Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002195.t1 | XP_003593187.1 | 94.7 | 262 | 14 | 0 | 1 | 262 | 64 | 325 | 1.60E-139 | 505.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002195.t1 | P22196 | 85.1 | 262 | 39 | 0 | 1 | 262 | 69 | 330 | 6.5e-129 | 461.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002195.t1 | G7INU9 | 94.7 | 262 | 14 | 0 | 1 | 262 | 64 | 325 | 1.2e-139 | 505.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene002195 | MS.gene026111 | PPI |
| MS.gene051844 | MS.gene002195 | PPI |
| MS.gene051232 | MS.gene002195 | PPI |
| MS.gene036786 | MS.gene002195 | PPI |
| MS.gene002195 | MS.gene85778 | PPI |
| MS.gene002195 | MS.gene62417 | PPI |
| MS.gene002195 | MS.gene61508 | PPI |
| MS.gene24862 | MS.gene002195 | PPI |
| MS.gene002195 | MS.gene012253 | PPI |
| MS.gene025145 | MS.gene002195 | PPI |
| MS.gene54705 | MS.gene002195 | PPI |
| MS.gene012254 | MS.gene002195 | PPI |
| MS.gene002195 | MS.gene57129 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002195.t1 | MTR_2g008710 | 94.656 | 262 | 14 | 0 | 1 | 262 | 64 | 325 | 9.00e-179 | 494 |
| MS.gene002195.t1 | MTR_2g008730 | 96.296 | 243 | 9 | 0 | 20 | 262 | 59 | 301 | 8.66e-174 | 481 |
| MS.gene002195.t1 | MTR_4g114210 | 63.878 | 263 | 94 | 1 | 1 | 262 | 58 | 320 | 6.07e-125 | 358 |
| MS.gene002195.t1 | MTR_2g008160 | 51.894 | 264 | 124 | 3 | 1 | 262 | 61 | 323 | 1.66e-89 | 268 |
| MS.gene002195.t1 | MTR_4g125940 | 51.111 | 270 | 119 | 6 | 1 | 262 | 10 | 274 | 1.83e-83 | 251 |
| MS.gene002195.t1 | MTR_4g125940 | 51.111 | 270 | 119 | 6 | 1 | 262 | 65 | 329 | 1.10e-82 | 251 |
| MS.gene002195.t1 | MTR_2g088770 | 49.248 | 266 | 128 | 5 | 1 | 262 | 63 | 325 | 3.96e-80 | 244 |
| MS.gene002195.t1 | MTR_2g040000 | 48.889 | 270 | 126 | 5 | 1 | 262 | 66 | 331 | 6.73e-80 | 244 |
| MS.gene002195.t1 | MTR_1g025980 | 48.583 | 247 | 120 | 2 | 1 | 244 | 61 | 303 | 1.29e-79 | 243 |
| MS.gene002195.t1 | MTR_2g029750 | 49.814 | 269 | 124 | 5 | 1 | 262 | 66 | 330 | 4.95e-79 | 243 |
| MS.gene002195.t1 | MTR_2g028980 | 47.955 | 269 | 129 | 5 | 1 | 262 | 66 | 330 | 7.95e-79 | 242 |
| MS.gene002195.t1 | MTR_2g029830 | 47.955 | 269 | 129 | 5 | 1 | 262 | 65 | 329 | 9.45e-79 | 242 |
| MS.gene002195.t1 | MTR_2g029740 | 48.699 | 269 | 127 | 5 | 1 | 262 | 66 | 330 | 1.40e-78 | 241 |
| MS.gene002195.t1 | MTR_5g022870 | 46.538 | 260 | 132 | 2 | 1 | 257 | 60 | 315 | 1.93e-78 | 239 |
| MS.gene002195.t1 | MTR_2g029800 | 47.778 | 270 | 128 | 7 | 1 | 262 | 66 | 330 | 2.08e-78 | 241 |
| MS.gene002195.t1 | MTR_2g029815 | 47.955 | 269 | 129 | 5 | 1 | 262 | 66 | 330 | 2.82e-78 | 240 |
| MS.gene002195.t1 | MTR_8g075100 | 47.407 | 270 | 121 | 6 | 1 | 262 | 63 | 319 | 3.57e-78 | 239 |
| MS.gene002195.t1 | MTR_4g046713 | 46.816 | 267 | 133 | 4 | 1 | 262 | 64 | 326 | 3.75e-77 | 237 |
| MS.gene002195.t1 | MTR_2g029820 | 47.212 | 269 | 131 | 5 | 1 | 262 | 66 | 330 | 6.48e-77 | 237 |
| MS.gene002195.t1 | MTR_1g038680 | 48.708 | 271 | 126 | 7 | 1 | 262 | 66 | 332 | 6.56e-77 | 236 |
| MS.gene002195.t1 | MTR_2g029560 | 46.468 | 269 | 133 | 5 | 1 | 262 | 61 | 325 | 1.46e-76 | 236 |
| MS.gene002195.t1 | MTR_2g029730 | 46.840 | 269 | 132 | 5 | 1 | 262 | 62 | 326 | 3.17e-75 | 233 |
| MS.gene002195.t1 | MTR_5g017860 | 46.816 | 267 | 133 | 4 | 1 | 262 | 64 | 326 | 1.23e-74 | 230 |
| MS.gene002195.t1 | MTR_5g017850 | 46.442 | 267 | 134 | 4 | 1 | 262 | 64 | 326 | 1.42e-74 | 230 |
| MS.gene002195.t1 | MTR_5g021060 | 48.134 | 268 | 129 | 5 | 1 | 262 | 67 | 330 | 1.73e-74 | 230 |
| MS.gene002195.t1 | MTR_7g093370 | 47.037 | 270 | 131 | 5 | 1 | 262 | 106 | 371 | 3.56e-74 | 231 |
| MS.gene002195.t1 | MTR_7g072480 | 46.442 | 267 | 127 | 6 | 1 | 262 | 61 | 316 | 4.95e-74 | 228 |
| MS.gene002195.t1 | MTR_2g029860 | 46.840 | 269 | 132 | 5 | 1 | 262 | 66 | 330 | 1.09e-73 | 229 |
| MS.gene002195.t1 | MTR_1g086320 | 47.080 | 274 | 126 | 8 | 1 | 262 | 67 | 333 | 2.62e-73 | 227 |
| MS.gene002195.t1 | MTR_7g086820 | 45.865 | 266 | 130 | 6 | 1 | 262 | 57 | 312 | 2.78e-73 | 226 |
| MS.gene002195.t1 | MTR_1g101830 | 45.660 | 265 | 135 | 3 | 1 | 262 | 64 | 322 | 4.31e-73 | 226 |
| MS.gene002195.t1 | MTR_1g054205 | 45.556 | 270 | 135 | 6 | 1 | 262 | 61 | 326 | 6.12e-73 | 226 |
| MS.gene002195.t1 | MTR_7g107520 | 45.113 | 266 | 135 | 4 | 1 | 262 | 62 | 320 | 3.96e-72 | 224 |
