AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051232

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051232.t1 MTR_2g040000 96.386 332 12 0 1 332 1 332 0.0 664
MS.gene051232.t1 MTR_4g125940 69.255 322 96 2 11 332 12 330 1.53e-161 454
MS.gene051232.t1 MTR_4g125940 73.551 276 72 1 57 332 1 275 2.54e-147 416
MS.gene051232.t1 MTR_1g054205 55.799 319 135 2 16 331 11 326 4.19e-124 359
MS.gene051232.t1 MTR_7g093370 54.321 324 142 2 11 331 51 371 4.41e-123 358
MS.gene051232.t1 MTR_2g029815 49.701 334 158 4 4 332 3 331 1.41e-109 323
MS.gene051232.t1 MTR_8g076820 52.564 312 142 2 23 332 24 331 2.97e-109 322
MS.gene051232.t1 MTR_5g021060 52.941 306 138 2 29 332 30 331 1.52e-108 320
MS.gene051232.t1 MTR_2g028980 52.941 306 139 2 28 331 28 330 1.58e-106 315
MS.gene051232.t1 MTR_2g029800 51.792 307 143 2 28 332 28 331 4.44e-106 314
MS.gene051232.t1 MTR_2g084110 50.920 326 145 5 8 331 5 317 6.19e-106 313
MS.gene051232.t1 MTR_5g017860 48.788 330 160 4 5 331 3 326 1.10e-104 310
MS.gene051232.t1 MTR_5g083860 50.920 326 141 6 10 331 15 325 1.88e-104 309
MS.gene051232.t1 MTR_3g094650 50.301 332 147 7 4 331 5 322 2.93e-104 308
MS.gene051232.t1 MTR_2g084010 51.961 306 134 3 28 331 24 318 3.97e-104 308
MS.gene051232.t1 MTR_2g029820 49.511 307 150 2 28 332 28 331 7.06e-104 308
MS.gene051232.t1 MTR_2g084080 49.536 323 148 4 11 331 8 317 8.06e-104 307
MS.gene051232.t1 MTR_5g017850 48.485 330 161 4 5 331 3 326 1.14e-103 307
MS.gene051232.t1 MTR_2g029830 50.163 307 148 2 28 332 27 330 3.24e-103 307
MS.gene051232.t1 MTR_3g072190 48.632 329 151 4 9 331 2 318 4.00e-103 305
MS.gene051232.t1 MTR_2g084020 50.155 323 147 4 11 331 8 318 1.08e-102 304
MS.gene051232.t1 MTR_5g074970 51.220 328 139 6 10 331 14 326 1.67e-102 304
MS.gene051232.t1 MTR_3g466200 52.258 310 129 6 28 331 24 320 1.72e-102 304
MS.gene051232.t1 MTR_2g029560 50.163 307 148 2 28 332 23 326 1.08e-101 303
MS.gene051232.t1 MTR_2g029730 50.327 306 147 2 28 331 24 326 5.52e-101 301
MS.gene051232.t1 MTR_2g029860 46.547 333 173 2 1 331 1 330 8.87e-101 301
MS.gene051232.t1 MTR_7g072510 48.265 317 150 3 17 331 8 312 1.56e-100 298
MS.gene051232.t1 MTR_2g084000 47.059 323 158 3 11 331 8 319 9.09e-100 297
MS.gene051232.t1 MTR_3g094670 52.188 320 136 6 16 331 16 322 1.52e-98 294
MS.gene051232.t1 MTR_2g029750 49.673 306 149 2 28 331 28 330 2.97e-98 294
MS.gene051232.t1 MTR_2g029740 49.020 306 151 2 28 331 28 330 9.10e-98 293
MS.gene051232.t1 MTR_3g094630 51.818 330 140 6 6 331 8 322 1.24e-97 291
MS.gene051232.t1 MTR_2g029850 49.346 306 150 2 28 331 28 330 2.68e-97 292
MS.gene051232.t1 MTR_4g083710 46.809 329 157 5 11 331 6 324 3.17e-97 291
MS.gene051232.t1 MTR_7g072480 50.327 306 138 4 28 331 23 316 1.95e-96 288
MS.gene051232.t1 MTR_4g029170 46.769 325 157 5 11 331 9 321 6.73e-96 287
MS.gene051232.t1 MTR_4g122640 48.837 301 146 3 33 331 42 336 8.13e-96 287
MS.gene051232.t1 MTR_2g084090 47.561 328 154 6 8 331 5 318 2.46e-95 286
