AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85778

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85778.t1 MTR_2g040000 96.104 308 12 0 1 308 25 332 0.0 617
MS.gene85778.t1 MTR_4g125940 71.104 308 88 1 1 308 24 330 4.54e-160 449
MS.gene85778.t1 MTR_4g125940 73.913 276 71 1 33 308 1 275 6.39e-148 416
MS.gene85778.t1 MTR_1g054205 56.352 307 128 2 4 307 23 326 2.16e-122 354
MS.gene85778.t1 MTR_7g093370 56.352 307 128 2 4 307 68 371 3.99e-121 352
MS.gene85778.t1 MTR_5g021060 53.770 305 135 2 5 307 30 330 1.17e-109 322
MS.gene85778.t1 MTR_8g076820 52.903 310 140 2 1 308 26 331 3.38e-109 320
MS.gene85778.t1 MTR_2g028980 52.941 306 139 2 4 307 28 330 7.20e-107 315
MS.gene85778.t1 MTR_2g029815 51.140 307 145 2 4 308 28 331 1.28e-106 315
MS.gene85778.t1 MTR_2g029800 51.466 307 144 2 4 308 28 331 1.15e-105 312
MS.gene85778.t1 MTR_5g083860 53.094 307 128 5 5 307 31 325 1.39e-103 306
MS.gene85778.t1 MTR_2g084110 51.634 306 134 4 4 307 24 317 2.60e-103 305
MS.gene85778.t1 MTR_2g029830 50.489 307 147 2 4 308 27 330 3.71e-103 306
MS.gene85778.t1 MTR_5g017860 51.987 302 136 4 9 307 31 326 1.27e-102 303
MS.gene85778.t1 MTR_2g029820 49.511 307 150 2 4 308 28 331 1.92e-102 304
MS.gene85778.t1 MTR_2g084010 51.307 306 136 3 4 307 24 318 2.02e-102 303
MS.gene85778.t1 MTR_2g029560 50.163 307 148 2 4 308 23 326 3.05e-102 303
MS.gene85778.t1 MTR_3g094650 52.273 308 131 5 4 307 27 322 3.93e-102 302
MS.gene85778.t1 MTR_3g072190 51.299 308 136 3 2 307 23 318 5.63e-102 301
MS.gene85778.t1 MTR_5g017850 51.656 302 137 4 9 307 31 326 6.48e-102 301
MS.gene85778.t1 MTR_3g466200 51.935 310 130 6 4 307 24 320 3.75e-101 300
MS.gene85778.t1 MTR_2g084080 50.000 306 139 3 4 307 24 317 4.76e-101 299
MS.gene85778.t1 MTR_2g084020 50.654 306 138 3 4 307 24 318 4.16e-100 297
MS.gene85778.t1 MTR_2g029860 49.346 306 150 2 4 307 28 330 8.52e-100 297
MS.gene85778.t1 MTR_7g072510 48.544 309 145 3 1 307 16 312 1.77e-99 295
MS.gene85778.t1 MTR_2g029730 50.000 306 148 2 4 307 24 326 5.27e-99 295
MS.gene85778.t1 MTR_5g074970 52.258 310 130 5 4 307 29 326 5.37e-99 294
MS.gene85778.t1 MTR_2g029750 49.673 306 149 2 4 307 28 330 1.60e-98 294
MS.gene85778.t1 MTR_2g029740 49.020 306 151 2 4 307 28 330 2.67e-98 293
MS.gene85778.t1 MTR_2g084000 47.249 309 150 3 1 307 22 319 2.35e-97 290
MS.gene85778.t1 MTR_4g029170 49.837 307 138 5 5 307 27 321 2.80e-97 290
MS.gene85778.t1 MTR_3g094670 53.247 308 128 5 4 307 27 322 7.53e-97 288
MS.gene85778.t1 MTR_4g083710 48.544 309 144 4 4 307 26 324 8.04e-97 288
MS.gene85778.t1 MTR_2g029850 49.834 301 146 2 9 307 33 330 1.80e-96 289
MS.gene85778.t1 MTR_7g072480 50.000 306 139 4 4 307 23 316 9.43e-96 286
MS.gene85778.t1 MTR_3g094630 53.571 308 127 5 4 307 27 322 1.35e-95 285
MS.gene85778.t1 MTR_4g029180 49.835 303 136 5 9 307 31 321 1.75e-95 285
MS.gene85778.t1 MTR_5g014100 50.323 310 143 5 5 307 26 331 2.78e-95 285
MS.gene85778.t1 MTR_4g122640 48.505 301 147 3 9 307 42 336 2.99e-95 285
MS.gene85778.t1 MTR_5g074860 49.511 307 139 6 5 306 29 324 2.87e-93 280
MS.gene85778.t1 MTR_4g030890 48.197 305 148 4 5 307 100 396 7.15e-93 281
MS.gene85778.t1 MTR_4g029200 47.213 305 147 3 5 307 46 338 9.10e-93 279
MS.gene85778.t1 MTR_4g031140 46.405 306 154 4 5 308 28 325 1.15e-92 279
MS.gene85778.t1 MTR_4g074995 48.397 312 127 6 4 307 23 308 2.39e-92 276
MS.gene85778.t1 MTR_5g074760 49.191 309 141 7 4 307 24 321 2.70e-92 277
MS.gene85778.t1 MTR_2g084090 48.052 308 143 5 4 307 24 318 3.12e-92 277
MS.gene85778.t1 MTR_1g022970 48.197 305 153 2 5 307 46 347 1.41e-90 273
MS.gene85778.t1 MTR_5g074740 48.867 309 142 7 4 307 24 321 1.74e-90 272
MS.gene85778.t1 MTR_3g466180 49.346 306 141 3 4 307 30 323 6.08e-90 271
MS.gene85778.t1 MTR_5g049280 45.659 311 163 4 2 308 30 338 1.35e-89 271
MS.gene85778.t1 MTR_2g029910 46.104 308 160 3 4 308 29 333 1.49e-89 271
MS.gene85778.t1 MTR_4g046713 46.906 307 154 5 4 307 26 326 9.57e-89 268
MS.gene85778.t1 MTR_2g008710 47.525 303 147 5 9 307 31 325 3.31e-88 267
MS.gene85778.t1 MTR_5g074710 47.573 309 146 7 4 307 24 321 3.32e-88 266
MS.gene85778.t1 MTR_2g088770 47.855 303 149 5 9 308 30 326 8.79e-87 263
MS.gene85778.t1 MTR_4g114210 46.926 309 151 5 4 307 20 320 2.92e-86 261
MS.gene85778.t1 MTR_4g074990 44.660 309 140 4 4 307 23 305 1.33e-85 259
MS.gene85778.t1 MTR_2g029830 50.385 260 124 2 51 308 6 262 2.62e-84 255
MS.gene85778.t1 MTR_3g467600 45.955 309 152 6 4 307 26 324 7.80e-84 256
MS.gene85778.t1 MTR_4g029190 45.098 306 155 5 5 307 45 340 5.88e-83 254
MS.gene85778.t1 MTR_1g115900 45.955 309 149 7 5 308 27 322 2.68e-82 252
MS.gene85778.t1 MTR_5g022870 45.364 302 150 8 9 307 27 316 1.07e-81 250
MS.gene85778.t1 MTR_7g026990 45.364 302 150 5 9 308 35 323 1.40e-81 249