| MS.gene002195.t1 | MTR_3g092990 | 45.455 | 275 | 126 | 6 | 1 | 262 | 63 | 326 | 9.84e-72 | 223 |
| MS.gene002195.t1 | MTR_2g029830 | 46.743 | 261 | 128 | 5 | 9 | 262 | 5 | 261 | 1.01e-71 | 221 |
| MS.gene002195.t1 | MTR_2g008160 | 45.455 | 264 | 106 | 3 | 1 | 262 | 61 | 288 | 1.64e-71 | 221 |
| MS.gene002195.t1 | MTR_5g074970 | 46.067 | 267 | 124 | 6 | 1 | 258 | 67 | 322 | 1.93e-71 | 222 |
| MS.gene002195.t1 | MTR_7g029030 | 44.195 | 267 | 136 | 5 | 1 | 262 | 62 | 320 | 2.94e-71 | 221 |
| MS.gene002195.t1 | MTR_0155s0040 | 43.774 | 265 | 133 | 5 | 1 | 262 | 64 | 315 | 3.15e-71 | 221 |
| MS.gene002195.t1 | MTR_2g084080 | 45.693 | 267 | 129 | 5 | 1 | 262 | 62 | 317 | 7.45e-71 | 220 |
| MS.gene002195.t1 | MTR_1g086490 | 46.996 | 283 | 120 | 9 | 1 | 262 | 67 | 340 | 8.24e-71 | 221 |
| MS.gene002195.t1 | MTR_1g115900 | 45.725 | 269 | 128 | 6 | 1 | 262 | 64 | 321 | 1.56e-70 | 220 |
| MS.gene002195.t1 | MTR_5g083860 | 44.981 | 269 | 130 | 6 | 1 | 262 | 68 | 325 | 4.07e-70 | 219 |
| MS.gene002195.t1 | MTR_8g076820 | 44.944 | 267 | 139 | 4 | 1 | 262 | 67 | 330 | 8.75e-70 | 218 |
| MS.gene002195.t1 | MTR_2g029850 | 44.981 | 269 | 137 | 5 | 1 | 262 | 66 | 330 | 1.82e-69 | 218 |
| MS.gene002195.t1 | MTR_2g084110 | 45.318 | 267 | 130 | 5 | 1 | 262 | 62 | 317 | 2.21e-69 | 216 |
| MS.gene002195.t1 | MTR_2g084000 | 45.149 | 268 | 130 | 6 | 1 | 262 | 63 | 319 | 2.40e-69 | 216 |
| MS.gene002195.t1 | MTR_7g072510 | 45.693 | 267 | 129 | 5 | 1 | 262 | 57 | 312 | 2.73e-69 | 216 |
| MS.gene002195.t1 | MTR_2g029910 | 44.815 | 270 | 137 | 6 | 1 | 262 | 67 | 332 | 3.09e-69 | 217 |
| MS.gene002195.t1 | MTR_4g122640 | 47.037 | 270 | 127 | 9 | 1 | 262 | 75 | 336 | 3.09e-69 | 217 |
| MS.gene002195.t1 | MTR_4g029190 | 44.981 | 269 | 130 | 6 | 1 | 262 | 83 | 340 | 3.14e-69 | 217 |
| MS.gene002195.t1 | MTR_4g029200 | 46.442 | 267 | 127 | 6 | 1 | 262 | 83 | 338 | 3.28e-69 | 217 |
| MS.gene002195.t1 | MTR_2g084010 | 45.693 | 267 | 130 | 5 | 1 | 262 | 62 | 318 | 1.29e-68 | 214 |
| MS.gene002195.t1 | MTR_4g029170 | 45.725 | 269 | 128 | 8 | 1 | 262 | 64 | 321 | 1.86e-68 | 214 |
| MS.gene002195.t1 | MTR_3g072190 | 46.269 | 268 | 126 | 6 | 1 | 262 | 63 | 318 | 2.64e-67 | 211 |
| MS.gene002195.t1 | MTR_3g094650 | 44.528 | 265 | 129 | 6 | 1 | 258 | 65 | 318 | 3.03e-67 | 211 |
| MS.gene002195.t1 | MTR_4g083710 | 46.125 | 271 | 127 | 8 | 1 | 262 | 64 | 324 | 1.28e-66 | 210 |
| MS.gene002195.t1 | MTR_4g133800 | 41.445 | 263 | 146 | 3 | 1 | 262 | 78 | 333 | 1.64e-66 | 210 |
| MS.gene002195.t1 | MTR_2g084020 | 44.569 | 267 | 133 | 5 | 1 | 262 | 62 | 318 | 3.36e-66 | 208 |
| MS.gene002195.t1 | MTR_3g466200 | 42.963 | 270 | 135 | 6 | 1 | 262 | 62 | 320 | 2.87e-65 | 206 |
| MS.gene002195.t1 | MTR_7g086870 | 43.774 | 265 | 134 | 5 | 1 | 262 | 59 | 311 | 1.14e-64 | 204 |
| MS.gene002195.t1 | MTR_1g077000 | 41.132 | 265 | 140 | 5 | 1 | 262 | 76 | 327 | 1.57e-64 | 204 |
| MS.gene002195.t1 | MTR_5g049280 | 42.491 | 273 | 141 | 9 | 1 | 262 | 70 | 337 | 1.73e-64 | 205 |
| MS.gene002195.t1 | MTR_6g027440 | 43.774 | 265 | 138 | 5 | 1 | 262 | 58 | 314 | 4.43e-64 | 203 |
| MS.gene002195.t1 | MTR_7g026990 | 44.944 | 267 | 130 | 6 | 1 | 262 | 68 | 322 | 5.48e-64 | 203 |
| MS.gene002195.t1 | MTR_4g087965 | 45.693 | 267 | 131 | 7 | 3 | 259 | 81 | 343 | 5.63e-64 | 204 |
| MS.gene002195.t1 | MTR_2g084090 | 44.030 | 268 | 133 | 6 | 1 | 262 | 62 | 318 | 7.64e-64 | 202 |
| MS.gene002195.t1 | MTR_4g029180 | 43.123 | 269 | 135 | 7 | 1 | 262 | 64 | 321 | 9.58e-64 | 202 |
| MS.gene002195.t1 | MTR_1g022970 | 43.494 | 269 | 141 | 5 | 1 | 262 | 83 | 347 | 1.00e-63 | 203 |
| MS.gene002195.t1 | MTR_2g437770 | 42.205 | 263 | 143 | 4 | 1 | 262 | 87 | 341 | 1.30e-63 | 202 |
| MS.gene002195.t1 | MTR_4g074995 | 45.556 | 270 | 117 | 9 | 1 | 262 | 61 | 308 | 2.55e-63 | 201 |
| MS.gene002195.t1 | MTR_3g092990 | 44.361 | 266 | 124 | 6 | 10 | 262 | 61 | 315 | 2.67e-63 | 201 |
| MS.gene002195.t1 | MTR_8g062780 | 42.751 | 269 | 143 | 5 | 1 | 262 | 60 | 324 | 2.59e-61 | 196 |
| MS.gene002195.t1 | MTR_3g072190 | 43.678 | 261 | 131 | 4 | 7 | 262 | 2 | 251 | 6.30e-61 | 193 |
| MS.gene002195.t1 | MTR_5g074740 | 44.444 | 270 | 132 | 8 | 1 | 262 | 62 | 321 | 7.67e-61 | 195 |
