Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048777.t1 | XP_013447020.2 | 89 | 996 | 102 | 1 | 1 | 996 | 1 | 988 | 0.00E+00 | 1233.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048777.t1 | A0A396GWY6 | 89.0 | 996 | 102 | 1 | 1 | 996 | 1 | 988 | 0.0e+00 | 1233.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036437 | MS.gene048777 | PPI |
| MS.gene033776 | MS.gene048777 | PPI |
| MS.gene048777 | MS.gene48616 | PPI |
| MS.gene048777 | MS.gene35346 | PPI |
| MS.gene048777 | MS.gene67841 | PPI |
| MS.gene048777 | MS.gene94636 | PPI |
| MS.gene006300 | MS.gene048777 | PPI |
| MS.gene048777 | MS.gene93913 | PPI |
| MS.gene048777 | MS.gene93911 | PPI |
| MS.gene048777 | MS.gene043158 | PPI |
| MS.gene00106 | MS.gene048777 | PPI |
| MS.gene94379 | MS.gene048777 | PPI |
| MS.gene048777 | MS.gene058289 | PPI |
| MS.gene55940 | MS.gene048777 | PPI |
| MS.gene41427 | MS.gene048777 | PPI |
| MS.gene048777 | MS.gene34485 | PPI |
| MS.gene048777 | MS.gene91501 | PPI |
| MS.gene43975 | MS.gene048777 | PPI |
| MS.gene048777 | MS.gene073110 | PPI |
| MS.gene048777 | MS.gene005105 | PPI |
| MS.gene93915 | MS.gene048777 | PPI |
| MS.gene048777 | MS.gene49082 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048777.t1 | MTR_8g097350 | 90.571 | 1103 | 33 | 5 | 1 | 1103 | 1 | 1032 | 0.0 | 1977 |
| MS.gene048777.t1 | MTR_8g097350 | 96.432 | 981 | 27 | 1 | 1 | 981 | 1 | 973 | 0.0 | 1914 |
| MS.gene048777.t1 | MTR_5g010520 | 62.400 | 1125 | 338 | 10 | 1 | 1103 | 1 | 1062 | 0.0 | 1266 |
| MS.gene048777.t1 | MTR_5g010520 | 64.129 | 959 | 299 | 8 | 1 | 937 | 1 | 936 | 0.0 | 1126 |
| MS.gene048777.t1 | MTR_0415s0020 | 97.239 | 326 | 9 | 0 | 555 | 880 | 16 | 341 | 0.0 | 623 |
| MS.gene048777.t1 | MTR_0415s0010 | 93.377 | 302 | 12 | 1 | 183 | 484 | 1 | 294 | 0.0 | 547 |
| MS.gene048777.t1 | MTR_1g100633 | 37.806 | 775 | 395 | 12 | 1 | 766 | 1 | 697 | 6.06e-142 | 447 |
| MS.gene048777.t1 | MTR_1g100633 | 37.806 | 775 | 395 | 12 | 1 | 766 | 1 | 697 | 9.82e-142 | 446 |
| MS.gene048777.t1 | MTR_1g100633 | 37.806 | 775 | 395 | 12 | 1 | 766 | 1 | 697 | 2.85e-141 | 447 |
| MS.gene048777.t1 | MTR_1g100633 | 70.909 | 55 | 16 | 0 | 1048 | 1102 | 798 | 852 | 1.33e-15 | 82.4 |
| MS.gene048777.t1 | MTR_1g062200 | 26.226 | 469 | 301 | 14 | 1 | 456 | 1 | 437 | 4.57e-24 | 110 |
| MS.gene048777.t1 | MTR_1g062200 | 26.226 | 469 | 301 | 14 | 1 | 456 | 1 | 437 | 5.01e-24 | 110 |
| MS.gene048777.t1 | MTR_1g090807 | 23.246 | 499 | 327 | 14 | 5 | 479 | 30 | 496 | 7.43e-17 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048777.t1 | AT1G63300 | 45.181 | 1131 | 490 | 21 | 1 | 1103 | 1 | 1029 | 0.0 | 798 |
| MS.gene048777.t1 | AT5G41140 | 44.414 | 1110 | 474 | 20 | 1 | 1102 | 1 | 975 | 0.0 | 780 |
| MS.gene048777.t1 | AT5G41140 | 44.865 | 1110 | 476 | 21 | 1 | 1102 | 1 | 982 | 0.0 | 780 |
| MS.gene048777.t1 | AT5G52280 | 35.816 | 913 | 438 | 19 | 1 | 902 | 1 | 776 | 8.07e-137 | 435 |
| MS.gene048777.t1 | AT5G52280 | 30.790 | 367 | 189 | 17 | 786 | 1102 | 501 | 852 | 2.30e-13 | 75.1 |
| MS.gene048777.t1 | AT1G22060 | 26.188 | 989 | 544 | 33 | 3 | 929 | 6 | 870 | 1.21e-46 | 184 |
| MS.gene048777.t1 | AT1G22060 | 52.542 | 59 | 28 | 0 | 1045 | 1103 | 1927 | 1985 | 3.79e-11 | 68.6 |
| MS.gene048777.t1 | AT1G22060 | 26.188 | 989 | 544 | 33 | 3 | 929 | 6 | 870 | 1.21e-46 | 184 |
| MS.gene048777.t1 | AT1G22060 | 52.542 | 59 | 28 | 0 | 1045 | 1103 | 1927 | 1985 | 3.79e-11 | 68.6 |
Find 182 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTCCAGTTCCTCAATTT+TGG | 0.100815 | 4.2:+6654804 | None:intergenic |
| TTTAGTCTGTTTGTAATTAT+TGG | 0.149429 | 4.2:+6656520 | None:intergenic |
| AGCATCGGCTTCTTCATATT+TGG | 0.200944 | 4.2:-6654848 | MS.gene048777:CDS |
| TCTCAGATCTGTCATTTCTT+TGG | 0.222739 | 4.2:+6655128 | None:intergenic |
| CATCAATAAGAGAATGTTTC+AGG | 0.227998 | 4.2:+6655289 | None:intergenic |
| TCATGTATATCGGAAGAAAA+TGG | 0.240483 | 4.2:-6654289 | MS.gene048777:CDS |
| TCACTAAATTTCCCATTCTT+AGG | 0.251223 | 4.2:+6658205 | None:intergenic |
| TTCATGATGGAAATTGTAAA+TGG | 0.253945 | 4.2:-6658267 | MS.gene048777:CDS |
| GCAATCTGGTGTGGATTCTT+TGG | 0.281309 | 4.2:-6658350 | MS.gene048777:CDS |
| TTGGTACTCTCTATAGTTCC+TGG | 0.288824 | 4.2:-6658331 | MS.gene048777:CDS |
| TTATCAAAAGCTAGTATCTT+TGG | 0.299529 | 4.2:-6658052 | MS.gene048777:CDS |
| GGTATTTCTGCTTCTTTCTC+TGG | 0.307986 | 4.2:+6654074 | None:intergenic |
| TGAACTAGTTCTTGCTGTTC+AGG | 0.309083 | 4.2:-6656591 | MS.gene048777:CDS |
| CCATCTTATATGCAAATTCA+TGG | 0.311512 | 4.2:+6656270 | None:intergenic |
| TACAAGAAAATAGTGATAAA+AGG | 0.318196 | 4.2:-6657765 | MS.gene048777:intron |
| GGTCACTTGATGAGCTAAAT+AGG | 0.319780 | 4.2:-6655395 | MS.gene048777:CDS |
| TCTATAGTTCCTGGAGATAA+TGG | 0.322135 | 4.2:-6658322 | MS.gene048777:CDS |
| CAAGGCTGAAGTTGCTGCTT+TGG | 0.329744 | 4.2:-6656927 | MS.gene048777:CDS |
| TGAAGCTGTTAAGTTTAATC+AGG | 0.338510 | 4.2:-6658230 | MS.gene048777:CDS |
| CCTCCTCTAACTTGCGGATC+TGG | 0.350616 | 4.2:+6656084 | None:intergenic |
| TTGCCATTACTATCCATTAC+TGG | 0.360182 | 4.2:+6654053 | None:intergenic |
| ATCAGAGATCATCACATTTC+CGG | 0.360321 | 4.2:-6657066 | MS.gene048777:CDS |
| TGCTCAGCTGGTTCAGAACT+TGG | 0.368716 | 4.2:-6657040 | MS.gene048777:CDS |
| CTTGATACTCCCCGAGAACT+TGG | 0.369394 | 4.2:-6657202 | MS.gene048777:CDS |
| TCAGAGATCATCACATTTCC+GGG | 0.373245 | 4.2:-6657065 | MS.gene048777:CDS |
| CCGCAAGTTAGAGGAGGAAC+TGG | 0.375739 | 4.2:-6656078 | MS.gene048777:CDS |
| CAATGATACTTCATGTATAT+CGG | 0.381401 | 4.2:-6654299 | MS.gene048777:CDS |
