Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025145.t1 | ABN09112.1 | 96.3 | 298 | 11 | 0 | 2 | 299 | 62 | 359 | 1.00E-161 | 579.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025145.t1 | Q42517 | 63.1 | 295 | 104 | 4 | 4 | 298 | 38 | 327 | 1.0e-98 | 361.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025145.t1 | G7IQ75 | 96.3 | 298 | 11 | 0 | 2 | 299 | 35 | 332 | 7.3e-162 | 579.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene52672 | MS.gene025145 | PPI |
MS.gene025145 | MS.gene010390 | PPI |
MS.gene37256 | MS.gene025145 | PPI |
MS.gene025145 | MS.gene54705 | PPI |
MS.gene055984 | MS.gene025145 | PPI |
MS.gene025145 | MS.gene002194 | PPI |
MS.gene025145 | MS.gene071927 | PPI |
MS.gene025145 | MS.gene041122 | PPI |
MS.gene01164 | MS.gene025145 | PPI |
MS.gene025145 | MS.gene047665 | PPI |
MS.gene025145 | MS.gene57129 | PPI |
MS.gene025145 | MS.gene034512 | PPI |
MS.gene025145 | MS.gene04636 | PPI |
MS.gene025145 | MS.gene018002 | PPI |
MS.gene025145 | MS.gene71395 | PPI |
MS.gene40613 | MS.gene025145 | PPI |
MS.gene025145 | MS.gene62417 | PPI |
MS.gene036786 | MS.gene025145 | PPI |
MS.gene025145 | MS.gene047667 | PPI |
MS.gene025145 | MS.gene61508 | PPI |
MS.gene025145 | MS.gene041124 | PPI |
MS.gene025145 | MS.gene71393 | PPI |
MS.gene025145 | MS.gene002195 | PPI |
MS.gene025145 | MS.gene010392 | PPI |
MS.gene025145 | MS.gene047065 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025145.t1 | MTR_2g040000 | 96.644 | 298 | 10 | 0 | 2 | 299 | 35 | 332 | 0.0 | 594 |
MS.gene025145.t1 | MTR_4g125940 | 71.477 | 298 | 84 | 1 | 2 | 299 | 34 | 330 | 2.23e-155 | 437 |
MS.gene025145.t1 | MTR_4g125940 | 73.551 | 276 | 72 | 1 | 24 | 299 | 1 | 275 | 6.18e-147 | 414 |
MS.gene025145.t1 | MTR_1g054205 | 56.711 | 298 | 123 | 2 | 4 | 298 | 32 | 326 | 4.05e-118 | 342 |
MS.gene025145.t1 | MTR_7g093370 | 56.711 | 298 | 123 | 2 | 4 | 298 | 77 | 371 | 1.77e-117 | 343 |
MS.gene025145.t1 | MTR_8g076820 | 53.356 | 298 | 133 | 2 | 4 | 299 | 38 | 331 | 6.08e-106 | 312 |
MS.gene025145.t1 | MTR_5g021060 | 52.862 | 297 | 134 | 2 | 4 | 298 | 38 | 330 | 6.69e-105 | 309 |
MS.gene025145.t1 | MTR_2g029815 | 51.007 | 298 | 141 | 2 | 4 | 299 | 37 | 331 | 1.03e-102 | 304 |
MS.gene025145.t1 | MTR_2g084110 | 52.525 | 297 | 127 | 4 | 4 | 298 | 33 | 317 | 2.46e-102 | 302 |
MS.gene025145.t1 | MTR_5g017860 | 51.678 | 298 | 135 | 4 | 4 | 298 | 35 | 326 | 4.52e-102 | 301 |
MS.gene025145.t1 | MTR_2g028980 | 52.862 | 297 | 135 | 2 | 4 | 298 | 37 | 330 | 5.22e-102 | 303 |
MS.gene025145.t1 | MTR_5g083860 | 53.000 | 300 | 125 | 5 | 3 | 298 | 38 | 325 | 8.33e-102 | 301 |
MS.gene025145.t1 | MTR_2g029800 | 51.333 | 300 | 141 | 2 | 2 | 299 | 35 | 331 | 2.70e-101 | 301 |
MS.gene025145.t1 | MTR_5g017850 | 51.342 | 298 | 136 | 4 | 4 | 298 | 35 | 326 | 5.08e-101 | 299 |
MS.gene025145.t1 | MTR_3g072190 | 52.013 | 298 | 129 | 3 | 3 | 298 | 33 | 318 | 2.47e-100 | 297 |
MS.gene025145.t1 | MTR_2g084010 | 51.515 | 297 | 131 | 3 | 4 | 298 | 33 | 318 | 2.55e-100 | 297 |
MS.gene025145.t1 | MTR_3g094650 | 52.508 | 299 | 126 | 5 | 4 | 298 | 36 | 322 | 6.29e-100 | 296 |
MS.gene025145.t1 | MTR_2g084080 | 50.671 | 298 | 133 | 3 | 3 | 298 | 32 | 317 | 9.53e-100 | 295 |
MS.gene025145.t1 | MTR_2g029820 | 49.000 | 300 | 148 | 2 | 2 | 299 | 35 | 331 | 4.64e-99 | 295 |
MS.gene025145.t1 | MTR_2g084020 | 51.007 | 298 | 133 | 3 | 3 | 298 | 32 | 318 | 8.06e-99 | 293 |
MS.gene025145.t1 | MTR_2g029830 | 50.000 | 298 | 144 | 2 | 4 | 299 | 36 | 330 | 1.57e-98 | 294 |
MS.gene025145.t1 | MTR_3g466200 | 52.333 | 300 | 124 | 6 | 5 | 298 | 34 | 320 | 2.29e-98 | 292 |
MS.gene025145.t1 | MTR_2g029560 | 50.000 | 298 | 144 | 2 | 4 | 299 | 32 | 326 | 5.21e-97 | 290 |
MS.gene025145.t1 | MTR_5g074970 | 52.667 | 300 | 124 | 5 | 5 | 298 | 39 | 326 | 6.07e-97 | 289 |
MS.gene025145.t1 | MTR_7g072510 | 49.329 | 298 | 137 | 3 | 3 | 298 | 27 | 312 | 7.49e-97 | 288 |
MS.gene025145.t1 | MTR_2g029730 | 50.168 | 297 | 143 | 2 | 4 | 298 | 33 | 326 | 1.94e-96 | 288 |
MS.gene025145.t1 | MTR_2g029860 | 48.993 | 298 | 147 | 2 | 3 | 298 | 36 | 330 | 1.03e-95 | 286 |
MS.gene025145.t1 | MTR_3g094670 | 53.667 | 300 | 123 | 5 | 3 | 298 | 35 | 322 | 6.28e-95 | 283 |
MS.gene025145.t1 | MTR_2g029850 | 49.164 | 299 | 147 | 2 | 2 | 298 | 35 | 330 | 3.30e-94 | 283 |
MS.gene025145.t1 | MTR_4g122640 | 48.822 | 297 | 144 | 3 | 4 | 298 | 46 | 336 | 5.24e-94 | 281 |
MS.gene025145.t1 | MTR_4g083710 | 48.505 | 301 | 140 | 4 | 3 | 298 | 34 | 324 | 8.73e-94 | 280 |
MS.gene025145.t1 | MTR_5g014100 | 50.987 | 304 | 138 | 5 | 2 | 298 | 32 | 331 | 8.97e-94 | 281 |
MS.gene025145.t1 | MTR_3g094630 | 54.181 | 299 | 121 | 5 | 4 | 298 | 36 | 322 | 9.13e-94 | 280 |
MS.gene025145.t1 | MTR_4g029170 | 49.498 | 299 | 135 | 5 | 4 | 298 | 35 | 321 | 1.74e-93 | 280 |
MS.gene025145.t1 | MTR_7g072480 | 50.168 | 297 | 134 | 4 | 4 | 298 | 32 | 316 | 1.84e-93 | 280 |
MS.gene025145.t1 | MTR_2g029750 | 49.495 | 297 | 145 | 2 | 4 | 298 | 37 | 330 | 3.60e-93 | 280 |
MS.gene025145.t1 | MTR_2g084000 | 48.148 | 297 | 141 | 3 | 4 | 298 | 34 | 319 | 1.17e-92 | 278 |
MS.gene025145.t1 | MTR_4g029180 | 49.498 | 299 | 135 | 5 | 4 | 298 | 35 | 321 | 1.48e-92 | 277 |