MS.gene85778.t1 MTR_0155s0040 44.918 305 150 8 5 307 27 315 2.48e-80 246
MS.gene85778.t1 MTR_4g074980 44.771 306 132 5 4 307 24 294 5.83e-80 244
MS.gene85778.t1 MTR_1g101830 42.718 309 164 6 2 307 24 322 1.35e-79 244
MS.gene85778.t1 MTR_3g072190 49.618 262 118 3 48 307 2 251 2.85e-78 239
MS.gene85778.t1 MTR_7g107520 44.371 302 155 6 9 307 29 320 2.62e-77 239
MS.gene85778.t1 MTR_1g086320 45.246 305 156 5 9 307 34 333 8.85e-77 238
MS.gene85778.t1 MTR_7g029030 42.484 306 165 5 4 307 24 320 4.94e-76 235
MS.gene85778.t1 MTR_8g075100 43.709 302 155 8 9 307 30 319 5.11e-76 235
MS.gene85778.t1 MTR_3g092990 42.574 303 166 3 9 308 30 327 3.30e-75 234
MS.gene85778.t1 MTR_1g090760 41.447 304 168 4 9 307 32 330 8.98e-74 230
MS.gene85778.t1 MTR_1g086490 43.590 312 158 5 9 307 34 340 1.24e-73 230
MS.gene85778.t1 MTR_1g009750 40.924 303 170 4 9 307 31 328 5.38e-73 228
MS.gene85778.t1 MTR_4g133800 41.333 300 162 6 10 307 46 333 1.21e-72 227
MS.gene85778.t1 MTR_2g067440 38.671 331 167 6 9 308 64 389 2.24e-72 228
MS.gene85778.t1 MTR_1g025980 43.189 301 157 7 9 306 28 317 2.65e-72 226
MS.gene85778.t1 MTR_6g043280 42.053 302 160 6 9 308 45 333 2.89e-72 226
MS.gene85778.t1 MTR_5g016010 38.961 308 178 4 4 306 26 328 4.16e-72 226
MS.gene85778.t1 MTR_4g074980 48.305 236 111 3 4 234 24 253 1.32e-71 222
MS.gene85778.t1 MTR_5g074860 42.671 307 121 6 5 306 29 285 1.38e-71 223
MS.gene85778.t1 MTR_7g086820 40.333 300 167 6 9 307 24 312 1.76e-71 224
MS.gene85778.t1 MTR_4g127670 40.728 302 172 2 4 303 23 319 4.45e-71 223
MS.gene85778.t1 MTR_1g077000 43.189 301 153 8 9 307 43 327 6.15e-71 223
MS.gene85778.t1 MTR_2g078610 38.024 334 168 6 9 308 80 408 8.80e-71 225
MS.gene85778.t1 MTR_2g437770 41.196 301 164 6 9 308 54 342 4.79e-70 221
MS.gene85778.t1 MTR_2g008160 42.244 303 164 6 9 307 28 323 1.48e-69 219
MS.gene85778.t1 MTR_2g077990 37.725 334 169 6 9 308 80 408 1.76e-69 221
MS.gene85778.t1 MTR_8g062780 41.158 311 174 5 2 308 20 325 7.01e-69 218
MS.gene85778.t1 MTR_1g038680 42.623 305 164 6 9 307 33 332 1.16e-68 217
MS.gene85778.t1 MTR_7g086870 39.735 302 165 6 9 308 26 312 1.31e-68 216
MS.gene85778.t1 MTR_2g099175 38.462 312 179 5 2 308 33 336 1.60e-68 217
MS.gene85778.t1 MTR_2g008730 41.584 303 141 5 9 307 31 301 2.76e-68 215
MS.gene85778.t1 MTR_4g095450 39.806 309 169 6 4 306 26 323 8.47e-68 214
MS.gene85778.t1 MTR_6g043240 40.667 300 163 6 9 307 46 331 3.08e-67 214
MS.gene85778.t1 MTR_6g027440 40.532 301 166 6 9 307 25 314 8.47e-67 212
MS.gene85778.t1 MTR_2g078280 37.855 317 159 5 9 292 80 391 1.15e-65 211
MS.gene85778.t1 MTR_4g087965 38.614 303 172 5 9 303 46 342 7.85e-64 205
MS.gene85778.t1 MTR_3g092990 40.264 303 162 4 9 308 30 316 1.46e-63 203
MS.gene85778.t1 MTR_1g009750 38.206 301 164 5 9 307 31 311 2.11e-62 200
MS.gene85778.t1 MTR_2g067450 38.339 313 165 8 9 308 15 312 3.14e-61 197
MS.gene85778.t1 MTR_6g043460 38.926 298 166 7 9 303 40 324 1.34e-59 194
MS.gene85778.t1 MTR_0147s0010 36.164 318 166 5 9 306 81 381 4.40e-58 191
MS.gene85778.t1 MTR_1g066710 36.184 304 180 7 9 308 31 324 3.72e-57 187
MS.gene85778.t1 MTR_2g008160 37.097 310 149 6 2 307 21 288 3.81e-56 183
MS.gene85778.t1 MTR_3g105790 36.513 304 178 6 9 307 29 322 5.53e-55 181
MS.gene85778.t1 MTR_0286s0010 37.097 310 181 7 4 307 33 334 7.69e-55 181
MS.gene85778.t1 MTR_6g008075 37.097 310 181 7 4 307 33 334 7.69e-55 181
MS.gene85778.t1 MTR_5g033470 35.161 310 181 8 9 307 77 377 3.90e-54 181
MS.gene85778.t1 MTR_4g132490 34.202 307 192 5 4 307 28 327 6.81e-54 179
MS.gene85778.t1 MTR_1g066640 35.048 311 174 7 9 308 31 324 1.27e-53 178
MS.gene85778.t1 MTR_5g074700 41.423 239 112 7 72 307 1 214 3.89e-53 173
MS.gene85778.t1 MTR_4g132110 34.405 311 176 6 9 308 36 329 7.68e-53 176
MS.gene85778.t1 MTR_1g066680 35.197 304 182 5 9 308 31 323 5.28e-52 174
MS.gene85778.t1 MTR_1g066380 33.762 311 178 7 9 308 31 324 5.44e-51 171
MS.gene85778.t1 MTR_4g132110 33.861 316 176 7 9 308 36 334 9.45e-51 171
MS.gene85778.t1 MTR_3g072210 46.154 195 93 3 114 307 55 238 1.56e-47 159
MS.gene85778.t1 MTR_2g008160 50.000 164 80 2 9 172 28 189 3.55e-47 157
MS.gene85778.t1 MTR_2g029880 41.753 194 100 2 115 308 9 189 3.49e-43 147
MS.gene85778.t1 MTR_1g066380 33.579 271 152 7 49 308 3 256 6.30e-41 143
MS.gene85778.t1 MTR_3g105790 37.037 243 140 5 70 307 12 246 1.13e-40 142
MS.gene85778.t1 MTR_7g072490 40.079 252 83 6 51 300 2 187 7.16e-39 136
MS.gene85778.t1 MTR_3g072260 60.550 109 41 1 4 110 25 133 3.68e-38 132
MS.gene85778.t1 MTR_2g077980 32.180 289 146 10 61 308 7 286 2.25e-33 124
MS.gene85778.t1 MTR_2g078560 30.531 226 123 3 108 303 95 316 3.89e-32 122
MS.gene85778.t1 MTR_4g031040 33.333 174 68 4 65 236 4 131 6.71e-22 89.7
MS.gene85778.t1 MTR_5g058120 34.545 165 92 3 139 303 7 155 8.62e-22 92.4
MS.gene85778.t1 MTR_3g462850 35.811 148 91 3 163 308 5 150 3.56e-21 88.2
