CTTACTTGAGCAAAAAATCA+CGG | + | chr4.1:5884909-5884928 | MS.gene070339:CDS | 30.0% | |
| GAAAGAAAGAGACAAATCAA+TGG | + | chr4.1:5887331-5887350 | MS.gene070339:CDS | 30.0% | |
| GGGATGATTATCTTGATTAT+TGG | + | chr4.1:5883566-5883585 | MS.gene070339:intron | 30.0% | |
| GTTAATTAACATTTGCAGAG+AGG | + | chr4.1:5883657-5883676 | MS.gene070339:intron | 30.0% | |
| GTTTCAAAGTCATTTATACC+AGG | - | chr4.1:5885114-5885133 | None:intergenic | 30.0% | |
| TACATTTGATGCAAATGAGA+CGG | + | chr4.1:5885422-5885441 | MS.gene070339:CDS | 30.0% | |
| TATATCTCCAGTGCTTAAAT+AGG | - | chr4.1:5883734-5883753 | None:intergenic | 30.0% | |
| TATGTGTTCTTAATGCCATA+GGG | - | chr4.1:5887124-5887143 | None:intergenic | 30.0% | |
| TATTTCTTAGTCCAAGTTCT+CGG | - | chr4.1:5884114-5884133 | None:intergenic | 30.0% | |
| TCACTAAATTTCCCATTCTT+AGG | - | chr4.1:5883100-5883119 | None:intergenic | 30.0% | |
| TCATGTATATCGGAAGAAAA+TGG | + | chr4.1:5887033-5887052 | MS.gene070339:CDS | 30.0% | |
| TGTACAAATTGGTATACCTT+TGG | - | chr4.1:5886557-5886576 | None:intergenic | 30.0% | |
| TGTAGAGAATGAAAAACTCA+AGG | + | chr4.1:5884357-5884376 | MS.gene070339:CDS | 30.0% | |
| TGTGAACTGAAGTTATTGAA+TGG | + | chr4.1:5887180-5887199 | MS.gene070339:intron | 30.0% | |
| TTAACAATGGGAATAGAAGA+AGG | - | chr4.1:5883902-5883921 | None:intergenic | 30.0% | |
| TTAATCAGGATCCTAAGAAT+GGG | + | chr4.1:5883086-5883105 | MS.gene070339:CDS | 30.0% | |
| ! | AGAAATCTTAAGTTCTGACT+TGG | + | chr4.1:5885776-5885795 | MS.gene070339:CDS | 30.0% |
| ! | AGTTTTACTACTACAAGTGA+CGG | + | chr4.1:5886967-5886986 | MS.gene070339:CDS | 30.0% |
| ! | ATAGTGATAAAAGGTATGTG+GGG | + | chr4.1:5883546-5883565 | MS.gene070339:intron | 30.0% |
| ! | CCTATCATTGAGTTTTTGTT+TGG | - | chr4.1:5883701-5883720 | None:intergenic | 30.0% |
| ! | TACAATTGCTTTGTTGAAGA+AGG | + | chr4.1:5885875-5885894 | MS.gene070339:CDS | 30.0% |
| ! | TGAAAATAAGAAAAAGCACG+AGG | + | chr4.1:5885650-5885669 | MS.gene070339:CDS | 30.0% |
| !! | AAAGTGATTCTTCTGAAGTA+AGG | + | chr4.1:5883767-5883786 | MS.gene070339:intron | 30.0% |
| !! | ATACCAGTAATGGATAGTAA+TGG | + | chr4.1:5887266-5887285 | MS.gene070339:CDS | 30.0% |
| !! | CAAAATGATTTGCTTATGAC+AGG | + | chr4.1:5886400-5886419 | MS.gene070339:intron | 30.0% |
| !!! | AATGGTTTTAGTCTCAATGT+AGG | - | chr4.1:5886117-5886136 | None:intergenic | 30.0% |
| !!! | ACTTTTTTGGTTAGTTGGAA+TGG | - | chr4.1:5886135-5886154 | None:intergenic | 30.0% |
| !!! | GAAGAATTGAAGCACTTTTT+TGG | - | chr4.1:5886148-5886167 | None:intergenic | 30.0% |