MS.gene025145.t1 | MTR_2g029740 | 48.485 | 297 | 148 | 2 | 4 | 298 | 37 | 330 | 9.99e-92 | 276 |
MS.gene025145.t1 | MTR_2g084090 | 48.322 | 298 | 139 | 4 | 4 | 298 | 33 | 318 | 2.25e-91 | 274 |
MS.gene025145.t1 | MTR_4g029200 | 47.315 | 298 | 143 | 3 | 3 | 298 | 53 | 338 | 4.06e-91 | 274 |
MS.gene025145.t1 | MTR_4g074995 | 48.185 | 303 | 123 | 6 | 4 | 298 | 32 | 308 | 3.73e-89 | 268 |
MS.gene025145.t1 | MTR_4g030890 | 47.811 | 297 | 145 | 4 | 4 | 298 | 108 | 396 | 4.30e-89 | 271 |
MS.gene025145.t1 | MTR_4g031140 | 46.309 | 298 | 150 | 4 | 4 | 299 | 36 | 325 | 5.98e-89 | 269 |
MS.gene025145.t1 | MTR_5g074860 | 48.993 | 298 | 136 | 6 | 5 | 297 | 38 | 324 | 7.70e-88 | 265 |
MS.gene025145.t1 | MTR_5g074760 | 49.164 | 299 | 136 | 7 | 5 | 298 | 34 | 321 | 7.98e-88 | 265 |
MS.gene025145.t1 | MTR_2g029910 | 45.847 | 301 | 157 | 3 | 2 | 299 | 36 | 333 | 2.46e-87 | 265 |
MS.gene025145.t1 | MTR_5g049280 | 46.179 | 301 | 156 | 4 | 3 | 299 | 40 | 338 | 5.96e-87 | 264 |
MS.gene025145.t1 | MTR_3g466180 | 49.664 | 298 | 136 | 3 | 3 | 298 | 38 | 323 | 7.16e-87 | 263 |
MS.gene025145.t1 | MTR_1g022970 | 47.811 | 297 | 150 | 2 | 4 | 298 | 54 | 347 | 1.74e-86 | 263 |
MS.gene025145.t1 | MTR_5g074740 | 48.829 | 299 | 137 | 7 | 5 | 298 | 34 | 321 | 1.12e-85 | 260 |
MS.gene025145.t1 | MTR_5g074710 | 48.161 | 299 | 139 | 7 | 5 | 298 | 34 | 321 | 1.89e-85 | 259 |
MS.gene025145.t1 | MTR_4g046713 | 46.309 | 298 | 151 | 5 | 4 | 298 | 35 | 326 | 1.76e-84 | 257 |
MS.gene025145.t1 | MTR_2g088770 | 46.980 | 298 | 149 | 5 | 4 | 298 | 34 | 325 | 9.57e-84 | 255 |
MS.gene025145.t1 | MTR_2g008710 | 46.333 | 300 | 149 | 5 | 3 | 298 | 34 | 325 | 1.86e-83 | 254 |
MS.gene025145.t1 | MTR_2g029830 | 49.615 | 260 | 126 | 2 | 42 | 299 | 6 | 262 | 1.94e-83 | 253 |
MS.gene025145.t1 | MTR_4g114210 | 46.333 | 300 | 148 | 5 | 4 | 298 | 29 | 320 | 1.46e-82 | 252 |
MS.gene025145.t1 | MTR_4g029190 | 44.595 | 296 | 152 | 4 | 5 | 298 | 55 | 340 | 2.34e-82 | 252 |
MS.gene025145.t1 | MTR_4g074990 | 44.518 | 301 | 136 | 4 | 3 | 298 | 31 | 305 | 4.92e-82 | 250 |
MS.gene025145.t1 | MTR_7g026990 | 45.302 | 298 | 148 | 5 | 4 | 299 | 39 | 323 | 3.44e-80 | 246 |
MS.gene025145.t1 | MTR_1g115900 | 45.847 | 301 | 145 | 7 | 4 | 299 | 35 | 322 | 7.66e-80 | 245 |
MS.gene025145.t1 | MTR_3g467600 | 45.667 | 300 | 148 | 6 | 4 | 298 | 35 | 324 | 2.37e-79 | 244 |
MS.gene025145.t1 | MTR_3g072190 | 49.618 | 262 | 118 | 3 | 39 | 298 | 2 | 251 | 3.80e-79 | 241 |
MS.gene025145.t1 | MTR_5g022870 | 45.302 | 298 | 148 | 8 | 4 | 298 | 31 | 316 | 8.37e-79 | 242 |
MS.gene025145.t1 | MTR_1g101830 | 43.624 | 298 | 155 | 6 | 4 | 298 | 35 | 322 | 4.42e-77 | 238 |
MS.gene025145.t1 | MTR_0155s0040 | 44.781 | 297 | 146 | 8 | 4 | 298 | 35 | 315 | 7.55e-77 | 237 |
MS.gene025145.t1 | MTR_4g074980 | 44.631 | 298 | 128 | 5 | 3 | 298 | 32 | 294 | 2.01e-76 | 235 |
MS.gene025145.t1 | MTR_1g086320 | 44.554 | 303 | 157 | 5 | 2 | 298 | 36 | 333 | 1.09e-74 | 232 |
MS.gene025145.t1 | MTR_3g092990 | 42.808 | 292 | 159 | 3 | 11 | 299 | 41 | 327 | 3.65e-74 | 231 |
MS.gene025145.t1 | MTR_8g075100 | 43.624 | 298 | 153 | 8 | 4 | 298 | 34 | 319 | 6.39e-74 | 229 |
MS.gene025145.t1 | MTR_7g107520 | 43.000 | 300 | 158 | 6 | 2 | 298 | 31 | 320 | 4.29e-73 | 228 |
MS.gene025145.t1 | MTR_1g086490 | 42.903 | 310 | 159 | 5 | 2 | 298 | 36 | 340 | 9.65e-72 | 225 |
MS.gene025145.t1 | MTR_1g090760 | 40.728 | 302 | 169 | 4 | 2 | 298 | 34 | 330 | 1.01e-70 | 222 |
MS.gene025145.t1 | MTR_7g029030 | 41.275 | 298 | 164 | 5 | 3 | 298 | 32 | 320 | 1.76e-70 | 221 |
MS.gene025145.t1 | MTR_2g008160 | 43.333 | 300 | 157 | 7 | 4 | 298 | 32 | 323 | 1.92e-70 | 221 |
MS.gene025145.t1 | MTR_4g133800 | 41.000 | 300 | 161 | 7 | 2 | 298 | 47 | 333 | 3.94e-70 | 221 |
MS.gene025145.t1 | MTR_2g067440 | 37.994 | 329 | 168 | 6 | 2 | 299 | 66 | 389 | 8.73e-70 | 221 |
MS.gene025145.t1 | MTR_1g025980 | 42.761 | 297 | 156 | 7 | 4 | 297 | 32 | 317 | 1.64e-69 | 218 |
MS.gene025145.t1 | MTR_1g077000 | 43.098 | 297 | 151 | 8 | 4 | 298 | 47 | 327 | 2.00e-69 | 218 |
MS.gene025145.t1 | MTR_1g009750 | 39.203 | 301 | 174 | 3 | 2 | 298 | 33 | 328 | 2.45e-69 | 218 |
MS.gene025145.t1 | MTR_7g086820 | 39.057 | 297 | 169 | 5 | 3 | 298 | 27 | 312 | 2.72e-69 | 218 |
MS.gene025145.t1 | MTR_6g043280 | 42.000 | 300 | 155 | 6 | 4 | 299 | 49 | 333 | 4.21e-69 | 218 |
MS.gene025145.t1 | MTR_4g074980 | 48.246 | 228 | 107 | 3 | 3 | 225 | 32 | 253 | 2.33e-68 | 213 |
MS.gene025145.t1 | MTR_5g016010 | 36.570 | 309 | 170 | 4 | 2 | 297 | 33 | 328 | 7.44e-68 | 214 |
MS.gene025145.t1 | MTR_1g038680 | 42.193 | 301 | 163 | 5 | 4 | 298 | 37 | 332 | 7.65e-68 | 214 |
MS.gene025145.t1 | MTR_4g127670 | 39.726 | 292 | 169 | 2 | 5 | 294 | 33 | 319 | 9.19e-68 | 214 |
MS.gene025145.t1 | MTR_2g078610 | 37.048 | 332 | 170 | 6 | 2 | 299 | 82 | 408 | 5.83e-67 | 214 |
MS.gene025145.t1 | MTR_2g437770 | 41.137 | 299 | 163 | 7 | 2 | 299 | 56 | 342 | 9.16e-67 | 212 |
MS.gene025145.t1 | MTR_5g074860 | 41.946 | 298 | 118 | 6 | 5 | 297 | 38 | 285 | 3.75e-66 | 209 |
MS.gene025145.t1 | MTR_6g043240 | 40.678 | 295 | 162 | 4 | 4 | 298 | 50 | 331 | 4.73e-66 | 211 |