MS.gene85778.t1 MTR_4g114220 50.562 89 36 2 24 112 22 102 4.26e-21 87.8
MS.gene85778.t1 MTR_6g048160 62.319 69 24 2 44 112 22 88 8.76e-21 85.5
MS.gene85778.t1 MTR_7g086790 32.804 189 103 5 52 238 17 183 2.27e-19 84.7
MS.gene85778.t1 MTR_1g089005 37.956 137 72 4 9 137 19 150 5.65e-17 77.0
MS.gene85778.t1 MTR_1g098320 43.373 83 42 1 225 307 47 124 2.00e-15 72.4
MS.gene85778.t1 MTR_5g074770 39.362 94 52 2 213 306 20 108 1.15e-14 69.3
MS.gene85778.t1 MTR_7g107500 43.478 92 44 3 217 307 13 97 1.14e-13 66.2
MS.gene85778.t1 MTR_2g029930 40.404 99 29 4 4 86 18 102 1.87e-13 65.9
MS.gene85778.t1 MTR_7g086810 32.407 108 49 1 9 116 10 93 7.77e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85778.t1 AT5G19890 62.215 307 111 4 1 307 26 327 3.38e-135 386
MS.gene85778.t1 AT5G06720 55.882 306 130 2 4 307 31 333 1.98e-119 347
MS.gene85778.t1 AT5G06730 54.248 306 135 2 4 307 32 334 5.97e-116 338
MS.gene85778.t1 AT4G36430 53.746 307 136 2 4 308 29 331 4.53e-115 335
MS.gene85778.t1 AT2G18150 53.770 305 135 2 5 307 36 336 1.74e-113 332
MS.gene85778.t1 AT2G18140 52.787 305 138 2 5 307 35 335 1.90e-109 321
MS.gene85778.t1 AT5G66390 51.803 305 141 2 5 307 33 333 3.97e-107 315
MS.gene85778.t1 AT2G38390 50.814 307 145 3 4 307 30 333 7.97e-107 315
MS.gene85778.t1 AT3G50990 51.475 305 142 2 5 307 41 341 2.16e-105 311
MS.gene85778.t1 AT5G05340 52.597 308 128 5 1 303 26 320 8.26e-105 309
MS.gene85778.t1 AT2G38380 51.466 307 143 3 4 307 30 333 9.62e-105 310
MS.gene85778.t1 AT3G32980 50.649 308 147 3 4 308 30 335 1.77e-102 304
MS.gene85778.t1 AT1G49570 52.333 300 133 4 9 303 52 346 3.21e-100 298
MS.gene85778.t1 AT4G08770 49.351 308 151 3 4 308 23 328 2.16e-99 296
MS.gene85778.t1 AT5G19880 52.427 309 139 4 4 307 24 329 5.94e-99 294
MS.gene85778.t1 AT1G44970 51.803 305 142 2 5 307 45 346 8.28e-98 292
MS.gene85778.t1 AT4G16270 51.495 301 138 3 9 307 54 348 2.15e-97 291
MS.gene85778.t1 AT3G49120 49.675 308 150 3 4 308 31 336 1.55e-96 289
MS.gene85778.t1 AT3G49110 49.675 308 150 3 4 308 32 337 1.64e-96 289
MS.gene85778.t1 AT4G08780 47.403 308 157 3 4 308 23 328 3.31e-96 288
MS.gene85778.t1 AT1G14550 46.278 309 153 4 2 307 23 321 7.61e-93 278
MS.gene85778.t1 AT2G35380 49.671 304 146 4 9 307 34 335 4.19e-92 277
MS.gene85778.t1 AT5G58390 52.145 303 130 5 9 307 25 316 8.35e-92 276
MS.gene85778.t1 AT2G22420 45.902 305 155 4 5 307 23 319 5.19e-91 274
MS.gene85778.t1 AT5G64120 47.826 299 147 5 9 307 39 328 3.48e-90 272
MS.gene85778.t1 AT5G58400 48.684 304 139 6 9 307 34 325 2.78e-89 270
MS.gene85778.t1 AT1G68850 43.548 310 166 5 5 308 30 336 3.85e-87 265
MS.gene85778.t1 AT2G41480 48.026 304 145 6 9 307 33 328 1.10e-86 263
MS.gene85778.t1 AT1G14540 44.481 308 159 3 2 307 18 315 2.13e-86 262
MS.gene85778.t1 AT4G11290 45.545 303 156 4 9 307 29 326 1.35e-85 260
MS.gene85778.t1 AT5G39580 47.667 300 147 6 9 307 29 319 8.06e-85 258
MS.gene85778.t1 AT5G15180 44.000 300 161 4 9 307 36 329 4.92e-84 256
MS.gene85778.t1 AT3G01190 45.333 300 155 5 9 307 30 321 1.25e-82 252
MS.gene85778.t1 AT1G05260 43.226 310 169 4 1 308 22 326 6.30e-81 248
MS.gene85778.t1 AT3G21770 43.046 302 165 4 9 308 33 329 3.15e-78 241
MS.gene85778.t1 AT1G05240 42.574 303 163 5 9 307 30 325 1.25e-77 240
MS.gene85778.t1 AT1G05250 42.574 303 163 5 9 307 30 325 1.25e-77 240
MS.gene85778.t1 AT5G64110 44.444 306 162 5 3 307 32 330 2.26e-77 239
MS.gene85778.t1 AT5G17820 42.475 299 159 5 9 307 28 313 2.05e-76 236
MS.gene85778.t1 AT3G03670 43.189 301 163 4 9 307 27 321 5.57e-76 235
MS.gene85778.t1 AT5G42180 42.623 305 161 7 5 306 23 316 1.04e-75 234
MS.gene85778.t1 AT5G17820 42.475 299 159 5 9 307 81 366 4.53e-75 234
MS.gene85778.t1 AT5G51890 41.694 307 165 7 5 307 26 322 1.15e-74 232
MS.gene85778.t1 AT4G37530 41.776 304 167 4 9 307 31 329 1.99e-74 232
MS.gene85778.t1 AT1G71695 42.951 305 157 8 9 308 48 340 3.48e-74 232
MS.gene85778.t1 AT1G77100 45.574 305 147 8 9 307 28 319 1.49e-73 229
MS.gene85778.t1 AT4G25980 41.447 304 166 4 9 307 30 326 2.34e-73 229
MS.gene85778.t1 AT2G18980 41.176 306 172 4 4 307 24 323 6.11e-72 225
MS.gene85778.t1 AT5G14130 40.523 306 174 4 4 307 31 330 6.32e-72 225
MS.gene85778.t1 AT5G14130 40.523 306 174 4 4 307 72 371 1.77e-71 226
MS.gene85778.t1 AT4G30170 40.864 301 170 4 9 307 31 325 2.53e-71 224
MS.gene85778.t1 AT4G37520 39.474 304 174 4 9 307 31 329 2.67e-71 224
MS.gene85778.t1 AT4G33420 42.951 305 156 8 5 307 37 325 7.29e-70 220
MS.gene85778.t1 AT4G33870 37.048 332 166 5 9 303 72 397 9.92e-70 222
MS.gene85778.t1 AT2G35380 48.374 246 122 3 65 307 4 247 1.42e-69 216
MS.gene85778.t1 AT4G17690 40.000 310 172 4 3 308 24 323 1.63e-69 219
MS.gene85778.t1 AT4G33420 42.951 305 156 8 5 307 84 372 2.82e-69 220
