AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026111

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026111.t1 MTR_2g040000 95.779 308 13 0 1 308 25 332 0.0 615
MS.gene026111.t1 MTR_4g125940 70.779 308 89 1 1 308 24 330 2.03e-159 447
MS.gene026111.t1 MTR_4g125940 73.551 276 72 1 33 308 1 275 6.44e-147 414
MS.gene026111.t1 MTR_1g054205 56.352 307 128 2 4 307 23 326 1.35e-122 354
MS.gene026111.t1 MTR_7g093370 56.352 307 128 2 4 307 68 371 3.99e-121 352
MS.gene026111.t1 MTR_5g021060 53.770 305 135 2 5 307 30 330 5.96e-110 322
MS.gene026111.t1 MTR_8g076820 52.903 310 140 2 1 308 26 331 2.21e-109 321
MS.gene026111.t1 MTR_2g028980 52.614 306 140 2 4 307 28 330 5.40e-106 313
MS.gene026111.t1 MTR_2g029815 50.814 307 146 2 4 308 28 331 1.29e-105 312
MS.gene026111.t1 MTR_2g029800 51.140 307 145 2 4 308 28 331 1.15e-104 310
MS.gene026111.t1 MTR_5g083860 53.094 307 128 5 5 307 31 325 9.46e-104 306
MS.gene026111.t1 MTR_2g084110 51.634 306 134 4 4 307 24 317 1.82e-103 305
MS.gene026111.t1 MTR_5g017860 51.987 302 136 4 9 307 31 326 1.94e-103 305
MS.gene026111.t1 MTR_3g072190 51.299 308 136 3 2 307 23 318 1.22e-102 303
MS.gene026111.t1 MTR_3g094650 52.273 308 131 5 4 307 27 322 1.35e-102 303
MS.gene026111.t1 MTR_2g084010 51.307 306 136 3 4 307 24 318 1.51e-102 303
MS.gene026111.t1 MTR_5g017850 51.656 302 137 4 9 307 31 326 1.75e-102 303
MS.gene026111.t1 MTR_2g029830 50.163 307 148 2 4 308 27 330 4.59e-102 303
MS.gene026111.t1 MTR_2g029820 49.186 307 151 2 4 308 28 331 1.91e-101 301
MS.gene026111.t1 MTR_2g084080 50.000 306 139 3 4 307 24 317 3.59e-101 300
MS.gene026111.t1 MTR_2g029560 49.837 307 149 2 4 308 23 326 3.77e-101 300
MS.gene026111.t1 MTR_3g466200 51.935 310 130 6 4 307 24 320 4.09e-101 299
MS.gene026111.t1 MTR_2g084020 50.654 306 138 3 4 307 24 318 3.35e-100 297
MS.gene026111.t1 MTR_5g074970 52.258 310 130 5 4 307 29 326 1.73e-99 295
MS.gene026111.t1 MTR_2g029860 49.020 306 151 2 4 307 28 330 1.18e-98 294
MS.gene026111.t1 MTR_7g072510 48.220 309 146 3 1 307 16 312 2.22e-98 292
MS.gene026111.t1 MTR_2g029730 49.673 306 149 2 4 307 24 326 5.18e-98 292
MS.gene026111.t1 MTR_4g083710 48.867 309 143 4 4 307 26 324 5.34e-98 291
MS.gene026111.t1 MTR_4g029170 49.837 307 138 5 5 307 27 321 6.95e-98 291
MS.gene026111.t1 MTR_2g029750 49.346 306 150 2 4 307 28 330 1.63e-97 291
MS.gene026111.t1 MTR_2g084000 47.249 309 150 3 1 307 22 319 2.06e-97 290
MS.gene026111.t1 MTR_2g029740 48.693 306 152 2 4 307 28 330 3.26e-97 291
MS.gene026111.t1 MTR_3g094670 53.247 308 128 5 4 307 27 322 7.96e-97 288
MS.gene026111.t1 MTR_4g029180 49.835 303 136 5 9 307 31 321 5.71e-96 286
MS.gene026111.t1 MTR_3g094630 53.571 308 127 5 4 307 27 322 1.26e-95 285
MS.gene026111.t1 MTR_5g014100 50.323 310 143 5 5 307 26 331 1.43e-95 286
MS.gene026111.t1 MTR_2g029850 49.502 301 147 2 9 307 33 330 1.49e-95 286
MS.gene026111.t1 MTR_4g122640 48.505 301 147 3 9 307 42 336 1.52e-95 286
MS.gene026111.t1 MTR_7g072480 49.673 306 140 4 4 307 23 316 1.10e-94 283
MS.gene026111.t1 MTR_4g030890 48.197 305 148 4 5 307 100 396 1.95e-93 283
MS.gene026111.t1 MTR_5g074860 49.511 307 139 6 5 306 29 324 2.03e-93 280
MS.gene026111.t1 MTR_4g031140 46.405 306 154 4 5 308 28 325 4.47e-93 280
MS.gene026111.t1 MTR_4g029200 47.213 305 147 3 5 307 46 338 7.24e-93 279
MS.gene026111.t1 MTR_5g074760 49.191 309 141 7 4 307 24 321 1.89e-92 277
MS.gene026111.t1 MTR_2g084090 48.052 308 143 5 4 307 24 318 1.89e-92 277
MS.gene026111.t1 MTR_4g074995 48.397 312 127 6 4 307 23 308 2.53e-92 276
MS.gene026111.t1 MTR_1g022970 48.197 305 153 2 5 307 46 347 7.92e-91 274
MS.gene026111.t1 MTR_5g074740 48.867 309 142 7 4 307 24 321 1.33e-90 273
MS.gene026111.t1 MTR_3g466180 49.346 306 141 3 4 307 30 323 5.57e-90 271
MS.gene026111.t1 MTR_4g046713 46.906 307 154 5 4 307 26 326 3.06e-89 270
MS.gene026111.t1 MTR_5g049280 45.338 311 164 4 2 308 30 338 1.01e-88 268
MS.gene026111.t1 MTR_2g029910 45.779 308 161 3 4 308 29 333 1.15e-88 269
MS.gene026111.t1 MTR_2g008710 47.525 303 147 5 9 307 31 325 1.26e-88 268
MS.gene026111.t1 MTR_5g074710 47.573 309 146 7 4 307 24 321 2.97e-88 267
MS.gene026111.t1 MTR_2g088770 47.855 303 149 5 9 308 30 326 1.58e-87 265
MS.gene026111.t1 MTR_4g114210 47.249 309 150 5 4 307 20 320 2.00e-87 265
MS.gene026111.t1 MTR_4g074990 44.337 309 141 4 4 307 23 305 1.36e-84 257
MS.gene026111.t1 MTR_3g467600 45.955 309 152 6 4 307 26 324 1.88e-84 257
MS.gene026111.t1 MTR_2g029830 50.000 260 125 2 51 308 6 262 3.76e-83 253
MS.gene026111.t1 MTR_1g115900 45.955 309 149 7 5 308 27 322 4.06e-83 254
MS.gene026111.t1 MTR_4g029190 45.098 306 155 5 5 307 45 340 4.49e-83 254
MS.gene026111.t1 MTR_5g022870 45.364 302 150 8 9 307 27 316 5.87e-82 250
MS.gene026111.t1 MTR_7g026990 45.364 302 150 5 9 308 35 323 1.24e-81 250