MS.gene025145.t1 | MTR_6g027440 | 40.067 | 297 | 165 | 6 | 4 | 298 | 29 | 314 | 5.58e-66 | 209 |
MS.gene025145.t1 | MTR_7g086870 | 39.130 | 299 | 165 | 6 | 3 | 299 | 29 | 312 | 7.17e-66 | 209 |
MS.gene025145.t1 | MTR_2g077990 | 36.747 | 332 | 171 | 6 | 2 | 299 | 82 | 408 | 1.16e-65 | 211 |
MS.gene025145.t1 | MTR_2g099175 | 39.333 | 300 | 169 | 5 | 4 | 298 | 44 | 335 | 2.04e-65 | 208 |
MS.gene025145.t1 | MTR_2g008730 | 46.559 | 247 | 121 | 4 | 56 | 298 | 62 | 301 | 8.62e-65 | 206 |
MS.gene025145.t1 | MTR_8g062780 | 41.196 | 301 | 168 | 5 | 2 | 298 | 29 | 324 | 3.73e-64 | 205 |
MS.gene025145.t1 | MTR_4g087965 | 40.134 | 299 | 165 | 6 | 4 | 294 | 50 | 342 | 3.69e-63 | 203 |
MS.gene025145.t1 | MTR_4g095450 | 38.796 | 299 | 166 | 6 | 5 | 297 | 36 | 323 | 1.07e-62 | 201 |
MS.gene025145.t1 | MTR_3g092990 | 40.411 | 292 | 155 | 4 | 11 | 299 | 41 | 316 | 1.38e-62 | 201 |
MS.gene025145.t1 | MTR_2g078280 | 36.825 | 315 | 161 | 5 | 2 | 283 | 82 | 391 | 9.53e-62 | 201 |
MS.gene025145.t1 | MTR_1g009750 | 36.455 | 299 | 168 | 4 | 2 | 298 | 33 | 311 | 8.73e-59 | 191 |
MS.gene025145.t1 | MTR_2g067450 | 37.299 | 311 | 167 | 8 | 2 | 299 | 17 | 312 | 2.36e-57 | 187 |
MS.gene025145.t1 | MTR_2g008160 | 38.667 | 300 | 136 | 7 | 4 | 298 | 32 | 288 | 7.27e-57 | 185 |
MS.gene025145.t1 | MTR_6g043460 | 38.255 | 298 | 164 | 7 | 2 | 294 | 42 | 324 | 1.04e-56 | 186 |
MS.gene025145.t1 | MTR_0147s0010 | 35.759 | 316 | 166 | 5 | 2 | 297 | 83 | 381 | 2.54e-56 | 186 |
MS.gene025145.t1 | MTR_1g066710 | 35.667 | 300 | 179 | 6 | 4 | 299 | 35 | 324 | 5.63e-55 | 181 |
MS.gene025145.t1 | MTR_5g033470 | 35.294 | 306 | 178 | 8 | 4 | 298 | 81 | 377 | 2.41e-53 | 178 |
MS.gene025145.t1 | MTR_4g132490 | 34.000 | 300 | 188 | 5 | 2 | 298 | 35 | 327 | 1.01e-52 | 175 |
MS.gene025145.t1 | MTR_3g105790 | 36.000 | 300 | 177 | 6 | 4 | 298 | 33 | 322 | 1.24e-52 | 175 |
MS.gene025145.t1 | MTR_0286s0010 | 36.364 | 308 | 172 | 8 | 2 | 298 | 40 | 334 | 1.57e-52 | 175 |
MS.gene025145.t1 | MTR_6g008075 | 36.364 | 308 | 172 | 8 | 2 | 298 | 40 | 334 | 1.57e-52 | 175 |
MS.gene025145.t1 | MTR_4g132110 | 34.628 | 309 | 174 | 6 | 2 | 299 | 38 | 329 | 3.16e-52 | 174 |
MS.gene025145.t1 | MTR_5g074700 | 41.350 | 237 | 111 | 7 | 65 | 298 | 3 | 214 | 3.40e-52 | 171 |
MS.gene025145.t1 | MTR_1g066640 | 34.853 | 307 | 172 | 6 | 4 | 299 | 35 | 324 | 3.55e-52 | 174 |
MS.gene025145.t1 | MTR_1g066680 | 34.884 | 301 | 181 | 5 | 3 | 299 | 34 | 323 | 5.64e-51 | 171 |
MS.gene025145.t1 | MTR_4g132110 | 34.713 | 314 | 172 | 8 | 2 | 299 | 38 | 334 | 3.73e-50 | 169 |
MS.gene025145.t1 | MTR_1g066380 | 33.550 | 307 | 176 | 7 | 4 | 299 | 35 | 324 | 5.46e-50 | 168 |
MS.gene025145.t1 | MTR_3g072210 | 46.154 | 195 | 93 | 3 | 105 | 298 | 55 | 238 | 1.13e-47 | 160 |
MS.gene025145.t1 | MTR_2g008160 | 50.000 | 160 | 78 | 2 | 4 | 163 | 32 | 189 | 4.07e-46 | 154 |
MS.gene025145.t1 | MTR_2g029880 | 41.753 | 194 | 100 | 2 | 106 | 299 | 9 | 189 | 2.87e-43 | 147 |
MS.gene025145.t1 | MTR_1g066380 | 33.210 | 271 | 153 | 6 | 40 | 299 | 3 | 256 | 2.04e-41 | 144 |
MS.gene025145.t1 | MTR_3g105790 | 36.626 | 243 | 141 | 5 | 61 | 298 | 12 | 246 | 5.03e-40 | 140 |
MS.gene025145.t1 | MTR_7g072490 | 39.683 | 252 | 84 | 6 | 42 | 291 | 2 | 187 | 1.70e-38 | 135 |
MS.gene025145.t1 | MTR_3g072260 | 64.000 | 100 | 34 | 1 | 4 | 101 | 34 | 133 | 1.99e-37 | 130 |
MS.gene025145.t1 | MTR_2g077980 | 32.281 | 285 | 143 | 10 | 56 | 299 | 11 | 286 | 1.53e-32 | 122 |
MS.gene025145.t1 | MTR_2g078560 | 30.088 | 226 | 124 | 3 | 99 | 294 | 95 | 316 | 1.40e-31 | 120 |
MS.gene025145.t1 | MTR_3g462850 | 36.486 | 148 | 90 | 3 | 154 | 299 | 5 | 150 | 3.81e-22 | 90.5 |
MS.gene025145.t1 | MTR_4g031040 | 33.908 | 174 | 67 | 4 | 56 | 227 | 4 | 131 | 1.09e-21 | 89.0 |
MS.gene025145.t1 | MTR_5g058120 | 34.545 | 165 | 92 | 3 | 130 | 294 | 7 | 155 | 2.23e-21 | 91.3 |
MS.gene025145.t1 | MTR_4g114220 | 48.315 | 89 | 38 | 2 | 15 | 103 | 22 | 102 | 7.03e-20 | 84.3 |
MS.gene025145.t1 | MTR_7g086790 | 32.275 | 189 | 104 | 5 | 43 | 229 | 17 | 183 | 1.03e-18 | 82.8 |
MS.gene025145.t1 | MTR_6g048160 | 59.420 | 69 | 26 | 2 | 35 | 103 | 22 | 88 | 3.15e-18 | 78.2 |
MS.gene025145.t1 | MTR_1g098320 | 42.169 | 83 | 43 | 1 | 216 | 298 | 47 | 124 | 6.47e-15 | 70.9 |
MS.gene025145.t1 | MTR_5g074770 | 39.362 | 94 | 52 | 2 | 204 | 297 | 20 | 108 | 1.36e-14 | 68.9 |
MS.gene025145.t1 | MTR_1g089005 | 35.556 | 135 | 74 | 4 | 2 | 128 | 21 | 150 | 5.77e-14 | 68.6 |
MS.gene025145.t1 | MTR_7g107500 | 41.304 | 92 | 46 | 3 | 208 | 298 | 13 | 97 | 2.55e-13 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025145.t1 | AT5G19890 | 63.051 | 295 | 104 | 4 | 4 | 298 | 38 | 327 | 4.81e-130 | 373 |
MS.gene025145.t1 | AT5G06720 | 55.556 | 297 | 127 | 2 | 4 | 298 | 40 | 333 | 4.22e-114 | 333 |
MS.gene025145.t1 | AT5G06730 | 54.209 | 297 | 131 | 2 | 4 | 298 | 41 | 334 | 3.76e-112 | 328 |
MS.gene025145.t1 | AT4G36430 | 54.362 | 298 | 130 | 2 | 4 | 299 | 38 | 331 | 1.51e-111 | 326 |
MS.gene025145.t1 | AT2G18150 | 52.843 | 299 | 135 | 2 | 2 | 298 | 42 | 336 | 1.49e-108 | 318 |
MS.gene025145.t1 | AT2G38390 | 51.007 | 298 | 140 | 3 | 4 | 298 | 39 | 333 | 3.88e-105 | 310 |
MS.gene025145.t1 | AT2G18140 | 51.839 | 299 | 138 | 2 | 2 | 298 | 41 | 335 | 1.23e-104 | 309 |