| TTCAGAACTTGGTCTGAGTA+TGG | 0.384315 | 4.2:-6657029 | MS.gene048777:CDS |
| CATGTATATCGGAAGAAAAT+GGG | 0.384436 | 4.2:-6654288 | MS.gene048777:CDS |
| AACTTAACAGCTTCATAAAC+AGG | 0.386417 | 4.2:+6658238 | None:intergenic |
| TCAATCCAAAATTGAGGAAC+TGG | 0.391550 | 4.2:-6654809 | MS.gene048777:CDS |
| TATATCTCCAGTGCTTAAAT+AGG | 0.392273 | 4.2:+6657571 | None:intergenic |
| AACTCAATGATAGGAGCTTA+AGG | 0.401210 | 4.2:-6657595 | MS.gene048777:CDS |
| AGACGATGAACAGAAAGAAT+TGG | 0.403642 | 4.2:-6656456 | MS.gene048777:CDS |
| GCTTTCTCTAATCTTGTAGT+TGG | 0.404902 | 4.2:+6658295 | None:intergenic |
| CTAAGTCAGCTTCAAATCCT+TGG | 0.409289 | 4.2:+6656045 | None:intergenic |
| GAACCAGATCCGCAAGTTAG+AGG | 0.409504 | 4.2:-6656087 | MS.gene048777:CDS |
| CTCTACATCCGCTGCCTGAT+GGG | 0.410650 | 4.2:+6656961 | None:intergenic |
| CTCAAGTAAGTGTGTCTCCT+TGG | 0.410803 | 4.2:+6656406 | None:intergenic |
| TATTTCTTAGTCCAAGTTCT+CGG | 0.414133 | 4.2:+6657191 | None:intergenic |
| CTCAAATTTGCAGAGGTAGA+AGG | 0.414746 | 4.2:-6653924 | MS.gene048777:CDS |
| ATTTCTTAGTCCAAGTTCTC+GGG | 0.415269 | 4.2:+6657192 | None:intergenic |
| TCTTCAGTTCATCGTTAAGA+TGG | 0.416884 | 4.2:+6655229 | None:intergenic |
| TCAGATGCAACAGATGTTGT+TGG | 0.420026 | 4.2:-6655700 | MS.gene048777:CDS |
| CTGAAGTTGCTGCTTTGGCC+AGG | 0.421147 | 4.2:-6656922 | MS.gene048777:CDS |
| TGAAACACATATCCAGAATC+TGG | 0.422058 | 4.2:-6656174 | MS.gene048777:CDS |
| TACAATTGCTTTGTTGAAGA+AGG | 0.422105 | 4.2:-6655427 | MS.gene048777:CDS |
| CATTTCCGGGACTGCTCAGC+TGG | 0.426590 | 4.2:-6657052 | MS.gene048777:CDS |
| AGTGAGTAGCAGATCACAAT+TGG | 0.427743 | 4.2:-6656726 | MS.gene048777:CDS |
| TGCTTCTGTCAGCGCTCTCC+TGG | 0.429455 | 4.2:+6655854 | None:intergenic |
| TTTAATCAGGATCCTAAGAA+TGG | 0.430226 | 4.2:-6658217 | MS.gene048777:CDS |
| TCCCATCAAGAATTCTCATT+CGG | 0.430666 | 4.2:-6657969 | MS.gene048777:CDS |
| AGACATTTCTCCCTAAATCA+TGG | 0.435733 | 4.2:+6656492 | None:intergenic |
| AAAATCAAAGGAGACTGCTT+TGG | 0.436264 | 4.2:-6654872 | MS.gene048777:CDS |
| TTAAGCACTGGAGATATAGA+TGG | 0.437350 | 4.2:-6657566 | MS.gene048777:CDS |
| AGAATTGGATGAGCTTGTTA+AGG | 0.441376 | 4.2:-6656441 | MS.gene048777:CDS |
| TAAGTCAGCTTCAAATCCTT+GGG | 0.449405 | 4.2:+6656046 | None:intergenic |
| GAAGGAGCACCATTTGTTGT+AGG | 0.449517 | 4.2:+6657157 | None:intergenic |
| TCAAGTTCCGATGGAAGCTC+TGG | 0.453777 | 4.2:-6657226 | MS.gene048777:CDS |
| TCCAGCTCTTGTGTTTGCAT+TGG | 0.461122 | 4.2:+6657294 | None:intergenic |
| ACATGGAACTTCAAACTCTT+CGG | 0.462481 | 4.2:-6656883 | MS.gene048777:CDS |
| CTGAACCAGCTGAGCAGTCC+CGG | 0.463105 | 4.2:+6657047 | None:intergenic |
| AGTTGCTGCTTTGGCCAGGC+AGG | 0.463456 | 4.2:-6656918 | MS.gene048777:CDS |
| CTCTCAAGATGCCCTTCCTC+GGG | 0.464252 | 4.2:-6656990 | MS.gene048777:CDS |
| GGATGAATTCTCAAATTCTC+TGG | 0.465792 | 4.2:-6656129 | MS.gene048777:CDS |
| GTCTGACACATCCACCTGCC+TGG | 0.469758 | 4.2:+6656904 | None:intergenic |
| CCATGAATTTGCATATAAGA+TGG | 0.474720 | 4.2:-6656270 | MS.gene048777:CDS |
| GCCAATGCAAACACAAGAGC+TGG | 0.476631 | 4.2:-6657295 | MS.gene048777:CDS |
| CACATCTCTTGTGTTTGCAT+TGG | 0.480579 | 4.2:+6657321 | None:intergenic |
| TAATTTCAGGTGCTGCAATC+TGG | 0.483291 | 4.2:-6658364 | MS.gene048777:intron |
| TCATGATGGAAATTGTAAAT+GGG | 0.485115 | 4.2:-6658266 | MS.gene048777:CDS |
| AGCATCCACCCTACAACAAA+TGG | 0.485951 | 4.2:-6657166 | MS.gene048777:CDS |
| GCAGATGGAGCAGCTTGCAC+TGG | 0.486211 | 4.2:-6656318 | MS.gene048777:CDS |
| CTGGATTGAGTGCTGATTGT+AGG | 0.487970 | 4.2:-6657276 | MS.gene048777:CDS |
| AGAAGCAGAAATACCAGTAA+TGG | 0.488162 | 4.2:-6654066 | MS.gene048777:CDS |
| TCTCTACATCCGCTGCCTGA+TGG | 0.489393 | 4.2:+6656960 | None:intergenic |
| TCCTCGGGAAAGTTCCCATC+AGG | 0.490245 | 4.2:-6656975 | MS.gene048777:CDS |
| CTTCAAAATCTTGCTGTGGA+TGG | 0.491798 | 4.2:-6657112 | MS.gene048777:CDS |
| AGCACGAGGAACAAGTTGGC+AGG | 0.494013 | 4.2:-6655638 | MS.gene048777:CDS |
| GCTCTCAAGATGCCCTTCCT+CGG | 0.494210 | 4.2:-6656991 | MS.gene048777:CDS |
| TTGAAGCTCTGAAGAGTGGC+TGG | 0.496987 | 4.2:+6657129 | None:intergenic |
| TGCTGCTTTGGCCAGGCAGG+TGG | 0.498919 | 4.2:-6656915 | MS.gene048777:CDS |
| GAATGCTCTTCTCCTCCTCC+TGG | 0.498944 | 4.2:-6656209 | MS.gene048777:CDS |
| TTCGTTTGCGAAAAGATTTG+AGG | 0.499440 | 4.2:+6656762 | None:intergenic |
| AGAAATCTTAAGTTCTGACT+TGG | 0.501338 | 4.2:-6655526 | MS.gene048777:CDS |
| GGAGACTGCTTTGGAAGCAT+CGG | 0.501587 | 4.2:-6654863 | MS.gene048777:CDS |
| ATCGGAAGAAAATGGGGTTG+TGG | 0.503083 | 4.2:-6654281 | MS.gene048777:CDS |
| CAAAGCTTCCTCAGCTCGAA+TGG | 0.504131 | 4.2:+6655983 | None:intergenic |
| ATCAGTCAAAGCCGATTATG+AGG | 0.504634 | 4.2:-6655766 | MS.gene048777:CDS |
| ATCCGAATGAGAATTCTTGA+TGG | 0.505562 | 4.2:+6657967 | None:intergenic |
| TAACATTTGCAGAGAGGAGG+AGG | 0.507929 | 4.2:-6657639 | MS.gene048777:intron |
| TAAGAAGCCTCAAGAATGCT+AGG | 0.509109 | 4.2:-6653875 | MS.gene048777:CDS |
| AAATCAACTCAAGAAACAAT+CGG | 0.509218 | 4.2:-6656150 | MS.gene048777:CDS |
| ATGGTGAGATAGAGATGTAT+AGG | 0.523635 | 4.2:-6656364 | MS.gene048777:CDS |
| AGCCCTTCCTAGCATTCTTG+AGG | 0.524438 | 4.2:+6653868 | None:intergenic |
| ATCGTAAAGGAAAGCAAAAG+AGG | 0.525734 | 4.2:-6656854 | MS.gene048777:CDS |
| GGCTTCTTCATATTTGGAGA+AGG | 0.526343 | 4.2:-6654842 | MS.gene048777:CDS |
| AAGCCTCAAGAATGCTAGGA+AGG | 0.527879 | 4.2:-6653871 | MS.gene048777:CDS |
| AGTATGGACGGTTCAATACA+TGG | 0.528292 | 4.2:-6657013 | MS.gene048777:CDS |
| GGCTTCAAGAAGAATTCAAA+AGG | 0.530246 | 4.2:-6655923 | MS.gene048777:CDS |