MS.gene026111.t1 MTR_0155s0040 44.918 305 150 8 5 307 27 315 7.13e-81 248
MS.gene026111.t1 MTR_1g101830 42.718 309 164 6 2 307 24 322 3.32e-80 246
MS.gene026111.t1 MTR_4g074980 44.444 306 133 5 4 307 24 294 6.15e-79 242
MS.gene026111.t1 MTR_3g072190 49.618 262 118 3 48 307 2 251 9.94e-79 240
MS.gene026111.t1 MTR_7g107520 44.371 302 155 6 9 307 29 320 5.00e-78 241
MS.gene026111.t1 MTR_1g086320 45.246 305 156 5 9 307 34 333 1.74e-77 239
MS.gene026111.t1 MTR_7g029030 42.484 306 165 5 4 307 24 320 1.73e-76 236
MS.gene026111.t1 MTR_8g075100 43.709 302 155 8 9 307 30 319 2.37e-76 236
MS.gene026111.t1 MTR_3g092990 42.574 303 166 3 9 308 30 327 1.30e-75 234
MS.gene026111.t1 MTR_1g086490 43.590 312 158 5 9 307 34 340 2.56e-74 232
MS.gene026111.t1 MTR_1g090760 41.447 304 168 4 9 307 32 330 3.11e-74 231
MS.gene026111.t1 MTR_4g133800 41.333 300 162 6 10 307 46 333 1.44e-73 229
MS.gene026111.t1 MTR_1g009750 40.924 303 170 4 9 307 31 328 2.64e-73 229
MS.gene026111.t1 MTR_2g067440 38.671 331 167 6 9 308 64 389 4.26e-73 230
MS.gene026111.t1 MTR_1g025980 42.951 305 160 7 5 306 24 317 7.32e-73 227
MS.gene026111.t1 MTR_6g043280 42.053 302 160 6 9 308 45 333 7.48e-73 228
MS.gene026111.t1 MTR_5g016010 38.961 308 178 4 4 306 26 328 1.50e-72 227
MS.gene026111.t1 MTR_7g086820 40.333 300 167 6 9 307 24 312 6.15e-72 225
MS.gene026111.t1 MTR_5g074860 42.671 307 121 6 5 306 29 285 1.06e-71 223
MS.gene026111.t1 MTR_1g077000 43.189 301 153 8 9 307 43 327 1.54e-71 224
MS.gene026111.t1 MTR_2g078610 38.024 334 168 6 9 308 80 408 1.61e-71 227
MS.gene026111.t1 MTR_4g127670 40.728 302 172 2 4 303 23 319 2.43e-71 223
MS.gene026111.t1 MTR_2g437770 41.196 301 164 6 9 308 54 342 9.91e-71 223
MS.gene026111.t1 MTR_4g074980 47.881 236 112 3 4 234 24 253 1.18e-70 219
MS.gene026111.t1 MTR_2g077990 37.725 334 169 6 9 308 80 408 4.01e-70 223
MS.gene026111.t1 MTR_1g038680 42.623 305 164 6 9 307 33 332 2.26e-69 219
MS.gene026111.t1 MTR_8g062780 41.158 311 174 5 2 308 20 325 2.74e-69 218
MS.gene026111.t1 MTR_2g008730 41.584 303 141 5 9 307 31 301 1.08e-68 216
MS.gene026111.t1 MTR_2g099175 38.264 311 179 5 2 307 33 335 1.34e-68 217
MS.gene026111.t1 MTR_2g008160 41.914 303 165 6 9 307 28 323 1.52e-68 216
MS.gene026111.t1 MTR_4g095450 39.806 309 169 6 4 306 26 323 3.17e-68 216
MS.gene026111.t1 MTR_7g086870 39.404 302 166 6 9 308 26 312 3.58e-68 215
MS.gene026111.t1 MTR_6g043240 40.667 300 163 6 9 307 46 331 9.12e-68 215
MS.gene026111.t1 MTR_6g027440 40.532 301 166 6 9 307 25 314 8.38e-67 212
MS.gene026111.t1 MTR_2g078280 37.855 317 159 5 9 292 80 391 2.69e-66 213
MS.gene026111.t1 MTR_4g087965 38.614 303 172 5 9 303 46 342 3.39e-64 206
MS.gene026111.t1 MTR_3g092990 40.264 303 162 4 9 308 30 316 5.36e-64 204
MS.gene026111.t1 MTR_1g009750 38.206 301 164 5 9 307 31 311 1.19e-62 201
MS.gene026111.t1 MTR_2g067450 38.339 313 165 8 9 308 15 312 7.74e-62 199
MS.gene026111.t1 MTR_6g043460 38.926 298 166 7 9 303 40 324 8.18e-60 195
MS.gene026111.t1 MTR_0147s0010 36.164 318 166 5 9 306 81 381 2.12e-57 189
MS.gene026111.t1 MTR_1g066710 36.184 304 180 7 9 308 31 324 1.02e-56 186
MS.gene026111.t1 MTR_2g008160 36.774 310 150 6 2 307 21 288 3.72e-55 181
MS.gene026111.t1 MTR_4g132490 34.202 307 192 5 4 307 28 327 1.13e-54 181
MS.gene026111.t1 MTR_3g105790 36.513 304 178 6 9 307 29 322 2.32e-54 180
MS.gene026111.t1 MTR_0286s0010 37.097 310 181 7 4 307 33 334 3.91e-54 179
MS.gene026111.t1 MTR_6g008075 37.097 310 181 7 4 307 33 334 3.91e-54 179
MS.gene026111.t1 MTR_5g033470 35.161 310 181 8 9 307 77 377 2.08e-53 179
MS.gene026111.t1 MTR_5g074700 41.423 239 112 7 72 307 1 214 3.77e-53 173
MS.gene026111.t1 MTR_1g066640 35.048 311 174 7 9 308 31 324 5.26e-53 176
MS.gene026111.t1 MTR_4g132110 34.084 311 177 6 9 308 36 329 7.16e-52 174
MS.gene026111.t1 MTR_1g066680 35.197 304 182 5 9 308 31 323 1.59e-51 172
MS.gene026111.t1 MTR_1g066380 33.762 311 178 7 9 308 31 324 2.61e-50 169
MS.gene026111.t1 MTR_4g132110 33.544 316 177 7 9 308 36 334 9.55e-50 168
MS.gene026111.t1 MTR_3g072210 46.154 195 93 3 114 307 55 238 5.27e-48 160
MS.gene026111.t1 MTR_2g008160 49.390 164 81 2 9 172 28 189 3.21e-46 155
MS.gene026111.t1 MTR_2g029880 41.237 194 101 2 115 308 9 189 3.92e-42 145
MS.gene026111.t1 MTR_1g066380 33.579 271 152 7 49 308 3 256 2.03e-40 142
MS.gene026111.t1 MTR_3g105790 37.037 243 140 5 70 307 12 246 7.42e-40 140
MS.gene026111.t1 MTR_3g072260 60.550 109 41 1 4 110 25 133 3.88e-38 132
MS.gene026111.t1 MTR_7g072490 39.683 252 84 6 51 300 2 187 6.93e-38 134
MS.gene026111.t1 MTR_2g077980 30.526 285 156 8 61 308 7 286 2.61e-33 124
MS.gene026111.t1 MTR_2g078560 30.531 226 123 3 108 303 95 316 6.93e-33 124
MS.gene026111.t1 MTR_4g031040 33.333 174 68 4 65 236 4 131 2.25e-22 90.9
MS.gene026111.t1 MTR_5g058120 34.545 165 92 3 139 303 7 155 8.62e-22 92.4