MS.gene051232.t1 MTR_5g014100 50.645 310 142 5 29 331 26 331 2.61e-95 286
MS.gene051232.t1 MTR_4g029180 49.175 303 138 5 33 331 31 321 3.84e-94 283
MS.gene051232.t1 MTR_4g029200 46.326 313 154 3 21 331 38 338 7.22e-94 283
MS.gene051232.t1 MTR_5g074860 46.386 332 159 7 7 330 4 324 1.24e-93 281
MS.gene051232.t1 MTR_4g074995 46.407 334 142 7 6 331 4 308 1.16e-92 278
MS.gene051232.t1 MTR_5g074760 47.239 326 156 7 11 331 7 321 2.17e-92 278
MS.gene051232.t1 MTR_4g030890 48.197 305 148 4 29 331 100 396 1.20e-91 280
MS.gene051232.t1 MTR_2g029910 46.429 308 159 3 28 332 29 333 1.41e-91 277
MS.gene051232.t1 MTR_1g022970 48.197 305 153 2 29 331 46 347 3.72e-91 276
MS.gene051232.t1 MTR_4g031140 46.405 306 154 4 29 332 28 325 4.08e-91 276
MS.gene051232.t1 MTR_3g466180 48.607 323 149 4 11 331 16 323 4.11e-91 275
MS.gene051232.t1 MTR_5g074740 46.933 326 157 7 11 331 7 321 2.14e-90 273
MS.gene051232.t1 MTR_4g046713 44.753 324 170 5 11 331 9 326 1.16e-89 271
MS.gene051232.t1 MTR_5g049280 45.981 311 162 4 26 332 30 338 1.54e-89 271
MS.gene051232.t1 MTR_5g074710 46.296 324 155 8 16 331 9 321 8.79e-89 269
MS.gene051232.t1 MTR_2g088770 45.399 326 169 5 10 332 7 326 7.13e-88 267
MS.gene051232.t1 MTR_4g114210 45.768 319 160 5 18 331 10 320 3.89e-86 262
MS.gene051232.t1 MTR_2g008710 46.535 303 150 5 33 331 31 325 1.03e-85 261
MS.gene051232.t1 MTR_4g074990 44.984 309 139 4 28 331 23 305 1.45e-85 260
MS.gene051232.t1 MTR_3g467600 45.955 309 152 6 28 331 26 324 1.19e-83 256
MS.gene051232.t1 MTR_2g029830 49.615 260 126 2 75 332 6 262 1.59e-83 254
MS.gene051232.t1 MTR_4g029190 44.300 307 158 5 28 331 44 340 2.10e-83 256
MS.gene051232.t1 MTR_1g115900 45.631 309 152 6 28 332 26 322 8.85e-83 254
MS.gene051232.t1 MTR_7g026990 42.638 326 171 6 10 332 11 323 2.35e-82 253
MS.gene051232.t1 MTR_1g101830 43.210 324 166 7 11 331 14 322 7.10e-82 251
MS.gene051232.t1 MTR_5g022870 45.364 302 150 8 33 331 27 316 1.35e-80 248
MS.gene051232.t1 MTR_4g074980 46.078 306 128 6 28 331 24 294 2.01e-80 247
MS.gene051232.t1 MTR_0155s0040 44.918 305 150 8 29 331 27 315 1.81e-79 245
MS.gene051232.t1 MTR_3g072190 49.618 262 118 3 72 331 2 251 6.11e-79 241
MS.gene051232.t1 MTR_1g086320 45.246 305 156 5 33 331 34 333 3.18e-77 240
MS.gene051232.t1 MTR_3g092990 42.532 308 169 3 28 332 25 327 2.12e-76 238
MS.gene051232.t1 MTR_7g107520 43.464 306 160 6 29 331 25 320 5.33e-76 236
MS.gene051232.t1 MTR_8g075100 43.377 302 156 8 33 331 30 319 3.12e-75 234
MS.gene051232.t1 MTR_7g029030 40.994 322 176 6 12 331 11 320 9.79e-75 233
MS.gene051232.t1 MTR_1g086490 43.590 312 158 5 33 331 34 340 2.84e-74 233
MS.gene051232.t1 MTR_5g016010 36.527 334 183 5 13 330 8 328 5.23e-73 229
MS.gene051232.t1 MTR_1g090760 39.157 332 186 6 11 331 4 330 9.83e-73 228
MS.gene051232.t1 MTR_1g009750 38.154 325 191 4 12 331 9 328 9.25e-72 226
MS.gene051232.t1 MTR_4g074980 48.729 236 110 3 28 258 24 253 9.34e-72 223
MS.gene051232.t1 MTR_7g086820 40.000 300 168 6 33 331 24 312 9.79e-72 225