| TTAATCAGGATCCTAAGAAT+GGG | 0.531828 | 4.2:-6658216 | MS.gene048777:CDS |
| AAGGAGCACCATTTGTTGTA+GGG | 0.532047 | 4.2:+6657158 | None:intergenic |
| TCGTGTGCAGAAGAGACTAC+TGG | 0.533605 | 4.2:-6655823 | MS.gene048777:CDS |
| ATGCAAATGAGACGGCTACC+AGG | 0.533949 | 4.2:-6655872 | MS.gene048777:CDS |
| TTAAGGACCTATTTAAGCAC+TGG | 0.534125 | 4.2:-6657578 | MS.gene048777:CDS |
| ATTCATTCAAAATGTTCAGA+TGG | 0.538552 | 4.2:-6658598 | None:intergenic |
| GACACATGACAAAGTTAAGC+AGG | 0.540859 | 4.2:-6656015 | MS.gene048777:CDS |
| GCAGATCACAATTGGAAGGT+GGG | 0.541610 | 4.2:-6656718 | MS.gene048777:CDS |
| GAAAGAAAGAGACAAATCAA+TGG | 0.549242 | 4.2:-6653991 | MS.gene048777:CDS |
| CAAGGATGAAGAGGAGAAAG+TGG | 0.551905 | 4.2:-6655361 | MS.gene048777:CDS |
| GATGGGAACTTTCCCGAGGA+AGG | 0.551943 | 4.2:+6656978 | None:intergenic |
| AAAGGAAAGCAAAAGAGGGC+AGG | 0.553150 | 4.2:-6656849 | MS.gene048777:CDS |
| GAGAAAGCTATAGTTCATGA+TGG | 0.553319 | 4.2:-6658280 | MS.gene048777:CDS |
| GGAAGTTATCAGCTTGAAAG+AGG | 0.554330 | 4.2:-6656816 | MS.gene048777:CDS |
| AGAACTTCAATCCAAAATTG+AGG | 0.555244 | 4.2:-6654815 | MS.gene048777:CDS |
| GACATTTCTCCCTAAATCAT+GGG | 0.557392 | 4.2:+6656493 | None:intergenic |
| TAACGATGAACTGAAGAAGA+AGG | 0.562401 | 4.2:-6655223 | MS.gene048777:CDS |
| GTGCTTCAAACAGGTTGTTG+CGG | 0.562680 | 4.2:-6654383 | MS.gene048777:intron |
| TCTTCGGAAACAAATCGTAA+AGG | 0.563402 | 4.2:-6656867 | MS.gene048777:CDS |
| AAGTCATTTATACCAGGAGG+AGG | 0.563516 | 4.2:+6656197 | None:intergenic |
| TTGTGGTGTCATCAGTCAAG+AGG | 0.564972 | 4.2:-6654264 | MS.gene048777:intron |
| AATTAACATTTGCAGAGAGG+AGG | 0.568188 | 4.2:-6657642 | MS.gene048777:intron |
| AGATGAGTTAGAGATGCAGA+TGG | 0.572394 | 4.2:-6656333 | MS.gene048777:CDS |
| GCTGATTGTAGGACATCTAG+TGG | 0.573852 | 4.2:-6657265 | MS.gene048777:CDS |
| AGCCTCAAGAATGCTAGGAA+GGG | 0.578599 | 4.2:-6653870 | MS.gene048777:CDS |
| CTCATTTGCATCAAATGTAG+TGG | 0.579737 | 4.2:+6655884 | None:intergenic |
| GGAAAGTTCCCATCAGGCAG+CGG | 0.580002 | 4.2:-6656969 | MS.gene048777:CDS |
| GTTTCAAAGTCATTTATACC+AGG | 0.583051 | 4.2:+6656191 | None:intergenic |
| ATGGGAACTTTCCCGAGGAA+GGG | 0.586539 | 4.2:+6656979 | None:intergenic |
| CAAAAGGCTATCAATGCAGA+TGG | 0.586827 | 4.2:-6655907 | MS.gene048777:CDS |
| GATGCATCTCAAGGATGAAG+AGG | 0.587248 | 4.2:-6655370 | MS.gene048777:CDS |
| GAGCACCATTTGTTGTAGGG+TGG | 0.591831 | 4.2:+6657161 | None:intergenic |
| ATACCAGTAATGGATAGTAA+TGG | 0.592797 | 4.2:-6654056 | MS.gene048777:CDS |
| TGAGGAACTGGAGGACAAAG+TGG | 0.595036 | 4.2:-6654797 | MS.gene048777:CDS |
| CATTCAAAATGTTCAGATGG+AGG | 0.595398 | 4.2:-6658595 | None:intergenic |
| CTGGTTCTCAAGAGACTCGA+TGG | 0.595679 | 4.2:+6656103 | None:intergenic |
| CCAGTTCCTCCTCTAACTTG+CGG | 0.595754 | 4.2:+6656078 | None:intergenic |
| GCAAAGAGCCATTCGAGCTG+AGG | 0.597598 | 4.2:-6655991 | MS.gene048777:CDS |
| AGCAGATCACAATTGGAAGG+TGG | 0.598653 | 4.2:-6656719 | MS.gene048777:CDS |
| TCCGAATGAGAATTCTTGAT+GGG | 0.599669 | 4.2:+6657968 | None:intergenic |
| GAAGAGTGGCTGGTGACTGA+AGG | 0.602498 | 4.2:+6657139 | None:intergenic |
| AGAGCTTCAAAATCTTGCTG+TGG | 0.602851 | 4.2:-6657116 | MS.gene048777:CDS |
| ATCCAAAATTGAGGAACTGG+AGG | 0.603562 | 4.2:-6654806 | MS.gene048777:CDS |
| ATTACAATGTCAAGTTCCGA+TGG | 0.606268 | 4.2:-6657235 | MS.gene048777:CDS |
| AAATAGGATGATGCATCTCA+AGG | 0.610535 | 4.2:-6655379 | MS.gene048777:CDS |
| ACAGGACCTGATAAAATCAA+AGG | 0.611635 | 4.2:-6654884 | MS.gene048777:intron |
| CTGTTGCATCTGAACTGTCA+TGG | 0.612030 | 4.2:+6655710 | None:intergenic |
| TACATTTGATGCAAATGAGA+CGG | 0.612659 | 4.2:-6655880 | MS.gene048777:CDS |
| GCACGAGGAACAAGTTGGCA+GGG | 0.612830 | 4.2:-6655637 | MS.gene048777:CDS |
| TCAGAGCATTGCTTTGCCAA+AGG | 0.613432 | 4.2:-6654764 | MS.gene048777:intron |
| CAGATCACAATTGGAAGGTG+GGG | 0.613615 | 4.2:-6656717 | MS.gene048777:CDS |
| TCAGGTGCTGCAATCTGGTG+TGG | 0.614625 | 4.2:-6658359 | MS.gene048777:intron |
| GAACTTGGTCTGAGTATGGA+CGG | 0.616193 | 4.2:-6657025 | MS.gene048777:CDS |
| GCAGGTGGATGTGTCAGACA+TGG | 0.623993 | 4.2:-6656900 | MS.gene048777:CDS |
| ATCAAGTCCAGAGCTTCCAT+CGG | 0.625295 | 4.2:+6657219 | None:intergenic |
| ACTTATGAAGAAATCACTTG+AGG | 0.632005 | 4.2:-6655502 | MS.gene048777:CDS |
| TCAAAGTCATTTATACCAGG+AGG | 0.633961 | 4.2:+6656194 | None:intergenic |
| TTTCCATCTCACTCTCACTC+AGG | 0.635068 | 4.2:-6658534 | MS.gene048777:intron |
| GTAATGGATAGTAATGGCAA+TGG | 0.635117 | 4.2:-6654050 | MS.gene048777:CDS |
| ACAAGAATTGAATCACGAGA+AGG | 0.636953 | 4.2:-6656666 | MS.gene048777:CDS |
| GTACCTGAGTGAGAGTGAGA+TGG | 0.637352 | 4.2:+6658531 | None:intergenic |
| AGTAGCAGATCACAATTGGA+AGG | 0.637940 | 4.2:-6656722 | MS.gene048777:CDS |
| TCGTAAAGGAAAGCAAAAGA+GGG | 0.638358 | 4.2:-6656853 | MS.gene048777:CDS |
| TTTCTTAGTCCAAGTTCTCG+GGG | 0.640293 | 4.2:+6657193 | None:intergenic |
| ATGTATATCGGAAGAAAATG+GGG | 0.640455 | 4.2:-6654287 | MS.gene048777:CDS |
| AAGAGGGCAGGAGCTCGCAA+AGG | 0.640963 | 4.2:-6656837 | MS.gene048777:CDS |
| ATTCAGTTAAAACGTTGCTG+AGG | 0.645034 | 4.2:+6654024 | None:intergenic |
| TAAGGATCAAAGCAGTGCCA+AGG | 0.648474 | 4.2:-6656423 | MS.gene048777:CDS |
| CCAGATCCGCAAGTTAGAGG+AGG | 0.652701 | 4.2:-6656084 | MS.gene048777:CDS |
| ATTACAGTTAAATAAGACAC+AGG | 0.657648 | 4.2:-6656624 | MS.gene048777:CDS |
| AATGAGTCTCAAATTTGCAG+AGG | 0.664150 | 4.2:-6653931 | MS.gene048777:CDS |
| TGTTGAAGAAGGAAGCAGAA+CGG | 0.665549 | 4.2:-6655416 | MS.gene048777:CDS |