| MS.gene002195.t1 | MTR_2g078610 | 40.878 | 296 | 133 | 6 | 1 | 259 | 113 | 403 | 8.21e-61 | 197 |
| MS.gene002195.t1 | MTR_1g009750 | 41.264 | 269 | 147 | 5 | 1 | 262 | 64 | 328 | 9.29e-61 | 195 |
| MS.gene002195.t1 | MTR_1g090760 | 40.741 | 270 | 148 | 5 | 1 | 262 | 65 | 330 | 1.23e-60 | 195 |
| MS.gene002195.t1 | MTR_2g077990 | 40.541 | 296 | 134 | 6 | 1 | 259 | 113 | 403 | 2.37e-60 | 196 |
| MS.gene002195.t1 | MTR_3g094670 | 44.528 | 265 | 129 | 6 | 1 | 258 | 65 | 318 | 3.68e-60 | 193 |
| MS.gene002195.t1 | MTR_5g074760 | 43.333 | 270 | 135 | 8 | 1 | 262 | 62 | 321 | 5.29e-60 | 192 |
| MS.gene002195.t1 | MTR_4g095450 | 41.636 | 269 | 140 | 6 | 1 | 261 | 64 | 323 | 5.40e-60 | 192 |
| MS.gene002195.t1 | MTR_3g105790 | 43.985 | 266 | 140 | 4 | 1 | 262 | 62 | 322 | 2.68e-59 | 191 |
| MS.gene002195.t1 | MTR_2g099175 | 41.573 | 267 | 143 | 6 | 3 | 262 | 75 | 335 | 3.16e-59 | 191 |
| MS.gene002195.t1 | MTR_2g067440 | 39.590 | 293 | 138 | 6 | 1 | 259 | 97 | 384 | 3.17e-59 | 192 |
| MS.gene002195.t1 | MTR_3g094630 | 43.494 | 269 | 134 | 6 | 1 | 262 | 65 | 322 | 4.16e-59 | 190 |
| MS.gene002195.t1 | MTR_5g074860 | 42.910 | 268 | 131 | 9 | 1 | 258 | 66 | 321 | 4.52e-59 | 190 |
| MS.gene002195.t1 | MTR_4g127670 | 40.530 | 264 | 148 | 4 | 1 | 259 | 61 | 320 | 5.10e-58 | 187 |
| MS.gene002195.t1 | MTR_5g014100 | 41.544 | 272 | 146 | 6 | 1 | 262 | 63 | 331 | 1.02e-57 | 187 |
| MS.gene002195.t1 | MTR_5g016010 | 37.828 | 267 | 154 | 5 | 1 | 259 | 64 | 326 | 1.06e-57 | 187 |
| MS.gene002195.t1 | MTR_3g466180 | 43.446 | 267 | 135 | 5 | 1 | 262 | 68 | 323 | 5.51e-57 | 185 |
| MS.gene002195.t1 | MTR_4g074990 | 42.222 | 270 | 123 | 8 | 1 | 262 | 61 | 305 | 9.89e-57 | 184 |
| MS.gene002195.t1 | MTR_5g074710 | 41.481 | 270 | 140 | 8 | 1 | 262 | 62 | 321 | 1.42e-56 | 184 |
| MS.gene002195.t1 | MTR_2g078280 | 40.000 | 285 | 129 | 6 | 1 | 248 | 113 | 392 | 2.37e-56 | 185 |
| MS.gene002195.t1 | MTR_4g030890 | 40.449 | 267 | 147 | 6 | 1 | 262 | 137 | 396 | 1.01e-55 | 184 |
| MS.gene002195.t1 | MTR_3g467600 | 43.333 | 270 | 136 | 7 | 1 | 262 | 64 | 324 | 1.57e-55 | 181 |
| MS.gene002195.t1 | MTR_4g031140 | 40.226 | 266 | 147 | 6 | 2 | 262 | 66 | 324 | 1.77e-54 | 179 |
| MS.gene002195.t1 | MTR_6g043240 | 39.394 | 264 | 147 | 4 | 1 | 262 | 79 | 331 | 3.61e-54 | 179 |
| MS.gene002195.t1 | MTR_6g043280 | 37.594 | 266 | 151 | 5 | 1 | 262 | 78 | 332 | 1.29e-53 | 177 |
| MS.gene002195.t1 | MTR_2g067450 | 40.449 | 267 | 141 | 6 | 3 | 259 | 49 | 307 | 1.03e-52 | 174 |
| MS.gene002195.t1 | MTR_4g074980 | 40.824 | 267 | 119 | 9 | 1 | 262 | 62 | 294 | 2.83e-51 | 169 |
| MS.gene002195.t1 | MTR_6g043460 | 37.828 | 267 | 150 | 5 | 1 | 262 | 73 | 328 | 8.53e-51 | 170 |
| MS.gene002195.t1 | MTR_0147s0010 | 38.849 | 278 | 135 | 7 | 3 | 259 | 116 | 379 | 1.17e-50 | 170 |
| MS.gene002195.t1 | MTR_4g074980 | 46.970 | 198 | 91 | 6 | 1 | 190 | 62 | 253 | 3.79e-50 | 165 |
| MS.gene002195.t1 | MTR_1g009750 | 38.202 | 267 | 141 | 6 | 1 | 262 | 64 | 311 | 1.52e-49 | 166 |
| MS.gene002195.t1 | MTR_1g066710 | 34.831 | 267 | 158 | 6 | 3 | 262 | 66 | 323 | 4.64e-49 | 164 |
| MS.gene002195.t1 | MTR_3g105790 | 42.857 | 245 | 131 | 4 | 22 | 262 | 7 | 246 | 7.40e-49 | 162 |
| MS.gene002195.t1 | MTR_4g132490 | 37.313 | 268 | 156 | 5 | 1 | 262 | 66 | 327 | 8.98e-49 | 164 |
| MS.gene002195.t1 | MTR_0286s0010 | 38.519 | 270 | 152 | 8 | 1 | 262 | 71 | 334 | 1.11e-48 | 164 |
| MS.gene002195.t1 | MTR_6g008075 | 38.519 | 270 | 152 | 8 | 1 | 262 | 71 | 334 | 1.11e-48 | 164 |
| MS.gene002195.t1 | MTR_4g132110 | 35.955 | 267 | 155 | 5 | 3 | 262 | 71 | 328 | 4.58e-48 | 162 |
| MS.gene002195.t1 | MTR_2g008160 | 51.974 | 152 | 62 | 2 | 1 | 151 | 61 | 202 | 2.74e-47 | 156 |
| MS.gene002195.t1 | MTR_4g132110 | 35.294 | 272 | 155 | 6 | 3 | 262 | 71 | 333 | 9.81e-46 | 156 |
| MS.gene002195.t1 | MTR_1g066640 | 33.333 | 267 | 162 | 5 | 3 | 262 | 66 | 323 | 2.15e-45 | 155 |
| MS.gene002195.t1 | MTR_5g033470 | 35.165 | 273 | 161 | 8 | 1 | 262 | 110 | 377 | 1.08e-43 | 152 |
| MS.gene002195.t1 | MTR_1g066380 | 32.959 | 267 | 163 | 5 | 3 | 262 | 66 | 323 | 1.61e-43 | 150 |
| MS.gene002195.t1 | MTR_1g066680 | 32.584 | 267 | 164 | 5 | 3 | 262 | 65 | 322 | 3.45e-43 | 149 |
| MS.gene002195.t1 | MTR_1g066380 | 32.061 | 262 | 162 | 5 | 8 | 262 | 3 | 255 | 7.99e-40 | 139 |