MS.gene026111.t1 MTR_3g462850 35.811 148 91 3 163 308 5 150 3.68e-21 88.2
MS.gene026111.t1 MTR_4g114220 50.562 89 36 2 24 112 22 102 4.30e-21 87.8
MS.gene026111.t1 MTR_6g048160 62.319 69 24 2 44 112 22 88 7.73e-21 85.5
MS.gene026111.t1 MTR_7g086790 33.333 189 102 6 52 238 17 183 2.54e-19 84.3
MS.gene026111.t1 MTR_1g089005 37.956 137 72 4 9 137 19 150 3.96e-17 77.4
MS.gene026111.t1 MTR_1g098320 43.373 83 42 1 225 307 47 124 1.96e-15 72.4
MS.gene026111.t1 MTR_5g074770 39.362 94 52 2 213 306 20 108 1.18e-14 69.3
MS.gene026111.t1 MTR_7g107500 43.478 92 44 3 217 307 13 97 1.07e-13 66.2
MS.gene026111.t1 MTR_2g029930 40.404 99 29 4 4 86 18 102 2.01e-13 65.9
MS.gene026111.t1 MTR_7g086810 32.407 108 49 1 9 116 10 93 7.92e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026111.t1 AT5G19890 62.215 307 111 4 1 307 26 327 1.50e-135 387
MS.gene026111.t1 AT5G06720 55.882 306 130 2 4 307 31 333 8.10e-120 347
MS.gene026111.t1 AT5G06730 54.248 306 135 2 4 307 32 334 2.67e-116 339
MS.gene026111.t1 AT4G36430 54.072 307 135 2 4 308 29 331 3.23e-116 338
MS.gene026111.t1 AT2G18150 53.770 305 135 2 5 307 36 336 1.19e-113 332
MS.gene026111.t1 AT2G18140 52.787 305 138 2 5 307 35 335 5.26e-110 323
MS.gene026111.t1 AT5G66390 51.803 305 141 2 5 307 33 333 2.77e-107 316
MS.gene026111.t1 AT2G38390 50.489 307 146 3 4 307 30 333 5.25e-106 313
MS.gene026111.t1 AT3G50990 51.475 305 142 2 5 307 41 341 1.56e-105 311
MS.gene026111.t1 AT5G05340 52.597 308 128 5 1 303 26 320 8.54e-105 309
MS.gene026111.t1 AT2G38380 51.140 307 144 3 4 307 30 333 6.83e-104 308
MS.gene026111.t1 AT3G32980 50.325 308 148 3 4 308 30 335 1.96e-101 301
MS.gene026111.t1 AT1G49570 52.333 300 133 4 9 303 52 346 2.04e-100 299
MS.gene026111.t1 AT5G19880 52.427 309 139 4 4 307 24 329 2.33e-99 295
MS.gene026111.t1 AT4G08770 49.026 308 152 3 4 308 23 328 2.24e-98 293
MS.gene026111.t1 AT1G44970 51.803 305 142 2 5 307 45 346 4.86e-98 293
MS.gene026111.t1 AT4G16270 51.495 301 138 3 9 307 54 348 1.85e-97 291
MS.gene026111.t1 AT3G49120 49.351 308 151 3 4 308 31 336 1.12e-95 287
MS.gene026111.t1 AT3G49110 49.351 308 151 3 4 308 32 337 1.71e-95 286
MS.gene026111.t1 AT4G08780 47.078 308 158 3 4 308 23 328 3.24e-95 285
MS.gene026111.t1 AT2G35380 49.671 304 146 4 9 307 34 335 1.87e-92 278
MS.gene026111.t1 AT1G14550 45.955 309 154 4 2 307 23 321 6.70e-92 276
MS.gene026111.t1 AT5G58390 52.145 303 130 5 9 307 25 316 6.72e-92 276
MS.gene026111.t1 AT2G22420 45.902 305 155 4 5 307 23 319 1.32e-91 276
MS.gene026111.t1 AT5G64120 47.826 299 147 5 9 307 39 328 1.43e-90 273
MS.gene026111.t1 AT5G58400 48.684 304 139 6 9 307 34 325 2.44e-89 270
MS.gene026111.t1 AT2G41480 48.026 304 145 6 9 307 33 328 2.60e-87 265
MS.gene026111.t1 AT1G68850 43.226 310 167 5 5 308 30 336 2.87e-86 262
MS.gene026111.t1 AT4G11290 45.545 303 156 4 9 307 29 326 2.88e-86 262
MS.gene026111.t1 AT1G14540 44.481 308 159 3 2 307 18 315 1.46e-85 259
MS.gene026111.t1 AT5G39580 47.667 300 147 6 9 307 29 319 3.10e-85 259
MS.gene026111.t1 AT5G15180 44.000 300 161 4 9 307 36 329 8.48e-85 258
MS.gene026111.t1 AT3G01190 45.333 300 155 5 9 307 30 321 1.91e-83 254
MS.gene026111.t1 AT1G05260 43.226 310 169 4 1 308 22 326 1.25e-81 250
MS.gene026111.t1 AT3G21770 43.046 302 165 4 9 308 33 329 6.21e-79 243
MS.gene026111.t1 AT1G05240 42.574 303 163 5 9 307 30 325 2.65e-78 241
MS.gene026111.t1 AT1G05250 42.574 303 163 5 9 307 30 325 2.65e-78 241
MS.gene026111.t1 AT5G64110 43.607 305 166 4 3 307 32 330 5.92e-77 238
MS.gene026111.t1 AT3G03670 43.189 301 163 4 9 307 27 321 1.39e-76 237
MS.gene026111.t1 AT5G17820 42.475 299 159 5 9 307 28 313 1.59e-76 236
MS.gene026111.t1 AT5G51890 41.694 307 165 7 5 307 26 322 2.53e-75 234
MS.gene026111.t1 AT5G17820 42.475 299 159 5 9 307 81 366 3.58e-75 235
MS.gene026111.t1 AT5G42180 42.295 305 162 7 5 306 23 316 5.89e-75 233
MS.gene026111.t1 AT4G37530 41.776 304 167 4 9 307 31 329 1.58e-74 232
MS.gene026111.t1 AT1G71695 42.951 305 157 8 9 308 48 340 3.55e-74 232
MS.gene026111.t1 AT1G77100 45.574 305 147 8 9 307 28 319 5.34e-74 230
MS.gene026111.t1 AT5G14130 40.523 306 174 4 4 307 31 330 1.74e-72 227
MS.gene026111.t1 AT4G25980 41.118 304 167 4 9 307 30 326 2.14e-72 226
MS.gene026111.t1 AT2G18980 41.176 306 172 4 4 307 24 323 3.41e-72 226
MS.gene026111.t1 AT5G14130 40.523 306 174 4 4 307 72 371 6.55e-72 226
MS.gene026111.t1 AT4G37520 39.803 304 173 4 9 307 31 329 1.01e-71 225
MS.gene026111.t1 AT4G30170 40.864 301 170 4 9 307 31 325 1.23e-71 224
MS.gene026111.t1 AT4G33420 42.951 305 156 8 5 307 37 325 2.10e-70 221
MS.gene026111.t1 AT4G17690 40.000 310 172 4 3 308 24 323 5.09e-70 220
MS.gene026111.t1 AT2G35380 48.374 246 122 3 65 307 4 247 7.59e-70 217
MS.gene026111.t1 AT4G33420 42.951 305 156 8 5 307 84 372 7.73e-70 221
MS.gene026111.t1 AT4G33870 37.048 332 166 5 9 303 72 397 3.41e-69 221