MS.gene025145.t1 | AT5G66390 | 51.515 | 297 | 138 | 2 | 4 | 298 | 41 | 333 | 1.43e-103 | 306 |
MS.gene025145.t1 | AT5G05340 | 52.862 | 297 | 122 | 5 | 3 | 294 | 37 | 320 | 3.65e-102 | 302 |
MS.gene025145.t1 | AT2G38380 | 51.678 | 298 | 138 | 3 | 4 | 298 | 39 | 333 | 4.92e-102 | 302 |
MS.gene025145.t1 | AT3G50990 | 51.178 | 297 | 139 | 2 | 4 | 298 | 49 | 341 | 8.45e-101 | 299 |
MS.gene025145.t1 | AT1G49570 | 52.365 | 296 | 131 | 4 | 4 | 294 | 56 | 346 | 3.78e-100 | 298 |
MS.gene025145.t1 | AT3G32980 | 49.833 | 299 | 145 | 3 | 4 | 299 | 39 | 335 | 9.50e-98 | 291 |
MS.gene025145.t1 | AT4G16270 | 51.171 | 299 | 138 | 3 | 2 | 298 | 56 | 348 | 9.60e-96 | 286 |
MS.gene025145.t1 | AT4G08770 | 49.164 | 299 | 147 | 3 | 4 | 299 | 32 | 328 | 2.15e-95 | 285 |
MS.gene025145.t1 | AT1G44970 | 51.852 | 297 | 138 | 2 | 4 | 298 | 53 | 346 | 4.36e-95 | 285 |
MS.gene025145.t1 | AT5G19880 | 51.163 | 301 | 139 | 3 | 3 | 298 | 32 | 329 | 9.41e-94 | 281 |
MS.gene025145.t1 | AT4G08780 | 47.157 | 299 | 153 | 3 | 4 | 299 | 32 | 328 | 4.30e-92 | 277 |
MS.gene025145.t1 | AT3G49120 | 48.829 | 299 | 148 | 3 | 4 | 299 | 40 | 336 | 6.80e-92 | 277 |
MS.gene025145.t1 | AT3G49110 | 48.667 | 300 | 149 | 3 | 3 | 299 | 40 | 337 | 1.11e-91 | 276 |
MS.gene025145.t1 | AT5G58390 | 51.827 | 301 | 130 | 5 | 2 | 298 | 27 | 316 | 2.17e-90 | 271 |
MS.gene025145.t1 | AT5G58400 | 48.333 | 300 | 138 | 6 | 4 | 298 | 38 | 325 | 4.25e-88 | 266 |
MS.gene025145.t1 | AT1G14550 | 46.309 | 298 | 147 | 4 | 4 | 298 | 34 | 321 | 4.31e-88 | 266 |
MS.gene025145.t1 | AT2G35380 | 49.007 | 302 | 147 | 4 | 2 | 298 | 36 | 335 | 2.46e-87 | 265 |
MS.gene025145.t1 | AT1G68850 | 44.079 | 304 | 161 | 5 | 2 | 299 | 36 | 336 | 1.08e-86 | 263 |
MS.gene025145.t1 | AT5G64120 | 46.622 | 296 | 149 | 5 | 3 | 298 | 42 | 328 | 2.33e-86 | 262 |
MS.gene025145.t1 | AT2G22420 | 45.118 | 297 | 153 | 4 | 4 | 298 | 31 | 319 | 7.45e-86 | 261 |
MS.gene025145.t1 | AT2G41480 | 47.176 | 301 | 146 | 5 | 3 | 298 | 36 | 328 | 3.88e-84 | 256 |
MS.gene025145.t1 | AT4G11290 | 44.482 | 299 | 157 | 4 | 4 | 298 | 33 | 326 | 1.86e-82 | 252 |
MS.gene025145.t1 | AT5G39580 | 47.138 | 297 | 147 | 6 | 3 | 298 | 32 | 319 | 8.78e-82 | 250 |
MS.gene025145.t1 | AT1G14540 | 43.771 | 297 | 155 | 3 | 4 | 298 | 29 | 315 | 5.13e-81 | 248 |
MS.gene025145.t1 | AT5G15180 | 42.905 | 296 | 162 | 4 | 4 | 298 | 40 | 329 | 8.06e-81 | 248 |
MS.gene025145.t1 | AT3G01190 | 44.595 | 296 | 155 | 5 | 4 | 298 | 34 | 321 | 5.22e-79 | 243 |
MS.gene025145.t1 | AT1G05260 | 42.953 | 298 | 163 | 4 | 4 | 299 | 34 | 326 | 1.86e-76 | 236 |
MS.gene025145.t1 | AT5G17820 | 42.712 | 295 | 156 | 5 | 4 | 298 | 32 | 313 | 4.08e-76 | 235 |
MS.gene025145.t1 | AT1G05240 | 42.000 | 300 | 165 | 5 | 2 | 298 | 32 | 325 | 3.74e-75 | 233 |
MS.gene025145.t1 | AT1G05250 | 42.000 | 300 | 165 | 5 | 2 | 298 | 32 | 325 | 3.74e-75 | 233 |
MS.gene025145.t1 | AT5G17820 | 42.712 | 295 | 156 | 5 | 4 | 298 | 85 | 366 | 1.07e-74 | 233 |
MS.gene025145.t1 | AT3G21770 | 42.282 | 298 | 165 | 4 | 4 | 299 | 37 | 329 | 4.28e-74 | 231 |
MS.gene025145.t1 | AT5G64110 | 44.518 | 301 | 151 | 7 | 3 | 298 | 41 | 330 | 9.40e-74 | 229 |
MS.gene025145.t1 | AT3G03670 | 43.434 | 297 | 160 | 5 | 4 | 298 | 31 | 321 | 8.30e-73 | 227 |
MS.gene025145.t1 | AT4G25980 | 41.667 | 300 | 163 | 4 | 4 | 298 | 34 | 326 | 3.13e-72 | 226 |
MS.gene025145.t1 | AT5G51890 | 42.140 | 299 | 159 | 7 | 4 | 298 | 34 | 322 | 3.42e-72 | 225 |
MS.gene025145.t1 | AT1G77100 | 45.183 | 301 | 146 | 8 | 4 | 298 | 32 | 319 | 1.99e-71 | 223 |
MS.gene025145.t1 | AT4G37530 | 40.129 | 309 | 157 | 4 | 4 | 298 | 35 | 329 | 2.35e-71 | 223 |
MS.gene025145.t1 | AT5G42180 | 42.424 | 297 | 157 | 7 | 4 | 297 | 31 | 316 | 1.08e-70 | 221 |
MS.gene025145.t1 | AT5G14130 | 40.604 | 298 | 169 | 4 | 3 | 298 | 39 | 330 | 1.88e-70 | 221 |
MS.gene025145.t1 | AT1G71695 | 41.914 | 303 | 159 | 8 | 2 | 299 | 50 | 340 | 3.95e-70 | 221 |
MS.gene025145.t1 | AT5G14130 | 40.604 | 298 | 169 | 4 | 3 | 298 | 80 | 371 | 7.61e-70 | 221 |
MS.gene025145.t1 | AT4G37520 | 39.000 | 300 | 173 | 4 | 4 | 298 | 35 | 329 | 2.01e-68 | 216 |
MS.gene025145.t1 | AT4G33870 | 36.970 | 330 | 165 | 5 | 2 | 294 | 74 | 397 | 3.71e-68 | 218 |
MS.gene025145.t1 | AT2G18980 | 40.532 | 301 | 167 | 5 | 2 | 298 | 31 | 323 | 7.75e-68 | 214 |
MS.gene025145.t1 | AT2G35380 | 47.967 | 246 | 123 | 3 | 56 | 298 | 4 | 247 | 8.01e-68 | 212 |
MS.gene025145.t1 | AT4G33420 | 43.098 | 297 | 151 | 8 | 4 | 298 | 45 | 325 | 8.67e-68 | 214 |
MS.gene025145.t1 | AT5G24070 | 39.474 | 304 | 170 | 6 | 1 | 299 | 42 | 336 | 1.50e-67 | 214 |
MS.gene025145.t1 | AT4G30170 | 40.134 | 299 | 167 | 5 | 4 | 298 | 35 | 325 | 2.53e-67 | 213 |
MS.gene025145.t1 | AT4G33420 | 43.098 | 297 | 151 | 8 | 4 | 298 | 92 | 372 | 2.99e-67 | 214 |
MS.gene025145.t1 | AT5G64100 | 41.156 | 294 | 165 | 6 | 5 | 298 | 46 | 331 | 4.11e-67 | 213 |
MS.gene025145.t1 | AT2G43480 | 41.333 | 300 | 162 | 6 | 4 | 298 | 45 | 335 | 2.64e-66 | 211 |
MS.gene025145.t1 | AT4G37520 | 38.333 | 300 | 172 | 5 | 4 | 298 | 35 | 326 | 1.83e-65 | 208 |
MS.gene025145.t1 | AT4G17690 | 39.088 | 307 | 163 | 6 | 2 | 299 | 32 | 323 | 1.09e-64 | 206 |