| MS.gene002195.t1 | MTR_5g074700 | 41.453 | 234 | 109 | 9 | 33 | 262 | 5 | 214 | 1.91e-38 | 134 |
| MS.gene002195.t1 | MTR_5g074860 | 35.448 | 268 | 112 | 10 | 1 | 258 | 66 | 282 | 4.84e-38 | 135 |
| MS.gene002195.t1 | MTR_6g048160 | 88.060 | 67 | 8 | 0 | 3 | 69 | 22 | 88 | 9.74e-37 | 125 |
| MS.gene002195.t1 | MTR_2g077980 | 31.752 | 274 | 147 | 5 | 23 | 259 | 11 | 281 | 4.92e-32 | 119 |
| MS.gene002195.t1 | MTR_7g072490 | 34.263 | 251 | 97 | 7 | 9 | 255 | 1 | 187 | 3.34e-31 | 115 |
| MS.gene002195.t1 | MTR_2g029880 | 37.113 | 194 | 105 | 4 | 72 | 262 | 9 | 188 | 4.23e-31 | 115 |
| MS.gene002195.t1 | MTR_2g078560 | 33.333 | 228 | 114 | 5 | 65 | 259 | 95 | 317 | 1.98e-29 | 113 |
| MS.gene002195.t1 | MTR_3g072210 | 37.436 | 195 | 108 | 5 | 71 | 262 | 55 | 238 | 1.05e-28 | 109 |
| MS.gene002195.t1 | MTR_7g086790 | 36.269 | 193 | 98 | 6 | 11 | 199 | 17 | 188 | 2.84e-26 | 102 |
| MS.gene002195.t1 | MTR_5g058120 | 36.527 | 167 | 91 | 3 | 94 | 260 | 6 | 157 | 4.55e-26 | 102 |
| MS.gene002195.t1 | MTR_4g114220 | 66.216 | 74 | 17 | 2 | 2 | 73 | 41 | 108 | 9.55e-25 | 96.3 |
| MS.gene002195.t1 | MTR_3g072260 | 65.278 | 72 | 21 | 2 | 1 | 68 | 63 | 134 | 7.82e-23 | 91.3 |
| MS.gene002195.t1 | MTR_3g462850 | 35.862 | 145 | 82 | 6 | 124 | 262 | 10 | 149 | 1.31e-16 | 75.1 |
| MS.gene002195.t1 | MTR_1g089005 | 44.578 | 83 | 37 | 2 | 1 | 74 | 52 | 134 | 3.76e-13 | 65.9 |
| MS.gene002195.t1 | MTR_7g086810 | 40.506 | 79 | 25 | 1 | 1 | 79 | 43 | 99 | 6.12e-13 | 67.0 |
| MS.gene002195.t1 | MTR_1g098320 | 42.683 | 82 | 43 | 1 | 181 | 262 | 47 | 124 | 2.10e-12 | 63.5 |
| MS.gene002195.t1 | MTR_7g086785 | 38.095 | 84 | 49 | 1 | 7 | 87 | 1 | 84 | 3.33e-12 | 62.8 |
| MS.gene002195.t1 | MTR_6g071110 | 44.565 | 92 | 35 | 4 | 28 | 114 | 81 | 161 | 4.77e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002195.t1 | AT2G41480 | 65.779 | 263 | 89 | 1 | 1 | 262 | 66 | 328 | 1.02e-127 | 365 |
| MS.gene002195.t1 | AT5G64120 | 67.176 | 262 | 81 | 2 | 1 | 262 | 72 | 328 | 1.13e-124 | 358 |
| MS.gene002195.t1 | AT5G39580 | 65.019 | 263 | 86 | 3 | 1 | 262 | 62 | 319 | 1.89e-119 | 344 |
| MS.gene002195.t1 | AT5G64110 | 60.687 | 262 | 101 | 2 | 1 | 262 | 71 | 330 | 8.11e-112 | 325 |
| MS.gene002195.t1 | AT5G64100 | 62.214 | 262 | 95 | 3 | 1 | 262 | 74 | 331 | 1.63e-110 | 322 |
| MS.gene002195.t1 | AT4G25980 | 50.758 | 264 | 128 | 2 | 1 | 262 | 63 | 326 | 8.33e-96 | 284 |
| MS.gene002195.t1 | AT1G77100 | 49.057 | 265 | 126 | 3 | 1 | 262 | 61 | 319 | 7.80e-82 | 248 |
| MS.gene002195.t1 | AT3G01190 | 48.864 | 264 | 128 | 5 | 1 | 262 | 63 | 321 | 8.77e-81 | 246 |
| MS.gene002195.t1 | AT1G05240 | 47.328 | 262 | 133 | 4 | 1 | 259 | 63 | 322 | 1.36e-80 | 246 |
| MS.gene002195.t1 | AT1G05250 | 47.328 | 262 | 133 | 4 | 1 | 259 | 63 | 322 | 1.36e-80 | 246 |
| MS.gene002195.t1 | AT1G05260 | 48.120 | 266 | 131 | 5 | 1 | 262 | 63 | 325 | 9.27e-79 | 241 |
| MS.gene002195.t1 | AT5G17820 | 48.092 | 262 | 127 | 3 | 1 | 262 | 61 | 313 | 9.94e-79 | 240 |
| MS.gene002195.t1 | AT4G11290 | 47.015 | 268 | 133 | 4 | 1 | 262 | 62 | 326 | 1.72e-77 | 238 |
| MS.gene002195.t1 | AT5G17820 | 48.092 | 262 | 127 | 3 | 1 | 262 | 114 | 366 | 1.99e-77 | 239 |
| MS.gene002195.t1 | AT5G06720 | 47.584 | 269 | 130 | 5 | 1 | 262 | 69 | 333 | 6.53e-77 | 236 |
| MS.gene002195.t1 | AT5G19890 | 47.191 | 267 | 130 | 4 | 1 | 262 | 67 | 327 | 6.79e-77 | 236 |
| MS.gene002195.t1 | AT5G19880 | 48.897 | 272 | 125 | 7 | 1 | 262 | 62 | 329 | 1.22e-76 | 236 |
| MS.gene002195.t1 | AT5G42180 | 45.594 | 261 | 132 | 3 | 1 | 258 | 60 | 313 | 2.35e-76 | 234 |
| MS.gene002195.t1 | AT5G15180 | 45.283 | 265 | 138 | 4 | 1 | 262 | 69 | 329 | 4.35e-74 | 229 |
| MS.gene002195.t1 | AT4G08770 | 46.520 | 273 | 129 | 8 | 1 | 262 | 61 | 327 | 4.67e-73 | 227 |
| MS.gene002195.t1 | AT4G36430 | 45.896 | 268 | 135 | 5 | 1 | 262 | 67 | 330 | 6.63e-73 | 226 |
| MS.gene002195.t1 | AT5G06730 | 46.097 | 269 | 134 | 5 | 1 | 262 | 70 | 334 | 2.69e-72 | 225 |
| MS.gene002195.t1 | AT2G38380 | 46.296 | 270 | 133 | 6 | 1 | 262 | 68 | 333 | 4.21e-71 | 222 |
| MS.gene002195.t1 | AT1G44970 | 47.584 | 269 | 130 | 5 | 1 | 262 | 82 | 346 | 5.01e-71 | 222 |
| MS.gene002195.t1 | AT5G51890 | 45.385 | 260 | 130 | 5 | 1 | 255 | 63 | 315 | 8.94e-71 | 220 |
