Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61508.t1 | XP_003609303.1 | 96.2 | 320 | 12 | 0 | 1 | 320 | 1 | 320 | 1.00E-175 | 625.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61508.t1 | O80822 | 72.9 | 314 | 84 | 1 | 8 | 320 | 15 | 328 | 1.1e-135 | 484.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61508.t1 | G7JCW8 | 96.2 | 320 | 12 | 0 | 1 | 320 | 1 | 320 | 7.3e-176 | 625.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049265 | MS.gene61508 | 0.814049 | 1.88E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene61508 | -0.822913 | 1.84E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene61508 | -0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene61508 | -0.80962 | 1.73E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene61508 | -0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene050809 | MS.gene61508 | 0.848151 | 7.36E-60 | -1.69E-46 |
| MS.gene054290 | MS.gene61508 | 0.824872 | 6.38E-54 | -1.69E-46 |
| MS.gene054955 | MS.gene61508 | -0.802765 | 4.80E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene61508 | -0.813974 | 1.95E-51 | -1.69E-46 |
| MS.gene055497 | MS.gene61508 | 0.800673 | 1.29E-48 | -1.69E-46 |
| MS.gene055601 | MS.gene61508 | 0.804882 | 1.74E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene61508 | 0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene61508 | 0.802647 | 5.08E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene61508 | 0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene61508 | 0.826899 | 2.11E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene61508 | -0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene61508 | -0.817958 | 2.52E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071927 | MS.gene61508 | PPI |
| MS.gene012253 | MS.gene61508 | PPI |
| MS.gene026111 | MS.gene61508 | PPI |
| MS.gene85778 | MS.gene61508 | PPI |
| MS.gene24862 | MS.gene61508 | PPI |
| MS.gene002195 | MS.gene61508 | PPI |
| MS.gene047065 | MS.gene61508 | PPI |
| MS.gene025145 | MS.gene61508 | PPI |
| MS.gene01164 | MS.gene61508 | PPI |
| MS.gene54705 | MS.gene61508 | PPI |
| MS.gene012254 | MS.gene61508 | PPI |
| MS.gene002194 | MS.gene61508 | PPI |
| MS.gene051844 | MS.gene61508 | PPI |
| MS.gene051232 | MS.gene61508 | PPI |
| MS.gene57129 | MS.gene61508 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61508.t1 | MTR_4g114210 | 96.250 | 320 | 12 | 0 | 1 | 320 | 1 | 320 | 0.0 | 635 |
| MS.gene61508.t1 | MTR_2g008710 | 60.000 | 310 | 123 | 1 | 11 | 320 | 17 | 325 | 8.09e-135 | 385 |
| MS.gene61508.t1 | MTR_2g008730 | 54.140 | 314 | 118 | 3 | 8 | 320 | 13 | 301 | 3.15e-113 | 330 |
| MS.gene61508.t1 | MTR_2g008160 | 50.495 | 303 | 148 | 2 | 19 | 320 | 22 | 323 | 1.14e-99 | 296 |
| MS.gene61508.t1 | MTR_4g125940 | 45.912 | 318 | 160 | 5 | 10 | 320 | 17 | 329 | 2.72e-91 | 275 |
| MS.gene61508.t1 | MTR_7g093370 | 45.201 | 323 | 162 | 6 | 7 | 320 | 55 | 371 | 1.88e-89 | 272 |
| MS.gene61508.t1 | MTR_2g028980 | 45.342 | 322 | 162 | 6 | 7 | 320 | 15 | 330 | 1.54e-87 | 266 |
| MS.gene61508.t1 | MTR_2g088770 | 44.164 | 317 | 169 | 5 | 8 | 320 | 13 | 325 | 4.31e-86 | 262 |
| MS.gene61508.t1 | MTR_2g029815 | 43.671 | 316 | 166 | 5 | 12 | 320 | 20 | 330 | 5.48e-86 | 262 |
| MS.gene61508.t1 | MTR_1g054205 | 43.082 | 318 | 168 | 5 | 11 | 320 | 14 | 326 | 1.07e-85 | 261 |
| MS.gene61508.t1 | MTR_2g029820 | 42.683 | 328 | 172 | 7 | 3 | 320 | 9 | 330 | 3.33e-85 | 261 |
| MS.gene61508.t1 | MTR_2g084080 | 43.533 | 317 | 162 | 5 | 9 | 320 | 13 | 317 | 8.61e-84 | 256 |
| MS.gene61508.t1 | MTR_4g046713 | 42.812 | 320 | 171 | 5 | 8 | 320 | 12 | 326 | 1.74e-83 | 255 |
| MS.gene61508.t1 | MTR_2g040000 | 44.136 | 324 | 168 | 5 | 5 | 320 | 13 | 331 | 2.00e-83 | 255 |
| MS.gene61508.t1 | MTR_3g092990 | 44.828 | 319 | 165 | 6 | 8 | 320 | 13 | 326 | 2.38e-83 | 255 |
| MS.gene61508.t1 | MTR_0155s0040 | 43.252 | 326 | 164 | 8 | 2 | 320 | 4 | 315 | 4.39e-83 | 254 |
| MS.gene61508.t1 | MTR_2g029830 | 43.730 | 311 | 161 | 6 | 18 | 320 | 25 | 329 | 1.02e-82 | 254 |
| MS.gene61508.t1 | MTR_2g029860 | 43.548 | 310 | 163 | 6 | 18 | 320 | 26 | 330 | 3.08e-82 | 253 |
| MS.gene61508.t1 | MTR_5g017850 | 42.453 | 318 | 173 | 4 | 8 | 320 | 14 | 326 | 7.65e-82 | 251 |
| MS.gene61508.t1 | MTR_4g125940 | 47.653 | 277 | 133 | 5 | 51 | 320 | 3 | 274 | 1.41e-81 | 248 |
| MS.gene61508.t1 | MTR_2g029850 | 42.727 | 330 | 172 | 7 | 3 | 320 | 6 | 330 | 1.99e-81 | 251 |
| MS.gene61508.t1 | MTR_2g029800 | 40.909 | 330 | 178 | 7 | 3 | 320 | 6 | 330 | 2.12e-81 | 251 |
| MS.gene61508.t1 | MTR_5g017860 | 42.453 | 318 | 173 | 4 | 8 | 320 | 14 | 326 | 2.29e-81 | 250 |
| MS.gene61508.t1 | MTR_5g022870 | 41.358 | 324 | 176 | 6 | 1 | 320 | 3 | 316 | 4.56e-81 | 249 |
| MS.gene61508.t1 | MTR_2g008160 | 43.894 | 303 | 133 | 2 | 19 | 320 | 22 | 288 | 6.60e-81 | 247 |
| MS.gene61508.t1 | MTR_7g086820 | 44.590 | 305 | 156 | 5 | 19 | 320 | 18 | 312 | 7.04e-81 | 248 |
| MS.gene61508.t1 | MTR_3g094650 | 42.638 | 326 | 167 | 8 | 3 | 320 | 9 | 322 | 1.09e-80 | 248 |
| MS.gene61508.t1 | MTR_7g107520 | 41.121 | 321 | 176 | 5 | 5 | 320 | 8 | 320 | 1.27e-80 | 248 |
| MS.gene61508.t1 | MTR_2g084110 | 42.462 | 325 | 168 | 6 | 1 | 320 | 7 | 317 | 1.71e-80 | 247 |
| MS.gene61508.t1 | MTR_2g029560 | 43.042 | 309 | 164 | 6 | 19 | 320 | 22 | 325 | 3.20e-80 | 247 |
| MS.gene61508.t1 | MTR_2g029730 | 42.122 | 311 | 164 | 6 | 19 | 320 | 23 | 326 | 5.52e-78 | 242 |