MS.gene025145.t1 | AT4G37530 | 42.126 | 254 | 124 | 3 | 4 | 243 | 35 | 279 | 5.78e-62 | 198 |
MS.gene025145.t1 | AT2G34060 | 39.465 | 299 | 169 | 4 | 5 | 296 | 51 | 344 | 7.78e-62 | 199 |
MS.gene025145.t1 | AT3G49960 | 38.333 | 300 | 175 | 4 | 4 | 298 | 35 | 329 | 8.99e-62 | 199 |
MS.gene025145.t1 | AT5G67400 | 38.333 | 300 | 175 | 4 | 4 | 298 | 35 | 329 | 3.31e-61 | 197 |
MS.gene025145.t1 | AT2G24800 | 40.532 | 301 | 163 | 7 | 4 | 298 | 39 | 329 | 1.03e-60 | 196 |
MS.gene025145.t1 | AT5G47000 | 37.785 | 307 | 168 | 5 | 2 | 299 | 39 | 331 | 1.25e-60 | 196 |
MS.gene025145.t1 | AT5G40150 | 37.377 | 305 | 165 | 6 | 4 | 298 | 40 | 328 | 1.67e-60 | 196 |
MS.gene025145.t1 | AT5G22410 | 39.527 | 296 | 164 | 9 | 5 | 295 | 37 | 322 | 4.06e-60 | 195 |
MS.gene025145.t1 | AT2G39040 | 40.132 | 304 | 166 | 7 | 4 | 298 | 54 | 350 | 8.55e-59 | 192 |
MS.gene025145.t1 | AT1G30870 | 39.333 | 300 | 164 | 8 | 5 | 299 | 60 | 346 | 7.84e-58 | 189 |
MS.gene025145.t1 | AT4G31760 | 37.884 | 293 | 167 | 7 | 11 | 298 | 44 | 326 | 4.26e-57 | 187 |
MS.gene025145.t1 | AT4G26010 | 37.919 | 298 | 164 | 7 | 4 | 298 | 30 | 309 | 4.76e-57 | 186 |
MS.gene025145.t1 | AT4G26010 | 37.919 | 298 | 164 | 7 | 4 | 298 | 58 | 337 | 7.68e-57 | 186 |
MS.gene025145.t1 | AT3G28200 | 36.304 | 303 | 170 | 5 | 4 | 298 | 29 | 316 | 1.99e-56 | 185 |
MS.gene025145.t1 | AT1G34510 | 35.354 | 297 | 173 | 6 | 4 | 298 | 30 | 309 | 2.66e-54 | 179 |
MS.gene025145.t1 | AT1G24110 | 36.156 | 307 | 170 | 5 | 4 | 298 | 30 | 322 | 3.51e-54 | 179 |
MS.gene025145.t1 | AT4G21960 | 33.333 | 309 | 178 | 5 | 2 | 299 | 37 | 328 | 1.25e-53 | 178 |
MS.gene025145.t1 | AT2G37130 | 33.444 | 302 | 186 | 6 | 2 | 298 | 5 | 296 | 2.50e-46 | 158 |
MS.gene025145.t1 | AT2G37130 | 33.113 | 302 | 187 | 5 | 2 | 298 | 36 | 327 | 5.98e-46 | 158 |
MS.gene025145.t1 | AT5G39580 | 51.190 | 168 | 79 | 3 | 3 | 170 | 32 | 196 | 2.01e-44 | 151 |
MS.gene025145.t1 | AT3G17070 | 31.126 | 302 | 193 | 5 | 4 | 298 | 46 | 339 | 4.16e-42 | 148 |
MS.gene025145.t1 | AT4G25980 | 46.835 | 158 | 82 | 2 | 4 | 161 | 79 | 234 | 8.04e-41 | 143 |
MS.gene025145.t1 | AT3G17070 | 30.303 | 264 | 168 | 6 | 38 | 294 | 18 | 272 | 4.86e-33 | 123 |
MS.gene025145.t1 | AT2G24800 | 40.704 | 199 | 105 | 6 | 4 | 195 | 39 | 231 | 6.21e-33 | 121 |
MS.gene025145.t1 | AT1G77490 | 29.064 | 203 | 107 | 8 | 87 | 280 | 165 | 339 | 2.82e-14 | 73.2 |
MS.gene025145.t1 | AT1G77490 | 29.064 | 203 | 107 | 8 | 87 | 280 | 165 | 339 | 3.44e-14 | 72.8 |
MS.gene025145.t1 | AT3G42570 | 30.201 | 149 | 95 | 3 | 14 | 161 | 9 | 149 | 1.77e-13 | 67.4 |
Find 47 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTTCAAGAATTTACTTAA+TGG | 0.187588 | 2.4:-50002583 | MS.gene025145:CDS |
TTTCATTCTCACTATAATAT+TGG | 0.220447 | 2.4:+50002485 | None:intergenic |
AAAGACGTTGTTACTTTATC+AGG | 0.235960 | 2.4:-50003764 | MS.gene025145:intron |
CATCACTTGAAAAGAGAATT+TGG | 0.238726 | 2.4:+50002539 | None:intergenic |
GGGAATATAAATCCACTTAT+TGG | 0.243677 | 2.4:-50002421 | MS.gene025145:CDS |
TCAAATTGATCAATTGAGTA+TGG | 0.254466 | 2.4:+50002613 | None:intergenic |
TCTTTAGGTGCCCACACTAT+TGG | 0.348442 | 2.4:-50002784 | MS.gene025145:intron |
CCTCTAGCTGAATTTCTGTT+TGG | 0.364874 | 2.4:+50004166 | None:intergenic |
CACTTCAACCACTAAACAAT+TGG | 0.372539 | 2.4:-50002509 | MS.gene025145:CDS |
CCTAGCTGAACGTACCAAAA+AGG | 0.375211 | 2.4:+50003899 | None:intergenic |
AACAGAATCTCTAGCAACTA+TGG | 0.388400 | 2.4:+50004066 | None:intergenic |
GATGGTTCAGTTCTGCTTGA+TGG | 0.400241 | 2.4:-50004217 | MS.gene025145:CDS |
AACAGATTATTCAACTTCTC+TGG | 0.426365 | 2.4:-50002736 | MS.gene025145:CDS |
TGCCTATGCTATGATTAAGA+TGG | 0.431308 | 2.4:-50002443 | MS.gene025145:CDS |
ATATTGGACCAATTGTTTAG+TGG | 0.439020 | 2.4:+50002501 | None:intergenic |
TTTGGCTCTCAGGGTTGTGA+TGG | 0.446467 | 2.4:-50004235 | MS.gene025145:intron |
AAGAATTTACTTAATGGAAA+GGG | 0.454512 | 2.4:-50002577 | MS.gene025145:CDS |
GCCTATGCTATGATTAAGAT+GGG | 0.460291 | 2.4:-50002442 | MS.gene025145:CDS |
TTACATTTACAAAGCAATCA+TGG | 0.460562 | 2.4:+50005114 | None:intergenic |
AAGACCAACGTTATCAAACT+TGG | 0.468625 | 2.4:+50003793 | None:intergenic |
CAAGAATTTACTTAATGGAA+AGG | 0.474701 | 2.4:-50002578 | MS.gene025145:CDS |
TTGGTTCTGAGGGAGAGATT+AGG | 0.479464 | 2.4:-50002402 | MS.gene025145:CDS |
TCATATTCTAGAGTATTGTC+TGG | 0.493442 | 2.4:+50002703 | None:intergenic |
GCTAGGACGCAGAGATGGAT+TGG | 0.510343 | 2.4:-50003882 | MS.gene025145:CDS |
TCTCCCTCAGAACCAATAAG+TGG | 0.511178 | 2.4:+50002409 | None:intergenic |
ATAGTACTTAGTGAGTCAAA+TGG | 0.513048 | 2.4:+50003821 | None:intergenic |
AATCCACTTATTGGTTCTGA+GGG | 0.517484 | 2.4:-50002412 | MS.gene025145:CDS |
AAATCCACTTATTGGTTCTG+AGG | 0.528451 | 2.4:-50002413 | MS.gene025145:CDS |
CAAATTGATCAATTGAGTAT+GGG | 0.540687 | 2.4:+50002614 | None:intergenic |
GAAGTCATAGATAGAATCAA+AGG | 0.544495 | 2.4:-50004139 | MS.gene025145:CDS |
CAAAACTTGTGTCCACAAGA+TGG | 0.554038 | 2.4:-50002664 | MS.gene025145:CDS |
ATTTCCAAGTTTGATAACGT+TGG | 0.559993 | 2.4:-50003797 | MS.gene025145:CDS |
GTGTTACCATCTCCATCTTG+TGG | 0.563148 | 2.4:+50002652 | None:intergenic |
ACCTAGCTCGTCCAATAGTG+TGG | 0.565589 | 2.4:+50002773 | None:intergenic |