| GCCTGATGGGAACTTTCCCG+AGG | 0.673014 | 4.2:+6656974 | None:intergenic |
| AAGGATGAAGAGGAGAAAGT+GGG | 0.675953 | 4.2:-6655360 | MS.gene048777:CDS |
| GAACTGGAGAAACAAGCCCA+AGG | 0.679568 | 4.2:-6656062 | MS.gene048777:CDS |
| TCAAACACTAACATGCAAGA+CGG | 0.686206 | 4.2:+6657943 | None:intergenic |
| GGAACTGGAGGACAAAGTGG+AGG | 0.698428 | 4.2:-6654794 | MS.gene048777:CDS |
| TGAGAATGAAAAGCTTACAG+TGG | 0.700759 | 4.2:-6655583 | MS.gene048777:CDS |
| AGTTGGCAGGGATTTCTCTG+AGG | 0.701615 | 4.2:-6655625 | MS.gene048777:CDS |
| TCTGCTCTAACATTGCATCG+AGG | 0.707967 | 4.2:+6656567 | None:intergenic |
| TGTGCAGAAGAGACTACTGG+AGG | 0.721029 | 4.2:-6655820 | MS.gene048777:CDS |
| AAAATGCTAATACTGCAGAG+AGG | 0.734559 | 4.2:-6655944 | MS.gene048777:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAACATAATTTTAACAAT+GGG | + | chr4.2:6655065-6655084 | None:intergenic | 15.0% |
| !!! | TTATTATTTTGTGATTTCAA+CGG | - | chr4.2:6654277-6654296 | MS.gene048777:CDS | 15.0% |
| !!! | TTCAAACATAATTTTAACAA+TGG | + | chr4.2:6655066-6655085 | None:intergenic | 15.0% |
| !! | AAATTTATTAGTGTCACAAT+TGG | + | chr4.2:6658292-6658311 | None:intergenic | 20.0% |
| !! | ACTAATGTTTGTATAATTTC+AGG | - | chr4.2:6654076-6654095 | MS.gene048777:CDS | 20.0% |
| !! | ATATATATATATGTCTTGCT+TGG | - | chr4.2:6657959-6657978 | MS.gene048777:CDS | 20.0% |
| !! | GTTATTGAATGGTTTATTTA+TGG | - | chr4.2:6658322-6658341 | MS.gene048777:CDS | 20.0% |
| !! | TAAGACAAATTATAAATGAC+AGG | + | chr4.2:6657844-6657863 | None:intergenic | 20.0% |
| !! | TACAAGAAAATAGTGATAAA+AGG | - | chr4.2:6654688-6654707 | MS.gene048777:intron | 20.0% |
| !! | TACAATAATGAATAATTCCT+TGG | + | chr4.2:6654958-6654977 | None:intergenic | 20.0% |
| !! | TTTAGTCTGTTTGTAATTAT+TGG | + | chr4.2:6655936-6655955 | None:intergenic | 20.0% |
| !!! | AATGATGAACAATTTTGAAT+TGG | + | chr4.2:6654020-6654039 | None:intergenic | 20.0% |
| ! | AAATCAACTCAAGAAACAAT+CGG | - | chr4.2:6656303-6656322 | MS.gene048777:CDS | 25.0% |
| ! | AATGTTAGAGCAGAAAAATA+AGG | - | chr4.2:6655895-6655914 | MS.gene048777:CDS | 25.0% |
| ! | AGAGAAAATAAAAATGCTTG+AGG | - | chr4.2:6657347-6657366 | MS.gene048777:intron | 25.0% |
| ! | ATTACAGTTAAATAAGACAC+AGG | - | chr4.2:6655829-6655848 | MS.gene048777:CDS | 25.0% |
| ! | CAAAATCTATATCCAGAAAA+GGG | + | chr4.2:6654744-6654763 | None:intergenic | 25.0% |
| ! | CAATGATACTTCATGTATAT+CGG | - | chr4.2:6658154-6658173 | MS.gene048777:intron | 25.0% |
| ! | CCAAAATTTCAACAATTTGA+AGG | + | chr4.2:6654562-6654581 | None:intergenic | 25.0% |
| ! | CTAGATGAAAATATCTATAG+AGG | + | chr4.2:6657445-6657464 | None:intergenic | 25.0% |
| ! | GCATATTTATTGCAGATATA+TGG | + | chr4.2:6658042-6658061 | None:intergenic | 25.0% |
| ! | TCAAAATCTATATCCAGAAA+AGG | + | chr4.2:6654745-6654764 | None:intergenic | 25.0% |
| ! | TCAATATATGTGTTGAGTAA+AGG | + | chr4.2:6654987-6655006 | None:intergenic | 25.0% |
| ! | TTATCAAAAGCTAGTATCTT+TGG | - | chr4.2:6654401-6654420 | MS.gene048777:intron | 25.0% |
| ! | TTATCAAGCATATTTCTCAA+AGG | + | chr4.2:6657409-6657428 | None:intergenic | 25.0% |
| ! | TTGATTGTGAATTTGTGATA+TGG | - | chr4.2:6654352-6654371 | MS.gene048777:CDS | 25.0% |
| !! | AAATAGTGATAAAAGGTATG+TGG | - | chr4.2:6654695-6654714 | MS.gene048777:intron | 25.0% |
| !! | AATAGTGATAAAAGGTATGT+GGG | - | chr4.2:6654696-6654715 | MS.gene048777:intron | 25.0% |
| !! | ATTCAGTTTTACCTCATAAT+CGG | + | chr4.2:6656701-6656720 | None:intergenic | 25.0% |
| !! | CCTTCAAATTGTTGAAATTT+TGG | - | chr4.2:6654559-6654578 | MS.gene048777:intron | 25.0% |
| !! | GATTCTTTTAAATACTCGAA+AGG | - | chr4.2:6656981-6657000 | MS.gene048777:CDS | 25.0% |
| !! | GGTAAATTTTCAAATCCTTT+TGG | - | chr4.2:6657368-6657387 | MS.gene048777:intron | 25.0% |
| !! | TATTTGTTCTATTTTGCCTA+GGG | - | chr4.2:6654377-6654396 | MS.gene048777:intron | 25.0% |
| !! | TCATGATGGAAATTGTAAAT+GGG | - | chr4.2:6654187-6654206 | MS.gene048777:intron | 25.0% |
| !! | TTATTTGTTCTATTTTGCCT+AGG | - | chr4.2:6654376-6654395 | MS.gene048777:intron | 25.0% |
| !! | TTCATGATGGAAATTGTAAA+TGG | - | chr4.2:6654186-6654205 | MS.gene048777:intron | 25.0% |
| !! | TTTTTCTTTCTAGATTTCAC+AGG | - | chr4.2:6655100-6655119 | MS.gene048777:intron | 25.0% |
| !!! | AAGGTTTTATCATGAATTGT+TGG | - | chr4.2:6657992-6658011 | MS.gene048777:CDS | 25.0% |
| !!! | ACTTAAGTTAGTTCTATCAA+AGG | + | chr4.2:6657498-6657517 | None:intergenic | 25.0% |
| !!! | AGTATTAGCATTTTTAAGTC+TGG | + | chr4.2:6656503-6656522 | None:intergenic | 25.0% |
| !!! | AGTTCTGATTTTTTGCTAAA+TGG | - | chr4.2:6654645-6654664 | MS.gene048777:intron | 25.0% |
| !!! | CTTAAGTTAGTTCTATCAAA+GGG | + | chr4.2:6657497-6657516 | None:intergenic | 25.0% |
| !!! | TCTTTTTGTTGTTGACTTTT+TGG | - | chr4.2:6654307-6654326 | MS.gene048777:CDS | 25.0% |
| !!! | TTTCTTATTTTCAAGTTGCA+TGG | + | chr4.2:6656794-6656813 | None:intergenic | 25.0% |
| AACTTAACAGCTTCATAAAC+AGG | + | chr4.2:6654218-6654237 | None:intergenic | 30.0% | |
| ACTAAAAACTCCCATGATTT+AGG | - | chr4.2:6655950-6655969 | MS.gene048777:CDS | 30.0% | |
| ACTTATGAAGAAATCACTTG+AGG | - | chr4.2:6656951-6656970 | MS.gene048777:CDS | 30.0% | |
| AGAACTTCAATCCAAAATTG+AGG | - | chr4.2:6657638-6657657 | MS.gene048777:intron | 30.0% | |
| AGAATGATGAAGAAATGTGA+AGG | + | chr4.2:6653955-6653974 | None:intergenic | 30.0% | |
| ATATGTGTTCTTAATGCCAT+AGG | + | chr4.2:6658256-6658275 | None:intergenic | 30.0% | |
| ATGTATATCGGAAGAAAATG+GGG | - | chr4.2:6658166-6658185 | MS.gene048777:intron | 30.0% | |
| CATAAAAACAGTTGAGTATG+AGG | + | chr4.2:6654773-6654792 | None:intergenic | 30.0% | |