MS.gene026111.t1 AT5G64100 41.137 299 168 6 9 307 41 331 5.69e-69 218
MS.gene026111.t1 AT4G37520 39.145 304 172 5 9 307 31 326 9.20e-69 217
MS.gene026111.t1 AT5G24070 39.103 312 174 7 4 308 34 336 4.19e-68 216
MS.gene026111.t1 AT2G43480 40.193 311 170 7 4 307 34 335 1.08e-66 212
MS.gene026111.t1 AT3G49960 38.511 309 180 4 4 307 26 329 3.50e-65 208
MS.gene026111.t1 AT4G37530 44.177 249 134 3 9 252 31 279 1.17e-64 205
MS.gene026111.t1 AT5G67400 38.511 309 180 4 4 307 26 329 2.54e-64 206
MS.gene026111.t1 AT5G47000 38.816 304 173 4 9 308 37 331 3.22e-64 206
MS.gene026111.t1 AT2G39040 40.256 313 171 7 4 307 45 350 3.48e-63 203
MS.gene026111.t1 AT2G34060 38.658 313 178 5 2 305 37 344 5.12e-63 203
MS.gene026111.t1 AT2G24800 40.984 305 164 7 9 307 35 329 5.29e-63 202
MS.gene026111.t1 AT5G22410 39.867 301 166 9 9 304 32 322 2.39e-62 201
MS.gene026111.t1 AT5G40150 37.742 310 175 6 4 307 31 328 2.73e-62 201
MS.gene026111.t1 AT1G30870 39.274 303 170 6 9 308 55 346 1.18e-60 197
MS.gene026111.t1 AT3G28200 37.013 308 179 5 4 307 20 316 2.17e-59 192
MS.gene026111.t1 AT4G31760 37.829 304 174 7 9 307 33 326 1.16e-58 191
MS.gene026111.t1 AT4G26010 38.079 302 166 7 9 307 26 309 1.39e-58 190
MS.gene026111.t1 AT4G26010 38.079 302 166 7 9 307 54 337 2.49e-58 191
MS.gene026111.t1 AT4G21960 34.688 320 175 7 3 308 29 328 1.50e-55 183
MS.gene026111.t1 AT1G34510 35.216 301 176 6 9 307 26 309 3.17e-55 182
MS.gene026111.t1 AT1G24110 35.443 316 184 6 1 307 18 322 4.02e-55 182
MS.gene026111.t1 AT5G39580 51.462 171 80 3 9 179 29 196 2.58e-47 159
MS.gene026111.t1 AT2G37130 33.553 304 187 5 9 307 3 296 2.73e-47 160
MS.gene026111.t1 AT2G37130 33.553 304 187 5 9 307 34 327 6.38e-47 160
MS.gene026111.t1 AT3G17070 31.949 313 192 7 5 307 38 339 1.24e-43 152
MS.gene026111.t1 AT4G25980 46.296 162 85 2 9 170 75 234 1.11e-41 146
MS.gene026111.t1 AT2G24800 41.379 203 106 6 9 204 35 231 3.03e-35 128
MS.gene026111.t1 AT3G17070 30.996 271 165 8 47 307 18 276 6.04e-33 123
MS.gene026111.t1 AT1G77490 25.461 271 145 11 39 289 106 339 9.86e-14 71.6
MS.gene026111.t1 AT1G77490 25.461 271 145 11 39 289 106 339 1.28e-13 71.2
MS.gene026111.t1 AT3G42570 30.667 150 93 4 23 170 9 149 1.72e-12 64.7

Find 50 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCAAGAATTTACTTAA+TGG 0.187588 2.1:-48663480 MS.gene026111:CDS
TTTCATTCTCACTATAATAT+TGG 0.220447 2.1:+48663382 None:intergenic
AAAGACGTTGTTACTTTATC+AGG 0.235960 2.1:-48665223 MS.gene026111:intron
CATCACTTGAAAAGAGAATT+TGG 0.238726 2.1:+48663436 None:intergenic
GGGAATATAAATCCACTTAT+TGG 0.243677 2.1:-48663318 MS.gene026111:CDS
TCAAATTGATCAATTGAGTA+TGG 0.254466 2.1:+48663510 None:intergenic
CCTCTAGCTGAATTTAAGTT+TGG 0.266413 2.1:+48665625 None:intergenic
TCTTTAGGTGCCCACACTAT+TGG 0.348442 2.1:-48663681 MS.gene026111:intron
ATTGTCTGGTTCTTGTGTTC+CGG 0.349407 2.1:+48663614 None:intergenic
CCTAGCTGAACGTACCAAAA+AGG 0.375211 2.1:+48665358 None:intergenic
AACAGAATCTCTAGCAACTA+TGG 0.388400 2.1:+48665525 None:intergenic
GATGGTTCAGTTCTGCTTGA+TGG 0.400241 2.1:-48665676 MS.gene026111:CDS
CACTTCAACCACTAAACAAT+TGG 0.408952 2.1:-48663406 MS.gene026111:CDS
AAGAATTTACTTAATGGAAA+AGG 0.424516 2.1:-48663474 MS.gene026111:CDS
TGCCTATGCTATGATTAAGA+TGG 0.431308 2.1:-48663340 MS.gene026111:CDS
ATATTGGACCAATTGTTTAG+TGG 0.439020 2.1:+48663398 None:intergenic
TCATATTCTAAAGTATTGTC+TGG 0.440491 2.1:+48663600 None:intergenic
TTTGGCTCTCAGGGTTGTGA+TGG 0.446467 2.1:-48665694 MS.gene026111:intron
GCCTATGCTATGATTAAGAT+GGG 0.460291 2.1:-48663339 MS.gene026111:CDS
TTACATTTACAAAGCAATCA+TGG 0.460562 2.1:+48666604 None:intergenic
AACAGATTATTCAACTTCTC+CGG 0.465572 2.1:-48663633 MS.gene026111:CDS
AAGACCAACGTTATCAAACT+TGG 0.468625 2.1:+48665252 None:intergenic
TTGGTTCTGAGGGAGAGATT+AGG 0.479464 2.1:-48663299 MS.gene026111:CDS
AGAGAATTTGGTCAGAGCTA+AGG 0.483371 2.1:+48663448 None:intergenic
GCTAGGACGCAGAGATGGAT+TGG 0.510343 2.1:-48665341 MS.gene026111:CDS
TCTCCCTCAGAACCAATAAG+TGG 0.511178 2.1:+48663306 None:intergenic
ATAGTACTTAGTGAGTCAAA+TGG 0.513048 2.1:+48665280 None:intergenic
AATCCACTTATTGGTTCTGA+GGG 0.517484 2.1:-48663309 MS.gene026111:CDS
AAATCCACTTATTGGTTCTG+AGG 0.528451 2.1:-48663310 MS.gene026111:CDS
TCAGTTCTGCTTGATGGAGA+CGG 0.539101 2.1:-48665670 MS.gene026111:CDS
CAAATTGATCAATTGAGTAT+GGG 0.540687 2.1:+48663511 None:intergenic
GGGGTCAATCGAGGTCTCAT+AGG 0.541891 2.1:+48666738 None:intergenic
CAAAACTTGTGTCCACAAGA+TGG 0.549054 2.1:-48663561 MS.gene026111:CDS
CAATTGTTTAGTGGTTGAAG+TGG 0.559168 2.1:+48663407 None:intergenic
ATTTCCAAGTTTGATAACGT+TGG 0.559993 2.1:-48665256 MS.gene026111:CDS
GTGTTACCATCTCCATCTTG+TGG 0.563148 2.1:+48663549 None:intergenic
ACCTAGCTCGTCCAATAGTG+TGG 0.565589 2.1:+48663670 None:intergenic
CTTAGTGAGTCAAATGGAGA+AGG 0.571397 2.1:+48665286 None:intergenic