| !!! | GGACTATGAAATTTTGAAAC+AGG | + | chr4.1:5885005-5885024 | MS.gene070339:CDS | 30.0% |
| !!! | TGATTTTTTGCTAAATGGAC+AGG | + | chr4.1:5883499-5883518 | MS.gene070339:intron | 30.0% |
| AAAATCAAAGGAGACTGCTT+TGG | + | chr4.1:5886430-5886449 | MS.gene070339:CDS | 35.0% | |
| AAAATGCTAATACTGCAGAG+AGG | + | chr4.1:5885358-5885377 | MS.gene070339:CDS | 35.0% | |
| AAATAGGATGATGCATCTCA+AGG | + | chr4.1:5885923-5885942 | MS.gene070339:CDS | 35.0% | |
| AACTCAATGATAGGAGCTTA+AGG | + | chr4.1:5883707-5883726 | MS.gene070339:CDS | 35.0% | |
| AATGAGTCTCAAATTTGCAG+AGG | + | chr4.1:5887391-5887410 | MS.gene070339:CDS | 35.0% | |
| AATGCCATAGGGAAGAAAAA+AGG | - | chr4.1:5887113-5887132 | None:intergenic | 35.0% | |
| AATTAACATTTGCAGAGAGG+AGG | + | chr4.1:5883660-5883679 | MS.gene070339:intron | 35.0% | |
| ACAAGAATTGAATCACGAGA+AGG | + | chr4.1:5884636-5884655 | MS.gene070339:CDS | 35.0% | |
| ACAGGACCTGATAAAATCAA+AGG | + | chr4.1:5886418-5886437 | MS.gene070339:intron | 35.0% | |
| ACATGGAACTTCAAACTCTT+CGG | + | chr4.1:5884419-5884438 | MS.gene070339:CDS | 35.0% | |
| AGAAGCAGAAATACCAGTAA+TGG | + | chr4.1:5887256-5887275 | MS.gene070339:CDS | 35.0% | |
| AGACATTTCTCCCTAAATCA+TGG | - | chr4.1:5884813-5884832 | None:intergenic | 35.0% | |
| AGACGATGAACAGAAAGAAT+TGG | + | chr4.1:5884846-5884865 | MS.gene070339:CDS | 35.0% | |
| ATCAGAGATCATCACATTTC+CGG | + | chr4.1:5884236-5884255 | MS.gene070339:CDS | 35.0% | |
| ATCCGAATGAGAATTCTTGA+TGG | - | chr4.1:5883338-5883357 | None:intergenic | 35.0% | |
| ATCGTAAAGGAAAGCAAAAG+AGG | + | chr4.1:5884448-5884467 | MS.gene070339:CDS | 35.0% | |
| ATGCCATAGGGAAGAAAAAA+GGG | - | chr4.1:5887112-5887131 | None:intergenic | 35.0% | |
| ATGGTGAGATAGAGATGTAT+AGG | + | chr4.1:5884938-5884957 | MS.gene070339:CDS | 35.0% | |
| ATTACAATGTCAAGTTCCGA+TGG | + | chr4.1:5884067-5884086 | MS.gene070339:CDS | 35.0% | |
| ATTCAGTTAAAACGTTGCTG+AGG | - | chr4.1:5887301-5887320 | None:intergenic | 35.0% | |
| ATTTCTTAGTCCAAGTTCTC+GGG | - | chr4.1:5884113-5884132 | None:intergenic | 35.0% | |
| CAAAAAATCACGGATCTCTA+TGG | + | chr4.1:5884919-5884938 | MS.gene070339:CDS | 35.0% | |
| CTCATTTGCATCAAATGTAG+TGG | - | chr4.1:5885421-5885440 | None:intergenic | 35.0% | |
| CTTGCTTGGTATCTTGATTA+AGG | + | chr4.1:5886842-5886861 | MS.gene070339:intron | 35.0% | |
| GAAGTAAGGTTTCACTCATT+GGG | + | chr4.1:5883781-5883800 | MS.gene070339:intron | 35.0% | |
| GACATTTCTCCCTAAATCAT+GGG | - | chr4.1:5884812-5884831 | None:intergenic | 35.0% | |
| GAGAAAGCTATAGTTCATGA+TGG | + | chr4.1:5883023-5883042 | MS.gene070339:CDS | 35.0% | |