| CATCAATAAGAGAATGTTTC+AGG | + | chr4.2:6657167-6657186 | None:intergenic | 30.0% | |
| CATGTATATCGGAAGAAAAT+GGG | - | chr4.2:6658165-6658184 | MS.gene048777:intron | 30.0% | |
| CCAAACAAAAACTCAATGAT+AGG | - | chr4.2:6654849-6654868 | MS.gene048777:CDS | 30.0% | |
| CCATCTTATATGCAAATTCA+TGG | + | chr4.2:6656186-6656205 | None:intergenic | 30.0% | |
| CCATGAATTTGCATATAAGA+TGG | - | chr4.2:6656183-6656202 | MS.gene048777:CDS | 30.0% | |
| CTAAAAACTCCCATGATTTA+GGG | - | chr4.2:6655951-6655970 | MS.gene048777:CDS | 30.0% | |
| CTTACTTGAGCAAAAAATCA+CGG | - | chr4.2:6656060-6656079 | MS.gene048777:CDS | 30.0% | |
| GAAAGAAAGAGACAAATCAA+TGG | - | chr4.2:6658462-6658481 | MS.gene048777:intron | 30.0% | |
| GGGATGATTATCTTGATTAT+TGG | - | chr4.2:6654717-6654736 | MS.gene048777:intron | 30.0% | |
| GTTAATTAACATTTGCAGAG+AGG | - | chr4.2:6654808-6654827 | MS.gene048777:CDS | 30.0% | |
| GTTTCAAAGTCATTTATACC+AGG | + | chr4.2:6656265-6656284 | None:intergenic | 30.0% | |
| TACATTTGATGCAAATGAGA+CGG | - | chr4.2:6656573-6656592 | MS.gene048777:CDS | 30.0% | |
| TATATCTCCAGTGCTTAAAT+AGG | + | chr4.2:6654885-6654904 | None:intergenic | 30.0% | |
| TATGTGTTCTTAATGCCATA+GGG | + | chr4.2:6658255-6658274 | None:intergenic | 30.0% | |
| TATTTCTTAGTCCAAGTTCT+CGG | + | chr4.2:6655265-6655284 | None:intergenic | 30.0% | |
| TCACTAAATTTCCCATTCTT+AGG | + | chr4.2:6654251-6654270 | None:intergenic | 30.0% | |
| TCATGTATATCGGAAGAAAA+TGG | - | chr4.2:6658164-6658183 | MS.gene048777:intron | 30.0% | |
| TGAAGCTGTTAAGTTTAATC+AGG | - | chr4.2:6654223-6654242 | MS.gene048777:intron | 30.0% | |
| TGTACAAATTGGTATACCTT+TGG | + | chr4.2:6657708-6657727 | None:intergenic | 30.0% | |
| TGTAGAGAATGAAAAACTCA+AGG | - | chr4.2:6655508-6655527 | MS.gene048777:CDS | 30.0% | |
| TGTGAACTGAAGTTATTGAA+TGG | - | chr4.2:6658311-6658330 | MS.gene048777:CDS | 30.0% | |
| TTAACAATGGGAATAGAAGA+AGG | + | chr4.2:6655053-6655072 | None:intergenic | 30.0% | |
| TTAATCAGGATCCTAAGAAT+GGG | - | chr4.2:6654237-6654256 | MS.gene048777:intron | 30.0% | |
| TTTAATCAGGATCCTAAGAA+TGG | - | chr4.2:6654236-6654255 | MS.gene048777:intron | 30.0% | |
| ! | AGAAATCTTAAGTTCTGACT+TGG | - | chr4.2:6656927-6656946 | MS.gene048777:CDS | 30.0% |
| ! | AGTTTTACTACTACAAGTGA+CGG | - | chr4.2:6658098-6658117 | MS.gene048777:intron | 30.0% |
| ! | ATAGTGATAAAAGGTATGTG+GGG | - | chr4.2:6654697-6654716 | MS.gene048777:intron | 30.0% |
| ! | CCTATCATTGAGTTTTTGTT+TGG | + | chr4.2:6654852-6654871 | None:intergenic | 30.0% |
| ! | TACAATTGCTTTGTTGAAGA+AGG | - | chr4.2:6657026-6657045 | MS.gene048777:CDS | 30.0% |
| ! | TGAAAATAAGAAAAAGCACG+AGG | - | chr4.2:6656801-6656820 | MS.gene048777:CDS | 30.0% |
| !! | AAAGTGATTCTTCTGAAGTA+AGG | - | chr4.2:6654918-6654937 | MS.gene048777:intron | 30.0% |
| !! | ATACCAGTAATGGATAGTAA+TGG | - | chr4.2:6658397-6658416 | MS.gene048777:intron | 30.0% |
| !! | CAAAATGATTTGCTTATGAC+AGG | - | chr4.2:6657551-6657570 | MS.gene048777:CDS | 30.0% |
| !!! | AATGGTTTTAGTCTCAATGT+AGG | + | chr4.2:6657268-6657287 | None:intergenic | 30.0% |
| !!! | ACTTTTTTGGTTAGTTGGAA+TGG | + | chr4.2:6657286-6657305 | None:intergenic | 30.0% |
| !!! | GAAGAATTGAAGCACTTTTT+TGG | + | chr4.2:6657299-6657318 | None:intergenic | 30.0% |
| !!! | GGACTATGAAATTTTGAAAC+AGG | - | chr4.2:6656156-6656175 | MS.gene048777:CDS | 30.0% |
| !!! | TGATTTTTTGCTAAATGGAC+AGG | - | chr4.2:6654650-6654669 | MS.gene048777:intron | 30.0% |
| AAAATCAAAGGAGACTGCTT+TGG | - | chr4.2:6657581-6657600 | MS.gene048777:CDS | 35.0% | |
| AAAATGCTAATACTGCAGAG+AGG | - | chr4.2:6656509-6656528 | MS.gene048777:CDS | 35.0% | |
| AAATAGGATGATGCATCTCA+AGG | - | chr4.2:6657074-6657093 | MS.gene048777:CDS | 35.0% | |
| AACTCAATGATAGGAGCTTA+AGG | - | chr4.2:6654858-6654877 | MS.gene048777:CDS | 35.0% | |
| AATGAGTCTCAAATTTGCAG+AGG | - | chr4.2:6658522-6658541 | MS.gene048777:intron | 35.0% | |
| AATGCCATAGGGAAGAAAAA+AGG | + | chr4.2:6658244-6658263 | None:intergenic | 35.0% | |
| AATTAACATTTGCAGAGAGG+AGG | - | chr4.2:6654811-6654830 | MS.gene048777:CDS | 35.0% | |
| ACAAGAATTGAATCACGAGA+AGG | - | chr4.2:6655787-6655806 | MS.gene048777:CDS | 35.0% | |
| ACAGGACCTGATAAAATCAA+AGG | - | chr4.2:6657569-6657588 | MS.gene048777:CDS | 35.0% | |
| ACATGGAACTTCAAACTCTT+CGG | - | chr4.2:6655570-6655589 | MS.gene048777:CDS | 35.0% | |
| AGAAGCAGAAATACCAGTAA+TGG | - | chr4.2:6658387-6658406 | MS.gene048777:intron | 35.0% | |
| AGACATTTCTCCCTAAATCA+TGG | + | chr4.2:6655964-6655983 | None:intergenic | 35.0% | |
| AGACGATGAACAGAAAGAAT+TGG | - | chr4.2:6655997-6656016 | MS.gene048777:CDS | 35.0% | |
| ATCAGAGATCATCACATTTC+CGG | - | chr4.2:6655387-6655406 | MS.gene048777:CDS | 35.0% | |
| ATCCGAATGAGAATTCTTGA+TGG | + | chr4.2:6654489-6654508 | None:intergenic | 35.0% | |
| ATCGTAAAGGAAAGCAAAAG+AGG | - | chr4.2:6655599-6655618 | MS.gene048777:CDS | 35.0% | |
| ATGCCATAGGGAAGAAAAAA+GGG | + | chr4.2:6658243-6658262 | None:intergenic | 35.0% | |
| ATGGTGAGATAGAGATGTAT+AGG | - | chr4.2:6656089-6656108 | MS.gene048777:CDS | 35.0% | |
| ATTACAATGTCAAGTTCCGA+TGG | - | chr4.2:6655218-6655237 | MS.gene048777:CDS | 35.0% | |
| ATTCAGTTAAAACGTTGCTG+AGG | + | chr4.2:6658432-6658451 | None:intergenic | 35.0% | |
| ATTTCTTAGTCCAAGTTCTC+GGG | + | chr4.2:6655264-6655283 | None:intergenic | 35.0% | |
| CAAAAAATCACGGATCTCTA+TGG | - | chr4.2:6656070-6656089 | MS.gene048777:CDS | 35.0% | |
| CATTGTTATGTGCTTCAAAC+AGG | - | chr4.2:6658061-6658080 | MS.gene048777:intron | 35.0% | |