CCAAACTTAAATTCAGCTAG+AGG 0.574703 2.1:-48665625 MS.gene026111:CDS
CCCCATCTTAATCATAGCAT+AGG 0.598668 2.1:+48663338 None:intergenic
GTTCAGCTAGGACGCAGAGA+TGG 0.601311 2.1:-48665346 MS.gene026111:CDS
TATGGCTAATATATCAGCAC+AGG 0.604591 2.1:+48665543 None:intergenic
AGATAGAATCAAAAGTGCAG+TGG 0.620562 2.1:-48665590 MS.gene026111:CDS
TTGTGTCCACAAGATGGAGA+TGG 0.623591 2.1:-48663555 MS.gene026111:CDS
CCTAGCTCGTCCAATAGTGT+GGG 0.634190 2.1:+48663671 None:intergenic
AATAAATGAAGAGATTCGAA+TGG 0.634769 2.1:-48666652 MS.gene026111:CDS
CCCACACTATTGGACGAGCT+AGG 0.650505 2.1:-48663671 MS.gene026111:CDS
GCAGTGGAGAGTTCATGTAG+TGG 0.653025 2.1:-48665574 MS.gene026111:CDS
CCTATGCTATGATTAAGATG+GGG 0.675465 2.1:-48663338 MS.gene026111:CDS
ATTGGTCTCAAACAAAACAC+AGG 0.712701 2.1:-48665323 MS.gene026111:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr2.1:48665124-48665143 MS.gene026111:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr2.1:48665143-48665124 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG - chr2.1:48665125-48665144 MS.gene026111:intron 0.0%
!! TATATATATATATATATATA+TGG + chr2.1:48665144-48665125 None:intergenic 0.0%
!!! TATATATATATATATATTTT+TGG - chr2.1:48665431-48665450 MS.gene026111:intron 0.0%
!!! TTTTTTTTATTTTTTAGGTT+CGG + chr2.1:48664960-48664979 None:intergenic 10.0%
!! AAAATGTTGGATAAATAAAA+AGG + chr2.1:48664295-48664314 None:intergenic 15.0%
!! CAAATAATTTATTTGACTAT+AGG + chr2.1:48664816-48664835 None:intergenic 15.0%
!!! ACTTATTTTCATAAACTTTT+TGG - chr2.1:48666095-48666114 MS.gene026111:intron 15.0%
!!! GAATGAAAGAATTTTTTTTA+TGG - chr2.1:48666640-48666659 MS.gene026111:CDS 15.0%
!!! TAGTTTCTTTTTTTTTGTTA+GGG + chr2.1:48666023-48666042 None:intergenic 15.0%
!!! TTAGTTTCTTTTTTTTTGTT+AGG + chr2.1:48666024-48666043 None:intergenic 15.0%
!!! TTTATTTAAATAGTCTTTTG+TGG + chr2.1:48663942-48663961 None:intergenic 15.0%
!!! TTTTATTTATCCAACATTTT+TGG - chr2.1:48664295-48664314 MS.gene026111:intron 15.0%
!! AAGAATTTACTTAATGGAAA+AGG - chr2.1:48666533-48666552 MS.gene026111:intron 20.0%
!! ATTCCAATGCTTATAAAAAA+AGG + chr2.1:48664238-48664257 None:intergenic 20.0%
!! ATTGATCTAATAGTGAAAAT+CGG + chr2.1:48663804-48663823 None:intergenic 20.0%
!! TAACTATTGTAAAAAGATCA+GGG + chr2.1:48663316-48663335 None:intergenic 20.0%
!! TACTTCAAGAATTTACTTAA+TGG - chr2.1:48666527-48666546 MS.gene026111:intron 20.0%
!! TTAGTTTCTATAAGCTATTT+GGG + chr2.1:48665993-48666012 None:intergenic 20.0%
!! TTTCATTCTCACTATAATAT+TGG + chr2.1:48666628-48666647 None:intergenic 20.0%
!!! AAATTTTAAGAGACTATGTT+TGG - chr2.1:48663725-48663744 MS.gene026111:intron 20.0%
!!! AACCTTTTGTGTAAAAATTT+TGG - chr2.1:48665782-48665801 MS.gene026111:intron 20.0%
!!! ATCTGAAAGAATTTTTTCTA+TGG - chr2.1:48663981-48664000 MS.gene026111:intron 20.0%
!!! TACCAAAATTTTTACACAAA+AGG + chr2.1:48665787-48665806 None:intergenic 20.0%
!!! TTGTATAGTTTTATTGAAGT+AGG + chr2.1:48663485-48663504 None:intergenic 20.0%
!!! TTTGTGTAAAAATTTTGGTA+AGG - chr2.1:48665787-48665806 MS.gene026111:intron 20.0%
! AATAAATGAAGAGATTCGAA+TGG - chr2.1:48663355-48663374 MS.gene026111:CDS 25.0%
! ACATAGTCTCTTAAAATTTG+TGG + chr2.1:48663724-48663743 None:intergenic 25.0%
! CAAATATAAAAAAGACAACC+CGG + chr2.1:48665881-48665900 None:intergenic 25.0%
! CAAATTGATCAATTGAGTAT+GGG + chr2.1:48666499-48666518 None:intergenic 25.0%
! CTAACTATTGTAAAAAGATC+AGG + chr2.1:48663317-48663336 None:intergenic 25.0%
! CTACTATTTCCTAAATTTGA+GGG - chr2.1:48664046-48664065 MS.gene026111:intron 25.0%
! CTCATATTACATTAAGACAA+AGG - chr2.1:48666236-48666255 MS.gene026111:intron 25.0%
! CTTAGTTTCTATAAGCTATT+TGG + chr2.1:48665994-48666013 None:intergenic 25.0%
! GGTAAATGAATTGAATTTAG+AGG + chr2.1:48666281-48666300 None:intergenic 25.0%
! TAATTGAACTTGAACATACT+AGG + chr2.1:48664510-48664529 None:intergenic 25.0%
! TAGCATGCATAAATAGAAAT+TGG + chr2.1:48666302-48666321 None:intergenic 25.0%
! TCAAATTGATCAATTGAGTA+TGG + chr2.1:48666500-48666519 None:intergenic 25.0%
! TCATATCTCATTTGATTCAA+TGG + chr2.1:48663835-48663854 None:intergenic 25.0%
! TGCATACAATACATCAAAAA+TGG - chr2.1:48665811-48665830 MS.gene026111:intron 25.0%
! TGTCAAAAAAGTCACATATT+TGG - chr2.1:48664846-48664865 MS.gene026111:intron 25.0%
! TTACATTTACAAAGCAATCA+TGG + chr2.1:48663406-48663425 None:intergenic 25.0%
!! AATGAGTCAGATTAGTTAAA+AGG - chr2.1:48665504-48665523 MS.gene026111:intron 25.0%
!! TAATAGTGAAAATCGGTTTA+TGG + chr2.1:48663797-48663816 None:intergenic 25.0%
!! TATGCATGCTAATTTTCTTT+AGG - chr2.1:48666311-48666330 MS.gene026111:intron 25.0%
!! TCTTTAAGAGAATTGTTAAC+CGG + chr2.1:48665097-48665116 None:intergenic 25.0%
!! TTTTACAATAGTTAGAAGAG+AGG - chr2.1:48663322-48663341 MS.gene026111:CDS 25.0%
!! TTTTAGTCCTTACAAATGAA+GGG + chr2.1:48664086-48664105 None:intergenic 25.0%
!! TTTTATCAAGTCACACATTA+AGG - chr2.1:48665250-48665269 MS.gene026111:CDS 25.0%