MS.gene051232.t1 MTR_2g067440 37.853 354 180 8 13 332 42 389 1.02e-71 228
MS.gene051232.t1 MTR_1g025980 42.951 305 160 7 29 330 24 317 1.14e-71 225
MS.gene051232.t1 MTR_5g074860 40.060 332 141 7 7 330 4 285 1.21e-71 224
MS.gene051232.t1 MTR_4g127670 40.397 302 173 2 28 327 23 319 2.45e-71 224
MS.gene051232.t1 MTR_2g008160 42.258 310 168 6 26 331 21 323 2.70e-71 224
MS.gene051232.t1 MTR_6g043280 40.244 328 175 8 12 332 20 333 2.85e-71 224
MS.gene051232.t1 MTR_4g133800 41.196 301 161 7 34 331 46 333 3.61e-71 224
MS.gene051232.t1 MTR_1g077000 40.798 326 171 8 13 331 17 327 5.81e-71 224
MS.gene051232.t1 MTR_2g099175 37.237 333 188 6 13 332 12 336 8.48e-70 221
MS.gene051232.t1 MTR_1g038680 42.623 305 164 6 33 331 33 332 2.75e-69 219
MS.gene051232.t1 MTR_2g078610 37.725 334 169 6 33 332 80 408 4.79e-69 221
MS.gene051232.t1 MTR_6g027440 39.564 321 178 7 13 331 8 314 1.10e-68 218
MS.gene051232.t1 MTR_8g062780 39.692 325 187 5 12 332 6 325 1.15e-68 218
MS.gene051232.t1 MTR_2g437770 41.196 301 164 7 33 332 54 342 1.32e-68 218
MS.gene051232.t1 MTR_6g043240 40.000 310 173 4 22 331 35 331 2.98e-68 218
MS.gene051232.t1 MTR_7g086870 39.934 303 163 7 33 332 26 312 7.86e-68 215
MS.gene051232.t1 MTR_2g077990 37.425 334 170 6 33 332 80 408 1.32e-67 218
MS.gene051232.t1 MTR_4g095450 37.538 325 186 6 12 330 10 323 3.25e-67 214
MS.gene051232.t1 MTR_2g008730 40.924 303 143 5 33 331 31 301 1.16e-66 212
MS.gene051232.t1 MTR_4g087965 40.129 309 169 7 28 327 41 342 3.91e-65 209
MS.gene051232.t1 MTR_3g092990 40.260 308 165 4 28 332 25 316 9.23e-65 207
MS.gene051232.t1 MTR_2g078280 37.855 317 159 6 33 316 80 391 1.23e-63 207
MS.gene051232.t1 MTR_1g009750 35.604 323 185 5 12 331 9 311 4.02e-61 197
MS.gene051232.t1 MTR_6g043460 37.730 326 179 8 11 327 14 324 5.65e-60 196
MS.gene051232.t1 MTR_2g067450 37.700 313 167 8 33 332 15 312 5.09e-59 192
MS.gene051232.t1 MTR_2g008160 37.742 310 147 6 26 331 21 288 6.06e-58 189
MS.gene051232.t1 MTR_0147s0010 36.164 318 166 5 33 330 81 381 1.57e-57 191
MS.gene051232.t1 MTR_1g066710 35.691 311 186 7 26 332 24 324 8.87e-57 187
MS.gene051232.t1 MTR_5g033470 35.714 308 182 7 33 331 77 377 1.95e-55 185
MS.gene051232.t1 MTR_3g105790 36.184 304 179 6 33 331 29 322 5.26e-55 182
MS.gene051232.t1 MTR_4g132490 34.528 307 191 5 28 331 28 327 5.52e-55 182
MS.gene051232.t1 MTR_0286s0010 36.508 315 176 8 28 331 33 334 3.30e-54 181
MS.gene051232.t1 MTR_6g008075 36.508 315 176 8 28 331 33 334 3.30e-54 181
MS.gene051232.t1 MTR_1g066640 35.370 311 187 6 26 332 24 324 1.05e-53 179
MS.gene051232.t1 MTR_1g066680 35.048 311 187 5 26 332 24 323 1.32e-52 176
MS.gene051232.t1 MTR_4g132110 35.202 321 193 6 16 332 20 329 1.45e-52 176
MS.gene051232.t1 MTR_5g074700 41.350 237 111 7 98 331 3 214 2.76e-52 172
MS.gene051232.t1 MTR_1g066380 34.304 309 189 6 28 332 26 324 1.71e-51 173
MS.gene051232.t1 MTR_4g132110 34.663 326 193 7 16 332 20 334 1.06e-50 172
MS.gene051232.t1 MTR_2g008160 49.123 171 85 2 26 196 21 189 2.82e-48 161