MS.gene85778.t1 AT5G64100 41.137 299 168 6 9 307 41 331 1.57e-68 217
MS.gene85778.t1 AT4G37520 38.816 304 173 5 9 307 31 326 1.86e-68 216
MS.gene85778.t1 AT5G24070 39.103 312 174 7 4 308 34 336 4.87e-68 216
MS.gene85778.t1 AT2G43480 40.193 311 170 7 4 307 34 335 1.02e-66 212
MS.gene85778.t1 AT3G49960 38.511 309 180 4 4 307 26 329 7.20e-65 207
MS.gene85778.t1 AT4G37530 44.177 249 134 3 9 252 31 279 2.10e-64 204
MS.gene85778.t1 AT5G67400 38.511 309 180 4 4 307 26 329 5.00e-64 205
MS.gene85778.t1 AT5G47000 38.816 304 173 4 9 308 37 331 1.01e-63 204
MS.gene85778.t1 AT2G24800 40.984 305 164 7 9 307 35 329 2.12e-63 203
MS.gene85778.t1 AT5G22410 40.199 301 165 9 9 304 32 322 2.32e-63 203
MS.gene85778.t1 AT5G40150 38.065 310 174 6 4 307 31 328 2.53e-63 203
MS.gene85778.t1 AT2G34060 38.658 313 178 5 2 305 37 344 2.03e-62 201
MS.gene85778.t1 AT2G39040 40.256 313 171 7 4 307 45 350 2.29e-62 201
MS.gene85778.t1 AT1G30870 39.344 305 167 7 9 308 55 346 1.24e-60 197
MS.gene85778.t1 AT3G28200 37.338 308 178 5 4 307 20 316 1.95e-60 195
MS.gene85778.t1 AT4G31760 37.829 304 174 7 9 307 33 326 4.31e-59 192
MS.gene85778.t1 AT4G26010 38.079 302 166 7 9 307 26 309 3.89e-58 189
MS.gene85778.t1 AT4G26010 38.079 302 166 7 9 307 54 337 7.28e-58 189
MS.gene85778.t1 AT4G21960 34.688 320 175 7 3 308 29 328 6.37e-56 184
MS.gene85778.t1 AT1G34510 35.099 302 177 6 9 308 26 310 5.97e-55 181
MS.gene85778.t1 AT1G24110 35.443 316 184 6 1 307 18 322 1.34e-54 181
MS.gene85778.t1 AT5G39580 51.462 171 80 3 9 179 29 196 7.86e-47 158
MS.gene85778.t1 AT2G37130 33.882 304 186 6 9 307 3 296 8.09e-47 159
MS.gene85778.t1 AT2G37130 33.882 304 186 6 9 307 34 327 2.01e-46 159
MS.gene85778.t1 AT3G17070 31.949 313 192 7 5 307 38 339 4.54e-44 154
MS.gene85778.t1 AT4G25980 46.914 162 84 2 9 170 75 234 1.90e-42 148
MS.gene85778.t1 AT2G24800 41.379 203 106 6 9 204 35 231 1.30e-35 129
MS.gene85778.t1 AT3G17070 31.365 271 164 8 47 307 18 276 2.01e-33 124
MS.gene85778.t1 AT1G77490 25.830 271 144 11 39 289 106 339 3.21e-14 73.2
MS.gene85778.t1 AT1G77490 25.830 271 144 11 39 289 106 339 4.07e-14 72.8
MS.gene85778.t1 AT3G42570 31.333 150 92 4 23 170 9 149 1.28e-12 65.1

Find 50 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCAAGAATTTACTTAA+TGG 0.187588 2.1:-48701161 MS.gene85778:CDS
TTTCATTCTCACTATAATAT+TGG 0.220447 2.1:+48701063 None:intergenic
AAAGACGTTGTTACTTTATC+AGG 0.235960 2.1:-48702868 MS.gene85778:intron
CATCACTTGAAAAGAGAATT+TGG 0.238726 2.1:+48701117 None:intergenic
GGGAATATAAATCCACTTAT+TGG 0.243677 2.1:-48700999 MS.gene85778:CDS
TCAAATTGATCAATTGAGTA+TGG 0.254466 2.1:+48701191 None:intergenic
CCTCTAGCTGAATTTAAGTT+TGG 0.266413 2.1:+48703270 None:intergenic
TCTTTAGGTGCCCACACTAT+TGG 0.348442 2.1:-48701362 MS.gene85778:intron
ATTGTCTGGTTCTTGTGTTC+CGG 0.349407 2.1:+48701295 None:intergenic
CCTAGCTGAACGTACCAAAA+AGG 0.375211 2.1:+48703003 None:intergenic
AACAGAATCTCTAGCAACTA+TGG 0.388400 2.1:+48703170 None:intergenic
GATGGTTCAGTTCTGCTTGA+TGG 0.400241 2.1:-48703321 MS.gene85778:CDS
CACTTCAACCACTAAACAAT+TGG 0.408952 2.1:-48701087 MS.gene85778:CDS
AAGAATTTACTTAATGGAAA+AGG 0.424516 2.1:-48701155 MS.gene85778:CDS
TGCCTATGCTATGATTAAGA+TGG 0.431308 2.1:-48701021 MS.gene85778:CDS
ATATTGGACCAATTGTTTAG+TGG 0.439020 2.1:+48701079 None:intergenic
TCATATTCTAAAGTATTGTC+TGG 0.440491 2.1:+48701281 None:intergenic
TTTGGCTCTCAGGGTTGTGA+TGG 0.446467 2.1:-48703339 MS.gene85778:intron
GCCTATGCTATGATTAAGAT+GGG 0.460291 2.1:-48701020 MS.gene85778:CDS
TTACATTTACAAAGCAATCA+TGG 0.460562 2.1:+48704247 None:intergenic
AACAGATTATTCAACTTCTC+CGG 0.465572 2.1:-48701314 MS.gene85778:CDS
AAGACCAACGTTATCAAACT+TGG 0.468625 2.1:+48702897 None:intergenic
TTGGTTCTGAGGGAGAGATT+AGG 0.479464 2.1:-48700980 MS.gene85778:CDS
AGAGAATTTGGTCAGAGCTA+AGG 0.483371 2.1:+48701129 None:intergenic
GCTAGGACGCAGAGATGGAT+TGG 0.510343 2.1:-48702986 MS.gene85778:CDS
TCTCCCTCAGAACCAATAAG+TGG 0.511178 2.1:+48700987 None:intergenic
ATAGTACTTAGTGAGTCAAA+TGG 0.513048 2.1:+48702925 None:intergenic
AATCCACTTATTGGTTCTGA+GGG 0.517484 2.1:-48700990 MS.gene85778:CDS
AAATCCACTTATTGGTTCTG+AGG 0.528451 2.1:-48700991 MS.gene85778:CDS
TCAGTTCTGCTTGATGGAGA+CGG 0.539101 2.1:-48703315 MS.gene85778:CDS
CAAATTGATCAATTGAGTAT+GGG 0.540687 2.1:+48701192 None:intergenic
GGGGTCAATCGAGGTCTCAT+AGG 0.541891 2.1:+48704381 None:intergenic
CAAAACTTGTGTCCACAAGA+TGG 0.549054 2.1:-48701242 MS.gene85778:CDS
CAATTGTTTAGTGGTTGAAG+TGG 0.559168 2.1:+48701088 None:intergenic
ATTTCCAAGTTTGATAACGT+TGG 0.559993 2.1:-48702901 MS.gene85778:CDS
GTGTTACCATCTCCATCTTG+TGG 0.563148 2.1:+48701230 None:intergenic
ACCTAGCTCGTCCAATAGTG+TGG 0.565589 2.1:+48701351 None:intergenic
CTTAGTGAGTCAAATGGAGA+AGG 0.571397 2.1:+48702931 None:intergenic
CCAAACTTAAATTCAGCTAG+AGG 0.574703 2.1:-48703270 MS.gene85778:CDS