| GCTTTCTCTAATCTTGTAGT+TGG | - | chr4.1:5883011-5883030 | None:intergenic | 35.0% | |
| GGATGAATTCTCAAATTCTC+TGG | + | chr4.1:5885173-5885192 | MS.gene070339:CDS | 35.0% | |
| GGCTTCAAGAAGAATTCAAA+AGG | + | chr4.1:5885379-5885398 | MS.gene070339:CDS | 35.0% | |
| GTTAATCAGGATCCTAAGAA+TGG | + | chr4.1:5883085-5883104 | MS.gene070339:CDS | 35.0% | |
| TAACGATGAACTGAAGAAGA+AGG | + | chr4.1:5886079-5886098 | MS.gene070339:CDS | 35.0% | |
| TAAGTCAGCTTCAAATCCTT+GGG | - | chr4.1:5885259-5885278 | None:intergenic | 35.0% | |
| TATCAGTCATCAATGCACTT+TGG | - | chr4.1:5886643-5886662 | None:intergenic | 35.0% | |
| TCAAACACTAACATGCAAGA+CGG | - | chr4.1:5883362-5883381 | None:intergenic | 35.0% | |
| TCAAAGTCATTTATACCAGG+AGG | - | chr4.1:5885111-5885130 | None:intergenic | 35.0% | |
| TCAATCCAAAATTGAGGAAC+TGG | + | chr4.1:5886493-5886512 | MS.gene070339:CDS | 35.0% | |
| TCCCATCAAGAATTCTCATT+CGG | + | chr4.1:5883333-5883352 | MS.gene070339:CDS | 35.0% | |
| TCCGAATGAGAATTCTTGAT+GGG | - | chr4.1:5883337-5883356 | None:intergenic | 35.0% | |
| TCGTAAAGGAAAGCAAAAGA+GGG | + | chr4.1:5884449-5884468 | MS.gene070339:CDS | 35.0% | |
| TCTATAGTTCCTGGAGATAA+TGG | + | chr4.1:5882981-5883000 | MS.gene070339:CDS | 35.0% | |
| TCTTCAGTTCATCGTTAAGA+TGG | - | chr4.1:5886076-5886095 | None:intergenic | 35.0% | |
| TCTTCGGAAACAAATCGTAA+AGG | + | chr4.1:5884435-5884454 | MS.gene070339:CDS | 35.0% | |
| TGAAACACATATCCAGAATC+TGG | + | chr4.1:5885128-5885147 | MS.gene070339:CDS | 35.0% | |
| TGAAGTAAGGTTTCACTCAT+TGG | + | chr4.1:5883780-5883799 | MS.gene070339:intron | 35.0% | |
| TGAGAATGAAAAGCTTACAG+TGG | + | chr4.1:5885719-5885738 | MS.gene070339:CDS | 35.0% | |
| TTAAGGACCTATTTAAGCAC+TGG | + | chr4.1:5883724-5883743 | MS.gene070339:CDS | 35.0% | |
| TTCGTTTGCGAAAAGATTTG+AGG | - | chr4.1:5884543-5884562 | None:intergenic | 35.0% | |
| TTGCCATTACTATCCATTAC+TGG | - | chr4.1:5887272-5887291 | None:intergenic | 35.0% | |
| ! | AAGTGTTGCGATGTACAAAT+TGG | - | chr4.1:5886568-5886587 | None:intergenic | 35.0% |
| ! | CAAATCTTTTCGCAAACGAA+GGG | + | chr4.1:5884543-5884562 | MS.gene070339:CDS | 35.0% |
| ! | TATGGATCATTTTCTGTCCA+TGG | + | chr4.1:5887209-5887228 | MS.gene070339:intron | 35.0% |
| ! | TCAAATCTTTTCGCAAACGA+AGG | + | chr4.1:5884542-5884561 | MS.gene070339:CDS | 35.0% |
| ! | TCTCAGATCTGTCATTTCTT+TGG | - | chr4.1:5886177-5886196 | None:intergenic | 35.0% |
| ! | TTGATTATTGGACCCTTTTC+TGG | + | chr4.1:5883578-5883597 | MS.gene070339:intron | 35.0% |
| !! | AGAATTGGATGAGCTTGTTA+AGG | + | chr4.1:5884861-5884880 | MS.gene070339:CDS | 35.0% |