| MS.gene61508.t1 | MTR_2g029750 | 42.581 | 310 | 166 | 5 | 18 | 320 | 26 | 330 | 5.69e-78 | 242 |
| MS.gene61508.t1 | MTR_1g086320 | 42.169 | 332 | 174 | 7 | 2 | 320 | 7 | 333 | 5.75e-78 | 241 |
| MS.gene61508.t1 | MTR_1g038680 | 42.765 | 311 | 158 | 7 | 22 | 320 | 30 | 332 | 1.13e-77 | 241 |
| MS.gene61508.t1 | MTR_1g025980 | 41.214 | 313 | 171 | 5 | 8 | 316 | 11 | 314 | 2.25e-77 | 239 |
| MS.gene61508.t1 | MTR_6g027440 | 45.098 | 306 | 154 | 6 | 19 | 320 | 19 | 314 | 2.88e-77 | 239 |
| MS.gene61508.t1 | MTR_2g029740 | 42.395 | 309 | 168 | 5 | 18 | 320 | 26 | 330 | 3.00e-77 | 240 |
| MS.gene61508.t1 | MTR_5g021060 | 44.040 | 302 | 158 | 6 | 25 | 320 | 34 | 330 | 4.56e-77 | 239 |
| MS.gene61508.t1 | MTR_2g084020 | 41.411 | 326 | 171 | 7 | 1 | 320 | 7 | 318 | 5.29e-77 | 238 |
| MS.gene61508.t1 | MTR_4g133800 | 41.946 | 298 | 164 | 3 | 24 | 320 | 44 | 333 | 1.83e-76 | 238 |
| MS.gene61508.t1 | MTR_2g084010 | 42.025 | 326 | 169 | 7 | 1 | 320 | 7 | 318 | 3.92e-76 | 236 |
| MS.gene61508.t1 | MTR_2g437770 | 41.066 | 319 | 175 | 4 | 6 | 320 | 32 | 341 | 6.27e-76 | 236 |
| MS.gene61508.t1 | MTR_5g083860 | 42.056 | 321 | 167 | 7 | 7 | 320 | 17 | 325 | 6.49e-76 | 236 |
| MS.gene61508.t1 | MTR_2g084090 | 42.453 | 318 | 165 | 6 | 9 | 320 | 13 | 318 | 7.93e-76 | 235 |
| MS.gene61508.t1 | MTR_4g029200 | 40.308 | 325 | 177 | 5 | 1 | 320 | 26 | 338 | 1.23e-75 | 235 |
| MS.gene61508.t1 | MTR_1g086490 | 41.056 | 341 | 172 | 8 | 2 | 320 | 7 | 340 | 2.11e-75 | 235 |
| MS.gene61508.t1 | MTR_3g094670 | 43.789 | 322 | 161 | 8 | 7 | 320 | 13 | 322 | 2.24e-75 | 234 |
| MS.gene61508.t1 | MTR_8g075100 | 42.208 | 308 | 156 | 6 | 21 | 320 | 26 | 319 | 5.03e-75 | 233 |
| MS.gene61508.t1 | MTR_4g083710 | 41.463 | 328 | 171 | 9 | 3 | 320 | 8 | 324 | 6.11e-75 | 233 |
| MS.gene61508.t1 | MTR_3g094630 | 43.478 | 322 | 162 | 8 | 7 | 320 | 13 | 322 | 1.56e-74 | 232 |
| MS.gene61508.t1 | MTR_7g072480 | 39.198 | 324 | 180 | 5 | 2 | 320 | 5 | 316 | 1.65e-74 | 232 |
| MS.gene61508.t1 | MTR_2g029910 | 40.483 | 331 | 179 | 8 | 3 | 320 | 7 | 332 | 6.40e-74 | 231 |
| MS.gene61508.t1 | MTR_7g086870 | 44.079 | 304 | 152 | 6 | 21 | 320 | 22 | 311 | 9.71e-74 | 230 |
| MS.gene61508.t1 | MTR_1g101830 | 40.328 | 305 | 172 | 4 | 19 | 320 | 25 | 322 | 1.08e-73 | 230 |
| MS.gene61508.t1 | MTR_2g084000 | 39.688 | 320 | 175 | 6 | 7 | 320 | 12 | 319 | 2.76e-73 | 229 |
| MS.gene61508.t1 | MTR_7g029030 | 41.503 | 306 | 165 | 5 | 20 | 320 | 24 | 320 | 5.61e-73 | 228 |
| MS.gene61508.t1 | MTR_2g067440 | 38.253 | 332 | 169 | 6 | 19 | 318 | 58 | 385 | 6.03e-73 | 230 |
| MS.gene61508.t1 | MTR_8g076820 | 42.444 | 311 | 168 | 6 | 16 | 320 | 25 | 330 | 1.38e-72 | 228 |
| MS.gene61508.t1 | MTR_7g072510 | 39.748 | 317 | 174 | 5 | 9 | 320 | 8 | 312 | 2.60e-72 | 226 |
| MS.gene61508.t1 | MTR_1g115900 | 40.938 | 320 | 170 | 7 | 8 | 320 | 14 | 321 | 3.39e-72 | 226 |
| MS.gene61508.t1 | MTR_5g016010 | 40.673 | 327 | 177 | 7 | 1 | 317 | 7 | 326 | 4.19e-72 | 226 |
| MS.gene61508.t1 | MTR_4g122640 | 42.484 | 306 | 163 | 6 | 21 | 320 | 38 | 336 | 5.97e-72 | 226 |
| MS.gene61508.t1 | MTR_4g127670 | 42.157 | 306 | 167 | 4 | 20 | 320 | 23 | 323 | 6.77e-72 | 225 |
| MS.gene61508.t1 | MTR_1g009750 | 39.198 | 324 | 184 | 6 | 5 | 320 | 10 | 328 | 1.14e-71 | 225 |
| MS.gene61508.t1 | MTR_2g078610 | 38.507 | 335 | 167 | 5 | 19 | 318 | 74 | 404 | 1.76e-71 | 227 |
| MS.gene61508.t1 | MTR_3g092990 | 42.633 | 319 | 161 | 7 | 8 | 320 | 13 | 315 | 1.92e-71 | 224 |
| MS.gene61508.t1 | MTR_3g466200 | 40.498 | 321 | 171 | 7 | 8 | 320 | 12 | 320 | 1.93e-71 | 224 |
| MS.gene61508.t1 | MTR_1g090760 | 38.580 | 324 | 183 | 6 | 8 | 320 | 12 | 330 | 1.93e-71 | 224 |
| MS.gene61508.t1 | MTR_4g029190 | 39.275 | 331 | 179 | 8 | 2 | 320 | 20 | 340 | 4.88e-71 | 224 |
| MS.gene61508.t1 | MTR_3g072190 | 40.968 | 310 | 166 | 5 | 16 | 320 | 21 | 318 | 9.18e-71 | 222 |
| MS.gene61508.t1 | MTR_4g029170 | 40.187 | 321 | 173 | 6 | 7 | 320 | 13 | 321 | 2.28e-70 | 221 |
| MS.gene61508.t1 | MTR_2g099175 | 41.042 | 307 | 169 | 5 | 20 | 320 | 35 | 335 | 4.48e-70 | 221 |
| MS.gene61508.t1 | MTR_4g074995 | 40.673 | 327 | 162 | 10 | 3 | 320 | 5 | 308 | 5.31e-70 | 220 |
| MS.gene61508.t1 | MTR_2g077990 | 37.202 | 336 | 172 | 4 | 19 | 319 | 74 | 405 | 7.07e-70 | 223 |
| MS.gene61508.t1 | MTR_5g074970 | 39.550 | 311 | 167 | 6 | 19 | 320 | 28 | 326 | 1.44e-69 | 219 |
| MS.gene61508.t1 | MTR_1g077000 | 38.944 | 303 | 168 | 4 | 21 | 320 | 39 | 327 | 2.89e-69 | 219 |
| MS.gene61508.t1 | MTR_4g095450 | 39.385 | 325 | 179 | 6 | 1 | 317 | 7 | 321 | 8.71e-69 | 218 |
| MS.gene61508.t1 | MTR_5g049280 | 40.385 | 312 | 169 | 9 | 20 | 320 | 32 | 337 | 1.04e-68 | 218 |
| MS.gene61508.t1 | MTR_4g087965 | 41.401 | 314 | 169 | 6 | 14 | 317 | 35 | 343 | 2.69e-68 | 217 |
| MS.gene61508.t1 | MTR_5g014100 | 41.304 | 322 | 169 | 8 | 12 | 320 | 17 | 331 | 3.12e-68 | 216 |
| MS.gene61508.t1 | MTR_8g062780 | 41.433 | 321 | 176 | 5 | 7 | 320 | 9 | 324 | 4.60e-68 | 216 |
| MS.gene61508.t1 | MTR_6g043240 | 41.391 | 302 | 163 | 5 | 21 | 320 | 42 | 331 | 3.12e-67 | 214 |
| MS.gene61508.t1 | MTR_2g078280 | 37.771 | 323 | 162 | 4 | 19 | 306 | 74 | 392 | 1.30e-66 | 214 |
| MS.gene61508.t1 | MTR_4g029180 | 39.934 | 303 | 163 | 6 | 25 | 320 | 31 | 321 | 4.38e-66 | 210 |
| MS.gene61508.t1 | MTR_4g074990 | 39.564 | 321 | 160 | 9 | 8 | 320 | 11 | 305 | 5.31e-66 | 209 |