CCCCATCTTAATCATAGCAT+AGG 0.598668 2.1:+48701019 None:intergenic
GTTCAGCTAGGACGCAGAGA+TGG 0.601311 2.1:-48702991 MS.gene85778:CDS
TATGGCTAATATATCAGCAC+AGG 0.604591 2.1:+48703188 None:intergenic
AGATAGAATCAAAAGTGCAG+TGG 0.620562 2.1:-48703235 MS.gene85778:CDS
TTGTGTCCACAAGATGGAGA+TGG 0.623591 2.1:-48701236 MS.gene85778:CDS
CCTAGCTCGTCCAATAGTGT+GGG 0.634190 2.1:+48701352 None:intergenic
AATAAATGAAGAGATTCGAA+TGG 0.634769 2.1:-48704295 MS.gene85778:CDS
CCCACACTATTGGACGAGCT+AGG 0.650505 2.1:-48701352 MS.gene85778:CDS
GCAGTGGAGAGTTCATGTAG+TGG 0.653025 2.1:-48703219 MS.gene85778:CDS
ATTGGTCTCAAACAAAACAC+TGG 0.668930 2.1:-48702968 MS.gene85778:CDS
CCTATGCTATGATTAAGATG+GGG 0.675465 2.1:-48701019 MS.gene85778:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr2.1:48702803-48702822 MS.gene85778:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr2.1:48702822-48702803 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG - chr2.1:48702804-48702823 MS.gene85778:intron 0.0%
!! TATATATATATATATATATA+TGG + chr2.1:48702823-48702804 None:intergenic 0.0%
!!! TATATATATATATATATTTT+TGG - chr2.1:48703074-48703093 MS.gene85778:intron 0.0%
!!! TTTTTTTTATTTTTTAGGTT+CGG + chr2.1:48702639-48702658 None:intergenic 10.0%
!! AAAATGTTGGATAAATAAAA+AGG + chr2.1:48701974-48701993 None:intergenic 15.0%
!! CAAATAATTTATTTGACTAT+AGG + chr2.1:48702495-48702514 None:intergenic 15.0%
!!! ACTTATTTTCATAAACTTTT+TGG - chr2.1:48703738-48703757 MS.gene85778:intron 15.0%
!!! GAATGAAAGAATTTTTTTTA+TGG - chr2.1:48704283-48704302 MS.gene85778:CDS 15.0%
!!! TAGTTTCTTTTTTTTTGTTA+GGG + chr2.1:48703666-48703685 None:intergenic 15.0%
!!! TTAGTTTCTTTTTTTTTGTT+AGG + chr2.1:48703667-48703686 None:intergenic 15.0%
!!! TTTATTTAAATAGTCTTTTG+TGG + chr2.1:48701623-48701642 None:intergenic 15.0%
!!! TTTTATTTATCCAACATTTT+TGG - chr2.1:48701974-48701993 MS.gene85778:intron 15.0%
!! AAGAATTTACTTAATGGAAA+AGG - chr2.1:48704176-48704195 MS.gene85778:intron 20.0%
!! ATTCCAATGCTTATAAAAAA+AGG + chr2.1:48701917-48701936 None:intergenic 20.0%
!! ATTGATCTAATAGTGAAAAT+CGG + chr2.1:48701485-48701504 None:intergenic 20.0%
!! TAACTATTGTAAAAAGATCA+GGG + chr2.1:48700997-48701016 None:intergenic 20.0%
!! TACTTCAAGAATTTACTTAA+TGG - chr2.1:48704170-48704189 MS.gene85778:intron 20.0%
!! TTAGTTTCTATAAGCTATTT+GGG + chr2.1:48703636-48703655 None:intergenic 20.0%
!! TTTCATTCTCACTATAATAT+TGG + chr2.1:48704271-48704290 None:intergenic 20.0%
!!! AAATTTTAAGAGACTATGTT+TGG - chr2.1:48701406-48701425 MS.gene85778:intron 20.0%
!!! AACCTTTTGTGTAAAAATTT+TGG - chr2.1:48703425-48703444 MS.gene85778:intron 20.0%
!!! ATCTGAAAGAATTTTTTCTA+TGG - chr2.1:48701662-48701681 MS.gene85778:intron 20.0%
!!! TACCAAAATTTTTACACAAA+AGG + chr2.1:48703430-48703449 None:intergenic 20.0%
!!! TTGTATAGTTTTATTGAAGT+AGG + chr2.1:48701166-48701185 None:intergenic 20.0%
!!! TTTGTGTAAAAATTTTGGTA+AGG - chr2.1:48703430-48703449 MS.gene85778:intron 20.0%
! AATAAATGAAGAGATTCGAA+TGG - chr2.1:48701036-48701055 MS.gene85778:CDS 25.0%
! ACATAGTCTCTTAAAATTTG+TGG + chr2.1:48701405-48701424 None:intergenic 25.0%
! CAAATATAAAAAAGACAACC+CGG + chr2.1:48703524-48703543 None:intergenic 25.0%
! CAAATTGATCAATTGAGTAT+GGG + chr2.1:48704142-48704161 None:intergenic 25.0%
! CTAACTATTGTAAAAAGATC+AGG + chr2.1:48700998-48701017 None:intergenic 25.0%
! CTACTATTTCCTAAATTTGA+GGG - chr2.1:48701727-48701746 MS.gene85778:intron 25.0%
! CTCATATTACATTAAGACAA+AGG - chr2.1:48703879-48703898 MS.gene85778:intron 25.0%
! CTTAGTTTCTATAAGCTATT+TGG + chr2.1:48703637-48703656 None:intergenic 25.0%
! GGTAAATGAATTGAATTTAG+AGG + chr2.1:48703924-48703943 None:intergenic 25.0%
! TAATTGAACTTGAACATACT+AGG + chr2.1:48702189-48702208 None:intergenic 25.0%
! TAGCATGCATAAATAGAAAT+TGG + chr2.1:48703945-48703964 None:intergenic 25.0%
! TCAAATTGATCAATTGAGTA+TGG + chr2.1:48704143-48704162 None:intergenic 25.0%
! TCATATCTCATTTGATTCAA+TGG + chr2.1:48701516-48701535 None:intergenic 25.0%
! TGCATACAATACATCAAAAA+TGG - chr2.1:48703454-48703473 MS.gene85778:intron 25.0%
! TGTCAAAAAAGTCACATATT+TGG - chr2.1:48702525-48702544 MS.gene85778:intron 25.0%
! TTACATTTACAAAGCAATCA+TGG + chr2.1:48701087-48701106 None:intergenic 25.0%
!! AATGAGTCAGATTAGTTAAA+AGG - chr2.1:48703147-48703166 MS.gene85778:intron 25.0%
!! TAATAGTGAAAATCGGTTTA+TGG + chr2.1:48701478-48701497 None:intergenic 25.0%
!! TATGCATGCTAATTTTCTTT+AGG - chr2.1:48703954-48703973 MS.gene85778:intron 25.0%
!! TCTTTAAGAGAATTGTTAAC+CGG + chr2.1:48702776-48702795 None:intergenic 25.0%
!! TTTTACAATAGTTAGAAGAG+AGG - chr2.1:48701003-48701022 MS.gene85778:CDS 25.0%
!! TTTTAGTCCTTACAAATGAA+GGG + chr2.1:48701767-48701786 None:intergenic 25.0%
!! TTTTATCAAGTCACACATTA+AGG - chr2.1:48702889-48702908 MS.gene85778:CDS 25.0%