!!! AAAAACACCAACTTACTTTT+AGG + chr2.1:48665320-48665339 None:intergenic 25.0%
!!! AATTTTAGTCCCTCAAATTT+AGG + chr2.1:48664058-48664077 None:intergenic 25.0%
!!! ATTTTAGTCCTTACAAATGA+AGG + chr2.1:48664087-48664106 None:intergenic 25.0%
!!! GTTATGTTTTGAACATGAAA+TGG - chr2.1:48665458-48665477 MS.gene026111:intron 25.0%
!!! TAGATTTTTTCTCTGTAAGT+GGG - chr2.1:48665602-48665621 MS.gene026111:CDS 25.0%
!!! TAGCCTTTTTTTATAAGCAT+TGG - chr2.1:48664232-48664251 MS.gene026111:intron 25.0%
!!! TATTTTTGGGAGAGTTTATT+TGG - chr2.1:48665703-48665722 MS.gene026111:intron 25.0%
!!! TCATATTCTAAAGTATTGTC+TGG + chr2.1:48666410-48666429 None:intergenic 25.0%
!!! TGAAAGAATTTTTTCTATGG+AGG - chr2.1:48663984-48664003 MS.gene026111:intron 25.0%
!!! TTTACACAAAAGGTTGTTTT+CGG + chr2.1:48665777-48665796 None:intergenic 25.0%
AACAGATTATTCAACTTCTC+CGG - chr2.1:48666374-48666393 MS.gene026111:intron 30.0%
ACACATTCCTAAAAGTAAGT+TGG - chr2.1:48665310-48665329 MS.gene026111:CDS 30.0%
ACGTTGTCCTGTAAAAATAT+GGG + chr2.1:48663292-48663311 None:intergenic 30.0%
AGATATGATGTGACTTCTAT+TGG - chr2.1:48663847-48663866 MS.gene026111:intron 30.0%
ATAAAAGACACCTTCATGAA+AGG - chr2.1:48665365-48665384 MS.gene026111:CDS 30.0%
ATAACATTAACATCACCCTA+CGG + chr2.1:48663560-48663579 None:intergenic 30.0%
ATAGTACTTAGTGAGTCAAA+TGG + chr2.1:48664730-48664749 None:intergenic 30.0%
ATATTGGACCAATTGTTTAG+TGG + chr2.1:48666612-48666631 None:intergenic 30.0%
ATTTGTAAGAGTTTGATTGG+AGG + chr2.1:48665650-48665669 None:intergenic 30.0%
CATCACTTGAAAAGAGAATT+TGG + chr2.1:48666574-48666593 None:intergenic 30.0%
CTCACCTATACACAATAAAT+TGG + chr2.1:48663758-48663777 None:intergenic 30.0%
GAAGCCAATTTATTGTGTAT+AGG - chr2.1:48663751-48663770 MS.gene026111:intron 30.0%
GCATAGTTAATTAAGTGCTT+AGG + chr2.1:48666181-48666200 None:intergenic 30.0%
GCTACTATTTCCTAAATTTG+AGG - chr2.1:48664045-48664064 MS.gene026111:intron 30.0%
GGGAATATAAATCCACTTAT+TGG - chr2.1:48666689-48666708 MS.gene026111:CDS 30.0%
GGTGCAAAATTTGAGAAAAT+TGG + chr2.1:48663703-48663722 None:intergenic 30.0%
TCAAATCTTATATAGCCGTA+GGG - chr2.1:48663542-48663561 MS.gene026111:CDS 30.0%
TCCCAAAAATATCTTTCAAG+TGG + chr2.1:48665694-48665713 None:intergenic 30.0%
TGATAAAAAACACCACCAAA+GGG + chr2.1:48665238-48665257 None:intergenic 30.0%
TGGATTTGTAAGAGTTTGAT+TGG + chr2.1:48665653-48665672 None:intergenic 30.0%
TTCAAATCTTATATAGCCGT+AGG - chr2.1:48663541-48663560 MS.gene026111:CDS 30.0%
TTGATAAAAAACACCACCAA+AGG + chr2.1:48665239-48665258 None:intergenic 30.0%
TTGTCGTGTGATTAAAAGAT+CGG - chr2.1:48665742-48665761 MS.gene026111:intron 30.0%
! AGTCAGATTAGTTAAAAGGA+CGG - chr2.1:48665508-48665527 MS.gene026111:intron 30.0%
! CCCAAAAATATCTTTCAAGT+GGG + chr2.1:48665693-48665712 None:intergenic 30.0%
! CCCACTTGAAAGATATTTTT+GGG - chr2.1:48665690-48665709 MS.gene026111:intron 30.0%
! GTGATCATATTTTGTAGAGT+GGG - chr2.1:48664623-48664642 MS.gene026111:intron 30.0%
! TCCCACTTGAAAGATATTTT+TGG - chr2.1:48665689-48665708 MS.gene026111:intron 30.0%
! TGATCATATTTTGTAGAGTG+GGG - chr2.1:48664624-48664643 MS.gene026111:intron 30.0%
! TGTGATCATATTTTGTAGAG+TGG - chr2.1:48664622-48664641 MS.gene026111:intron 30.0%
!! AAAGACGTTGTTACTTTATC+AGG - chr2.1:48664784-48664803 MS.gene026111:intron 30.0%
!! ATTTCCAAGTTTGATAACGT+TGG - chr2.1:48664751-48664770 MS.gene026111:intron 30.0%
!! TTACACAAAAGGTTGTTTTC+GGG + chr2.1:48665776-48665795 None:intergenic 30.0%
!!! AGATTTTTTCTCTGTAAGTG+GGG - chr2.1:48665603-48665622 MS.gene026111:CDS 30.0%
!!! CGGGTTGTCTTTTTTATATT+TGG - chr2.1:48665879-48665898 MS.gene026111:intron 30.0%
!!! GTAGATTTTTTCTCTGTAAG+TGG - chr2.1:48665601-48665620 MS.gene026111:CDS 30.0%
AACAGAATCTCTAGCAACTA+TGG + chr2.1:48664485-48664504 None:intergenic 35.0%
AAGACCAACGTTATCAAACT+TGG + chr2.1:48664758-48664777 None:intergenic 35.0%
ACATTGACACAAGAAACGTT+TGG + chr2.1:48666206-48666225 None:intergenic 35.0%
ATAGAAGACACCTTTCATGA+AGG + chr2.1:48665378-48665397 None:intergenic 35.0%
CAATTGTTTAGTGGTTGAAG+TGG + chr2.1:48666603-48666622 None:intergenic 35.0%
CACGTTGTCCTGTAAAAATA+TGG + chr2.1:48663293-48663312 None:intergenic 35.0%
CACTTCAACCACTAAACAAT+TGG - chr2.1:48666601-48666620 MS.gene026111:intron 35.0%
CCAAACTTAAATTCAGCTAG+AGG - chr2.1:48664382-48664401 MS.gene026111:intron 35.0%
CCTATGCTATGATTAAGATG+GGG - chr2.1:48666669-48666688 MS.gene026111:CDS 35.0%
CGTTGTCCTGTAAAAATATG+GGG + chr2.1:48663291-48663310 None:intergenic 35.0%
GCCTATGCTATGATTAAGAT+GGG - chr2.1:48666668-48666687 MS.gene026111:CDS 35.0%
GTGAAAAACACGCTTATGTA+TGG - chr2.1:48663869-48663888 MS.gene026111:intron 35.0%
TAAAAATATGGGGTCAATCG+AGG + chr2.1:48663281-48663300 None:intergenic 35.0%
TAAGAGTTTGATTGGAGGAT+GGG + chr2.1:48665645-48665664 None:intergenic 35.0%
TATGGCTAATATATCAGCAC+AGG + chr2.1:48664467-48664486 None:intergenic 35.0%