CTTAGTGAGTCAAATGGAGA+AGG | 0.571397 | 2.4:+50003827 | None:intergenic |
TATGGCTAATATATCAGCAC+AGG | 0.582335 | 2.4:+50004084 | None:intergenic |
CCCCATCTTAATCATAGCAT+AGG | 0.598668 | 2.4:+50002441 | None:intergenic |
AGATAGAATCAAAGGTTCAG+TGG | 0.599216 | 2.4:-50004131 | MS.gene025145:CDS |
GTTCAGCTAGGACGCAGAGA+TGG | 0.601311 | 2.4:-50003887 | MS.gene025145:CDS |
CCAAACAGAAATTCAGCTAG+AGG | 0.612793 | 2.4:-50004166 | MS.gene025145:CDS |
TTGTGTCCACAAGATGGAGA+TGG | 0.623591 | 2.4:-50002658 | MS.gene025145:CDS |
CCTAGCTCGTCCAATAGTGT+GGG | 0.634190 | 2.4:+50002774 | None:intergenic |
AATAAATGAAGAGATTCGAA+TGG | 0.634769 | 2.4:-50005162 | MS.gene025145:CDS |
CCCACACTATTGGACGAGCT+AGG | 0.650505 | 2.4:-50002774 | MS.gene025145:CDS |
TCAGTGGAGAGTTCATGTAG+TGG | 0.653025 | 2.4:-50004115 | MS.gene025145:CDS |
ATTGGTCTCAAACAAAACAC+TGG | 0.668930 | 2.4:-50003864 | MS.gene025145:CDS |
CCTATGCTATGATTAAGATG+GGG | 0.675465 | 2.4:-50002441 | MS.gene025145:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCTATTGTATAAAAAATT+TGG | - | chr2.4:50004513-50004532 | MS.gene025145:intron | 10.0% |
!! | AAAATGTTGGATAAATAAAA+AGG | + | chr2.4:50003560-50003579 | None:intergenic | 15.0% |
!! | AAATATCTAAATGTTTCATT+TGG | - | chr2.4:50002409-50002428 | MS.gene025145:CDS | 15.0% |
!! | CACAACAATTAATATATTAA+CGG | - | chr2.4:50004295-50004314 | MS.gene025145:intron | 15.0% |
!!! | ACTTATTTTCATAAACTTTT+TGG | - | chr2.4:50004799-50004818 | MS.gene025145:intron | 15.0% |
!!! | ATATTAATGATTTTAAGCTA+AGG | - | chr2.4:50004213-50004232 | MS.gene025145:CDS | 15.0% |
!!! | CAAATAATTAATTTGACTAT+AGG | + | chr2.4:50004081-50004100 | None:intergenic | 15.0% |
!!! | GAATGAAAGATTTTTTTTTA+TGG | - | chr2.4:50005343-50005362 | MS.gene025145:intron | 15.0% |
!!! | TATAGAAATTTAGAGTAATT+TGG | - | chr2.4:50004158-50004177 | MS.gene025145:CDS | 15.0% |
!!! | TATTAATGATTTTAAGCTAA+GGG | - | chr2.4:50004214-50004233 | MS.gene025145:CDS | 15.0% |
!!! | TTTATTTAAATAGTCTTTTG+TGG | + | chr2.4:50003236-50003255 | None:intergenic | 15.0% |
!!! | TTTTATTTATCCAACATTTT+TGG | - | chr2.4:50003560-50003579 | MS.gene025145:intron | 15.0% |
!! | AAGAATTTACTTAATGGAAA+GGG | - | chr2.4:50005236-50005255 | MS.gene025145:intron | 20.0% |
!! | ATTCCAATGCTTATAAAAAA+AGG | + | chr2.4:50003503-50003522 | None:intergenic | 20.0% |
!! | ATTGATCTAATAGTGAAAAT+CGG | + | chr2.4:50003098-50003117 | None:intergenic | 20.0% |
!! | TAACTATTGTAAAAAGATCA+GGG | + | chr2.4:50002612-50002631 | None:intergenic | 20.0% |
!! | TACTTCAAGAATTTACTTAA+TGG | - | chr2.4:50005230-50005249 | MS.gene025145:intron | 20.0% |
!! | TGTCAAAAAAATCACATATA+TGG | - | chr2.4:50004111-50004130 | MS.gene025145:CDS | 20.0% |
!! | TTAATTGTTGTGTTCATATT+TGG | + | chr2.4:50004287-50004306 | None:intergenic | 20.0% |
!! | TTTCATTCTCACTATAATAT+TGG | + | chr2.4:50005331-50005350 | None:intergenic | 20.0% |
!!! | AAATTTTAAGAGACTATGTT+TGG | - | chr2.4:50003019-50003038 | MS.gene025145:intron | 20.0% |
!!! | AATTTGGTAATACGAAAAAA+TGG | - | chr2.4:50004529-50004548 | MS.gene025145:intron | 20.0% |
!!! | ATCTGAAAGAATTTTTTCTA+TGG | - | chr2.4:50003275-50003294 | MS.gene025145:intron | 20.0% |
!!! | CAAACTGTCTTTTTTATATT+TGG | - | chr2.4:50004597-50004616 | MS.gene025145:intron | 20.0% |
!!! | TTGTATAGTTTTATTGAAGT+AGG | + | chr2.4:50002781-50002800 | None:intergenic | 20.0% |
!!! | TTTGTTTCTATAAGCTATTT+GGG | + | chr2.4:50004728-50004747 | None:intergenic | 20.0% |
! | AATAAATGAAGAGATTCGAA+TGG | - | chr2.4:50002651-50002670 | MS.gene025145:CDS | 25.0% |
! | ACATAGTCTCTTAAAATTTG+TGG | + | chr2.4:50003018-50003037 | None:intergenic | 25.0% |
! | ACGGGTTTAAACTATAATAA+AGG | - | chr2.4:50004261-50004280 | MS.gene025145:intron | 25.0% |
! | CAAATTGATCAATTGAGTAT+GGG | + | chr2.4:50005202-50005221 | None:intergenic | 25.0% |
! | CAAGAATTTACTTAATGGAA+AGG | - | chr2.4:50005235-50005254 | MS.gene025145:intron | 25.0% |
! | CTAACTATTGTAAAAAGATC+AGG | + | chr2.4:50002613-50002632 | None:intergenic | 25.0% |
! | CTACTATTTCCTAAATTTGA+GGG | - | chr2.4:50003340-50003359 | MS.gene025145:intron | 25.0% |
! | CTCATATTACATTAAGACAA+AGG | - | chr2.4:50004939-50004958 | MS.gene025145:intron | 25.0% |
! | GGTAAATGAATTGAATTTAG+AGG | + | chr2.4:50004984-50005003 | None:intergenic | 25.0% |
! | TAATTGAACTTGAACATACT+AGG | + | chr2.4:50003775-50003794 | None:intergenic | 25.0% |
! | TAGCATGCATAAATAGAAAT+TGG | + | chr2.4:50005005-50005024 | None:intergenic | 25.0% |
! | TATCTAAATGTTTCATTTGG+TGG | - | chr2.4:50002412-50002431 | MS.gene025145:CDS | 25.0% |
! | TCAAATTGATCAATTGAGTA+TGG | + | chr2.4:50005203-50005222 | None:intergenic | 25.0% |
! | TCATATCTCATTTGATTCAA+TGG | + | chr2.4:50003129-50003148 | None:intergenic | 25.0% |
! | TTACATTTACAAAGCAATCA+TGG | + | chr2.4:50002702-50002721 | None:intergenic | 25.0% |
!! | AAAGTTTTTGTCTTTGTTAG+TGG | - | chr2.4:50004330-50004349 | MS.gene025145:intron | 25.0% |
!! | AAGTTTTTGTCTTTGTTAGT+GGG | - | chr2.4:50004331-50004350 | MS.gene025145:intron | 25.0% |
!! | TAATAGTGAAAATCGGTTTA+TGG | + | chr2.4:50003091-50003110 | None:intergenic | 25.0% |
!! | TATGCATGCTAATTTTCTTT+AGG | - | chr2.4:50005014-50005033 | MS.gene025145:intron | 25.0% |