!!! AAAAACACCAACTTACTTTT+AGG + chr2.1:48702959-48702978 None:intergenic 25.0%
!!! AATTTTAGTCCCTCAAATTT+AGG + chr2.1:48701739-48701758 None:intergenic 25.0%
!!! ATTTTAGTCCTTACAAATGA+AGG + chr2.1:48701768-48701787 None:intergenic 25.0%
!!! GTTATGTTTTGAACATGAAA+TGG - chr2.1:48703101-48703120 MS.gene85778:intron 25.0%
!!! TAGATTTTTTCTCTGTAAGT+GGG - chr2.1:48703245-48703264 MS.gene85778:CDS 25.0%
!!! TAGCCTTTTTTTATAAGCAT+TGG - chr2.1:48701911-48701930 MS.gene85778:intron 25.0%
!!! TATTTTTGGGAGAGTTTATT+TGG - chr2.1:48703346-48703365 MS.gene85778:intron 25.0%
!!! TCATATTCTAAAGTATTGTC+TGG + chr2.1:48704053-48704072 None:intergenic 25.0%
!!! TGAAAGAATTTTTTCTATGG+AGG - chr2.1:48701665-48701684 MS.gene85778:intron 25.0%
!!! TTTACACAAAAGGTTGTTTT+CGG + chr2.1:48703420-48703439 None:intergenic 25.0%
AACAGATTATTCAACTTCTC+CGG - chr2.1:48704017-48704036 MS.gene85778:intron 30.0%
ACACATTCCTAAAAGTAAGT+TGG - chr2.1:48702949-48702968 MS.gene85778:CDS 30.0%
ACGTTGTCCTGTAAAAATAT+GGG + chr2.1:48700973-48700992 None:intergenic 30.0%
AGATATGATGTGACTTCTAT+TGG - chr2.1:48701528-48701547 MS.gene85778:intron 30.0%
ATAAAAGACACCTTCATGAA+AGG - chr2.1:48703004-48703023 MS.gene85778:CDS 30.0%
ATAACATTAACATCACCCTA+CGG + chr2.1:48701241-48701260 None:intergenic 30.0%
ATAGTACTTAGTGAGTCAAA+TGG + chr2.1:48702409-48702428 None:intergenic 30.0%
ATATTGGACCAATTGTTTAG+TGG + chr2.1:48704255-48704274 None:intergenic 30.0%
ATTTGTAAGAGTTTGATTGG+AGG + chr2.1:48703293-48703312 None:intergenic 30.0%
CATCACTTGAAAAGAGAATT+TGG + chr2.1:48704217-48704236 None:intergenic 30.0%
CTCACCTATACACAATAAAT+TGG + chr2.1:48701439-48701458 None:intergenic 30.0%
GAAGCCAATTTATTGTGTAT+AGG - chr2.1:48701432-48701451 MS.gene85778:intron 30.0%
GCATAGTTAATTAAGTGCTT+AGG + chr2.1:48703824-48703843 None:intergenic 30.0%
GCTACTATTTCCTAAATTTG+AGG - chr2.1:48701726-48701745 MS.gene85778:intron 30.0%
GGGAATATAAATCCACTTAT+TGG - chr2.1:48704332-48704351 MS.gene85778:CDS 30.0%
GGTGCAAAATTTGAGAAAAT+TGG + chr2.1:48701384-48701403 None:intergenic 30.0%
TCAAATCTTATATAGCCGTA+GGG - chr2.1:48701223-48701242 MS.gene85778:CDS 30.0%
TCCCAAAAATATCTTTCAAG+TGG + chr2.1:48703337-48703356 None:intergenic 30.0%
TGATAAAAAACACCACCAAA+GGG + chr2.1:48702877-48702896 None:intergenic 30.0%
TGGATTTGTAAGAGTTTGAT+TGG + chr2.1:48703296-48703315 None:intergenic 30.0%
TTCAAATCTTATATAGCCGT+AGG - chr2.1:48701222-48701241 MS.gene85778:CDS 30.0%
TTGATAAAAAACACCACCAA+AGG + chr2.1:48702878-48702897 None:intergenic 30.0%
TTGTCGTGTGATTAAAAGAT+CGG - chr2.1:48703385-48703404 MS.gene85778:intron 30.0%
! AGTCAGATTAGTTAAAAGGA+CGG - chr2.1:48703151-48703170 MS.gene85778:intron 30.0%
! CCCAAAAATATCTTTCAAGT+GGG + chr2.1:48703336-48703355 None:intergenic 30.0%
! CCCACTTGAAAGATATTTTT+GGG - chr2.1:48703333-48703352 MS.gene85778:intron 30.0%
! GTGATCATATTTTGTAGAGT+GGG - chr2.1:48702302-48702321 MS.gene85778:intron 30.0%
! TCCCACTTGAAAGATATTTT+TGG - chr2.1:48703332-48703351 MS.gene85778:intron 30.0%
! TGATCATATTTTGTAGAGTG+GGG - chr2.1:48702303-48702322 MS.gene85778:intron 30.0%
! TGTGATCATATTTTGTAGAG+TGG - chr2.1:48702301-48702320 MS.gene85778:intron 30.0%
!! AAAGACGTTGTTACTTTATC+AGG - chr2.1:48702463-48702482 MS.gene85778:intron 30.0%
!! ATTTCCAAGTTTGATAACGT+TGG - chr2.1:48702430-48702449 MS.gene85778:intron 30.0%
!! TTACACAAAAGGTTGTTTTC+GGG + chr2.1:48703419-48703438 None:intergenic 30.0%
!!! AGATTTTTTCTCTGTAAGTG+GGG - chr2.1:48703246-48703265 MS.gene85778:CDS 30.0%
!!! CGGGTTGTCTTTTTTATATT+TGG - chr2.1:48703522-48703541 MS.gene85778:intron 30.0%
!!! GTAGATTTTTTCTCTGTAAG+TGG - chr2.1:48703244-48703263 MS.gene85778:CDS 30.0%
AACAGAATCTCTAGCAACTA+TGG + chr2.1:48702164-48702183 None:intergenic 35.0%
AAGACCAACGTTATCAAACT+TGG + chr2.1:48702437-48702456 None:intergenic 35.0%
ACATTGACACAAGAAACGTT+TGG + chr2.1:48703849-48703868 None:intergenic 35.0%
ATAGAAGACACCTTTCATGA+AGG + chr2.1:48703017-48703036 None:intergenic 35.0%
CAATTGTTTAGTGGTTGAAG+TGG + chr2.1:48704246-48704265 None:intergenic 35.0%
CACGTTGTCCTGTAAAAATA+TGG + chr2.1:48700974-48700993 None:intergenic 35.0%
CACTTCAACCACTAAACAAT+TGG - chr2.1:48704244-48704263 MS.gene85778:intron 35.0%
CCAAACTTAAATTCAGCTAG+AGG - chr2.1:48702061-48702080 MS.gene85778:intron 35.0%
CCTATGCTATGATTAAGATG+GGG - chr2.1:48704312-48704331 MS.gene85778:CDS 35.0%
CGTTGTCCTGTAAAAATATG+GGG + chr2.1:48700972-48700991 None:intergenic 35.0%
GCCTATGCTATGATTAAGAT+GGG - chr2.1:48704311-48704330 MS.gene85778:CDS 35.0%
GTGAAAAACACGCTTATGTA+TGG - chr2.1:48701550-48701569 MS.gene85778:intron 35.0%
TAAAAATATGGGGTCAATCG+AGG + chr2.1:48700962-48700981 None:intergenic 35.0%
TAAGAGTTTGATTGGAGGAT+GGG + chr2.1:48703288-48703307 None:intergenic 35.0%
TATGGCTAATATATCAGCAC+AGG + chr2.1:48702146-48702165 None:intergenic 35.0%
TGCCTATGCTATGATTAAGA+TGG - chr2.1:48704310-48704329 MS.gene85778:CDS 35.0%