TGCCTATGCTATGATTAAGA+TGG - chr2.1:48666667-48666686 MS.gene026111:CDS 35.0%
TTACCAACCCTTCATTTGTA+AGG - chr2.1:48664076-48664095 MS.gene026111:intron 35.0%
TTTCCTTAACTAGTGTTCAG+TGG - chr2.1:48665068-48665087 MS.gene026111:intron 35.0%
! AGATAGAATCAAAAGTGCAG+TGG - chr2.1:48664417-48664436 MS.gene026111:intron 35.0%
! ATGGTAATGTATTTGAGCTG+AGG - chr2.1:48665477-48665496 MS.gene026111:intron 35.0%
! ATTGGTCTCAAACAAAACAC+AGG - chr2.1:48664684-48664703 MS.gene026111:intron 35.0%
! CCTCTAGCTGAATTTAAGTT+TGG + chr2.1:48664385-48664404 None:intergenic 35.0%
! GATCATATTTTGTAGAGTGG+GGG - chr2.1:48664625-48664644 MS.gene026111:intron 35.0%
! GTCAGATTAGTTAAAAGGAC+GGG - chr2.1:48665509-48665528 MS.gene026111:intron 35.0%
! TGGTAATGTATTTGAGCTGA+GGG - chr2.1:48665478-48665497 MS.gene026111:intron 35.0%
! TTTTCTTAACTAGTGCTTCG+AGG + chr2.1:48664911-48664930 None:intergenic 35.0%
!! AAATCCACTTATTGGTTCTG+AGG - chr2.1:48666697-48666716 MS.gene026111:CDS 35.0%
!! AATCCACTTATTGGTTCTGA+GGG - chr2.1:48666698-48666717 MS.gene026111:CDS 35.0%
!! GATTGACCCCATATTTTTAC+AGG - chr2.1:48663282-48663301 MS.gene026111:CDS 35.0%
AAGAGTTTGATTGGAGGATG+GGG + chr2.1:48665644-48665663 None:intergenic 40.0%
AGAGAATTTGGTCAGAGCTA+AGG + chr2.1:48666562-48666581 None:intergenic 40.0%
AGTCCTTACAAATGAAGGGT+TGG + chr2.1:48664082-48664101 None:intergenic 40.0%
CAAAACTTGTGTCCACAAGA+TGG - chr2.1:48666446-48666465 MS.gene026111:intron 40.0%
CCCCATCTTAATCATAGCAT+AGG + chr2.1:48666672-48666691 None:intergenic 40.0%
CTTAGTGAGTCAAATGGAGA+AGG + chr2.1:48664724-48664743 None:intergenic 40.0%
GGTAATGTATTTGAGCTGAG+GGG - chr2.1:48665479-48665498 MS.gene026111:intron 40.0%
GTAAGAGTTTGATTGGAGGA+TGG + chr2.1:48665646-48665665 None:intergenic 40.0%
TAAAAAACACCACCAAAGGG+TGG + chr2.1:48665235-48665254 None:intergenic 40.0%
TGTCCACTGAACACTAGTTA+AGG + chr2.1:48665074-48665093 None:intergenic 40.0%
TTATGTTACAAGCCACCCTT+TGG - chr2.1:48665220-48665239 MS.gene026111:intron 40.0%
! ATATCTTTCAAGTGGGAGCT+TGG + chr2.1:48665686-48665705 None:intergenic 40.0%
! ATGCGGGAGCTTTAATATAC+CGG - chr2.1:48665859-48665878 MS.gene026111:intron 40.0%
!! ATTGTCTGGTTCTTGTGTTC+CGG + chr2.1:48666396-48666415 None:intergenic 40.0%
!!! ATCCAACATTTTTGGCTCTC+AGG - chr2.1:48664303-48664322 MS.gene026111:intron 40.0%
!!! TCCAACATTTTTGGCTCTCA+GGG - chr2.1:48664304-48664323 MS.gene026111:intron 40.0%
AACTAGTGTTCAGTGGACAC+CGG - chr2.1:48665075-48665094 MS.gene026111:intron 45.0%
ACCCTGAGAGCCAAAAATGT+TGG + chr2.1:48664308-48664327 None:intergenic 45.0%
ATTAAAGCTCCCGCATACGT+AGG + chr2.1:48665855-48665874 None:intergenic 45.0%
CCTAGCTGAACGTACCAAAA+AGG + chr2.1:48664652-48664671 None:intergenic 45.0%
GATGGTTCAGTTCTGCTTGA+TGG - chr2.1:48664331-48664350 MS.gene026111:intron 45.0%
GTGTTACCATCTCCATCTTG+TGG + chr2.1:48666461-48666480 None:intergenic 45.0%
TCAGTTCTGCTTGATGGAGA+CGG - chr2.1:48664337-48664356 MS.gene026111:intron 45.0%
TCTCCCTCAGAACCAATAAG+TGG + chr2.1:48666704-48666723 None:intergenic 45.0%
TCTCTGTAAGTGGGGTGAAA+GGG - chr2.1:48665611-48665630 MS.gene026111:CDS 45.0%
TCTTTAGGTGCCCACACTAT+TGG - chr2.1:48666326-48666345 MS.gene026111:intron 45.0%
TTAAAGCTCCCGCATACGTA+GGG + chr2.1:48665854-48665873 None:intergenic 45.0%
TTCTCTGTAAGTGGGGTGAA+AGG - chr2.1:48665610-48665629 MS.gene026111:CDS 45.0%
TTGTGTCCACAAGATGGAGA+TGG - chr2.1:48666452-48666471 MS.gene026111:intron 45.0%
! TGCGGGAGCTTTAATATACC+GGG - chr2.1:48665860-48665879 MS.gene026111:intron 45.0%
!! CCTTTTTGGTACGTTCAGCT+AGG - chr2.1:48664649-48664668 MS.gene026111:intron 45.0%
!! TTGGTTCTGAGGGAGAGATT+AGG - chr2.1:48666708-48666727 MS.gene026111:CDS 45.0%
!!! AGAATTTTTTTTTATTTTTT+AGG + chr2.1:48664965-48664984 None:intergenic 5.0%
ACCTAGCTCGTCCAATAGTG+TGG + chr2.1:48666340-48666359 None:intergenic 50.0%
CCTAGCTCGTCCAATAGTGT+GGG + chr2.1:48666339-48666358 None:intergenic 50.0%
CTTCCCAAACCCTACGTATG+CGG - chr2.1:48665842-48665861 MS.gene026111:intron 50.0%
GCAGTGGAGAGTTCATGTAG+TGG - chr2.1:48664433-48664452 MS.gene026111:intron 50.0%
TGTTACAAGCCACCCTTTGG+TGG - chr2.1:48665223-48665242 MS.gene026111:intron 50.0%
TTCCCAAACCCTACGTATGC+GGG - chr2.1:48665843-48665862 MS.gene026111:intron 50.0%
! TCTTTCAAGTGGGAGCTTGG+TGG + chr2.1:48665683-48665702 None:intergenic 50.0%
! TGTAGAGTGGGGGTCCTTTT+TGG - chr2.1:48664635-48664654 MS.gene026111:intron 50.0%
!! TTTGGCTCTCAGGGTTGTGA+TGG - chr2.1:48664313-48664332 MS.gene026111:intron 50.0%
CCCACACTATTGGACGAGCT+AGG - chr2.1:48666336-48666355 MS.gene026111:intron 55.0%
CTCCCGCATACGTAGGGTTT+GGG + chr2.1:48665848-48665867 None:intergenic 55.0%
GCTAGGACGCAGAGATGGAT+TGG - chr2.1:48664666-48664685 MS.gene026111:intron 55.0%
GTTCAGCTAGGACGCAGAGA+TGG - chr2.1:48664661-48664680 MS.gene026111:intron 55.0%
GCTCCCGCATACGTAGGGTT+TGG + chr2.1:48665849-48665868 None:intergenic 60.0%