!! | TTTTACAATAGTTAGAAGAG+AGG | - | chr2.4:50002618-50002637 | MS.gene025145:CDS | 25.0% |
!! | TTTTAGTCCTTACAAATGAA+GGG | + | chr2.4:50003380-50003399 | None:intergenic | 25.0% |
!!! | AATTTTAGTCCCTCAAATTT+AGG | + | chr2.4:50003352-50003371 | None:intergenic | 25.0% |
!!! | ATTTTAGTCCTTACAAATGA+AGG | + | chr2.4:50003381-50003400 | None:intergenic | 25.0% |
!!! | CTTTGTTTCTATAAGCTATT+TGG | + | chr2.4:50004729-50004748 | None:intergenic | 25.0% |
!!! | TAGCCTTTTTTTATAAGCAT+TGG | - | chr2.4:50003497-50003516 | MS.gene025145:intron | 25.0% |
!!! | TGAAAGAATTTTTTCTATGG+AGG | - | chr2.4:50003278-50003297 | MS.gene025145:intron | 25.0% |
AACAGATTATTCAACTTCTC+TGG | - | chr2.4:50005077-50005096 | MS.gene025145:intron | 30.0% | |
AAGAGTTTGATTGGAGTTTA+GGG | + | chr2.4:50004373-50004392 | None:intergenic | 30.0% | |
ACGTTGTCCTGTAAAAATAT+GGG | + | chr2.4:50002588-50002607 | None:intergenic | 30.0% | |
ACTAAATCTCCCACATAAAT+AGG | + | chr2.4:50004573-50004592 | None:intergenic | 30.0% | |
AGATATGATGTGACTTCTAT+TGG | - | chr2.4:50003141-50003160 | MS.gene025145:intron | 30.0% | |
ATAACATTAACATCACCCTA+CGG | + | chr2.4:50002856-50002875 | None:intergenic | 30.0% | |
ATAGTACTTAGTGAGTCAAA+TGG | + | chr2.4:50003995-50004014 | None:intergenic | 30.0% | |
ATATTGGACCAATTGTTTAG+TGG | + | chr2.4:50005315-50005334 | None:intergenic | 30.0% | |
CATCACTTGAAAAGAGAATT+TGG | + | chr2.4:50005277-50005296 | None:intergenic | 30.0% | |
CTCACCTATACACAATAAAT+TGG | + | chr2.4:50003052-50003071 | None:intergenic | 30.0% | |
GAAGCCAATTTATTGTGTAT+AGG | - | chr2.4:50003045-50003064 | MS.gene025145:intron | 30.0% | |
GAAGTCATAGATAGAATCAA+AGG | - | chr2.4:50003674-50003693 | MS.gene025145:intron | 30.0% | |
GAATGAGTCACATTAGTTAA+AGG | - | chr2.4:50004238-50004257 | MS.gene025145:intron | 30.0% | |
GCATAGTTAATTAAGTGCTT+AGG | + | chr2.4:50004884-50004903 | None:intergenic | 30.0% | |
GCTACTATTTCCTAAATTTG+AGG | - | chr2.4:50003339-50003358 | MS.gene025145:intron | 30.0% | |
GGGAATATAAATCCACTTAT+TGG | - | chr2.4:50005392-50005411 | MS.gene025145:intron | 30.0% | |
GGTGCAAAATTTGAGAAAAT+TGG | + | chr2.4:50002997-50003016 | None:intergenic | 30.0% | |
GTTACTTAGTGAGATGTATT+TGG | + | chr2.4:50002467-50002486 | None:intergenic | 30.0% | |
TAAGAGTTTGATTGGAGTTT+AGG | + | chr2.4:50004374-50004393 | None:intergenic | 30.0% | |
TATTCTTGGGAGAGTTTATT+TGG | - | chr2.4:50004432-50004451 | MS.gene025145:intron | 30.0% | |
TCAAATCTTATATAGCCGTA+GGG | - | chr2.4:50002838-50002857 | MS.gene025145:intron | 30.0% | |
TGGATTTGTAAGAGTTTGAT+TGG | + | chr2.4:50004382-50004401 | None:intergenic | 30.0% | |
TTCAAATCTTATATAGCCGT+AGG | - | chr2.4:50002837-50002856 | MS.gene025145:intron | 30.0% | |
TTGCTACGTGACTAAAATAT+CGG | - | chr2.4:50004473-50004492 | MS.gene025145:intron | 30.0% | |
! | AGTTTTTGTCTTTGTTAGTG+GGG | - | chr2.4:50004332-50004351 | MS.gene025145:intron | 30.0% |
! | GTGATCATATTTTGTAGAGT+GGG | - | chr2.4:50003888-50003907 | MS.gene025145:CDS | 30.0% |
! | TGATCATATTTTGTAGAGTG+GGG | - | chr2.4:50003889-50003908 | MS.gene025145:CDS | 30.0% |
! | TGTGATCATATTTTGTAGAG+TGG | - | chr2.4:50003887-50003906 | MS.gene025145:CDS | 30.0% |
!! | AAAATATCGGGTTCAAGTTT+TGG | - | chr2.4:50004486-50004505 | MS.gene025145:intron | 30.0% |
!! | AAAGACGTTGTTACTTTATC+AGG | - | chr2.4:50004049-50004068 | MS.gene025145:intron | 30.0% |
!! | ATTTCCAAGTTTGATAACGT+TGG | - | chr2.4:50004016-50004035 | MS.gene025145:intron | 30.0% |
!! | TCATATTCTAGAGTATTGTC+TGG | + | chr2.4:50005113-50005132 | None:intergenic | 30.0% |
AAAATGGTGAGACATCTTTC+CGG | - | chr2.4:50004545-50004564 | MS.gene025145:intron | 35.0% | |
AACAGAATCTCTAGCAACTA+TGG | + | chr2.4:50003750-50003769 | None:intergenic | 35.0% | |
AAGACCAACGTTATCAAACT+TGG | + | chr2.4:50004023-50004042 | None:intergenic | 35.0% | |
ACATTGACACAAGAAACGTT+TGG | + | chr2.4:50004909-50004928 | None:intergenic | 35.0% | |
AGATAGAATCAAAGGTTCAG+TGG | - | chr2.4:50003682-50003701 | MS.gene025145:intron | 35.0% | |
AGTCACATTAGTTAAAGGAC+GGG | - | chr2.4:50004243-50004262 | MS.gene025145:intron | 35.0% | |
CACGTTGTCCTGTAAAAATA+TGG | + | chr2.4:50002589-50002608 | None:intergenic | 35.0% | |
CACTTCAACCACTAAACAAT+TGG | - | chr2.4:50005304-50005323 | MS.gene025145:intron | 35.0% | |
CCTATGCTATGATTAAGATG+GGG | - | chr2.4:50005372-50005391 | MS.gene025145:intron | 35.0% | |
CGTTGTCCTGTAAAAATATG+GGG | + | chr2.4:50002587-50002606 | None:intergenic | 35.0% | |
CTCACCTGAAAGATATTCTT+GGG | - | chr2.4:50004419-50004438 | MS.gene025145:intron | 35.0% | |
GAGTCACATTAGTTAAAGGA+CGG | - | chr2.4:50004242-50004261 | MS.gene025145:intron | 35.0% | |
GCCTATGCTATGATTAAGAT+GGG | - | chr2.4:50005371-50005390 | MS.gene025145:intron | 35.0% | |
GTGAAAAACACGCTTATGTA+TGG | - | chr2.4:50003163-50003182 | MS.gene025145:intron | 35.0% | |
TAAAAATATGGGGTCAATCG+AGG | + | chr2.4:50002577-50002596 | None:intergenic | 35.0% | |
TATGGCTAATATATCAGCAC+AGG | + | chr2.4:50003732-50003751 | None:intergenic | 35.0% | |
TCTCACCTGAAAGATATTCT+TGG | - | chr2.4:50004418-50004437 | MS.gene025145:intron | 35.0% | |
TGCCTATGCTATGATTAAGA+TGG | - | chr2.4:50005370-50005389 | MS.gene025145:intron | 35.0% | |