TTACCAACCCTTCATTTGTA+AGG - chr2.1:48701757-48701776 MS.gene85778:intron 35.0%
TTTCCTTAACTAGTGTTCAG+TGG - chr2.1:48702747-48702766 MS.gene85778:intron 35.0%
! AGATAGAATCAAAAGTGCAG+TGG - chr2.1:48702096-48702115 MS.gene85778:intron 35.0%
! ATGGTAATGTATTTGAGCTG+AGG - chr2.1:48703120-48703139 MS.gene85778:intron 35.0%
! ATTGGTCTCAAACAAAACAC+TGG - chr2.1:48702363-48702382 MS.gene85778:intron 35.0%
! CCTCTAGCTGAATTTAAGTT+TGG + chr2.1:48702064-48702083 None:intergenic 35.0%
! GATCATATTTTGTAGAGTGG+GGG - chr2.1:48702304-48702323 MS.gene85778:intron 35.0%
! GTCAGATTAGTTAAAAGGAC+GGG - chr2.1:48703152-48703171 MS.gene85778:intron 35.0%
! TGGTAATGTATTTGAGCTGA+GGG - chr2.1:48703121-48703140 MS.gene85778:intron 35.0%
! TTTTCTTAACTAGTGCTTCG+AGG + chr2.1:48702590-48702609 None:intergenic 35.0%
!! AAATCCACTTATTGGTTCTG+AGG - chr2.1:48704340-48704359 MS.gene85778:CDS 35.0%
!! AATCCACTTATTGGTTCTGA+GGG - chr2.1:48704341-48704360 MS.gene85778:CDS 35.0%
!! GATTGACCCCATATTTTTAC+AGG - chr2.1:48700963-48700982 MS.gene85778:CDS 35.0%
AAGAGTTTGATTGGAGGATG+GGG + chr2.1:48703287-48703306 None:intergenic 40.0%
AGAGAATTTGGTCAGAGCTA+AGG + chr2.1:48704205-48704224 None:intergenic 40.0%
AGTCCTTACAAATGAAGGGT+TGG + chr2.1:48701763-48701782 None:intergenic 40.0%
CAAAACTTGTGTCCACAAGA+TGG - chr2.1:48704089-48704108 MS.gene85778:intron 40.0%
CCCCATCTTAATCATAGCAT+AGG + chr2.1:48704315-48704334 None:intergenic 40.0%
CTTAGTGAGTCAAATGGAGA+AGG + chr2.1:48702403-48702422 None:intergenic 40.0%
GGTAATGTATTTGAGCTGAG+GGG - chr2.1:48703122-48703141 MS.gene85778:intron 40.0%
GTAAGAGTTTGATTGGAGGA+TGG + chr2.1:48703289-48703308 None:intergenic 40.0%
TAAAAAACACCACCAAAGGG+TGG + chr2.1:48702874-48702893 None:intergenic 40.0%
TGTCCACTGAACACTAGTTA+AGG + chr2.1:48702753-48702772 None:intergenic 40.0%
TTATGTTACAAGCCACCCTT+TGG - chr2.1:48702859-48702878 MS.gene85778:intron 40.0%
! ATATCTTTCAAGTGGGAGCT+TGG + chr2.1:48703329-48703348 None:intergenic 40.0%
! ATGCGGGAGCTTTAATATAC+CGG - chr2.1:48703502-48703521 MS.gene85778:intron 40.0%
!! ATTGTCTGGTTCTTGTGTTC+CGG + chr2.1:48704039-48704058 None:intergenic 40.0%
!!! ATCCAACATTTTTGGCTCTC+AGG - chr2.1:48701982-48702001 MS.gene85778:intron 40.0%
!!! TCCAACATTTTTGGCTCTCA+GGG - chr2.1:48701983-48702002 MS.gene85778:intron 40.0%
AACTAGTGTTCAGTGGACAC+CGG - chr2.1:48702754-48702773 MS.gene85778:intron 45.0%
ACCCTGAGAGCCAAAAATGT+TGG + chr2.1:48701987-48702006 None:intergenic 45.0%
ATTAAAGCTCCCGCATACGT+AGG + chr2.1:48703498-48703517 None:intergenic 45.0%
CCTAGCTGAACGTACCAAAA+AGG + chr2.1:48702331-48702350 None:intergenic 45.0%
GATGGTTCAGTTCTGCTTGA+TGG - chr2.1:48702010-48702029 MS.gene85778:intron 45.0%
GTGTTACCATCTCCATCTTG+TGG + chr2.1:48704104-48704123 None:intergenic 45.0%
TCAGTTCTGCTTGATGGAGA+CGG - chr2.1:48702016-48702035 MS.gene85778:intron 45.0%
TCTCCCTCAGAACCAATAAG+TGG + chr2.1:48704347-48704366 None:intergenic 45.0%
TCTCTGTAAGTGGGGTGAAA+GGG - chr2.1:48703254-48703273 MS.gene85778:CDS 45.0%
TCTTTAGGTGCCCACACTAT+TGG - chr2.1:48703969-48703988 MS.gene85778:intron 45.0%
TTAAAGCTCCCGCATACGTA+GGG + chr2.1:48703497-48703516 None:intergenic 45.0%
TTCTCTGTAAGTGGGGTGAA+AGG - chr2.1:48703253-48703272 MS.gene85778:CDS 45.0%
TTGTGTCCACAAGATGGAGA+TGG - chr2.1:48704095-48704114 MS.gene85778:intron 45.0%
! TGCGGGAGCTTTAATATACC+GGG - chr2.1:48703503-48703522 MS.gene85778:intron 45.0%
!! CCTTTTTGGTACGTTCAGCT+AGG - chr2.1:48702328-48702347 MS.gene85778:intron 45.0%
!! TTGGTTCTGAGGGAGAGATT+AGG - chr2.1:48704351-48704370 MS.gene85778:CDS 45.0%
!!! AGAATTTTTTTTTATTTTTT+AGG + chr2.1:48702644-48702663 None:intergenic 5.0%
ACCTAGCTCGTCCAATAGTG+TGG + chr2.1:48703983-48704002 None:intergenic 50.0%
CCTAGCTCGTCCAATAGTGT+GGG + chr2.1:48703982-48704001 None:intergenic 50.0%
CTTCCCAAACCCTACGTATG+CGG - chr2.1:48703485-48703504 MS.gene85778:intron 50.0%
GCAGTGGAGAGTTCATGTAG+TGG - chr2.1:48702112-48702131 MS.gene85778:intron 50.0%
TGTTACAAGCCACCCTTTGG+TGG - chr2.1:48702862-48702881 MS.gene85778:intron 50.0%
TTCCCAAACCCTACGTATGC+GGG - chr2.1:48703486-48703505 MS.gene85778:intron 50.0%
! TCTTTCAAGTGGGAGCTTGG+TGG + chr2.1:48703326-48703345 None:intergenic 50.0%
! TGTAGAGTGGGGGTCCTTTT+TGG - chr2.1:48702314-48702333 MS.gene85778:intron 50.0%
!! TTTGGCTCTCAGGGTTGTGA+TGG - chr2.1:48701992-48702011 MS.gene85778:intron 50.0%
CCCACACTATTGGACGAGCT+AGG - chr2.1:48703979-48703998 MS.gene85778:intron 55.0%
CTCCCGCATACGTAGGGTTT+GGG + chr2.1:48703491-48703510 None:intergenic 55.0%
GCTAGGACGCAGAGATGGAT+TGG - chr2.1:48702345-48702364 MS.gene85778:intron 55.0%
GTTCAGCTAGGACGCAGAGA+TGG - chr2.1:48702340-48702359 MS.gene85778:intron 55.0%
GCTCCCGCATACGTAGGGTT+TGG + chr2.1:48703492-48703511 None:intergenic 60.0%