| MS.gene002195.t1 | AT4G08780 | 44.689 | 273 | 134 | 7 | 1 | 262 | 61 | 327 | 1.01e-70 | 221 |
| MS.gene002195.t1 | AT1G49570 | 46.241 | 266 | 131 | 6 | 1 | 258 | 85 | 346 | 1.52e-70 | 221 |
| MS.gene002195.t1 | AT5G66390 | 45.149 | 268 | 137 | 5 | 1 | 262 | 70 | 333 | 1.55e-70 | 220 |
| MS.gene002195.t1 | AT5G14130 | 46.816 | 267 | 132 | 5 | 1 | 262 | 69 | 330 | 2.03e-70 | 220 |
| MS.gene002195.t1 | AT1G14550 | 46.097 | 269 | 128 | 6 | 1 | 262 | 63 | 321 | 3.87e-70 | 219 |
| MS.gene002195.t1 | AT3G03670 | 46.667 | 270 | 128 | 6 | 1 | 262 | 60 | 321 | 3.91e-70 | 219 |
| MS.gene002195.t1 | AT3G50990 | 45.896 | 268 | 135 | 4 | 1 | 262 | 78 | 341 | 6.01e-70 | 219 |
| MS.gene002195.t1 | AT2G18150 | 44.030 | 268 | 140 | 5 | 1 | 262 | 73 | 336 | 6.56e-70 | 219 |
| MS.gene002195.t1 | AT5G14130 | 47.388 | 268 | 129 | 6 | 1 | 262 | 110 | 371 | 7.74e-70 | 219 |
| MS.gene002195.t1 | AT5G05340 | 46.038 | 265 | 125 | 6 | 1 | 258 | 67 | 320 | 3.13e-69 | 216 |
| MS.gene002195.t1 | AT4G26010 | 46.617 | 266 | 123 | 7 | 1 | 262 | 59 | 309 | 3.98e-69 | 216 |
| MS.gene002195.t1 | AT2G18140 | 44.403 | 268 | 139 | 5 | 1 | 262 | 72 | 335 | 5.43e-69 | 216 |
| MS.gene002195.t1 | AT4G26010 | 46.617 | 266 | 123 | 7 | 1 | 262 | 87 | 337 | 7.48e-69 | 216 |
| MS.gene002195.t1 | AT3G21770 | 44.487 | 263 | 139 | 4 | 1 | 259 | 66 | 325 | 1.29e-68 | 215 |
| MS.gene002195.t1 | AT2G38390 | 44.074 | 270 | 139 | 6 | 1 | 262 | 68 | 333 | 5.16e-67 | 211 |
| MS.gene002195.t1 | AT5G24070 | 43.233 | 266 | 139 | 5 | 3 | 262 | 76 | 335 | 4.09e-66 | 209 |
| MS.gene002195.t1 | AT4G16270 | 44.776 | 268 | 136 | 6 | 1 | 262 | 87 | 348 | 1.61e-65 | 207 |
| MS.gene002195.t1 | AT5G22410 | 42.966 | 263 | 139 | 5 | 1 | 258 | 65 | 321 | 2.55e-65 | 207 |
| MS.gene002195.t1 | AT1G30870 | 44.361 | 266 | 132 | 4 | 3 | 262 | 90 | 345 | 5.02e-65 | 206 |
| MS.gene002195.t1 | AT4G33420 | 41.509 | 265 | 139 | 4 | 1 | 262 | 74 | 325 | 2.79e-64 | 204 |
| MS.gene002195.t1 | AT3G32980 | 43.015 | 272 | 140 | 7 | 1 | 262 | 68 | 334 | 5.48e-64 | 204 |
| MS.gene002195.t1 | AT4G33420 | 41.509 | 265 | 139 | 4 | 1 | 262 | 121 | 372 | 8.72e-64 | 204 |
| MS.gene002195.t1 | AT1G14540 | 45.149 | 268 | 131 | 7 | 1 | 262 | 58 | 315 | 1.30e-63 | 202 |
| MS.gene002195.t1 | AT3G49120 | 43.750 | 272 | 138 | 8 | 1 | 262 | 69 | 335 | 1.90e-63 | 202 |
| MS.gene002195.t1 | AT1G68850 | 40.511 | 274 | 146 | 9 | 1 | 262 | 67 | 335 | 4.55e-63 | 201 |
| MS.gene002195.t1 | AT4G33870 | 38.514 | 296 | 139 | 6 | 3 | 259 | 107 | 398 | 5.38e-63 | 203 |
| MS.gene002195.t1 | AT4G31760 | 42.164 | 268 | 142 | 4 | 1 | 262 | 66 | 326 | 1.93e-62 | 199 |
| MS.gene002195.t1 | AT4G37530 | 41.852 | 270 | 145 | 5 | 1 | 262 | 64 | 329 | 3.35e-62 | 199 |
| MS.gene002195.t1 | AT5G39580 | 70.370 | 135 | 40 | 0 | 1 | 135 | 62 | 196 | 6.40e-62 | 195 |
| MS.gene002195.t1 | AT1G71695 | 44.074 | 270 | 132 | 7 | 1 | 262 | 81 | 339 | 1.04e-61 | 198 |
| MS.gene002195.t1 | AT2G43480 | 41.729 | 266 | 143 | 5 | 3 | 262 | 76 | 335 | 1.61e-61 | 197 |
| MS.gene002195.t1 | AT5G58400 | 44.361 | 266 | 129 | 7 | 1 | 258 | 67 | 321 | 3.78e-61 | 196 |
| MS.gene002195.t1 | AT3G49110 | 42.279 | 272 | 142 | 7 | 1 | 262 | 70 | 336 | 7.39e-61 | 196 |
| MS.gene002195.t1 | AT2G18980 | 40.602 | 266 | 150 | 4 | 1 | 262 | 62 | 323 | 3.44e-60 | 193 |
| MS.gene002195.t1 | AT4G37520 | 40.370 | 270 | 149 | 5 | 1 | 262 | 64 | 329 | 1.70e-59 | 192 |
| MS.gene002195.t1 | AT5G58390 | 40.977 | 266 | 138 | 6 | 1 | 258 | 58 | 312 | 8.12e-59 | 189 |
| MS.gene002195.t1 | AT2G35380 | 43.704 | 270 | 143 | 6 | 1 | 262 | 67 | 335 | 1.48e-58 | 189 |
| MS.gene002195.t1 | AT2G24800 | 43.774 | 265 | 139 | 5 | 3 | 262 | 70 | 329 | 1.73e-58 | 189 |
| MS.gene002195.t1 | AT2G39040 | 41.758 | 273 | 143 | 6 | 1 | 262 | 83 | 350 | 2.55e-58 | 189 |
| MS.gene002195.t1 | AT5G67400 | 40.370 | 270 | 149 | 5 | 1 | 262 | 64 | 329 | 2.77e-58 | 189 |
| MS.gene002195.t1 | AT4G30170 | 40.075 | 267 | 150 | 5 | 1 | 262 | 64 | 325 | 3.67e-58 | 188 |
| MS.gene002195.t1 | AT4G17690 | 42.007 | 269 | 140 | 6 | 1 | 262 | 63 | 322 | 4.15e-58 | 188 |
| MS.gene002195.t1 | AT3G28200 | 40.959 | 271 | 139 | 7 | 1 | 262 | 58 | 316 | 9.79e-58 | 187 |
| MS.gene002195.t1 | AT2G34060 | 41.328 | 271 | 145 | 6 | 1 | 261 | 79 | 345 | 3.91e-57 | 186 |