| !! | CAGTCTCCTTTGATTTTATC+AGG | - | chr4.1:5886427-5886446 | None:intergenic | 35.0% |
| !! | GTAATGGATAGTAATGGCAA+TGG | + | chr4.1:5887272-5887291 | MS.gene070339:CDS | 35.0% |
| !! | TTAAGCACTGGAGATATAGA+TGG | + | chr4.1:5883736-5883755 | MS.gene070339:CDS | 35.0% |
| !!! | ACTAGCTTTTGATAATCCCT+AGG | - | chr4.1:5883245-5883264 | None:intergenic | 35.0% |
| !!! | GAAGCACTTTTTTGGTTAGT+TGG | - | chr4.1:5886140-5886159 | None:intergenic | 35.0% |
| !!! | GACAACTTTTGCTCTAAGAA+AGG | - | chr4.1:5883869-5883888 | None:intergenic | 35.0% |
| !!! | TCAAATCCTTTTGGTTTGAG+CGG | + | chr4.1:5886226-5886245 | MS.gene070339:intron | 35.0% |
| !!! | TGAGTTGATTTTCCAGATTC+TGG | - | chr4.1:5885143-5885162 | None:intergenic | 35.0% |
| !!! | TGTCATGGCATCTTTTTTGT+TGG | - | chr4.1:5885580-5885599 | None:intergenic | 35.0% |
| AAGGATGAAGAGGAGAAAGT+GGG | + | chr4.1:5885942-5885961 | MS.gene070339:CDS | 40.0% | |
| AAGTCATTTATACCAGGAGG+AGG | - | chr4.1:5885108-5885127 | None:intergenic | 40.0% | |
| AGAGCTTCAAAATCTTGCTG+TGG | + | chr4.1:5884186-5884205 | MS.gene070339:CDS | 40.0% | |
| AGATGAGTTAGAGATGCAGA+TGG | + | chr4.1:5884969-5884988 | MS.gene070339:CDS | 40.0% | |
| AGTAGCAGATCACAATTGGA+AGG | + | chr4.1:5884580-5884599 | MS.gene070339:CDS | 40.0% | |
| AGTATGGACGGTTCAATACA+TGG | + | chr4.1:5884289-5884308 | MS.gene070339:CDS | 40.0% | |
| AGTGAGTAGCAGATCACAAT+TGG | + | chr4.1:5884576-5884595 | MS.gene070339:CDS | 40.0% | |
| ATCAGTCAAAGCCGATTATG+AGG | + | chr4.1:5885536-5885555 | MS.gene070339:CDS | 40.0% | |
| ATCCAAAATTGAGGAACTGG+AGG | + | chr4.1:5886496-5886515 | MS.gene070339:CDS | 40.0% | |
| CAAAAGGCTATCAATGCAGA+TGG | + | chr4.1:5885395-5885414 | MS.gene070339:CDS | 40.0% | |
| CACATCTCTTGTGTTTGCAT+TGG | - | chr4.1:5883984-5884003 | None:intergenic | 40.0% | |
| CTAAGTCAGCTTCAAATCCT+TGG | - | chr4.1:5885260-5885279 | None:intergenic | 40.0% | |
| CTCAAATTTGCAGAGGTAGA+AGG | + | chr4.1:5887398-5887417 | MS.gene070339:CDS | 40.0% | |
| GACACATGACAAAGTTAAGC+AGG | + | chr4.1:5885287-5885306 | MS.gene070339:CDS | 40.0% | |
| GGAAGTTATCAGCTTGAAAG+AGG | + | chr4.1:5884486-5884505 | MS.gene070339:CDS | 40.0% | |
| GGCTTCTTCATATTTGGAGA+AGG | + | chr4.1:5886460-5886479 | MS.gene070339:CDS | 40.0% | |
| GGTCACTTGATGAGCTAAAT+AGG | + | chr4.1:5885907-5885926 | MS.gene070339:CDS | 40.0% | |
| TAAGAAGCCTCAAGAATGCT+AGG | + | chr4.1:5887447-5887466 | MS.gene070339:CDS | 40.0% | |
| TCAGAGATCATCACATTTCC+GGG | + | chr4.1:5884237-5884256 | MS.gene070339:CDS | 40.0% | |
| TCAGATGCAACAGATGTTGT+TGG | + | chr4.1:5885602-5885621 | MS.gene070339:CDS | 40.0% | |