| MS.gene61508.t1 | MTR_1g022970 | 42.997 | 307 | 163 | 6 | 21 | 320 | 46 | 347 | 1.37e-65 | 210 |
| MS.gene61508.t1 | MTR_3g466180 | 39.937 | 318 | 174 | 5 | 8 | 320 | 18 | 323 | 1.52e-65 | 209 |
| MS.gene61508.t1 | MTR_2g029830 | 42.966 | 263 | 136 | 6 | 66 | 320 | 5 | 261 | 4.48e-65 | 207 |
| MS.gene61508.t1 | MTR_0147s0010 | 38.820 | 322 | 161 | 8 | 18 | 318 | 74 | 380 | 9.48e-65 | 209 |
| MS.gene61508.t1 | MTR_4g030890 | 39.355 | 310 | 171 | 6 | 18 | 320 | 97 | 396 | 1.42e-64 | 209 |
| MS.gene61508.t1 | MTR_4g031140 | 37.864 | 309 | 179 | 6 | 17 | 320 | 24 | 324 | 3.18e-64 | 206 |
| MS.gene61508.t1 | MTR_5g074860 | 39.441 | 322 | 171 | 11 | 8 | 318 | 15 | 323 | 2.68e-63 | 203 |
| MS.gene61508.t1 | MTR_3g105790 | 38.994 | 318 | 180 | 5 | 9 | 320 | 13 | 322 | 1.03e-62 | 202 |
| MS.gene61508.t1 | MTR_7g026990 | 39.535 | 301 | 164 | 7 | 25 | 320 | 35 | 322 | 1.13e-62 | 202 |
| MS.gene61508.t1 | MTR_4g074980 | 37.231 | 325 | 164 | 9 | 1 | 320 | 5 | 294 | 2.55e-62 | 200 |
| MS.gene61508.t1 | MTR_2g067450 | 38.636 | 308 | 173 | 7 | 19 | 318 | 9 | 308 | 1.89e-61 | 198 |
| MS.gene61508.t1 | MTR_3g467600 | 38.973 | 331 | 177 | 9 | 3 | 320 | 6 | 324 | 8.95e-61 | 197 |
| MS.gene61508.t1 | MTR_4g074980 | 41.569 | 255 | 135 | 6 | 1 | 247 | 5 | 253 | 1.38e-60 | 194 |
| MS.gene61508.t1 | MTR_5g074760 | 38.462 | 312 | 169 | 9 | 19 | 320 | 23 | 321 | 1.10e-59 | 194 |
| MS.gene61508.t1 | MTR_5g074710 | 38.782 | 312 | 168 | 9 | 19 | 320 | 23 | 321 | 1.26e-59 | 194 |
| MS.gene61508.t1 | MTR_6g043280 | 37.540 | 309 | 177 | 6 | 16 | 320 | 36 | 332 | 1.90e-59 | 194 |
| MS.gene61508.t1 | MTR_4g132490 | 37.879 | 330 | 185 | 8 | 2 | 320 | 7 | 327 | 2.17e-59 | 193 |
| MS.gene61508.t1 | MTR_6g043460 | 38.870 | 301 | 167 | 5 | 21 | 316 | 36 | 324 | 2.55e-59 | 194 |
| MS.gene61508.t1 | MTR_1g009750 | 35.714 | 322 | 181 | 7 | 5 | 320 | 10 | 311 | 2.56e-59 | 192 |
| MS.gene61508.t1 | MTR_5g033470 | 38.658 | 313 | 175 | 8 | 19 | 320 | 71 | 377 | 2.81e-59 | 194 |
| MS.gene61508.t1 | MTR_5g074740 | 39.423 | 312 | 166 | 9 | 19 | 320 | 23 | 321 | 9.62e-59 | 191 |
| MS.gene61508.t1 | MTR_2g008160 | 48.438 | 192 | 88 | 2 | 18 | 208 | 21 | 202 | 9.25e-56 | 180 |
| MS.gene61508.t1 | MTR_3g072190 | 39.695 | 262 | 141 | 5 | 64 | 320 | 2 | 251 | 1.28e-53 | 176 |
| MS.gene61508.t1 | MTR_4g132110 | 33.438 | 320 | 196 | 5 | 8 | 320 | 19 | 328 | 4.00e-52 | 175 |
| MS.gene61508.t1 | MTR_4g114220 | 70.079 | 127 | 14 | 2 | 1 | 127 | 1 | 103 | 8.03e-51 | 165 |
| MS.gene61508.t1 | MTR_1g066640 | 32.686 | 309 | 191 | 6 | 19 | 320 | 25 | 323 | 1.58e-50 | 170 |
| MS.gene61508.t1 | MTR_4g132110 | 33.436 | 326 | 195 | 7 | 7 | 320 | 18 | 333 | 3.86e-50 | 170 |
| MS.gene61508.t1 | MTR_0286s0010 | 34.472 | 322 | 189 | 9 | 11 | 320 | 23 | 334 | 6.49e-50 | 169 |
| MS.gene61508.t1 | MTR_6g008075 | 34.472 | 322 | 189 | 9 | 11 | 320 | 23 | 334 | 6.49e-50 | 169 |
| MS.gene61508.t1 | MTR_1g066710 | 31.392 | 309 | 195 | 5 | 19 | 320 | 25 | 323 | 8.26e-50 | 169 |
| MS.gene61508.t1 | MTR_1g066680 | 32.686 | 309 | 190 | 6 | 19 | 320 | 25 | 322 | 2.60e-49 | 167 |
| MS.gene61508.t1 | MTR_1g066380 | 33.333 | 309 | 189 | 6 | 19 | 320 | 25 | 323 | 7.57e-49 | 166 |
| MS.gene61508.t1 | MTR_5g074860 | 33.540 | 322 | 151 | 12 | 8 | 318 | 15 | 284 | 8.78e-45 | 154 |
| MS.gene61508.t1 | MTR_3g105790 | 36.614 | 254 | 147 | 5 | 73 | 320 | 1 | 246 | 2.58e-39 | 139 |
| MS.gene61508.t1 | MTR_1g066380 | 31.939 | 263 | 162 | 6 | 65 | 320 | 3 | 255 | 3.87e-34 | 125 |
| MS.gene61508.t1 | MTR_2g077980 | 29.749 | 279 | 155 | 6 | 78 | 319 | 9 | 283 | 9.96e-32 | 120 |
| MS.gene61508.t1 | MTR_3g072260 | 50.000 | 126 | 54 | 3 | 8 | 124 | 8 | 133 | 1.40e-31 | 115 |
| MS.gene61508.t1 | MTR_5g074700 | 36.596 | 235 | 120 | 8 | 90 | 320 | 5 | 214 | 1.98e-31 | 117 |
| MS.gene61508.t1 | MTR_2g078560 | 29.167 | 288 | 152 | 6 | 80 | 319 | 36 | 319 | 3.11e-29 | 114 |
| MS.gene61508.t1 | MTR_7g086790 | 36.559 | 186 | 95 | 4 | 68 | 250 | 17 | 182 | 5.36e-29 | 110 |
| MS.gene61508.t1 | MTR_6g048160 | 70.149 | 67 | 20 | 0 | 60 | 126 | 22 | 88 | 5.87e-29 | 107 |
| MS.gene61508.t1 | MTR_2g029880 | 36.041 | 197 | 108 | 6 | 127 | 320 | 7 | 188 | 1.12e-28 | 110 |
| MS.gene61508.t1 | MTR_7g072490 | 31.349 | 252 | 104 | 7 | 66 | 313 | 1 | 187 | 4.77e-27 | 105 |
| MS.gene61508.t1 | MTR_3g072210 | 34.872 | 195 | 112 | 5 | 129 | 320 | 56 | 238 | 1.03e-24 | 100 |
| MS.gene61508.t1 | MTR_7g086810 | 41.525 | 118 | 47 | 1 | 19 | 136 | 4 | 99 | 5.01e-23 | 95.9 |
| MS.gene61508.t1 | MTR_1g089005 | 42.857 | 112 | 55 | 2 | 21 | 123 | 15 | 126 | 3.88e-22 | 91.3 |
| MS.gene61508.t1 | MTR_5g058120 | 31.928 | 166 | 97 | 3 | 151 | 316 | 6 | 155 | 5.85e-18 | 82.4 |
| MS.gene61508.t1 | MTR_4g012865 | 54.386 | 57 | 26 | 0 | 18 | 74 | 74 | 130 | 1.53e-15 | 73.2 |
| MS.gene61508.t1 | MTR_3g462850 | 31.690 | 142 | 85 | 6 | 181 | 316 | 10 | 145 | 2.16e-14 | 70.1 |
| MS.gene61508.t1 | MTR_7g086785 | 33.333 | 138 | 82 | 3 | 64 | 194 | 1 | 135 | 5.56e-14 | 68.6 |
| MS.gene61508.t1 | MTR_3g107060 | 37.063 | 143 | 73 | 6 | 52 | 186 | 105 | 238 | 1.46e-12 | 67.8 |
| MS.gene61508.t1 | MTR_6g071110 | 39.216 | 102 | 46 | 3 | 75 | 171 | 71 | 161 | 2.79e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61508.t1 | AT2G41480 | 72.930 | 314 | 84 | 1 | 8 | 320 | 15 | 328 | 1.18e-175 | 489 |
| MS.gene61508.t1 | AT5G64120 | 57.475 | 301 | 118 | 3 | 22 | 320 | 36 | 328 | 6.04e-123 | 356 |