!! GGGAGCTTGGTGGTGAGCTA+TGG + chr2.1:48665673-48665692 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 48663272 48666757 48663272 ID=MS.gene026111
chr2.1 mRNA 48663272 48666757 48663272 ID=MS.gene026111.t1;Parent=MS.gene026111
chr2.1 exon 48666608 48666757 48666608 ID=MS.gene026111.t1.exon1;Parent=MS.gene026111.t1
chr2.1 CDS 48666608 48666757 48666608 ID=cds.MS.gene026111.t1;Parent=MS.gene026111.t1
chr2.1 exon 48665519 48665704 48665519 ID=MS.gene026111.t1.exon2;Parent=MS.gene026111.t1
chr2.1 CDS 48665519 48665704 48665519 ID=cds.MS.gene026111.t1;Parent=MS.gene026111.t1
chr2.1 exon 48665224 48665389 48665224 ID=MS.gene026111.t1.exon3;Parent=MS.gene026111.t1
chr2.1 CDS 48665224 48665389 48665224 ID=cds.MS.gene026111.t1;Parent=MS.gene026111.t1
chr2.1 exon 48663272 48663696 48663272 ID=MS.gene026111.t1.exon4;Parent=MS.gene026111.t1
chr2.1 CDS 48663272 48663696 48663272 ID=cds.MS.gene026111.t1;Parent=MS.gene026111.t1
Gene Sequence

>MS.gene026111

ATGAGACCTCGATTGACCCCATATTTTTACAGGACAACGTGCCCTGATCTTTTTACAATAGTTAGAAGAGAGGTTCTTAATGCAATAAATGAAGAGATTCGAATGGCTGCTTCTTTGCTTCGTCTTCACTTCCATGATTGCTTTGTAAATGTAAGTAAGTTAGAGCTAATAGTAGATTATTTTTACTTCTCATATAACAATATATACTTACCTACTTCAATAAAACTATACAATAATATTAAAACTATATTTTTTTTAATACATACATATTCAAATCTTATATAGCCGTAGGGTGATGTTAATGTTATTACGAGTAAATAAATTTTAGTTATTGAAATTGTAAAAGTTGATAAATTTGAGAAATAGAAAGAAAAAAATTTGACTTAGTAAAAAAAAAAAAAAGAATTTATTTTTTTACAAAATATCAACCAATTTTCTCAAATTTTGCACCACAAATTTTAAGAGACTATGTTTGGTTTGAAGCCAATTTATTGTGTATAGGTGAGATAAGTCTTGCATCGTCCATAAACCGATTTTCACTATTAGATCAATAAATATCACCATTGAATCAAATGAGATATGATGTGACTTCTATTGGTGAAAAACACGCTTATGTATGGTACAAGAGTATTTTATTCACGCACATTAGACAAAACATGTTTTGATGCCACAAAAGACTATTTAAATAAATATGTATGTCGTTTATTTGATCTGAAAGAATTTTTTCTATGGAGGAACTAAATTGATTGATATTTTTCTGTTTTAGATACTAAGCTACTATTTCCTAAATTTGAGGGACTAAAATTACCAACCCTTCATTTGTAAGGACTAAAATGTCTACTTATACACTTTTTTTTTTTTTACAAAATTTATTTATACTTTATTATGATAATATTAATTTTTAAAATATTTATGTAAATATCTAATTAGATGTCTCTGTAGAACATTTTTATTGAAACATAGCCTTTTTTTATAAGCATTGGAATATAGTATTAAATTTCTAATCTCTTCTTTATTTTACCTTTTTATTTATCCAACATTTTTGGCTCTCAGGGTTGTGATGGTTCAGTTCTGCTTGATGGAGACGGAGATATTGAGAAATTTGCAACTCCAAACTTAAATTCAGCTAGAGGATTTGAAGTCATAGATAGAATCAAAAGTGCAGTGGAGAGTTCATGTAGTGGAGTTGTGTCCTGTGCTGATATATTAGCCATAGTTGCTAGAGATTCTGTTCACCTAGTATGTTCAAGTTCAATTATTAAATATTCATAACTAATCATGCAAATATTAAAACAAATCTCTCTTTTAATTAGCAAATAATTTTCTAAATTTGTGTTTAGCTTAATTAATTGTGATCATATTTTGTAGAGTGGGGGTCCTTTTTGGTACGTTCAGCTAGGACGCAGAGATGGATTGGTCTCAAACAAAACACAGGCAAATAATGCAATTCCTTCTCCATTTGACTCACTAAGTACTATCATTTCCAAGTTTGATAACGTTGGTCTTAGTGTTAAAGACGTTGTTACTTTATCAGGTATAGTCCTATAGTCAAATAAATTATTTGAAATCTCATTTGTCAAAAAAGTCACATATTTGGTCTTTTGTTATTTAAAGAAAAAGTCATACTAACTCGTGTCCTCGAAGCACTAGTTAAGAAAAGTTAAAAGTAAAAATTTCTCATTAATCCGAACCTAAAAAATAAAAAAAAATTCTCATTAAAAACAACAAATTCTTGACATTCAAAAAGTTAAATACACAATTTTAACTCATTTTTCAATATGATATTTCTATATTGATTTCCTTAACTAGTGTTCAGTGGACACCGGTTAACAATTCTCTTAAAGAAATTCAGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGGTTATGTTACAAGCCACCCTTTGGTGGTGTTTTTTATCAAGTCACACATTAAGGTGTGATTTTCACTTTTTAGTTATAACTTTGATAAAAGACACATTCCTAAAAGTAAGTTGGTGTTTTTTCGCAAATGCTCATAGAGTAACTTGATAAAAGACACCTTCATGAAAGGTGTCTTCTATCATAACCCATATATATATATATATATATATATATATATATATATATATATTTTTGGAAGAGTTATGTTTTGAACATGAAATGGTAATGTATTTGAGCTGAGGGGTGAATGAGTCAGATTAGTTAAAAGGACGGGTTTAAACTCTAATGCAGAAGAAATATTAACATAACAATAACTTTATTGACATTTGTTGATAAAAAATTAGTAGATTTTTTCTCTGTAAGTGGGGTGAAAGGGATCAAAGCCCCATCCTCCAATCAAACTCTTACAAATCCATAGCTCACCACCAAGCTCCCACTTGAAAGATATTTTTGGGAGAGTTTATTTGGTACAACAGTAAAGTTGTTGTCGTGTGATTAAAAGATCGGATTTAAGTCCCGAAAACAACCTTTTGTGTAAAAATTTTGGTAAGGTTGCATACAATACATCAAAAATGGTGAAATCTCTTCCCAAACCCTACGTATGCGGGAGCTTTAATATACCGGGTTGTCTTTTTTATATTTGGACTTATCTTGCATGCGTGTTTAAAAGTGTTTATAAAAATCATTTGAGTTACTACATGTCTATAAATTGTTCTTATTTTCATAAACTTTCCCAAATAGCTTATAGAAACTAAGAATATTCCCTAACAAAAAAAAAGAAACTAAGAATATGACATATTTTAGTTTGAGTTGTAAGATATCTATGAAGTATTTGTAACTTATTTTCATAAACTTTTTGGAATAACTTATAGAAATAGATCTTATGCGAAGTTTTTTTGTCATTTACTCTTCAATTGTTGCCTAAGCACTTAATTAACTATGCAGCCAAACGTTTCTTGTGTCAATGTATCATTTTTGCTCATATTACATTAAGACAAAGGAAATTTCTTGCTTACTTTTCCTCTAAATTCAATTCATTTACCAATTTCTATTTATGCATGCTAATTTTCTTTAGGTGCCCACACTATTGGACGAGCTAGGTGCACATTTTTTAGCAACAGATTATTCAACTTCTCCGGAACACAAGAACCAGACAATACTTTAGAATATGAAATGCTAACTCAATTGCAAAACTTGTGTCCACAAGATGGAGATGGTAACACAACTACTGTTCTAGACCCATACTCAATTGATCAATTTGATAACAATTACTTCAAGAATTTACTTAATGGAAAAGGTCTCCTTAGCTCTGACCAAATTCTCTTTTCAAGTGATGAAGAAACCACTTCAACCACTAAACAATTGGTCCAATATTATAGTGAGAATGAAAGAATTTTTTTTATGGAATTTGCCTATGCTATGATTAAGATGGGGAATATAAATCCACTTATTGGTTCTGAGGGAGAGATTAGGAAGAGCTGTAGAGTGATTAATTCTTAA
Protein sequence

>MS.gene026111.t1

MRPRLTPYFYRTTCPDLFTIVRREVLNAINEEIRMAASLLRLHFHDCFVNGCDGSVLLDGDGDIEKFATPNLNSARGFEVIDRIKSAVESSCSGVVSCADILAIVARDSVHLSGGPFWYVQLGRRDGLVSNKTQANNAIPSPFDSLSTIISKFDNVGLSVKDVVTLSGAHTIGRARCTFFSNRLFNFSGTQEPDNTLEYEMLTQLQNLCPQDGDGNTTTVLDPYSIDQFDNNYFKNLLNGKGLLSSDQILFSSDEETTSTTKQLVQYYSENERIFFMEFAYAMIKMGNINPLIGSEGEIRKSCRVINS