| MS.gene002195.t1 | AT4G37520 | 39.630 | 270 | 148 | 6 | 1 | 262 | 64 | 326 | 5.44e-57 | 185 |
| MS.gene002195.t1 | AT5G40150 | 40.741 | 270 | 142 | 7 | 1 | 262 | 69 | 328 | 5.68e-57 | 185 |
| MS.gene002195.t1 | AT1G34510 | 41.199 | 267 | 136 | 7 | 1 | 262 | 59 | 309 | 6.65e-57 | 184 |
| MS.gene002195.t1 | AT3G49960 | 38.889 | 270 | 153 | 5 | 1 | 262 | 64 | 329 | 1.90e-55 | 181 |
| MS.gene002195.t1 | AT5G47000 | 41.852 | 270 | 140 | 7 | 1 | 262 | 70 | 330 | 2.72e-55 | 181 |
| MS.gene002195.t1 | AT2G22420 | 38.346 | 266 | 152 | 6 | 2 | 262 | 61 | 319 | 2.98e-54 | 178 |
| MS.gene002195.t1 | AT4G37530 | 42.396 | 217 | 117 | 4 | 1 | 209 | 64 | 280 | 1.90e-50 | 167 |
| MS.gene002195.t1 | AT2G35380 | 41.935 | 248 | 134 | 5 | 22 | 262 | 3 | 247 | 1.93e-49 | 163 |
| MS.gene002195.t1 | AT1G24110 | 37.778 | 270 | 154 | 7 | 1 | 262 | 59 | 322 | 6.77e-48 | 162 |
| MS.gene002195.t1 | AT4G25980 | 55.118 | 127 | 56 | 1 | 1 | 126 | 108 | 234 | 1.63e-46 | 157 |
| MS.gene002195.t1 | AT3G17070 | 37.407 | 270 | 148 | 7 | 1 | 258 | 75 | 335 | 2.31e-46 | 158 |
| MS.gene002195.t1 | AT4G21960 | 34.831 | 267 | 158 | 5 | 3 | 262 | 70 | 327 | 1.21e-44 | 153 |
| MS.gene002195.t1 | AT3G17070 | 36.604 | 265 | 146 | 8 | 6 | 258 | 18 | 272 | 8.49e-42 | 144 |
| MS.gene002195.t1 | AT2G37130 | 33.955 | 268 | 160 | 6 | 3 | 262 | 38 | 296 | 6.75e-41 | 142 |
| MS.gene002195.t1 | AT2G37130 | 33.955 | 268 | 160 | 6 | 3 | 262 | 69 | 327 | 1.14e-40 | 143 |
| MS.gene002195.t1 | AT2G24800 | 50.340 | 147 | 67 | 2 | 1 | 146 | 68 | 209 | 2.12e-35 | 127 |
| MS.gene002195.t1 | AT3G42570 | 37.143 | 105 | 64 | 2 | 22 | 124 | 43 | 147 | 2.54e-13 | 66.2 |
Find 54 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAGATTTAATGTTGAATT+TGG | 0.130411 | 2.2:-71520219 | MS.gene002195:CDS |
| CAAGATCTTGTCACCTTAGA+TGG | 0.291641 | 2.2:-71520645 | MS.gene002195:intron |
| CTTAGTTGGCAAGTTCCTAC+TGG | 0.311787 | 2.2:-71520777 | MS.gene002195:CDS |
| TGCTCGTGATTCCGTTGTTC+TGG | 0.344793 | 2.2:-71521048 | MS.gene002195:intron |
| TCTGTTCTCATTGCCGATCC+TGG | 0.352719 | 2.2:-71521194 | MS.gene002195:CDS |
| AAACCTCTTAAACCAAGGTT+TGG | 0.364260 | 2.2:+71521152 | None:intergenic |
| AACAGAATTGCATTGGATAC+TGG | 0.369034 | 2.2:-71520384 | MS.gene002195:CDS |
| TTTAGATCACTAACCATCTA+AGG | 0.370097 | 2.2:+71520632 | None:intergenic |
| CAAAGATACTTGGGTATAAG+AGG | 0.397014 | 2.2:-71520252 | MS.gene002195:CDS |
| TTTCCAAACCTTGGTTTAAG+AGG | 0.398806 | 2.2:-71521155 | MS.gene002195:CDS |
| TTGGGTATAAGAGGGTTACT+TGG | 0.408586 | 2.2:-71520243 | MS.gene002195:CDS |
| TTGAGAAACTTCACTACAAA+TGG | 0.433202 | 2.2:-71520483 | MS.gene002195:CDS |
| GACATTTGTACAAAGATACT+TGG | 0.434727 | 2.2:-71520262 | MS.gene002195:CDS |
| AAACAAAAGTTTGCAGCAAA+AGG | 0.437277 | 2.2:-71520678 | MS.gene002195:CDS |
| AAACTCGAGGCTGCATGTCC+TGG | 0.463842 | 2.2:-71521104 | MS.gene002195:CDS |
| TGTAGAGTGGCGGTCTTAGT+TGG | 0.465158 | 2.2:-71520791 | MS.gene002195:intron |
| ATCATAGGTGGACATACAAT+TGG | 0.466050 | 2.2:-71520537 | MS.gene002195:intron |
| TGTTGAATTTGGAAAATCAA+TGG | 0.474476 | 2.2:-71520208 | MS.gene002195:CDS |
| TGCAATTGTGAAAGAAATGA+AGG | 0.476907 | 2.2:+71520438 | None:intergenic |
| TCTTTGTACAAATGTCTTTG+TGG | 0.483172 | 2.2:+71520269 | None:intergenic |
| TGACAAGATCTTGAGTGTTA+AGG | 0.493018 | 2.2:+71520655 | None:intergenic |
| AGAAATGAAGGGTCTATTGA+AGG | 0.493413 | 2.2:+71520450 | None:intergenic |
| AATGCTGTTCTCTCAGTGCC+AGG | 0.503709 | 2.2:+71521176 | None:intergenic |
| CTTCAAAACCTCTTAAACCA+AGG | 0.505092 | 2.2:+71521147 | None:intergenic |
| GGAGTGAAGACCGGTGTTGA+TGG | 0.506024 | 2.2:-71520168 | MS.gene002195:CDS |
| TGCTACAAACAGAATTGCAT+TGG | 0.519842 | 2.2:-71520391 | MS.gene002195:CDS |
| TACTATGCTAATCTGAGAAA+CGG | 0.520441 | 2.2:-71520336 | MS.gene002195:CDS |
| TTCAATCTGATCAAGAATTG+TGG | 0.520846 | 2.2:-71520302 | MS.gene002195:CDS |
| AGAACAGCATTTCCAAACCT+TGG | 0.521564 | 2.2:-71521164 | MS.gene002195:CDS |
| CAGAGACGGACGCGTGTCAC+AGG | 0.525113 | 2.2:-71520751 | MS.gene002195:CDS |
| AACGGAATCACGAGCAGCAA+GGG | 0.540446 | 2.2:+71521055 | None:intergenic |
| AGCAACATTGGAGTGAAGAC+CGG | 0.541360 | 2.2:-71520177 | MS.gene002195:CDS |
| GAACAGAAGCGTCACAACCT+TGG | 0.542109 | 2.2:+71521210 | None:intergenic |
| TTAGTTGGCAAGTTCCTACT+GGG | 0.543556 | 2.2:-71520776 | MS.gene002195:CDS |