| MS.gene61508.t1 | AT5G39580 | 53.797 | 316 | 136 | 6 | 8 | 320 | 11 | 319 | 3.29e-118 | 343 |
| MS.gene61508.t1 | AT5G64110 | 53.289 | 304 | 129 | 3 | 22 | 320 | 35 | 330 | 1.07e-111 | 327 |
| MS.gene61508.t1 | AT4G25980 | 50.165 | 303 | 150 | 1 | 19 | 320 | 24 | 326 | 1.52e-107 | 317 |
| MS.gene61508.t1 | AT5G64100 | 53.872 | 297 | 132 | 3 | 24 | 320 | 40 | 331 | 9.84e-105 | 310 |
| MS.gene61508.t1 | AT5G17820 | 45.597 | 318 | 162 | 4 | 4 | 320 | 6 | 313 | 5.84e-95 | 284 |
| MS.gene61508.t1 | AT5G17820 | 45.597 | 318 | 162 | 4 | 4 | 320 | 59 | 366 | 8.09e-94 | 283 |
| MS.gene61508.t1 | AT1G77100 | 48.197 | 305 | 148 | 4 | 19 | 320 | 22 | 319 | 1.60e-90 | 273 |
| MS.gene61508.t1 | AT1G05260 | 47.078 | 308 | 155 | 5 | 17 | 320 | 22 | 325 | 1.33e-88 | 268 |
| MS.gene61508.t1 | AT5G06720 | 43.344 | 323 | 169 | 6 | 7 | 320 | 16 | 333 | 5.26e-88 | 267 |
| MS.gene61508.t1 | AT5G06730 | 44.582 | 323 | 165 | 7 | 7 | 320 | 17 | 334 | 2.97e-87 | 266 |
| MS.gene61508.t1 | AT1G05240 | 45.333 | 300 | 158 | 4 | 21 | 317 | 26 | 322 | 6.69e-87 | 264 |
| MS.gene61508.t1 | AT1G05250 | 45.333 | 300 | 158 | 4 | 21 | 317 | 26 | 322 | 6.69e-87 | 264 |
| MS.gene61508.t1 | AT4G11290 | 44.923 | 325 | 166 | 5 | 5 | 320 | 6 | 326 | 6.67e-86 | 261 |
| MS.gene61508.t1 | AT5G19890 | 43.034 | 323 | 172 | 4 | 3 | 320 | 12 | 327 | 2.19e-85 | 260 |
| MS.gene61508.t1 | AT3G01190 | 43.574 | 319 | 171 | 6 | 5 | 320 | 9 | 321 | 5.45e-85 | 259 |
| MS.gene61508.t1 | AT3G21770 | 44.089 | 313 | 165 | 5 | 10 | 317 | 18 | 325 | 2.65e-83 | 255 |
| MS.gene61508.t1 | AT5G42180 | 41.433 | 321 | 174 | 6 | 2 | 318 | 5 | 315 | 5.21e-82 | 251 |
| MS.gene61508.t1 | AT5G05340 | 45.192 | 312 | 150 | 7 | 17 | 320 | 26 | 324 | 3.33e-81 | 249 |
| MS.gene61508.t1 | AT3G03670 | 44.954 | 327 | 164 | 6 | 2 | 320 | 3 | 321 | 3.81e-81 | 249 |
| MS.gene61508.t1 | AT4G36430 | 44.481 | 308 | 160 | 6 | 19 | 320 | 28 | 330 | 3.00e-80 | 247 |
| MS.gene61508.t1 | AT2G38390 | 41.693 | 319 | 173 | 6 | 10 | 320 | 20 | 333 | 4.00e-79 | 245 |
| MS.gene61508.t1 | AT5G22410 | 41.768 | 328 | 172 | 6 | 1 | 316 | 1 | 321 | 4.40e-79 | 244 |
| MS.gene61508.t1 | AT1G49570 | 44.984 | 309 | 155 | 7 | 17 | 316 | 44 | 346 | 1.35e-78 | 243 |
| MS.gene61508.t1 | AT5G15180 | 43.092 | 304 | 163 | 5 | 21 | 320 | 32 | 329 | 1.49e-78 | 243 |
| MS.gene61508.t1 | AT2G38380 | 41.693 | 319 | 173 | 6 | 10 | 320 | 20 | 333 | 2.49e-77 | 240 |
| MS.gene61508.t1 | AT4G30170 | 44.660 | 309 | 160 | 6 | 17 | 320 | 23 | 325 | 2.79e-77 | 239 |
| MS.gene61508.t1 | AT3G50990 | 42.532 | 308 | 166 | 6 | 19 | 320 | 39 | 341 | 3.20e-77 | 240 |
| MS.gene61508.t1 | AT2G18150 | 42.904 | 303 | 162 | 5 | 24 | 320 | 39 | 336 | 3.22e-77 | 239 |
| MS.gene61508.t1 | AT5G19880 | 40.549 | 328 | 180 | 6 | 3 | 320 | 7 | 329 | 5.18e-77 | 239 |
| MS.gene61508.t1 | AT2G18140 | 42.715 | 302 | 162 | 5 | 25 | 320 | 39 | 335 | 2.34e-76 | 237 |
| MS.gene61508.t1 | AT3G32980 | 41.158 | 311 | 169 | 6 | 19 | 320 | 29 | 334 | 2.66e-76 | 238 |
| MS.gene61508.t1 | AT1G14550 | 42.368 | 321 | 166 | 7 | 8 | 320 | 12 | 321 | 3.29e-76 | 236 |
| MS.gene61508.t1 | AT4G08770 | 41.987 | 312 | 167 | 7 | 18 | 320 | 21 | 327 | 5.65e-76 | 237 |
| MS.gene61508.t1 | AT4G37530 | 41.613 | 310 | 168 | 5 | 19 | 320 | 25 | 329 | 7.67e-76 | 236 |
| MS.gene61508.t1 | AT4G33870 | 38.348 | 339 | 165 | 5 | 19 | 318 | 66 | 399 | 1.48e-75 | 238 |
| MS.gene61508.t1 | AT5G66390 | 42.384 | 302 | 163 | 5 | 25 | 320 | 37 | 333 | 1.49e-75 | 235 |
| MS.gene61508.t1 | AT5G24070 | 41.806 | 299 | 163 | 3 | 27 | 320 | 43 | 335 | 1.81e-75 | 235 |
| MS.gene61508.t1 | AT4G08780 | 42.628 | 312 | 165 | 8 | 18 | 320 | 21 | 327 | 4.22e-75 | 234 |
| MS.gene61508.t1 | AT5G39580 | 57.143 | 189 | 80 | 1 | 8 | 195 | 11 | 199 | 6.59e-75 | 230 |
| MS.gene61508.t1 | AT4G16270 | 44.771 | 306 | 156 | 6 | 21 | 320 | 50 | 348 | 7.20e-75 | 234 |
| MS.gene61508.t1 | AT3G49110 | 41.346 | 312 | 169 | 6 | 18 | 320 | 30 | 336 | 9.99e-75 | 234 |
| MS.gene61508.t1 | AT5G51890 | 40.645 | 310 | 173 | 4 | 8 | 313 | 13 | 315 | 2.96e-74 | 231 |
| MS.gene61508.t1 | AT4G26010 | 42.157 | 306 | 157 | 6 | 19 | 320 | 48 | 337 | 8.26e-74 | 231 |
| MS.gene61508.t1 | AT4G26010 | 42.157 | 306 | 157 | 6 | 19 | 320 | 20 | 309 | 8.50e-74 | 230 |
| MS.gene61508.t1 | AT2G18980 | 41.509 | 318 | 177 | 4 | 7 | 320 | 11 | 323 | 2.30e-73 | 229 |
| MS.gene61508.t1 | AT5G14130 | 40.491 | 326 | 181 | 6 | 1 | 320 | 12 | 330 | 7.66e-73 | 228 |
| MS.gene61508.t1 | AT1G14540 | 40.187 | 321 | 171 | 7 | 10 | 320 | 6 | 315 | 1.59e-72 | 227 |
| MS.gene61508.t1 | AT5G14130 | 40.491 | 326 | 181 | 6 | 1 | 320 | 53 | 371 | 2.00e-72 | 228 |
| MS.gene61508.t1 | AT4G37520 | 40.323 | 310 | 172 | 5 | 19 | 320 | 25 | 329 | 4.02e-72 | 226 |
| MS.gene61508.t1 | AT1G44970 | 43.042 | 309 | 164 | 5 | 19 | 320 | 43 | 346 | 5.26e-72 | 226 |
| MS.gene61508.t1 | AT3G49120 | 40.193 | 311 | 172 | 6 | 19 | 320 | 30 | 335 | 5.78e-72 | 226 |
| MS.gene61508.t1 | AT5G67400 | 39.634 | 328 | 185 | 5 | 1 | 320 | 7 | 329 | 2.66e-71 | 224 |
| MS.gene61508.t1 | AT2G43480 | 40.940 | 298 | 165 | 4 | 28 | 320 | 44 | 335 | 9.43e-71 | 223 |
| MS.gene61508.t1 | AT4G31760 | 40.063 | 317 | 180 | 4 | 8 | 320 | 16 | 326 | 1.08e-70 | 223 |
| MS.gene61508.t1 | AT2G24800 | 42.020 | 307 | 167 | 6 | 19 | 320 | 29 | 329 | 3.47e-70 | 221 |
| MS.gene61508.t1 | AT1G71695 | 42.208 | 308 | 158 | 8 | 21 | 320 | 44 | 339 | 6.74e-70 | 221 |