| CTCATTTGCATCAAATGTAG+TGG | + | chr4.2:6656572-6656591 | None:intergenic | 35.0% | |
| CTTGCTTGGTATCTTGATTA+AGG | - | chr4.2:6657973-6657992 | MS.gene048777:CDS | 35.0% | |
| GAAGTAAGGTTTCACTCATT+GGG | - | chr4.2:6654932-6654951 | MS.gene048777:intron | 35.0% | |
| GACATTTCTCCCTAAATCAT+GGG | + | chr4.2:6655963-6655982 | None:intergenic | 35.0% | |
| GAGAAAGCTATAGTTCATGA+TGG | - | chr4.2:6654173-6654192 | MS.gene048777:intron | 35.0% | |
| GCTTTCTCTAATCTTGTAGT+TGG | + | chr4.2:6654161-6654180 | None:intergenic | 35.0% | |
| GGATGAATTCTCAAATTCTC+TGG | - | chr4.2:6656324-6656343 | MS.gene048777:CDS | 35.0% | |
| GGCTTCAAGAAGAATTCAAA+AGG | - | chr4.2:6656530-6656549 | MS.gene048777:CDS | 35.0% | |
| TAACGATGAACTGAAGAAGA+AGG | - | chr4.2:6657230-6657249 | MS.gene048777:CDS | 35.0% | |
| TAAGTCAGCTTCAAATCCTT+GGG | + | chr4.2:6656410-6656429 | None:intergenic | 35.0% | |
| TATCAGTCATCAATGCACTT+TGG | + | chr4.2:6657794-6657813 | None:intergenic | 35.0% | |
| TCAAACACTAACATGCAAGA+CGG | + | chr4.2:6654513-6654532 | None:intergenic | 35.0% | |
| TCAAAGTCATTTATACCAGG+AGG | + | chr4.2:6656262-6656281 | None:intergenic | 35.0% | |
| TCAATCCAAAATTGAGGAAC+TGG | - | chr4.2:6657644-6657663 | MS.gene048777:intron | 35.0% | |
| TCCCATCAAGAATTCTCATT+CGG | - | chr4.2:6654484-6654503 | MS.gene048777:intron | 35.0% | |
| TCCGAATGAGAATTCTTGAT+GGG | + | chr4.2:6654488-6654507 | None:intergenic | 35.0% | |
| TCGTAAAGGAAAGCAAAAGA+GGG | - | chr4.2:6655600-6655619 | MS.gene048777:CDS | 35.0% | |
| TCTATAGTTCCTGGAGATAA+TGG | - | chr4.2:6654131-6654150 | MS.gene048777:intron | 35.0% | |
| TCTTCAGTTCATCGTTAAGA+TGG | + | chr4.2:6657227-6657246 | None:intergenic | 35.0% | |
| TCTTCGGAAACAAATCGTAA+AGG | - | chr4.2:6655586-6655605 | MS.gene048777:CDS | 35.0% | |
| TGAAACACATATCCAGAATC+TGG | - | chr4.2:6656279-6656298 | MS.gene048777:CDS | 35.0% | |
| TGAAGTAAGGTTTCACTCAT+TGG | - | chr4.2:6654931-6654950 | MS.gene048777:intron | 35.0% | |
| TGAGAATGAAAAGCTTACAG+TGG | - | chr4.2:6656870-6656889 | MS.gene048777:CDS | 35.0% | |
| TTAAGGACCTATTTAAGCAC+TGG | - | chr4.2:6654875-6654894 | MS.gene048777:CDS | 35.0% | |
| TTCGTTTGCGAAAAGATTTG+AGG | + | chr4.2:6655694-6655713 | None:intergenic | 35.0% | |
| TTGCCATTACTATCCATTAC+TGG | + | chr4.2:6658403-6658422 | None:intergenic | 35.0% | |
| ! | AAGTGTTGCGATGTACAAAT+TGG | + | chr4.2:6657719-6657738 | None:intergenic | 35.0% |
| ! | CAAATCTTTTCGCAAACGAA+GGG | - | chr4.2:6655694-6655713 | MS.gene048777:CDS | 35.0% |
| ! | TATGGATCATTTTCTGTCCA+TGG | - | chr4.2:6658340-6658359 | MS.gene048777:CDS | 35.0% |
| ! | TCAAATCTTTTCGCAAACGA+AGG | - | chr4.2:6655693-6655712 | MS.gene048777:CDS | 35.0% |
| ! | TCTCAGATCTGTCATTTCTT+TGG | + | chr4.2:6657328-6657347 | None:intergenic | 35.0% |
| ! | TTGATTATTGGACCCTTTTC+TGG | - | chr4.2:6654729-6654748 | MS.gene048777:intron | 35.0% |
| !! | AGAATTGGATGAGCTTGTTA+AGG | - | chr4.2:6656012-6656031 | MS.gene048777:CDS | 35.0% |
| !! | CAGTCTCCTTTGATTTTATC+AGG | + | chr4.2:6657578-6657597 | None:intergenic | 35.0% |
| !! | GTAATGGATAGTAATGGCAA+TGG | - | chr4.2:6658403-6658422 | MS.gene048777:intron | 35.0% |
| !! | TTAAGCACTGGAGATATAGA+TGG | - | chr4.2:6654887-6654906 | MS.gene048777:intron | 35.0% |
| !!! | ACTAGCTTTTGATAATCCCT+AGG | + | chr4.2:6654396-6654415 | None:intergenic | 35.0% |
| !!! | GAAGCACTTTTTTGGTTAGT+TGG | + | chr4.2:6657291-6657310 | None:intergenic | 35.0% |
| !!! | GACAACTTTTGCTCTAAGAA+AGG | + | chr4.2:6655020-6655039 | None:intergenic | 35.0% |
| !!! | TCAAATCCTTTTGGTTTGAG+CGG | - | chr4.2:6657377-6657396 | MS.gene048777:intron | 35.0% |
| !!! | TGAGTTGATTTTCCAGATTC+TGG | + | chr4.2:6656294-6656313 | None:intergenic | 35.0% |
| !!! | TGTCATGGCATCTTTTTTGT+TGG | + | chr4.2:6656731-6656750 | None:intergenic | 35.0% |
| AAGGATGAAGAGGAGAAAGT+GGG | - | chr4.2:6657093-6657112 | MS.gene048777:CDS | 40.0% | |
| AAGTCATTTATACCAGGAGG+AGG | + | chr4.2:6656259-6656278 | None:intergenic | 40.0% | |
| AGAGCTTCAAAATCTTGCTG+TGG | - | chr4.2:6655337-6655356 | MS.gene048777:CDS | 40.0% | |
| AGATGAGTTAGAGATGCAGA+TGG | - | chr4.2:6656120-6656139 | MS.gene048777:CDS | 40.0% | |
| AGTAGCAGATCACAATTGGA+AGG | - | chr4.2:6655731-6655750 | MS.gene048777:CDS | 40.0% | |
| AGTATGGACGGTTCAATACA+TGG | - | chr4.2:6655440-6655459 | MS.gene048777:CDS | 40.0% | |
| AGTGAGTAGCAGATCACAAT+TGG | - | chr4.2:6655727-6655746 | MS.gene048777:CDS | 40.0% | |
| ATCAGTCAAAGCCGATTATG+AGG | - | chr4.2:6656687-6656706 | MS.gene048777:CDS | 40.0% | |
| ATCCAAAATTGAGGAACTGG+AGG | - | chr4.2:6657647-6657666 | MS.gene048777:intron | 40.0% | |
| CAAAAGGCTATCAATGCAGA+TGG | - | chr4.2:6656546-6656565 | MS.gene048777:CDS | 40.0% | |
| CACATCTCTTGTGTTTGCAT+TGG | + | chr4.2:6655135-6655154 | None:intergenic | 40.0% | |
| CTAAGTCAGCTTCAAATCCT+TGG | + | chr4.2:6656411-6656430 | None:intergenic | 40.0% | |
| CTCAAATTTGCAGAGGTAGA+AGG | - | chr4.2:6658529-6658548 | MS.gene048777:intron | 40.0% | |
| GACACATGACAAAGTTAAGC+AGG | - | chr4.2:6656438-6656457 | MS.gene048777:CDS | 40.0% | |
| GGAAGTTATCAGCTTGAAAG+AGG | - | chr4.2:6655637-6655656 | MS.gene048777:CDS | 40.0% | |
| GGCTTCTTCATATTTGGAGA+AGG | - | chr4.2:6657611-6657630 | MS.gene048777:CDS | 40.0% | |
| GGTCACTTGATGAGCTAAAT+AGG | - | chr4.2:6657058-6657077 | MS.gene048777:CDS | 40.0% | |
| TAAGAAGCCTCAAGAATGCT+AGG | - | chr4.2:6658578-6658597 | MS.gene048777:CDS | 40.0% | |
| TCAGAGATCATCACATTTCC+GGG | - | chr4.2:6655388-6655407 | MS.gene048777:CDS | 40.0% | |