!! GGGAGCTTGGTGGTGAGCTA+TGG + chr2.1:48703316-48703335 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 48700953 48704400 48700953 ID=MS.gene85778
chr2.1 mRNA 48700953 48704400 48700953 ID=MS.gene85778.t1;Parent=MS.gene85778
chr2.1 exon 48704251 48704400 48704251 ID=MS.gene85778.t1.exon1;Parent=MS.gene85778.t1
chr2.1 CDS 48704251 48704400 48704251 ID=cds.MS.gene85778.t1;Parent=MS.gene85778.t1
chr2.1 exon 48703164 48703349 48703164 ID=MS.gene85778.t1.exon2;Parent=MS.gene85778.t1
chr2.1 CDS 48703164 48703349 48703164 ID=cds.MS.gene85778.t1;Parent=MS.gene85778.t1
chr2.1 exon 48702869 48703034 48702869 ID=MS.gene85778.t1.exon3;Parent=MS.gene85778.t1
chr2.1 CDS 48702869 48703034 48702869 ID=cds.MS.gene85778.t1;Parent=MS.gene85778.t1
chr2.1 exon 48700953 48701377 48700953 ID=MS.gene85778.t1.exon4;Parent=MS.gene85778.t1
chr2.1 CDS 48700953 48701377 48700953 ID=cds.MS.gene85778.t1;Parent=MS.gene85778.t1
Gene Sequence

>MS.gene85778

ATGAGACCTCGATTGACCCCATATTTTTACAGGACAACGTGCCCTGATCTTTTTACAATAGTTAGAAGAGAGGTTCTTAATGCAATAAATGAAGAGATTCGAATGGCTGCTTCTTTGCTTCGTCTTCACTTCCATGATTGCTTTGTAAATGTAAGTAAGTTAGAGCTAATAGTAGATTATTTTTACTTCTCATATAACATTATATACTTACCTACTTCAATAAAACTATACAATAATATTAAAACTATATTTTTTTTAATACATACATATTCAAATCTTATATAGCCGTAGGGTGATGTTAATGTTATTACGAGTAAATAGATTTTAGTTATTGAAATTGTAAAAGTTGATAAATTTGAGAAATAGAAAGAAAAAAATTTGACTTAGTAAAAAAAAAAAAAAGAATTTATTTTTTTACAAAATATCAACCAATTTTCTCAAATTTTGCACCACAAATTTTAAGAGACTATGTTTGGTTTGAAGCCAATTTATTGTGTATAGGTGAGATAAGTCTTGCATCGTCCATAAACCGATTTTCACTATTAGATCAATAAATATCACCATTGAATCAAATGAGATATGATGTGACTTCTATTGGTGAAAAACACGCTTATGTATGGTACAAGAGTATTTTATTCACGCACATTAGACAAAACATGTTTTGATGCCACAAAAGACTATTTAAATAAATATGTATGTCGTTTATTTGATCTGAAAGAATTTTTTCTATGGAGGAACTAAATTGATTGATATTTTTCTGTTTTAGATACTAAGCTACTATTTCCTAAATTTGAGGGACTAAAATTACCAACCCTTCATTTGTAAGGACTAAAATGTCTACTTATACACTTTTTTTTTTTACAAAATTTATTTATACTTTATTATGATAATATTAATTTTTAAAATATTTATGTAAATATCTAATTAGATGTCTCTGTAGAACATTTTTATTGAAACATAGCCTTTTTTTATAAGCATTGGAATATAGTATTAAATTTCTAATATCTTCTTTATTTTACCTTTTTATTTATCCAACATTTTTGGCTCTCAGGGTTGTGATGGTTCAGTTCTGCTTGATGGAGACGGAGATATTGAGAAATTTGCAACTCCAAACTTAAATTCAGCTAGAGGATTTGAAGTCATAGATAGAATCAAAAGTGCAGTGGAGAGTTCATGTAGTGGAGTTGTGTCCTGTGCTGATATATTAGCCATAGTTGCTAGAGATTCTGTTCACCTAGTATGTTCAAGTTCAATTATTAAATATTCATAACTAATCATGCAAATATTAAAACAAATCTCTCTTTTAATTAGCAAATAATTTTCTAAATTTGTGTTTAGCTTAATTAATTGTGATCATATTTTGTAGAGTGGGGGTCCTTTTTGGTACGTTCAGCTAGGACGCAGAGATGGATTGGTCTCAAACAAAACACTGGCAAATAATGCAATTCCTTCTCCATTTGACTCACTAAGTACTATCATTTCCAAGTTTGATAACGTTGGTCTTAGTGTTAAAGACGTTGTTACTTTATCAGGTATAGTCCTATAGTCAAATAAATTATTTGAAATCTCATTTGTCAAAAAAGTCACATATTTGGTCTTTTGTTATTTAAAGAAAAAGTCATACTAACTCGTGTCCTCGAAGCACTAGTTAAGAAAAGTTAAAAGTAAAAATTTCTCATTAATCCGAACCTAAAAAATAAAAAAAAATTCTCATTAAAAACAACAAATTCTTGACATTCAAAAAGTTAAATACACAATTTTAACTCATTTTTCAATATGATATTTCTATATTGATTTCCTTAACTAGTGTTCAGTGGACACCGGTTAACAATTCTCTTAAAGAAATTCAGATATATATATATATATATATATATATATATATATATATATATATATATATATAGGGTTATGTTACAAGCCACCCTTTGGTGGTGTTTTTTATCAAGTCACACATTAAGGTGTGATTTTCACTTTTTAGTTATAACTTTGATAAAAGACACATTCCTAAAAGTAAGTTGGTGTTTTTTCGCAAATGCTCATAGAGTAACTTGATAAAAGACACCTTCATGAAAGGTGTCTTCTATCATAACCCATATATATATATATATATATATATATATATATATATATATATATATTTTTGGAAGAGTTATGTTTTGAACATGAAATGGTAATGTATTTGAGCTGAGGGGTGAATGAGTCAGATTAGTTAAAAGGACGGGTTTAAACTCTAATGCAGAAGAAATATTAACATAACAATAACTTTATTGACATTTGTTGATAAAAAATTAGTAGATTTTTTCTCTGTAAGTGGGGTGAAAGGGATCAAAGCCCCATCCTCCAATCAAACTCTTACAAATCCATAGCTCACCACCAAGCTCCCACTTGAAAGATATTTTTGGGAGAGTTTATTTGGTACAACAGTAAAGTTGTTGTCGTGTGATTAAAAGATCGGATTTAAGTCCCGAAAACAACCTTTTGTGTAAAAATTTTGGTAAGGTTGCATACAATACATCAAAAATGGTGAAATCTCTTCCCAAACCCTACGTATGCGGGAGCTTTAATATACCGGGTTGTCTTTTTTATATTTGGACTTATCTTGCATGCGTGTTTAAAAGTGTTTATAAAAATCATTTGAGTTACTACATGTCTATAAATTGTTCTTATTTTCATAAACTTTCCCAAATAGCTTATAGAAACTAAGAATATTCCCTAACAAAAAAAAAGAAACTAAGAATATGACATATTTTAGTTTGAGTTGTAAGATATCTATGAAGTATTTGTAACTTATTTTCATAAACTTTTTGGAATAACTTATAGAAATAGATCTTATGCGAAGTTTTTTTGTCATTTACTCTTCAATTGTTGCCTAAGCACTTAATTAACTATGCAGCCAAACGTTTCTTGTGTCAATGTATCATTTTTGCTCATATTACATTAAGACAAAGGAAATTTCTTGCTTACTTTTCCTCTAAATTCAATTCATTTACCAATTTCTATTTATGCATGCTAATTTTCTTTAGGTGCCCACACTATTGGACGAGCTAGGTGCACATTTTTTAGCAACAGATTATTCAACTTCTCCGGAACACAAGAACCAGACAATACTTTAGAATATGAAATGCTAACTCAATTGCAAAACTTGTGTCCACAAGATGGAGATGGTAACACAACTACTGTTCTAGACCCATACTCAATTGATCAATTTGATAACAATTACTTCAAGAATTTACTTAATGGAAAAGGTCTCCTTAGCTCTGACCAAATTCTCTTTTCAAGTGATGAAGAAACCACTTCAACCACTAAACAATTGGTCCAATATTATAGTGAGAATGAAAGAATTTTTTTTATGGAATTTGCCTATGCTATGATTAAGATGGGGAATATAAATCCACTTATTGGTTCTGAGGGAGAGATTAGGAAGAGCTGTAGAGTGATTAATTCTTAA
Protein sequence

>MS.gene85778.t1

MRPRLTPYFYRTTCPDLFTIVRREVLNAINEEIRMAASLLRLHFHDCFVNGCDGSVLLDGDGDIEKFATPNLNSARGFEVIDRIKSAVESSCSGVVSCADILAIVARDSVHLSGGPFWYVQLGRRDGLVSNKTLANNAIPSPFDSLSTIISKFDNVGLSVKDVVTLSGAHTIGRARCTFFSNRLFNFSGTQEPDNTLEYEMLTQLQNLCPQDGDGNTTTVLDPYSIDQFDNNYFKNLLNGKGLLSSDQILFSSDEETTSTTKQLVQYYSENERIFFMEFAYAMIKMGNINPLIGSEGEIRKSCRVINS