| TGTTGAAGAAGGAAGCAGAA+CGG | + | chr4.1:5885886-5885905 | MS.gene070339:CDS | 40.0% | |
| TTCAGAACTTGGTCTGAGTA+TGG | + | chr4.1:5884273-5884292 | MS.gene070339:CDS | 40.0% | |
| TTGGTACTCTCTATAGTTCC+TGG | + | chr4.1:5882972-5882991 | MS.gene070339:CDS | 40.0% | |
| TTTCTTAGTCCAAGTTCTCG+GGG | - | chr4.1:5884112-5884131 | None:intergenic | 40.0% | |
| ! | AAAAAGCACGAGGAACAAGT+TGG | + | chr4.1:5885660-5885679 | MS.gene070339:CDS | 40.0% |
| ! | CTTCAAAATCTTGCTGTGGA+TGG | + | chr4.1:5884190-5884209 | MS.gene070339:CDS | 40.0% |
| ! | GGTATTTCTGCTTCTTTCTC+TGG | - | chr4.1:5887251-5887270 | None:intergenic | 40.0% |
| !! | AAGGAGCACCATTTGTTGTA+GGG | - | chr4.1:5884147-5884166 | None:intergenic | 40.0% |
| !! | AGCATCGGCTTCTTCATATT+TGG | + | chr4.1:5886454-5886473 | MS.gene070339:CDS | 40.0% |
| !! | TGAACTAGTTCTTGCTGTTC+AGG | + | chr4.1:5884711-5884730 | MS.gene070339:CDS | 40.0% |
| !!! | GATTTTGAAGCTCTGAAGAG+TGG | - | chr4.1:5884180-5884199 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTCCATTATCTCC+AGG | - | chr4.1:5882993-5883012 | None:intergenic | 40.0% |
| AAAGGAAAGCAAAAGAGGGC+AGG | + | chr4.1:5884453-5884472 | MS.gene070339:CDS | 45.0% | |
| AAGCCTCAAGAATGCTAGGA+AGG | + | chr4.1:5887451-5887470 | MS.gene070339:CDS | 45.0% | |
| ACCTATCCGCTCAAACCAAA+AGG | - | chr4.1:5886235-5886254 | None:intergenic | 45.0% | |
| AGCAGATCACAATTGGAAGG+TGG | + | chr4.1:5884583-5884602 | MS.gene070339:CDS | 45.0% | |
| AGCATCCACCCTACAACAAA+TGG | + | chr4.1:5884136-5884155 | MS.gene070339:CDS | 45.0% | |
| AGCCTCAAGAATGCTAGGAA+GGG | + | chr4.1:5887452-5887471 | MS.gene070339:CDS | 45.0% | |
| ATCAAGTCCAGAGCTTCCAT+CGG | - | chr4.1:5884086-5884105 | None:intergenic | 45.0% | |
| ATCGGAAGAAAATGGGGTTG+TGG | + | chr4.1:5887041-5887060 | MS.gene070339:CDS | 45.0% | |
| CAAGGATGAAGAGGAGAAAG+TGG | + | chr4.1:5885941-5885960 | MS.gene070339:CDS | 45.0% | |
| CAGATCACAATTGGAAGGTG+GGG | + | chr4.1:5884585-5884604 | MS.gene070339:CDS | 45.0% | |
| CAGTCATCAATGCACTTTGG+TGG | - | chr4.1:5886640-5886659 | None:intergenic | 45.0% | |
| CTCAAGTAAGTGTGTCTCCT+TGG | - | chr4.1:5884899-5884918 | None:intergenic | 45.0% | |
| CTGTTGCATCTGAACTGTCA+TGG | - | chr4.1:5885595-5885614 | None:intergenic | 45.0% | |
| GAACTTGGTCTGAGTATGGA+CGG | + | chr4.1:5884277-5884296 | MS.gene070339:CDS | 45.0% | |
| GAGATCTGACAGTTGAGTGA+TGG | + | chr4.1:5886369-5886388 | MS.gene070339:intron | 45.0% | |
| GATGCATCTCAAGGATGAAG+AGG | + | chr4.1:5885932-5885951 | MS.gene070339:CDS | 45.0% | |