| TCAGATGCAACAGATGTTGT+TGG | - | chr4.2:6656753-6656772 | MS.gene048777:CDS | 40.0% | |
| TGTTGAAGAAGGAAGCAGAA+CGG | - | chr4.2:6657037-6657056 | MS.gene048777:CDS | 40.0% | |
| TTCAGAACTTGGTCTGAGTA+TGG | - | chr4.2:6655424-6655443 | MS.gene048777:CDS | 40.0% | |
| TTGGTACTCTCTATAGTTCC+TGG | - | chr4.2:6654122-6654141 | MS.gene048777:intron | 40.0% | |
| TTTCTTAGTCCAAGTTCTCG+GGG | + | chr4.2:6655263-6655282 | None:intergenic | 40.0% | |
| ! | AAAAAGCACGAGGAACAAGT+TGG | - | chr4.2:6656811-6656830 | MS.gene048777:CDS | 40.0% |
| ! | CTTCAAAATCTTGCTGTGGA+TGG | - | chr4.2:6655341-6655360 | MS.gene048777:CDS | 40.0% |
| ! | GAATTGGTCTCGAGATAAGT+TGG | + | chr4.2:6654004-6654023 | None:intergenic | 40.0% |
| ! | GGTATTTCTGCTTCTTTCTC+TGG | + | chr4.2:6658382-6658401 | None:intergenic | 40.0% |
| ! | TAATTTCAGGTGCTGCAATC+TGG | - | chr4.2:6654089-6654108 | MS.gene048777:CDS | 40.0% |
| !! | AAGGAGCACCATTTGTTGTA+GGG | + | chr4.2:6655298-6655317 | None:intergenic | 40.0% |
| !! | AGCATCGGCTTCTTCATATT+TGG | - | chr4.2:6657605-6657624 | MS.gene048777:CDS | 40.0% |
| !! | TGAACTAGTTCTTGCTGTTC+AGG | - | chr4.2:6655862-6655881 | MS.gene048777:CDS | 40.0% |
| !!! | GATTTTGAAGCTCTGAAGAG+TGG | + | chr4.2:6655331-6655350 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTCCATTATCTCC+AGG | + | chr4.2:6654143-6654162 | None:intergenic | 40.0% |
| AAAGGAAAGCAAAAGAGGGC+AGG | - | chr4.2:6655604-6655623 | MS.gene048777:CDS | 45.0% | |
| AAGCCTCAAGAATGCTAGGA+AGG | - | chr4.2:6658582-6658601 | MS.gene048777:CDS | 45.0% | |
| ACCTATCCGCTCAAACCAAA+AGG | + | chr4.2:6657386-6657405 | None:intergenic | 45.0% | |
| AGCAGATCACAATTGGAAGG+TGG | - | chr4.2:6655734-6655753 | MS.gene048777:CDS | 45.0% | |
| AGCATCCACCCTACAACAAA+TGG | - | chr4.2:6655287-6655306 | MS.gene048777:CDS | 45.0% | |
| AGCCTCAAGAATGCTAGGAA+GGG | - | chr4.2:6658583-6658602 | MS.gene048777:CDS | 45.0% | |
| ATCAAGTCCAGAGCTTCCAT+CGG | + | chr4.2:6655237-6655256 | None:intergenic | 45.0% | |
| ATCGGAAGAAAATGGGGTTG+TGG | - | chr4.2:6658172-6658191 | MS.gene048777:intron | 45.0% | |
| ATCTCACTCTCACTCAGGTA+CGG | - | chr4.2:6653924-6653943 | MS.gene048777:CDS | 45.0% | |
| CAAGGATGAAGAGGAGAAAG+TGG | - | chr4.2:6657092-6657111 | MS.gene048777:CDS | 45.0% | |
| CAGATCACAATTGGAAGGTG+GGG | - | chr4.2:6655736-6655755 | MS.gene048777:CDS | 45.0% | |
| CAGTCATCAATGCACTTTGG+TGG | + | chr4.2:6657791-6657810 | None:intergenic | 45.0% | |
| CTCAAGTAAGTGTGTCTCCT+TGG | + | chr4.2:6656050-6656069 | None:intergenic | 45.0% | |
| CTGTTGCATCTGAACTGTCA+TGG | + | chr4.2:6656746-6656765 | None:intergenic | 45.0% | |
| GAACTTGGTCTGAGTATGGA+CGG | - | chr4.2:6655428-6655447 | MS.gene048777:CDS | 45.0% | |
| GAGATCTGACAGTTGAGTGA+TGG | - | chr4.2:6657520-6657539 | MS.gene048777:intron | 45.0% | |
| GATGCATCTCAAGGATGAAG+AGG | - | chr4.2:6657083-6657102 | MS.gene048777:CDS | 45.0% | |
| GCAATCTGGTGTGGATTCTT+TGG | - | chr4.2:6654103-6654122 | MS.gene048777:intron | 45.0% | |
| GCAGATCACAATTGGAAGGT+GGG | - | chr4.2:6655735-6655754 | MS.gene048777:CDS | 45.0% | |
| GCTGATTGTAGGACATCTAG+TGG | - | chr4.2:6655188-6655207 | MS.gene048777:CDS | 45.0% | |
| GTGCTTCAAACAGGTTGTTG+CGG | - | chr4.2:6658070-6658089 | MS.gene048777:intron | 45.0% | |
| GTGTCATCAGTCAAGAGGTT+TGG | - | chr4.2:6658194-6658213 | MS.gene048777:CDS | 45.0% | |
| TAACATTTGCAGAGAGGAGG+AGG | - | chr4.2:6654814-6654833 | MS.gene048777:CDS | 45.0% | |
| TAAGGATCAAAGCAGTGCCA+AGG | - | chr4.2:6656030-6656049 | MS.gene048777:CDS | 45.0% | |
| TCCAGCTCTTGTGTTTGCAT+TGG | + | chr4.2:6655162-6655181 | None:intergenic | 45.0% | |
| TCTGCTCTAACATTGCATCG+AGG | + | chr4.2:6655889-6655908 | None:intergenic | 45.0% | |
| TTTCCATCTCACTCTCACTC+AGG | - | chr4.2:6653919-6653938 | MS.gene048777:CDS | 45.0% | |
| ! | GTCCTCCAGTTCCTCAATTT+TGG | + | chr4.2:6657652-6657671 | None:intergenic | 45.0% |
| ! | TTTTCGCAAACGAAGGGATG+AGG | - | chr4.2:6655700-6655719 | MS.gene048777:CDS | 45.0% |
| !! | CTGGATTGAGTGCTGATTGT+AGG | - | chr4.2:6655177-6655196 | MS.gene048777:CDS | 45.0% |
| !! | GAAGGAGCACCATTTGTTGT+AGG | + | chr4.2:6655299-6655318 | None:intergenic | 45.0% |
| !! | TCAGAGCATTGCTTTGCCAA+AGG | - | chr4.2:6657689-6657708 | MS.gene048777:intron | 45.0% |
| !! | TTGTGGTGTCATCAGTCAAG+AGG | - | chr4.2:6658189-6658208 | MS.gene048777:CDS | 45.0% |
| !!! | ACGCCCTTTTTTCTTCCCTA+TGG | - | chr4.2:6658237-6658256 | MS.gene048777:CDS | 45.0% |
| !!! | TCCTTTTGGTTTGAGCGGAT+AGG | - | chr4.2:6657382-6657401 | MS.gene048777:intron | 45.0% |
| AGCCCTTCCTAGCATTCTTG+AGG | + | chr4.2:6658588-6658607 | None:intergenic | 50.0% | |
| AGGTTTCACTCATTGGGCCA+AGG | - | chr4.2:6654938-6654957 | MS.gene048777:intron | 50.0% | |
| AGTTGGCAGGGATTTCTCTG+AGG | - | chr4.2:6656828-6656847 | MS.gene048777:CDS | 50.0% | |
| ATGCAAATGAGACGGCTACC+AGG | - | chr4.2:6656581-6656600 | MS.gene048777:CDS | 50.0% | |
| ATGGGAACTTTCCCGAGGAA+GGG | + | chr4.2:6655477-6655496 | None:intergenic | 50.0% | |
| CAAAGCTTCCTCAGCTCGAA+TGG | + | chr4.2:6656473-6656492 | None:intergenic | 50.0% | |
| CCAGTTCCTCCTCTAACTTG+CGG | + | chr4.2:6656378-6656397 | None:intergenic | 50.0% | |
| CTTGATACTCCCCGAGAACT+TGG | - | chr4.2:6655251-6655270 | MS.gene048777:CDS | 50.0% | |
| GAACCAGATCCGCAAGTTAG+AGG | - | chr4.2:6656366-6656385 | MS.gene048777:CDS | 50.0% | |
| GAACTGGAGAAACAAGCCCA+AGG | - | chr4.2:6656391-6656410 | MS.gene048777:CDS | 50.0% | |
| GCAAATGTGCATGACTGCCA+TGG | + | chr4.2:6658360-6658379 | None:intergenic | 50.0% | |
| GCCAATGCAAACACAAGAGC+TGG | - | chr4.2:6655158-6655177 | MS.gene048777:CDS | 50.0% | |