TGCTACGTGACTAAAATATC+GGG | - | chr2.4:50004474-50004493 | MS.gene025145:intron | 35.0% | |
TTACCAACCCTTCATTTGTA+AGG | - | chr2.4:50003370-50003389 | MS.gene025145:intron | 35.0% | |
TTTCCGGATCCTATTTATGT+GGG | - | chr2.4:50004561-50004580 | MS.gene025145:intron | 35.0% | |
! | ATTGGTCTCAAACAAAACAC+TGG | - | chr2.4:50003949-50003968 | MS.gene025145:intron | 35.0% |
! | GATCATATTTTGTAGAGTGG+GGG | - | chr2.4:50003890-50003909 | MS.gene025145:CDS | 35.0% |
!! | AAATCCACTTATTGGTTCTG+AGG | - | chr2.4:50005400-50005419 | MS.gene025145:intron | 35.0% |
!! | AATCCACTTATTGGTTCTGA+GGG | - | chr2.4:50005401-50005420 | MS.gene025145:intron | 35.0% |
!! | GAGTTTCTTCATTTTGAGTG+TGG | - | chr2.4:50002537-50002556 | MS.gene025145:CDS | 35.0% |
!! | GATTGACCCCATATTTTTAC+AGG | - | chr2.4:50002578-50002597 | MS.gene025145:CDS | 35.0% |
AGTCCTTACAAATGAAGGGT+TGG | + | chr2.4:50003376-50003395 | None:intergenic | 40.0% | |
CAAAACTTGTGTCCACAAGA+TGG | - | chr2.4:50005149-50005168 | MS.gene025145:CDS | 40.0% | |
CCAAACAGAAATTCAGCTAG+AGG | - | chr2.4:50003647-50003666 | MS.gene025145:intron | 40.0% | |
CCCCATCTTAATCATAGCAT+AGG | + | chr2.4:50005375-50005394 | None:intergenic | 40.0% | |
CCTCTAGCTGAATTTCTGTT+TGG | + | chr2.4:50003650-50003669 | None:intergenic | 40.0% | |
CTCTCCCAAGAATATCTTTC+AGG | + | chr2.4:50004426-50004445 | None:intergenic | 40.0% | |
CTTAGTGAGTCAAATGGAGA+AGG | + | chr2.4:50003989-50004008 | None:intergenic | 40.0% | |
CTTTCCGGATCCTATTTATG+TGG | - | chr2.4:50004560-50004579 | MS.gene025145:intron | 40.0% | |
TCTCCCACATAAATAGGATC+CGG | + | chr2.4:50004567-50004586 | None:intergenic | 40.0% | |
TCTTTGTTAGTGGGGTGAAA+GGG | - | chr2.4:50004340-50004359 | MS.gene025145:intron | 40.0% | |
! | ATATCTTTCAGGTGAGAGCT+TGG | + | chr2.4:50004415-50004434 | None:intergenic | 40.0% |
! | GTAGAGCTACTGCATGTTTT+TGG | - | chr2.4:50002509-50002528 | MS.gene025145:CDS | 40.0% |
!!! | ATCCAACATTTTTGGCTCTC+AGG | - | chr2.4:50003568-50003587 | MS.gene025145:intron | 40.0% |
!!! | TCCAACATTTTTGGCTCTCA+GGG | - | chr2.4:50003569-50003588 | MS.gene025145:intron | 40.0% |
ACCCTGAGAGCCAAAAATGT+TGG | + | chr2.4:50003573-50003592 | None:intergenic | 45.0% | |
CCTAGCTGAACGTACCAAAA+AGG | + | chr2.4:50003917-50003936 | None:intergenic | 45.0% | |
GATGGTTCAGTTCTGCTTGA+TGG | - | chr2.4:50003596-50003615 | MS.gene025145:intron | 45.0% | |
GTCTTTGTTAGTGGGGTGAA+AGG | - | chr2.4:50004339-50004358 | MS.gene025145:intron | 45.0% | |
GTGTTACCATCTCCATCTTG+TGG | + | chr2.4:50005164-50005183 | None:intergenic | 45.0% | |
TCAGTGGAGAGTTCATGTAG+TGG | - | chr2.4:50003698-50003717 | MS.gene025145:intron | 45.0% | |
TCTCCCTCAGAACCAATAAG+TGG | + | chr2.4:50005407-50005426 | None:intergenic | 45.0% | |
TCTTTAGGTGCCCACACTAT+TGG | - | chr2.4:50005029-50005048 | MS.gene025145:intron | 45.0% | |
TTGTGTCCACAAGATGGAGA+TGG | - | chr2.4:50005155-50005174 | MS.gene025145:CDS | 45.0% | |
!! | CCTTTTTGGTACGTTCAGCT+AGG | - | chr2.4:50003914-50003933 | MS.gene025145:intron | 45.0% |
!! | TTGGTTCTGAGGGAGAGATT+AGG | - | chr2.4:50005411-50005430 | MS.gene025145:intron | 45.0% |
ACCTAGCTCGTCCAATAGTG+TGG | + | chr2.4:50005043-50005062 | None:intergenic | 50.0% | |
CCTAGCTCGTCCAATAGTGT+GGG | + | chr2.4:50005042-50005061 | None:intergenic | 50.0% | |
! | TCTTTCAGGTGAGAGCTTGG+TGG | + | chr2.4:50004412-50004431 | None:intergenic | 50.0% |
! | TGTAGAGTGGGGGTCCTTTT+TGG | - | chr2.4:50003900-50003919 | MS.gene025145:CDS | 50.0% |
!! | TTTGGCTCTCAGGGTTGTGA+TGG | - | chr2.4:50003578-50003597 | MS.gene025145:intron | 50.0% |
CCCACACTATTGGACGAGCT+AGG | - | chr2.4:50005039-50005058 | MS.gene025145:intron | 55.0% | |
GCTAGGACGCAGAGATGGAT+TGG | - | chr2.4:50003931-50003950 | MS.gene025145:intron | 55.0% | |
GGGGTCAATCGAGGTCTCAT+AGG | + | chr2.4:50002568-50002587 | None:intergenic | 55.0% | |
GTTCAGCTAGGACGCAGAGA+TGG | - | chr2.4:50003926-50003945 | MS.gene025145:intron | 55.0% | |
!! | GAGAGCTTGGTGGTGAGCTA+TGG | + | chr2.4:50004402-50004421 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 50002375 | 50005460 | 50002375 | ID=MS.gene025145 |
chr2.4 | mRNA | 50002375 | 50005460 | 50002375 | ID=MS.gene025145.t1;Parent=MS.gene025145 |
chr2.4 | exon | 50005456 | 50005460 | 50005456 | ID=MS.gene025145.t1.exon1;Parent=MS.gene025145.t1 |
chr2.4 | CDS | 50005456 | 50005460 | 50005456 | ID=cds.MS.gene025145.t1;Parent=MS.gene025145.t1 |
chr2.4 | exon | 50005118 | 50005235 | 50005118 | ID=MS.gene025145.t1.exon2;Parent=MS.gene025145.t1 |
chr2.4 | CDS | 50005118 | 50005235 | 50005118 | ID=cds.MS.gene025145.t1;Parent=MS.gene025145.t1 |
chr2.4 | exon | 50004060 | 50004245 | 50004060 | ID=MS.gene025145.t1.exon3;Parent=MS.gene025145.t1 |
chr2.4 | CDS | 50004060 | 50004245 | 50004060 | ID=cds.MS.gene025145.t1;Parent=MS.gene025145.t1 |
chr2.4 | exon | 50003765 | 50003930 | 50003765 | ID=MS.gene025145.t1.exon4;Parent=MS.gene025145.t1 |
chr2.4 | CDS | 50003765 | 50003930 | 50003765 | ID=cds.MS.gene025145.t1;Parent=MS.gene025145.t1 |
chr2.4 | exon | 50002375 | 50002799 | 50002375 | ID=MS.gene025145.t1.exon5;Parent=MS.gene025145.t1 |
chr2.4 | CDS | 50002375 | 50002799 | 50002375 | ID=cds.MS.gene025145.t1;Parent=MS.gene025145.t1 |
Gene Sequence |
Protein sequence |