| GCAATCTGGTGTGGATTCTT+TGG | + | chr4.1:5882953-5882972 | MS.gene070339:CDS | 45.0% | |
| GCAGATCACAATTGGAAGGT+GGG | + | chr4.1:5884584-5884603 | MS.gene070339:CDS | 45.0% | |
| GCTGATTGTAGGACATCTAG+TGG | + | chr4.1:5884037-5884056 | MS.gene070339:CDS | 45.0% | |
| GTGTCATCAGTCAAGAGGTT+TGG | + | chr4.1:5887063-5887082 | MS.gene070339:intron | 45.0% | |
| TAACATTTGCAGAGAGGAGG+AGG | + | chr4.1:5883663-5883682 | MS.gene070339:intron | 45.0% | |
| TAAGGATCAAAGCAGTGCCA+AGG | + | chr4.1:5884879-5884898 | MS.gene070339:CDS | 45.0% | |
| TCCAGCTCTTGTGTTTGCAT+TGG | - | chr4.1:5884011-5884030 | None:intergenic | 45.0% | |
| TCTGCTCTAACATTGCATCG+AGG | - | chr4.1:5884738-5884757 | None:intergenic | 45.0% | |
| ! | GTCCTCCAGTTCCTCAATTT+TGG | - | chr4.1:5886501-5886520 | None:intergenic | 45.0% |
| ! | TTTTCGCAAACGAAGGGATG+AGG | + | chr4.1:5884549-5884568 | MS.gene070339:CDS | 45.0% |
| !! | CTGGATTGAGTGCTGATTGT+AGG | + | chr4.1:5884026-5884045 | MS.gene070339:CDS | 45.0% |
| !! | GAAGGAGCACCATTTGTTGT+AGG | - | chr4.1:5884148-5884167 | None:intergenic | 45.0% |
| !! | TCAGAGCATTGCTTTGCCAA+AGG | + | chr4.1:5886538-5886557 | MS.gene070339:CDS | 45.0% |
| !! | TTGTGGTGTCATCAGTCAAG+AGG | + | chr4.1:5887058-5887077 | MS.gene070339:CDS | 45.0% |
| !!! | ACGCCCTTTTTTCTTCCCTA+TGG | + | chr4.1:5887106-5887125 | MS.gene070339:intron | 45.0% |
| !!! | TCCTTTTGGTTTGAGCGGAT+AGG | + | chr4.1:5886231-5886250 | MS.gene070339:intron | 45.0% |
| AGCCCTTCCTAGCATTCTTG+AGG | - | chr4.1:5887457-5887476 | None:intergenic | 50.0% | |
| AGGTTTCACTCATTGGGCCA+AGG | + | chr4.1:5883787-5883806 | MS.gene070339:intron | 50.0% | |
| AGTTGGCAGGGATTTCTCTG+AGG | + | chr4.1:5885677-5885696 | MS.gene070339:CDS | 50.0% | |
| ATGCAAATGAGACGGCTACC+AGG | + | chr4.1:5885430-5885449 | MS.gene070339:CDS | 50.0% | |
| ATGGGAACTTTCCCGAGGAA+GGG | - | chr4.1:5884326-5884345 | None:intergenic | 50.0% | |
| CAAAGCTTCCTCAGCTCGAA+TGG | - | chr4.1:5885322-5885341 | None:intergenic | 50.0% | |
| CCAGTTCCTCCTCTAACTTG+CGG | - | chr4.1:5885227-5885246 | None:intergenic | 50.0% | |
| CTTGATACTCCCCGAGAACT+TGG | + | chr4.1:5884100-5884119 | MS.gene070339:CDS | 50.0% | |
| GAACCAGATCCGCAAGTTAG+AGG | + | chr4.1:5885215-5885234 | MS.gene070339:CDS | 50.0% | |
| GAACTGGAGAAACAAGCCCA+AGG | + | chr4.1:5885240-5885259 | MS.gene070339:CDS | 50.0% | |
| GCAAATGTGCATGACTGCCA+TGG | - | chr4.1:5887229-5887248 | None:intergenic | 50.0% | |
| GCCAATGCAAACACAAGAGC+TGG | + | chr4.1:5884007-5884026 | MS.gene070339:CDS | 50.0% | |
| TCAAGTTCCGATGGAAGCTC+TGG | + | chr4.1:5884076-5884095 | MS.gene070339:CDS | 50.0% | |