| MS.gene61508.t1 | AT1G68850 | 38.782 | 312 | 173 | 10 | 21 | 320 | 30 | 335 | 8.69e-70 | 220 |
| MS.gene61508.t1 | AT4G33420 | 38.390 | 323 | 181 | 5 | 2 | 320 | 17 | 325 | 4.12e-69 | 218 |
| MS.gene61508.t1 | AT2G39040 | 43.175 | 315 | 156 | 8 | 20 | 320 | 45 | 350 | 4.44e-69 | 219 |
| MS.gene61508.t1 | AT4G37520 | 39.677 | 310 | 171 | 6 | 19 | 320 | 25 | 326 | 9.64e-69 | 218 |
| MS.gene61508.t1 | AT4G33420 | 38.390 | 323 | 181 | 5 | 2 | 320 | 64 | 372 | 1.52e-68 | 218 |
| MS.gene61508.t1 | AT5G58400 | 41.121 | 321 | 169 | 7 | 8 | 320 | 17 | 325 | 2.92e-67 | 214 |
| MS.gene61508.t1 | AT3G49960 | 38.629 | 321 | 184 | 5 | 8 | 320 | 14 | 329 | 6.64e-66 | 210 |
| MS.gene61508.t1 | AT1G30870 | 40.397 | 302 | 171 | 3 | 21 | 320 | 51 | 345 | 3.08e-65 | 209 |
| MS.gene61508.t1 | AT5G58390 | 38.820 | 322 | 175 | 7 | 8 | 320 | 8 | 316 | 3.43e-65 | 208 |
| MS.gene61508.t1 | AT4G37530 | 42.023 | 257 | 141 | 4 | 19 | 267 | 25 | 281 | 1.07e-64 | 206 |
| MS.gene61508.t1 | AT4G17690 | 40.909 | 308 | 163 | 7 | 21 | 320 | 26 | 322 | 9.73e-63 | 202 |
| MS.gene61508.t1 | AT2G22420 | 37.462 | 331 | 178 | 10 | 1 | 320 | 7 | 319 | 6.18e-62 | 200 |
| MS.gene61508.t1 | AT5G47000 | 40.968 | 310 | 165 | 7 | 19 | 320 | 31 | 330 | 8.52e-62 | 200 |
| MS.gene61508.t1 | AT2G35380 | 37.609 | 343 | 174 | 8 | 3 | 320 | 8 | 335 | 6.23e-61 | 197 |
| MS.gene61508.t1 | AT2G34060 | 39.423 | 312 | 174 | 6 | 18 | 319 | 39 | 345 | 3.16e-60 | 196 |
| MS.gene61508.t1 | AT1G34510 | 35.647 | 317 | 184 | 6 | 8 | 320 | 9 | 309 | 3.46e-60 | 195 |
| MS.gene61508.t1 | AT3G28200 | 39.550 | 311 | 166 | 8 | 19 | 320 | 19 | 316 | 1.41e-59 | 194 |
| MS.gene61508.t1 | AT5G40150 | 38.413 | 315 | 177 | 6 | 13 | 320 | 24 | 328 | 3.56e-58 | 190 |
| MS.gene61508.t1 | AT4G25980 | 53.012 | 166 | 77 | 1 | 19 | 183 | 69 | 234 | 5.88e-58 | 188 |
| MS.gene61508.t1 | AT1G24110 | 36.334 | 311 | 185 | 7 | 17 | 320 | 18 | 322 | 9.89e-55 | 181 |
| MS.gene61508.t1 | AT4G21960 | 33.837 | 331 | 198 | 6 | 1 | 320 | 7 | 327 | 2.17e-53 | 178 |
| MS.gene61508.t1 | AT3G17070 | 34.756 | 328 | 201 | 5 | 1 | 320 | 17 | 339 | 2.55e-51 | 173 |
| MS.gene61508.t1 | AT2G24800 | 47.692 | 195 | 99 | 2 | 19 | 210 | 29 | 223 | 4.85e-49 | 164 |
| MS.gene61508.t1 | AT2G37130 | 31.833 | 311 | 194 | 6 | 18 | 320 | 27 | 327 | 1.78e-44 | 155 |
| MS.gene61508.t1 | AT2G37130 | 31.803 | 305 | 190 | 6 | 24 | 320 | 2 | 296 | 5.92e-43 | 150 |
| MS.gene61508.t1 | AT2G35380 | 35.769 | 260 | 134 | 6 | 79 | 320 | 3 | 247 | 3.87e-39 | 139 |
| MS.gene61508.t1 | AT3G17070 | 32.975 | 279 | 174 | 5 | 49 | 320 | 4 | 276 | 1.06e-34 | 127 |
| MS.gene61508.t1 | AT4G32320 | 31.959 | 194 | 104 | 8 | 1 | 186 | 74 | 247 | 9.54e-13 | 68.6 |
| MS.gene61508.t1 | AT4G35970 | 32.990 | 194 | 102 | 8 | 52 | 236 | 30 | 204 | 3.20e-11 | 62.8 |
| MS.gene61508.t1 | AT4G35970 | 32.990 | 194 | 102 | 8 | 52 | 236 | 30 | 204 | 5.42e-11 | 62.8 |
Find 80 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAGCTCCCTAGTGATTT+TGG | 0.184639 | 8.3:+13143655 | MS.gene61508:CDS |
| GAAGAAGCTCACATCAAATT+TGG | 0.185710 | 8.3:-13145125 | None:intergenic |
| CATGACCTTGTTACCTTAGT+TGG | 0.310649 | 8.3:+13144773 | MS.gene61508:CDS |
| GTTAATGCCCAACTGAAAAC+TGG | 0.335655 | 8.3:+13143692 | MS.gene61508:CDS |
| GTCATGATCATTTAGACCTT+TGG | 0.338230 | 8.3:-13144756 | None:intergenic |
| GTCAGCACATGATACAATTC+CGG | 0.344053 | 8.3:-13144451 | None:intergenic |
| CCTGTGGGTACTGGCCAACT+TGG | 0.362353 | 8.3:-13144641 | None:intergenic |
| AAAATGTACGCGATGGTAAC+GGG | 0.363658 | 8.3:+13145149 | MS.gene61508:CDS |
| TTGGACATATTGCTTTAAGC+TGG | 0.375950 | 8.3:-13145054 | None:intergenic |
| TCAGCACATGATACAATTCC+GGG | 0.378111 | 8.3:-13144450 | None:intergenic |
| TGGTTTGAGAAGGGTGGCTT+TGG | 0.385896 | 8.3:+13145087 | MS.gene61508:CDS |
| AGAAGGGTAGTGGAAAATTA+TGG | 0.391569 | 8.3:+13145214 | MS.gene61508:CDS |
| CTCAACTTAATCATAGCCTT+TGG | 0.393832 | 8.3:-13145283 | None:intergenic |
| AAGAAAGCTTGGTTTATAGT+AGG | 0.408204 | 8.3:-13145028 | None:intergenic |
| TGATACAATTCCGGGGCATA+TGG | 0.419332 | 8.3:-13144442 | None:intergenic |
| TAAAGAACCTGCAATCTGTT+TGG | 0.423931 | 8.3:-13144964 | None:intergenic |
| GATGGATCCATATTGATTGC+AGG | 0.427919 | 8.3:+13144336 | MS.gene61508:CDS |
| AGAGAACCCTGCAATCAATA+TGG | 0.428990 | 8.3:-13144343 | None:intergenic |
| AGCAGGCCAGGGGCAATGCT+TGG | 0.429302 | 8.3:-13143788 | None:intergenic |
| CCATAGGCCAAACAGATTGC+AGG | 0.434490 | 8.3:+13144957 | MS.gene61508:CDS |
| CCTGCAATCTGTTTGGCCTA+TGG | 0.440592 | 8.3:-13144957 | None:intergenic |
| AAACCTCTTAGACCAAGGTT+TGG | 0.444259 | 8.3:-13144384 | None:intergenic |
| AGCTCGTGATGCTGTCGATT+TGG | 0.444423 | 8.3:+13144488 | MS.gene61508:CDS |
| CCACTCCCACAGGGCTGCGA+TGG | 0.456071 | 8.3:+13144318 | MS.gene61508:intron |
| TTACCAAACCTTGGTCTAAG+AGG | 0.466873 | 8.3:+13144381 | MS.gene61508:CDS |
| CAGAATCTTCCCACAGCCTC+TGG | 0.471179 | 8.3:-13145186 | None:intergenic |
| GAAAGAAAGCATACCAACTA+AGG | 0.472579 | 8.3:-13144786 | None:intergenic |
| TAATGCAAAATCACAAATAG+AGG | 0.476452 | 8.3:+13144419 | MS.gene61508:CDS |
| TAAGCTGGGCTAAGAAAGCT+TGG | 0.487188 | 8.3:-13145039 | None:intergenic |
| TAGAGTCAGACCAGAGGCTG+TGG | 0.488491 | 8.3:+13145176 | MS.gene61508:CDS |
| TTCTGCTACAAGAAGGGTAG+TGG | 0.492626 | 8.3:+13145204 | MS.gene61508:CDS |
| AAATGAAGTCTGAGCAGGCC+AGG | 0.493262 | 8.3:-13143800 | None:intergenic |