| TCAACAGAATCGCTAGGAGC+AGG | 0.544138 | 2.2:+71520708 | None:intergenic |
| ATGGTGAAGATGAGCAACAT+TGG | 0.545138 | 2.2:-71520189 | MS.gene002195:CDS |
| GTTCCTACTGGGCGCAGAGA+CGG | 0.561016 | 2.2:-71520765 | MS.gene002195:CDS |
| GAAATGAAGGGTCTATTGAA+GGG | 0.566091 | 2.2:+71520451 | None:intergenic |
| AATCACGAGCAGCAAGGGCA+AGG | 0.566827 | 2.2:+71521060 | None:intergenic |
| CGTCCGTCTCTGCGCCCAGT+AGG | 0.568492 | 2.2:+71520762 | None:intergenic |
| GCGAATTTCACCATCAACAC+CGG | 0.575379 | 2.2:+71520158 | None:intergenic |
| CAACGGAATCACGAGCAGCA+AGG | 0.592899 | 2.2:+71521054 | None:intergenic |
| GCAATTGTGAAAGAAATGAA+GGG | 0.600717 | 2.2:+71520439 | None:intergenic |
| ACATTTGTACAAAGATACTT+GGG | 0.620694 | 2.2:-71520261 | MS.gene002195:CDS |
| ATGTATGCATTGTAGAGTGG+CGG | 0.620943 | 2.2:-71520801 | MS.gene002195:intron |
| TCCGCACAAGAGACAACACC+AGG | 0.625132 | 2.2:+71521086 | None:intergenic |
| TGGACATCAACAGAATCGCT+AGG | 0.625946 | 2.2:+71520702 | None:intergenic |
| TCCTGGTGTTGTCTCTTGTG+CGG | 0.627323 | 2.2:-71521087 | MS.gene002195:CDS |
| TGTTCTCTCAGTGCCAGGAT+CGG | 0.639635 | 2.2:+71521181 | None:intergenic |
| GCTAATCTGAGAAACGGACG+CGG | 0.641496 | 2.2:-71520330 | MS.gene002195:CDS |
| AAAGATACTTGGGTATAAGA+GGG | 0.651176 | 2.2:-71520251 | MS.gene002195:CDS |
| TTAGATAATTACCAGAACAA+CGG | 0.669992 | 2.2:+71521037 | None:intergenic |
| TGATGCTAAGACAAAACTCG+AGG | 0.709058 | 2.2:-71521117 | MS.gene002195:CDS |
| ACACTATGCCCTCAAAACAG+TGG | 0.709508 | 2.2:-71520414 | MS.gene002195:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATAAATTTTATGTTCA+TGG | - | chr2.2:71520419-71520438 | MS.gene002195:CDS | 10.0% |
| !! | ATATTCAATGAATATATCAT+AGG | - | chr2.2:71520815-71520834 | MS.gene002195:intron | 15.0% |
| !! | TTAAGATTTAATGTTGAATT+TGG | - | chr2.2:71521148-71521167 | MS.gene002195:CDS | 15.0% |
| !!! | ATATTGATCTATAATTTTGA+TGG | + | chr2.2:71520471-71520490 | None:intergenic | 15.0% |
| !! | AATGCATACATAAATCAATT+AGG | + | chr2.2:71520557-71520576 | None:intergenic | 20.0% |
| !! | TATTGTACAAATGATAGTAA+AGG | - | chr2.2:71520363-71520382 | MS.gene002195:CDS | 20.0% |
| ! | ACATTTGTACAAAGATACTT+GGG | - | chr2.2:71521106-71521125 | MS.gene002195:CDS | 25.0% |
| ! | TGTTGAATTTGGAAAATCAA+TGG | - | chr2.2:71521159-71521178 | MS.gene002195:CDS | 25.0% |
| ! | TTAGATAATTACCAGAACAA+CGG | + | chr2.2:71520333-71520352 | None:intergenic | 25.0% |
| ! | TTCAATGAATATATCATAGG+TGG | - | chr2.2:71520818-71520837 | MS.gene002195:intron | 25.0% |
| !! | TTCAATATGTAATTCTAGAG+TGG | + | chr2.2:71520780-71520799 | None:intergenic | 25.0% |
| !!! | GTTCATAATTTGTTGAAATG+TGG | - | chr2.2:71520530-71520549 | MS.gene002195:CDS | 25.0% |
| AAACAAAAGTTTGCAGCAAA+AGG | - | chr2.2:71520689-71520708 | MS.gene002195:CDS | 30.0% | |
| AAAGATACTTGGGTATAAGA+GGG | - | chr2.2:71521116-71521135 | MS.gene002195:CDS | 30.0% | |
| GACATTTGTACAAAGATACT+TGG | - | chr2.2:71521105-71521124 | MS.gene002195:CDS | 30.0% | |
| GCAATTGTGAAAGAAATGAA+GGG | + | chr2.2:71520931-71520950 | None:intergenic | 30.0% | |
| TACTATGCTAATCTGAGAAA+CGG | - | chr2.2:71521031-71521050 | MS.gene002195:intron | 30.0% | |
| TCTTTGTACAAATGTCTTTG+TGG | + | chr2.2:71521101-71521120 | None:intergenic | 30.0% | |
| TGCAATTGTGAAAGAAATGA+AGG | + | chr2.2:71520932-71520951 | None:intergenic | 30.0% | |
| TTCAATCTGATCAAGAATTG+TGG | - | chr2.2:71521065-71521084 | MS.gene002195:CDS | 30.0% | |
| TTGAGAAACTTCACTACAAA+TGG | - | chr2.2:71520884-71520903 | MS.gene002195:intron | 30.0% | |
| TTTAGATCACTAACCATCTA+AGG | + | chr2.2:71520738-71520757 | None:intergenic | 30.0% | |
| TTTATGTATGCATTGTAGAG+TGG | - | chr2.2:71520563-71520582 | MS.gene002195:intron | 30.0% | |
| !! | TTTCATGATTGTTTTGTCCA+AGG | - | chr2.2:71520140-71520159 | MS.gene002195:CDS | 30.0% |
| AAACCTCTTAAACCAAGGTT+TGG | + | chr2.2:71520218-71520237 | None:intergenic | 35.0% | |
| AACAGAATTGCATTGGATAC+TGG | - | chr2.2:71520983-71521002 | MS.gene002195:intron | 35.0% | |
| AGAAATGAAGGGTCTATTGA+AGG | + | chr2.2:71520920-71520939 | None:intergenic | 35.0% | |
| ATCATAGGTGGACATACAAT+TGG | - | chr2.2:71520830-71520849 | MS.gene002195:intron | 35.0% | |
| CAAAGATACTTGGGTATAAG+AGG | - | chr2.2:71521115-71521134 | MS.gene002195:CDS | 35.0% | |