| TCGTGTGCAGAAGAGACTAC+TGG | + | chr4.1:5885479-5885498 | MS.gene070339:CDS | 50.0% | |
| TGAGGAACTGGAGGACAAAG+TGG | + | chr4.1:5886505-5886524 | MS.gene070339:CDS | 50.0% | |
| TGTGCAGAAGAGACTACTGG+AGG | + | chr4.1:5885482-5885501 | MS.gene070339:CDS | 50.0% | |
| ! | CAAGGCTGAAGTTGCTGCTT+TGG | + | chr4.1:5884375-5884394 | MS.gene070339:CDS | 50.0% |
| ! | CTGGTTCTCAAGAGACTCGA+TGG | - | chr4.1:5885202-5885221 | None:intergenic | 50.0% |
| ! | TGCTCAGCTGGTTCAGAACT+TGG | + | chr4.1:5884262-5884281 | MS.gene070339:CDS | 50.0% |
| !! | GAGCACCATTTGTTGTAGGG+TGG | - | chr4.1:5884144-5884163 | None:intergenic | 50.0% |
| !! | GGAGACTGCTTTGGAAGCAT+CGG | + | chr4.1:5886439-5886458 | MS.gene070339:CDS | 50.0% |
| !! | TTGAAGCTCTGAAGAGTGGC+TGG | - | chr4.1:5884176-5884195 | None:intergenic | 50.0% |
| CCAGATCCGCAAGTTAGAGG+AGG | + | chr4.1:5885218-5885237 | MS.gene070339:CDS | 55.0% | |
| CCGCAAGTTAGAGGAGGAAC+TGG | + | chr4.1:5885224-5885243 | MS.gene070339:CDS | 55.0% | |
| CTCTACATCCGCTGCCTGAT+GGG | - | chr4.1:5884344-5884363 | None:intergenic | 55.0% | |
| CTCTCAAGATGCCCTTCCTC+GGG | + | chr4.1:5884312-5884331 | MS.gene070339:CDS | 55.0% | |
| GAAGAGTGGCTGGTGACTGA+AGG | - | chr4.1:5884166-5884185 | None:intergenic | 55.0% | |
| GAATGCTCTTCTCCTCCTCC+TGG | + | chr4.1:5885093-5885112 | MS.gene070339:CDS | 55.0% | |
| GATGGGAACTTTCCCGAGGA+AGG | - | chr4.1:5884327-5884346 | None:intergenic | 55.0% | |
| GCAAAGAGCCATTCGAGCTG+AGG | + | chr4.1:5885311-5885330 | MS.gene070339:CDS | 55.0% | |
| GCAGGTGGATGTGTCAGACA+TGG | + | chr4.1:5884402-5884421 | MS.gene070339:CDS | 55.0% | |
| GCTCTCAAGATGCCCTTCCT+CGG | + | chr4.1:5884311-5884330 | MS.gene070339:CDS | 55.0% | |
| GGAAAGTTCCCATCAGGCAG+CGG | + | chr4.1:5884333-5884352 | MS.gene070339:CDS | 55.0% | |
| GGAACTGGAGGACAAAGTGG+AGG | + | chr4.1:5886508-5886527 | MS.gene070339:CDS | 55.0% | |
| TCCTCGGGAAAGTTCCCATC+AGG | + | chr4.1:5884327-5884346 | MS.gene070339:CDS | 55.0% | |
| TCTCTACATCCGCTGCCTGA+TGG | - | chr4.1:5884345-5884364 | None:intergenic | 55.0% | |
| ! | AGCACGAGGAACAAGTTGGC+AGG | + | chr4.1:5885664-5885683 | MS.gene070339:CDS | 55.0% |
| ! | CCTCCTCTAACTTGCGGATC+TGG | - | chr4.1:5885221-5885240 | None:intergenic | 55.0% |
| ! | GCACGAGGAACAAGTTGGCA+GGG | + | chr4.1:5885665-5885684 | MS.gene070339:CDS | 55.0% |
| !! | CTGAAGTTGCTGCTTTGGCC+AGG | + | chr4.1:5884380-5884399 | MS.gene070339:CDS | 55.0% |
| AAGAGGGCAGGAGCTCGCAA+AGG | + | chr4.1:5884465-5884484 | MS.gene070339:CDS | 60.0% | |