| GTACCTGAGTGAGAGTGAGA+TGG | + | chr4.2:6653925-6653944 | None:intergenic | 50.0% | |
| TCAAGTTCCGATGGAAGCTC+TGG | - | chr4.2:6655227-6655246 | MS.gene048777:CDS | 50.0% | |
| TCGTGTGCAGAAGAGACTAC+TGG | - | chr4.2:6656630-6656649 | MS.gene048777:CDS | 50.0% | |
| TGAGGAACTGGAGGACAAAG+TGG | - | chr4.2:6657656-6657675 | MS.gene048777:intron | 50.0% | |
| TGTGCAGAAGAGACTACTGG+AGG | - | chr4.2:6656633-6656652 | MS.gene048777:CDS | 50.0% | |
| ! | CAAGGCTGAAGTTGCTGCTT+TGG | - | chr4.2:6655526-6655545 | MS.gene048777:CDS | 50.0% |
| ! | CTGGTTCTCAAGAGACTCGA+TGG | + | chr4.2:6656353-6656372 | None:intergenic | 50.0% |
| ! | TGCTCAGCTGGTTCAGAACT+TGG | - | chr4.2:6655413-6655432 | MS.gene048777:CDS | 50.0% |
| !! | GAGCACCATTTGTTGTAGGG+TGG | + | chr4.2:6655295-6655314 | None:intergenic | 50.0% |
| !! | GGAGACTGCTTTGGAAGCAT+CGG | - | chr4.2:6657590-6657609 | MS.gene048777:CDS | 50.0% |
| !! | TTGAAGCTCTGAAGAGTGGC+TGG | + | chr4.2:6655327-6655346 | None:intergenic | 50.0% |
| CCAGATCCGCAAGTTAGAGG+AGG | - | chr4.2:6656369-6656388 | MS.gene048777:CDS | 55.0% | |
| CCGCAAGTTAGAGGAGGAAC+TGG | - | chr4.2:6656375-6656394 | MS.gene048777:CDS | 55.0% | |
| CTCTACATCCGCTGCCTGAT+GGG | + | chr4.2:6655495-6655514 | None:intergenic | 55.0% | |
| CTCTCAAGATGCCCTTCCTC+GGG | - | chr4.2:6655463-6655482 | MS.gene048777:CDS | 55.0% | |
| GAAGAGTGGCTGGTGACTGA+AGG | + | chr4.2:6655317-6655336 | None:intergenic | 55.0% | |
| GAATGCTCTTCTCCTCCTCC+TGG | - | chr4.2:6656244-6656263 | MS.gene048777:CDS | 55.0% | |
| GATGGGAACTTTCCCGAGGA+AGG | + | chr4.2:6655478-6655497 | None:intergenic | 55.0% | |
| GCAAAGAGCCATTCGAGCTG+AGG | - | chr4.2:6656462-6656481 | MS.gene048777:CDS | 55.0% | |
| GCAGGTGGATGTGTCAGACA+TGG | - | chr4.2:6655553-6655572 | MS.gene048777:CDS | 55.0% | |
| GCTCTCAAGATGCCCTTCCT+CGG | - | chr4.2:6655462-6655481 | MS.gene048777:CDS | 55.0% | |
| GGAAAGTTCCCATCAGGCAG+CGG | - | chr4.2:6655484-6655503 | MS.gene048777:CDS | 55.0% | |
| GGAACTGGAGGACAAAGTGG+AGG | - | chr4.2:6657659-6657678 | MS.gene048777:intron | 55.0% | |
| TCCTCGGGAAAGTTCCCATC+AGG | - | chr4.2:6655478-6655497 | MS.gene048777:CDS | 55.0% | |
| TCTCTACATCCGCTGCCTGA+TGG | + | chr4.2:6655496-6655515 | None:intergenic | 55.0% | |
| ! | AGCACGAGGAACAAGTTGGC+AGG | - | chr4.2:6656815-6656834 | MS.gene048777:CDS | 55.0% |
| ! | CCTCCTCTAACTTGCGGATC+TGG | + | chr4.2:6656372-6656391 | None:intergenic | 55.0% |
| ! | GCACGAGGAACAAGTTGGCA+GGG | - | chr4.2:6656816-6656835 | MS.gene048777:CDS | 55.0% |
| ! | TCAGGTGCTGCAATCTGGTG+TGG | - | chr4.2:6654094-6654113 | MS.gene048777:intron | 55.0% |
| !! | CTGAAGTTGCTGCTTTGGCC+AGG | - | chr4.2:6655531-6655550 | MS.gene048777:CDS | 55.0% |
| AAGAGGGCAGGAGCTCGCAA+AGG | - | chr4.2:6655616-6655635 | MS.gene048777:CDS | 60.0% | |
| CATTTCCGGGACTGCTCAGC+TGG | - | chr4.2:6655401-6655420 | MS.gene048777:CDS | 60.0% | |
| CTGAACCAGCTGAGCAGTCC+CGG | + | chr4.2:6655409-6655428 | None:intergenic | 60.0% | |
| GCAGATGGAGCAGCTTGCAC+TGG | - | chr4.2:6656135-6656154 | MS.gene048777:CDS | 60.0% | |
| GCCTGATGGGAACTTTCCCG+AGG | + | chr4.2:6655482-6655501 | None:intergenic | 60.0% | |
| GTCTGACACATCCACCTGCC+TGG | + | chr4.2:6655552-6655571 | None:intergenic | 60.0% | |
| TGCTTCTGTCAGCGCTCTCC+TGG | + | chr4.2:6656602-6656621 | None:intergenic | 60.0% | |
| !! | AGTTGCTGCTTTGGCCAGGC+AGG | - | chr4.2:6655535-6655554 | MS.gene048777:CDS | 60.0% |
| !! | TGCTGCTTTGGCCAGGCAGG+TGG | - | chr4.2:6655538-6655557 | MS.gene048777:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6653866 | 6658609 | 6653866 | ID=MS.gene048777 |
| chr4.2 | mRNA | 6653866 | 6658609 | 6653866 | ID=MS.gene048777.t1;Parent=MS.gene048777 |
| chr4.2 | exon | 6658535 | 6658609 | 6658535 | ID=MS.gene048777.t1.exon1;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6658535 | 6658609 | 6658535 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6658177 | 6658377 | 6658177 | ID=MS.gene048777.t1.exon2;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6658177 | 6658377 | 6658177 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6657955 | 6658077 | 6657955 | ID=MS.gene048777.t1.exon3;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6657955 | 6658077 | 6657955 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6657766 | 6657803 | 6657766 | ID=MS.gene048777.t1.exon4;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6657766 | 6657803 | 6657766 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6657541 | 6657649 | 6657541 | ID=MS.gene048777.t1.exon5;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6657541 | 6657649 | 6657541 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6655107 | 6657362 | 6655107 | ID=MS.gene048777.t1.exon6;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6655107 | 6657362 | 6655107 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6654765 | 6654902 | 6654765 | ID=MS.gene048777.t1.exon7;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6654765 | 6654902 | 6654765 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6654265 | 6654392 | 6654265 | ID=MS.gene048777.t1.exon8;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6654265 | 6654392 | 6654265 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| chr4.2 | exon | 6653866 | 6654109 | 6653866 | ID=MS.gene048777.t1.exon9;Parent=MS.gene048777.t1 |
| chr4.2 | CDS | 6653866 | 6654109 | 6653866 | ID=cds.MS.gene048777.t1;Parent=MS.gene048777.t1 |
| Gene Sequence |
| Protein sequence |