| CTTCAAAACCTCTTAAACCA+AGG | + | chr2.2:71520223-71520242 | None:intergenic | 35.0% | |
| GAAATGAAGGGTCTATTGAA+GGG | + | chr2.2:71520919-71520938 | None:intergenic | 35.0% | |
| TGACAAGATCTTGAGTGTTA+AGG | + | chr2.2:71520715-71520734 | None:intergenic | 35.0% | |
| TGCTACAAACAGAATTGCAT+TGG | - | chr2.2:71520976-71520995 | MS.gene002195:intron | 35.0% | |
| TTTCCAAACCTTGGTTTAAG+AGG | - | chr2.2:71520212-71520231 | MS.gene002195:CDS | 35.0% | |
| !! | TTGCTGCAAACTTTTGTTTC+TGG | + | chr2.2:71520688-71520707 | None:intergenic | 35.0% |
| AGAACAGCATTTCCAAACCT+TGG | - | chr2.2:71520203-71520222 | MS.gene002195:CDS | 40.0% | |
| ATGGTGAAGATGAGCAACAT+TGG | - | chr2.2:71521178-71521197 | MS.gene002195:CDS | 40.0% | |
| ATGTATGCATTGTAGAGTGG+CGG | - | chr2.2:71520566-71520585 | MS.gene002195:intron | 40.0% | |
| CAAGATCTTGTCACCTTAGA+TGG | - | chr2.2:71520722-71520741 | MS.gene002195:CDS | 40.0% | |
| TGATGCTAAGACAAAACTCG+AGG | - | chr2.2:71520250-71520269 | MS.gene002195:CDS | 40.0% | |
| TTAGTTGGCAAGTTCCTACT+GGG | - | chr2.2:71520591-71520610 | MS.gene002195:intron | 40.0% | |
| TTGGGTATAAGAGGGTTACT+TGG | - | chr2.2:71521124-71521143 | MS.gene002195:CDS | 40.0% | |
| ! | TTTGTAGCACCACTGTTTTG+AGG | + | chr2.2:71520965-71520984 | None:intergenic | 40.0% |
| !! | TTGTAGCACCACTGTTTTGA+GGG | + | chr2.2:71520964-71520983 | None:intergenic | 40.0% |
| ACACTATGCCCTCAAAACAG+TGG | - | chr2.2:71520953-71520972 | MS.gene002195:intron | 45.0% | |
| AGCAACATTGGAGTGAAGAC+CGG | - | chr2.2:71521190-71521209 | MS.gene002195:CDS | 45.0% | |
| CTTAGTTGGCAAGTTCCTAC+TGG | - | chr2.2:71520590-71520609 | MS.gene002195:intron | 45.0% | |
| GCGAATTTCACCATCAACAC+CGG | + | chr2.2:71521212-71521231 | None:intergenic | 45.0% | |
| TGGACATCAACAGAATCGCT+AGG | + | chr2.2:71520668-71520687 | None:intergenic | 45.0% | |
| AACGGAATCACGAGCAGCAA+GGG | + | chr2.2:71520315-71520334 | None:intergenic | 50.0% | |
| AATGCTGTTCTCTCAGTGCC+AGG | + | chr2.2:71520194-71520213 | None:intergenic | 50.0% | |
| GCTAATCTGAGAAACGGACG+CGG | - | chr2.2:71521037-71521056 | MS.gene002195:intron | 50.0% | |
| TCAACAGAATCGCTAGGAGC+AGG | + | chr2.2:71520662-71520681 | None:intergenic | 50.0% | |
| TCTGTTCTCATTGCCGATCC+TGG | - | chr2.2:71520173-71520192 | MS.gene002195:CDS | 50.0% | |
| TGCTCGTGATTCCGTTGTTC+TGG | - | chr2.2:71520319-71520338 | MS.gene002195:CDS | 50.0% | |
| TGTAGAGTGGCGGTCTTAGT+TGG | - | chr2.2:71520576-71520595 | MS.gene002195:intron | 50.0% | |
| TGTTCTCTCAGTGCCAGGAT+CGG | + | chr2.2:71520189-71520208 | None:intergenic | 50.0% | |
| !! | GAACAGAAGCGTCACAACCT+TGG | + | chr2.2:71520160-71520179 | None:intergenic | 50.0% |
| !! | TCCTGGTGTTGTCTCTTGTG+CGG | - | chr2.2:71520280-71520299 | MS.gene002195:CDS | 50.0% |
| AAACTCGAGGCTGCATGTCC+TGG | - | chr2.2:71520263-71520282 | MS.gene002195:CDS | 55.0% | |
| AATCACGAGCAGCAAGGGCA+AGG | + | chr2.2:71520310-71520329 | None:intergenic | 55.0% | |
| CAACGGAATCACGAGCAGCA+AGG | + | chr2.2:71520316-71520335 | None:intergenic | 55.0% | |
| TCCGCACAAGAGACAACACC+AGG | + | chr2.2:71520284-71520303 | None:intergenic | 55.0% | |
| ! | GGAGTGAAGACCGGTGTTGA+TGG | - | chr2.2:71521199-71521218 | MS.gene002195:CDS | 55.0% |
| GTTCCTACTGGGCGCAGAGA+CGG | - | chr2.2:71520602-71520621 | MS.gene002195:intron | 60.0% | |
| CAGAGACGGACGCGTGTCAC+AGG | - | chr2.2:71520616-71520635 | MS.gene002195:intron | 65.0% | |
| CGTCCGTCTCTGCGCCCAGT+AGG | + | chr2.2:71520608-71520627 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 71520134 | 71521255 | 71520134 | ID=MS.gene002195 |
| chr2.2 | mRNA | 71520134 | 71521255 | 71520134 | ID=MS.gene002195.t1;Parent=MS.gene002195 |
| chr2.2 | exon | 71521049 | 71521255 | 71521049 | ID=MS.gene002195.t1.exon1;Parent=MS.gene002195.t1 |
| chr2.2 | CDS | 71521049 | 71521255 | 71521049 | ID=cds.MS.gene002195.t1;Parent=MS.gene002195.t1 |
| chr2.2 | exon | 71520646 | 71520808 | 71520646 | ID=MS.gene002195.t1.exon2;Parent=MS.gene002195.t1 |
| chr2.2 | CDS | 71520646 | 71520808 | 71520646 | ID=cds.MS.gene002195.t1;Parent=MS.gene002195.t1 |
| chr2.2 | exon | 71520134 | 71520552 | 71520134 | ID=MS.gene002195.t1.exon3;Parent=MS.gene002195.t1 |
| chr2.2 | CDS | 71520134 | 71520552 | 71520134 | ID=cds.MS.gene002195.t1;Parent=MS.gene002195.t1 |
| Gene Sequence |
| Protein sequence |