| CATTTCCGGGACTGCTCAGC+TGG | + | chr4.1:5884250-5884269 | MS.gene070339:CDS | 60.0% | |
| CTGAACCAGCTGAGCAGTCC+CGG | - | chr4.1:5884258-5884277 | None:intergenic | 60.0% | |
| GCAGATGGAGCAGCTTGCAC+TGG | + | chr4.1:5884984-5885003 | MS.gene070339:CDS | 60.0% | |
| GCCTGATGGGAACTTTCCCG+AGG | - | chr4.1:5884331-5884350 | None:intergenic | 60.0% | |
| GTCTGACACATCCACCTGCC+TGG | - | chr4.1:5884401-5884420 | None:intergenic | 60.0% | |
| TGCTTCTGTCAGCGCTCTCC+TGG | - | chr4.1:5885451-5885470 | None:intergenic | 60.0% | |
| !! | AGTTGCTGCTTTGGCCAGGC+AGG | + | chr4.1:5884384-5884403 | MS.gene070339:CDS | 60.0% |
| !! | TGCTGCTTTGGCCAGGCAGG+TGG | + | chr4.1:5884387-5884406 | MS.gene070339:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 5882948 | 5887478 | 5882948 | ID=MS.gene070339 |
| chr4.1 | mRNA | 5882948 | 5887478 | 5882948 | ID=MS.gene070339.t1;Parent=MS.gene070339 |
| chr4.1 | exon | 5882948 | 5883115 | 5882948 | ID=MS.gene070339.t1.exon1;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5882948 | 5883115 | 5882948 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| chr4.1 | exon | 5883247 | 5883369 | 5883247 | ID=MS.gene070339.t1.exon2;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5883247 | 5883369 | 5883247 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| chr4.1 | exon | 5883521 | 5883558 | 5883521 | ID=MS.gene070339.t1.exon3;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5883521 | 5883558 | 5883521 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| chr4.1 | exon | 5883675 | 5883783 | 5883675 | ID=MS.gene070339.t1.exon4;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5883675 | 5883783 | 5883675 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| chr4.1 | exon | 5883962 | 5886217 | 5883962 | ID=MS.gene070339.t1.exon5;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5883962 | 5886217 | 5883962 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| chr4.1 | exon | 5886422 | 5886559 | 5886422 | ID=MS.gene070339.t1.exon6;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5886422 | 5886559 | 5886422 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| chr4.1 | exon | 5886952 | 5887079 | 5886952 | ID=MS.gene070339.t1.exon7;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5886952 | 5887079 | 5886952 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| chr4.1 | exon | 5887235 | 5887478 | 5887235 | ID=MS.gene070339.t1.exon8;Parent=MS.gene070339.t1 |
| chr4.1 | CDS | 5887235 | 5887478 | 5887235 | ID=cds.MS.gene070339.t1;Parent=MS.gene070339.t1 |
| Gene Sequence |
| Protein sequence |