| TTACTTGGACAAAGCAATCA+TGG | 0.498470 | 8.3:-13143823 | None:intergenic |
| TGGACATATTGCTTTAAGCT+GGG | 0.499771 | 8.3:-13145053 | None:intergenic |
| AAGCTCACATCAAATTTGGC+TGG | 0.500486 | 8.3:-13145121 | None:intergenic |
| CTGTGGGTACTGGCCAACTT+GGG | 0.513908 | 8.3:-13144640 | None:intergenic |
| GATGTGAAGACTGGTATTGA+TGG | 0.514291 | 8.3:+13145313 | MS.gene61508:CDS |
| CATCACGAGCTGCCAATGCT+AGG | 0.522152 | 8.3:-13144476 | None:intergenic |
| CTATACAATTTCACAACCAC+TGG | 0.523097 | 8.3:+13144995 | MS.gene61508:CDS |
| CTTCAAAACCTCTTAGACCA+AGG | 0.526023 | 8.3:-13144389 | None:intergenic |
| GTACCCACAGGAAGAAAAGA+TGG | 0.532051 | 8.3:+13144653 | MS.gene61508:CDS |
| TGGAGATGGTTTGAGAAGGG+TGG | 0.539454 | 8.3:+13145081 | MS.gene61508:CDS |
| AAGTGGAGAAGGCAAGTTTG+AGG | 0.547389 | 8.3:-13144699 | None:intergenic |
| CAAATAGAGGCCATATGCCC+CGG | 0.548083 | 8.3:+13144432 | MS.gene61508:CDS |
| AAATGGAGATGGTTTGAGAA+GGG | 0.551257 | 8.3:+13145078 | MS.gene61508:CDS |
| AATGAAGTCTGAGCAGGCCA+GGG | 0.551799 | 8.3:-13143799 | None:intergenic |
| CGTACGATGGACTCAGCTGT+TGG | 0.556646 | 8.3:-13143734 | None:intergenic |
| AAGTCATAACCAAAATCACT+AGG | 0.559455 | 8.3:-13143664 | None:intergenic |
| ATGTGAAGACTGGTATTGAT+GGG | 0.560319 | 8.3:+13145314 | MS.gene61508:CDS |
| GGGAAGATTCTGCTACAAGA+AGG | 0.565073 | 8.3:+13145197 | MS.gene61508:CDS |
| ATGGATCCATATTGATTGCA+GGG | 0.566998 | 8.3:+13144337 | MS.gene61508:CDS |
| CATGGAAATGAAGTCTGAGC+AGG | 0.568156 | 8.3:-13143805 | None:intergenic |
| GAAACAGGTTCAAGTGGAGA+AGG | 0.576067 | 8.3:-13144710 | None:intergenic |
| AGGGTAGTGGAAAATTATGG+TGG | 0.580987 | 8.3:+13145217 | MS.gene61508:CDS |
| CCAAGTTGGCCAGTACCCAC+AGG | 0.582195 | 8.3:+13144641 | MS.gene61508:CDS |
| TTAATGCCCAACTGAAAACT+GGG | 0.583888 | 8.3:+13143693 | MS.gene61508:CDS |
| AGTAGTGTAGATGTGAAGAC+TGG | 0.587492 | 8.3:+13145304 | MS.gene61508:CDS |
| GACAGAGTGATGGCCCAAGT+TGG | 0.588626 | 8.3:+13144627 | MS.gene61508:intron |
| TGTGAAGGTGCACATACCAT+AGG | 0.589553 | 8.3:+13144941 | MS.gene61508:intron |
| AGGAATGCATTACCAAACCT+TGG | 0.592827 | 8.3:+13144372 | MS.gene61508:CDS |
| ATGTGCTGACATCCTAGCAT+TGG | 0.595121 | 8.3:+13144464 | MS.gene61508:CDS |
| GGAAGATTCTGCTACAAGAA+GGG | 0.607167 | 8.3:+13145198 | MS.gene61508:CDS |
| AAAGATCCAAGCATTGCCCC+TGG | 0.609801 | 8.3:+13143782 | MS.gene61508:CDS |
| AAAATGGAGATGGTTTGAGA+AGG | 0.611494 | 8.3:+13145077 | MS.gene61508:CDS |
| TACAACTGTGGACCGTACGA+TGG | 0.613650 | 8.3:-13143747 | None:intergenic |
| TGGACAGAAACAGGTTCAAG+TGG | 0.615352 | 8.3:-13144716 | None:intergenic |
| CCACAGGAAGAAAAGATGGA+AGG | 0.624116 | 8.3:+13144657 | MS.gene61508:CDS |
| AGAGTCAGACCAGAGGCTGT+GGG | 0.625853 | 8.3:+13145177 | MS.gene61508:CDS |
| GGGTAGTGGAAAATTATGGT+GGG | 0.632267 | 8.3:+13145218 | MS.gene61508:CDS |
| AGTCATAACCAAAATCACTA+GGG | 0.632914 | 8.3:-13143663 | None:intergenic |
| GCATACCAACTAAGGTAACA+AGG | 0.639818 | 8.3:-13144778 | None:intergenic |
| TGTGAAGACTGGTATTGATG+GGG | 0.649530 | 8.3:+13145315 | MS.gene61508:CDS |
| AGTAGGATCAGCATTGCCAG+TGG | 0.663872 | 8.3:-13145011 | None:intergenic |
| CAACAGCTGAGTCCATCGTA+CGG | 0.665514 | 8.3:+13143735 | MS.gene61508:CDS |
| ATGAAGTCTGAGCAGGCCAG+GGG | 0.671069 | 8.3:-13143798 | None:intergenic |
| TTGCAGGGTTCTCTGCAGAG+AGG | 0.693045 | 8.3:+13144352 | MS.gene61508:CDS |
| TCGTGAATATGACAGAGTGA+TGG | 0.695486 | 8.3:+13144617 | MS.gene61508:intron |
| GTTAAAATAAGATACAACTG+TGG | 0.698372 | 8.3:-13143759 | None:intergenic |
| CAGCACATGATACAATTCCG+GGG | 0.723417 | 8.3:-13144449 | None:intergenic |
| GGATTCTAGAGTCAGACCAG+AGG | 0.752589 | 8.3:+13145170 | MS.gene61508:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTTTAAACGAAAT+TGG | + | chr8.3:13144814-13144833 | MS.gene61508:intron | 10.0% |
| !!! | ATGTTTTTCTTTTCTTTTTT+GGG | + | chr8.3:13144007-13144026 | MS.gene61508:intron | 15.0% |
| !!! | TATAGTTTTTTCTTTTACAA+AGG | + | chr8.3:13144037-13144056 | MS.gene61508:intron | 15.0% |
| !!! | TATGTTTTTCTTTTCTTTTT+TGG | + | chr8.3:13144006-13144025 | MS.gene61508:intron | 15.0% |
| !! | ATAAATGTATAGCAAATACT+AGG | - | chr8.3:13144893-13144912 | None:intergenic | 20.0% |
| !!! | ATTTGATTTTGAATTTCCAA+AGG | + | chr8.3:13145267-13145286 | MS.gene61508:CDS | 20.0% |
| !!! | TAATACATTTTTCAACTAAC+AGG | - | chr8.3:13144103-13144122 | None:intergenic | 20.0% |
| ! | AAAGCAATATGTCCAAAAAA+TGG | + | chr8.3:13145061-13145080 | MS.gene61508:CDS | 25.0% |
| ! | GATATACTCGTATAGTTAAT+TGG | - | chr8.3:13144197-13144216 | None:intergenic | 25.0% |
| ! | GTTAAAATAAGATACAACTG+TGG | - | chr8.3:13143762-13143781 | None:intergenic | 25.0% |
| ! | TAAAATTTGAATCTCCTTGA+GGG | + | chr8.3:13144072-13144091 | MS.gene61508:intron | 25.0% |
| ! | TAATGCAAAATCACAAATAG+AGG | + | chr8.3:13144419-13144438 | MS.gene61508:CDS | 25.0% |
| ! | TTAAAATTTGAATCTCCTTG+AGG | + | chr8.3:13144071-13144090 | MS.gene61508:intron | 25.0% |
| !!! | TTTTAGCTTCAACAAAATCA+CGG | - | chr8.3:13143899-13143918 | None:intergenic | 25.0% |
| AAGAAAGCTTGGTTTATAGT+AGG | - | chr8.3:13145031-13145050 | None:intergenic | 30.0% | |
| AAGTCATAACCAAAATCACT+AGG | - | chr8.3:13143667-13143686 | None:intergenic | 30.0% | |
| AGTCATAACCAAAATCACTA+GGG | - | chr8.3:13143666-13143685 | None:intergenic | 30.0% | |
| ATATGTCCAAAAAATGGAGA+TGG | + | chr8.3:13145067-13145086 | MS.gene61508:CDS | 30.0% | |
| TTCACACAAATCAAGAGTTT+AGG | - | chr8.3:13144927-13144946 | None:intergenic | 30.0% | |
| ! | AATAAAACCCAGTTTTCAGT+TGG | - | chr8.3:13143703-13143722 | None:intergenic | 30.0% |
| ! | ATAAAACCCAGTTTTCAGTT+GGG | - | chr8.3:13143702-13143721 | None:intergenic | 30.0% |
| ! | CACACGTGTTAATTTTATCA+TGG | - | chr8.3:13144595-13144614 | None:intergenic | 30.0% |
| ! | CATGTTTTATAGTGCATGTT+TGG | - | chr8.3:13143981-13144000 | None:intergenic | 30.0% |
| !! | AATTATGGTGGGAATTTTAG+AGG | + | chr8.3:13145229-13145248 | MS.gene61508:CDS | 30.0% |
| !! | ATTATGGTGGGAATTTTAGA+GGG | + | chr8.3:13145230-13145249 | MS.gene61508:CDS | 30.0% |
| !! | TAAACTCTTGATTTGTGTGA+AGG | + | chr8.3:13144926-13144945 | MS.gene61508:intron | 30.0% |
| !!! | AGTGATTTTGGTTATGACTT+TGG | + | chr8.3:13143667-13143686 | MS.gene61508:CDS | 30.0% |
| AAAAATGTACGCGATGGTAA+CGG | + | chr8.3:13145148-13145167 | MS.gene61508:CDS | 35.0% | |
| AAAATGGAGATGGTTTGAGA+AGG | + | chr8.3:13145077-13145096 | MS.gene61508:CDS | 35.0% | |
| AAATGGAGATGGTTTGAGAA+GGG | + | chr8.3:13145078-13145097 | MS.gene61508:CDS | 35.0% | |
| AAGTAAGCTAAGTGTATGTC+TGG | + | chr8.3:13143840-13143859 | MS.gene61508:intron | 35.0% | |
| AGACATACACTTAGCTTACT+TGG | - | chr8.3:13143841-13143860 | None:intergenic | 35.0% | |
| CTATACAATTTCACAACCAC+TGG | + | chr8.3:13144995-13145014 | MS.gene61508:CDS | 35.0% | |
| CTCAACTTAATCATAGCCTT+TGG | - | chr8.3:13145286-13145305 | None:intergenic | 35.0% | |
| GAAGAAGCTCACATCAAATT+TGG | - | chr8.3:13145128-13145147 | None:intergenic | 35.0% | |
| GTCATGATCATTTAGACCTT+TGG | - | chr8.3:13144759-13144778 | None:intergenic | 35.0% | |
| TAAAGAACCTGCAATCTGTT+TGG | - | chr8.3:13144967-13144986 | None:intergenic | 35.0% | |
| TTAATGCCCAACTGAAAACT+GGG | + | chr8.3:13143693-13143712 | MS.gene61508:CDS | 35.0% | |
| TTACTTGGACAAAGCAATCA+TGG | - | chr8.3:13143826-13143845 | None:intergenic | 35.0% | |
| TTCTTCAAAAATGTACGCGA+TGG | + | chr8.3:13145142-13145161 | MS.gene61508:CDS | 35.0% | |
| ! | ATGGATCCATATTGATTGCA+GGG | + | chr8.3:13144337-13144356 | MS.gene61508:CDS | 35.0% |
| ! | GAAAGAAAGCATACCAACTA+AGG | - | chr8.3:13144789-13144808 | None:intergenic | 35.0% |
| ! | TGGACATATTGCTTTAAGCT+GGG | - | chr8.3:13145056-13145075 | None:intergenic | 35.0% |
| ! | TTGGACATATTGCTTTAAGC+TGG | - | chr8.3:13145057-13145076 | None:intergenic | 35.0% |
| !! | AGAAGGGTAGTGGAAAATTA+TGG | + | chr8.3:13145214-13145233 | MS.gene61508:CDS | 35.0% |
| !! | ATGTGAAGACTGGTATTGAT+GGG | + | chr8.3:13145314-13145333 | MS.gene61508:CDS | 35.0% |
| !! | GGAATTTTAGAGGGTTATTG+GGG | + | chr8.3:13145239-13145258 | MS.gene61508:CDS | 35.0% |
| !! | GGGAATTTTAGAGGGTTATT+GGG | + | chr8.3:13145238-13145257 | MS.gene61508:CDS | 35.0% |
| !! | TGGGAATTTTAGAGGGTTAT+TGG | + | chr8.3:13145237-13145256 | MS.gene61508:CDS | 35.0% |
| !!! | CTCAAACCATCTCCATTTTT+TGG | - | chr8.3:13145076-13145095 | None:intergenic | 35.0% |
| AAAATGTACGCGATGGTAAC+GGG | + | chr8.3:13145149-13145168 | MS.gene61508:CDS | 40.0% | |
| AAACCTCTTAGACCAAGGTT+TGG | - | chr8.3:13144387-13144406 | None:intergenic | 40.0% | |
| AAGCTCACATCAAATTTGGC+TGG | - | chr8.3:13145124-13145143 | None:intergenic | 40.0% | |
| AGAGAACCCTGCAATCAATA+TGG | - | chr8.3:13144346-13144365 | None:intergenic | 40.0% | |
| AGCTAAGTGTATGTCTGGAT+TGG | + | chr8.3:13143845-13143864 | MS.gene61508:intron | 40.0% | |
| AGGAATGCATTACCAAACCT+TGG | + | chr8.3:13144372-13144391 | MS.gene61508:CDS | 40.0% | |
| AGTAGTGTAGATGTGAAGAC+TGG | + | chr8.3:13145304-13145323 | MS.gene61508:CDS | 40.0% | |
| CATGACCTTGTTACCTTAGT+TGG | + | chr8.3:13144773-13144792 | MS.gene61508:CDS | 40.0% | |
| CTTCAAAACCTCTTAGACCA+AGG | - | chr8.3:13144392-13144411 | None:intergenic | 40.0% | |
| GCATACCAACTAAGGTAACA+AGG | - | chr8.3:13144781-13144800 | None:intergenic | 40.0% | |
| GGAAGATTCTGCTACAAGAA+GGG | + | chr8.3:13145198-13145217 | MS.gene61508:CDS | 40.0% | |
| GTCAGCACATGATACAATTC+CGG | - | chr8.3:13144454-13144473 | None:intergenic | 40.0% | |
| GTTAATGCCCAACTGAAAAC+TGG | + | chr8.3:13143692-13143711 | MS.gene61508:CDS | 40.0% | |
| TAGTGCATGTTTGGATTTCG+CGG | - | chr8.3:13143972-13143991 | None:intergenic | 40.0% | |
| TCAGCACATGATACAATTCC+GGG | - | chr8.3:13144453-13144472 | None:intergenic | 40.0% | |
| TCGTGAATATGACAGAGTGA+TGG | + | chr8.3:13144617-13144636 | MS.gene61508:intron | 40.0% | |
| TTACCAAACCTTGGTCTAAG+AGG | + | chr8.3:13144381-13144400 | MS.gene61508:CDS | 40.0% | |
| ! | ATTGAGCTCCCTAGTGATTT+TGG | + | chr8.3:13143655-13143674 | MS.gene61508:CDS | 40.0% |
| ! | CTTCCATCTTTTCTTCCTGT+GGG | - | chr8.3:13144659-13144678 | None:intergenic | 40.0% |
| ! | GATGGATCCATATTGATTGC+AGG | + | chr8.3:13144336-13144355 | MS.gene61508:CDS | 40.0% |
| ! | GATGTGAAGACTGGTATTGA+TGG | + | chr8.3:13145313-13145332 | MS.gene61508:CDS | 40.0% |
| ! | TAAGTGTATGTCTGGATTGG+CGG | + | chr8.3:13143848-13143867 | MS.gene61508:intron | 40.0% |
| ! | TGGCAGCAAATTTTTGTCGA+TGG | - | chr8.3:13144739-13144758 | None:intergenic | 40.0% |
| ! | TTTTGTCGATGGACAGAAAC+AGG | - | chr8.3:13144728-13144747 | None:intergenic | 40.0% |
| !! | AGGGTAGTGGAAAATTATGG+TGG | + | chr8.3:13145217-13145236 | MS.gene61508:CDS | 40.0% |
| !! | CGACAAAAATTTGCTGCCAA+AGG | + | chr8.3:13144740-13144759 | MS.gene61508:CDS | 40.0% |
| !! | GGGTAGTGGAAAATTATGGT+GGG | + | chr8.3:13145218-13145237 | MS.gene61508:CDS | 40.0% |
| !! | TGTGAAGACTGGTATTGATG+GGG | + | chr8.3:13145315-13145334 | MS.gene61508:CDS | 40.0% |
| AAGTGGAGAAGGCAAGTTTG+AGG | - | chr8.3:13144702-13144721 | None:intergenic | 45.0% | |
| ACTAACAGGTATAGCCCTCA+AGG | - | chr8.3:13144089-13144108 | None:intergenic | 45.0% | |
| CAGCACATGATACAATTCCG+GGG | - | chr8.3:13144452-13144471 | None:intergenic | 45.0% | |
| CATGGAAATGAAGTCTGAGC+AGG | - | chr8.3:13143808-13143827 | None:intergenic | 45.0% | |
| CCACAGGAAGAAAAGATGGA+AGG | + | chr8.3:13144657-13144676 | MS.gene61508:CDS | 45.0% | |
| GAAACAGGTTCAAGTGGAGA+AGG | - | chr8.3:13144713-13144732 | None:intergenic | 45.0% | |
| GGGAAGATTCTGCTACAAGA+AGG | + | chr8.3:13145197-13145216 | MS.gene61508:CDS | 45.0% | |
| GTACCCACAGGAAGAAAAGA+TGG | + | chr8.3:13144653-13144672 | MS.gene61508:CDS | 45.0% | |
| TAAGCTGGGCTAAGAAAGCT+TGG | - | chr8.3:13145042-13145061 | None:intergenic | 45.0% | |
| TGATACAATTCCGGGGCATA+TGG | - | chr8.3:13144445-13144464 | None:intergenic | 45.0% | |
| TGGACAGAAACAGGTTCAAG+TGG | - | chr8.3:13144719-13144738 | None:intergenic | 45.0% | |
| TTCTGCTACAAGAAGGGTAG+TGG | + | chr8.3:13145204-13145223 | MS.gene61508:CDS | 45.0% | |
| ! | ATGTGCTGACATCCTAGCAT+TGG | + | chr8.3:13144464-13144483 | MS.gene61508:CDS | 45.0% |
| ! | CCTTCCATCTTTTCTTCCTG+TGG | - | chr8.3:13144660-13144679 | None:intergenic | 45.0% |
| ! | TCTTTTCTTCCTGTGGGTAC+TGG | - | chr8.3:13144653-13144672 | None:intergenic | 45.0% |
| ! | TGTGAAGGTGCACATACCAT+AGG | + | chr8.3:13144941-13144960 | MS.gene61508:intron | 45.0% |
| AAATGAAGTCTGAGCAGGCC+AGG | - | chr8.3:13143803-13143822 | None:intergenic | 50.0% | |
| AATATCTCTCCCACTCCCAC+AGG | + | chr8.3:13144308-13144327 | MS.gene61508:intron | 50.0% | |
| AATGAAGTCTGAGCAGGCCA+GGG | - | chr8.3:13143802-13143821 | None:intergenic | 50.0% | |
| AGTAGGATCAGCATTGCCAG+TGG | - | chr8.3:13145014-13145033 | None:intergenic | 50.0% | |
| ATATCTCTCCCACTCCCACA+GGG | + | chr8.3:13144309-13144328 | MS.gene61508:intron | 50.0% | |
| CAAATAGAGGCCATATGCCC+CGG | + | chr8.3:13144432-13144451 | MS.gene61508:CDS | 50.0% | |
| CAACAGCTGAGTCCATCGTA+CGG | + | chr8.3:13143735-13143754 | MS.gene61508:CDS | 50.0% | |
| CCATAGGCCAAACAGATTGC+AGG | + | chr8.3:13144957-13144976 | MS.gene61508:CDS | 50.0% | |
| CCTGCAATCTGTTTGGCCTA+TGG | - | chr8.3:13144960-13144979 | None:intergenic | 50.0% | |
| TACAACTGTGGACCGTACGA+TGG | - | chr8.3:13143750-13143769 | None:intergenic | 50.0% | |
| TGGAGATGGTTTGAGAAGGG+TGG | + | chr8.3:13145081-13145100 | MS.gene61508:CDS | 50.0% | |
| TGGTTTGAGAAGGGTGGCTT+TGG | + | chr8.3:13145087-13145106 | MS.gene61508:CDS | 50.0% | |
| ! | AAAGATCCAAGCATTGCCCC+TGG | + | chr8.3:13143782-13143801 | MS.gene61508:CDS | 50.0% |
| ! | AGCTCGTGATGCTGTCGATT+TGG | + | chr8.3:13144488-13144507 | MS.gene61508:CDS | 50.0% |
| !! | GGATTCTAGAGTCAGACCAG+AGG | + | chr8.3:13145170-13145189 | MS.gene61508:CDS | 50.0% |
| AGAGTCAGACCAGAGGCTGT+GGG | + | chr8.3:13145177-13145196 | MS.gene61508:CDS | 55.0% | |
| ATGAAGTCTGAGCAGGCCAG+GGG | - | chr8.3:13143801-13143820 | None:intergenic | 55.0% | |
| CAGAATCTTCCCACAGCCTC+TGG | - | chr8.3:13145189-13145208 | None:intergenic | 55.0% | |
| CATCACGAGCTGCCAATGCT+AGG | - | chr8.3:13144479-13144498 | None:intergenic | 55.0% | |
| GACAGAGTGATGGCCCAAGT+TGG | + | chr8.3:13144627-13144646 | MS.gene61508:intron | 55.0% | |
| GTATTGTGTATGCGCACGCG+TGG | - | chr8.3:13144554-13144573 | None:intergenic | 55.0% | |
| TAGAGTCAGACCAGAGGCTG+TGG | + | chr8.3:13145176-13145195 | MS.gene61508:CDS | 55.0% | |
| TTGCAGGGTTCTCTGCAGAG+AGG | + | chr8.3:13144352-13144371 | MS.gene61508:CDS | 55.0% | |
| ! | CGTACGATGGACTCAGCTGT+TGG | - | chr8.3:13143737-13143756 | None:intergenic | 55.0% |
| !! | CTGTGGGTACTGGCCAACTT+GGG | - | chr8.3:13144643-13144662 | None:intergenic | 55.0% |
| ATGGATCCATCGCAGCCCTG+TGG | - | chr8.3:13144327-13144346 | None:intergenic | 60.0% | |
| TGGATCCATCGCAGCCCTGT+GGG | - | chr8.3:13144326-13144345 | None:intergenic | 60.0% | |
| ! | CCAAGTTGGCCAGTACCCAC+AGG | + | chr8.3:13144641-13144660 | MS.gene61508:CDS | 60.0% |
| !! | CCTGTGGGTACTGGCCAACT+TGG | - | chr8.3:13144644-13144663 | None:intergenic | 60.0% |
| AGCAGGCCAGGGGCAATGCT+TGG | - | chr8.3:13143791-13143810 | None:intergenic | 65.0% | |
| CATCGCAGCCCTGTGGGAGT+GGG | - | chr8.3:13144320-13144339 | None:intergenic | 65.0% | |
| CCACTCCCACAGGGCTGCGA+TGG | + | chr8.3:13144318-13144337 | MS.gene61508:intron | 70.0% | |
| CCATCGCAGCCCTGTGGGAG+TGG | - | chr8.3:13144321-13144340 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 13143644 | 13145369 | 13143644 | ID=MS.gene61508 |
| chr8.3 | mRNA | 13143644 | 13145369 | 13143644 | ID=MS.gene61508.t1;Parent=MS.gene61508 |
| chr8.3 | exon | 13143644 | 13143841 | 13143644 | ID=MS.gene61508.t1.exon1;Parent=MS.gene61508.t1 |
| chr8.3 | CDS | 13143644 | 13143841 | 13143644 | ID=cds.MS.gene61508.t1;Parent=MS.gene61508.t1 |
| chr8.3 | exon | 13144330 | 13144509 | 13144330 | ID=MS.gene61508.t1.exon2;Parent=MS.gene61508.t1 |
| chr8.3 | CDS | 13144330 | 13144509 | 13144330 | ID=cds.MS.gene61508.t1;Parent=MS.gene61508.t1 |
| chr8.3 | exon | 13144632 | 13144794 | 13144632 | ID=MS.gene61508.t1.exon3;Parent=MS.gene61508.t1 |
| chr8.3 | CDS | 13144632 | 13144794 | 13144632 | ID=cds.MS.gene61508.t1;Parent=MS.gene61508.t1 |
| chr8.3 | exon | 13144948 | 13145369 | 13144948 | ID=MS.gene61508.t1.exon4;Parent=MS.gene61508.t1 |
| chr8.3 | CDS | 13144948 | 13145369 | 13144948 | ID=cds.MS.gene61508.t1;Parent=MS.gene61508.t1 |
| Gene Sequence |
| Protein sequence |