MS.gene051232.t1 MTR_3g072210 46.154 195 93 3 138 331 55 238 1.55e-47 160
MS.gene051232.t1 MTR_2g029880 42.268 194 99 3 139 332 9 189 1.20e-42 147
MS.gene051232.t1 MTR_1g066380 34.091 264 160 6 73 332 3 256 6.78e-41 144
MS.gene051232.t1 MTR_3g105790 36.626 243 141 5 94 331 12 246 1.85e-40 142
MS.gene051232.t1 MTR_3g072260 53.030 132 56 2 9 134 2 133 1.11e-39 137
MS.gene051232.t1 MTR_7g072490 40.079 252 83 6 75 324 2 187 6.55e-39 137
MS.gene051232.t1 MTR_2g077980 32.632 285 142 10 89 332 11 286 2.04e-33 125
MS.gene051232.t1 MTR_2g078560 31.416 226 121 4 132 327 95 316 2.39e-31 120
MS.gene051232.t1 MTR_4g031040 33.908 174 67 4 89 260 4 131 1.78e-21 89.0
MS.gene051232.t1 MTR_5g058120 33.939 165 93 3 163 327 7 155 2.25e-21 92.0
MS.gene051232.t1 MTR_3g462850 35.811 148 91 3 187 332 5 150 2.39e-21 89.0
MS.gene051232.t1 MTR_4g114220 48.889 90 38 2 48 137 22 103 2.71e-20 85.9
MS.gene051232.t1 MTR_7g086790 32.275 189 104 5 76 262 17 183 2.67e-19 84.7
MS.gene051232.t1 MTR_6g048160 59.420 69 26 2 68 136 22 88 1.52e-18 79.7
MS.gene051232.t1 MTR_1g098320 43.373 83 42 1 249 331 47 124 9.94e-16 73.6
MS.gene051232.t1 MTR_1g089005 36.496 137 74 4 33 161 19 150 1.37e-15 73.6
MS.gene051232.t1 MTR_5g074770 39.362 94 52 2 237 330 20 108 6.49e-15 70.5
MS.gene051232.t1 MTR_7g107500 43.478 92 44 3 241 331 13 97 3.76e-14 67.8
MS.gene051232.t1 MTR_2g029930 41.000 100 29 4 28 111 18 103 3.82e-13 65.5
MS.gene051232.t1 MTR_7g086810 32.407 108 49 1 33 140 10 93 5.22e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051232.t1 AT5G19890 60.312 320 122 4 13 332 14 328 1.08e-134 386
MS.gene051232.t1 AT5G06720 52.923 325 146 3 11 331 12 333 3.29e-118 344
MS.gene051232.t1 AT5G06730 52.000 325 149 3 11 331 13 334 4.99e-117 342
MS.gene051232.t1 AT4G36430 54.072 307 135 2 28 332 29 331 1.30e-114 335
MS.gene051232.t1 AT2G18150 52.922 308 139 2 26 331 33 336 3.96e-112 329
MS.gene051232.t1 AT2G38390 51.140 307 144 3 28 331 30 333 2.22e-108 320
MS.gene051232.t1 AT2G18140 52.459 305 139 2 29 331 35 335 4.64e-108 319
MS.gene051232.t1 AT5G05340 52.885 312 129 5 25 331 26 324 1.10e-106 315
MS.gene051232.t1 AT5G66390 51.475 305 142 2 29 331 33 333 2.42e-106 314
MS.gene051232.t1 AT2G38380 51.792 307 142 3 28 331 30 333 1.35e-105 313
MS.gene051232.t1 AT3G50990 51.475 305 142 2 29 331 41 341 3.37e-105 311
MS.gene051232.t1 AT1G49570 53.000 300 131 4 33 327 52 346 8.20e-103 306
MS.gene051232.t1 AT3G32980 50.649 308 147 3 28 332 30 335 8.38e-103 306
MS.gene051232.t1 AT4G08770 49.351 308 151 3 28 332 23 328 1.66e-99 297
MS.gene051232.t1 AT5G19880 50.617 324 147 4 13 331 14 329 5.60e-99 295
MS.gene051232.t1 AT1G44970 51.803 305 142 2 29 331 45 346 2.21e-98 294
MS.gene051232.t1 AT4G16270 51.495 301 138 3 33 331 54 348 1.23e-97 293
MS.gene051232.t1 AT3G49110 49.675 308 150 3 28 332 32 337 5.86e-97 291
MS.gene051232.t1 AT3G49120 49.675 308 150 3 28 332 31 336 5.99e-97 291
MS.gene051232.t1 AT4G08780 47.403 308 157 3 28 332 23 328 1.49e-96 290
MS.gene051232.t1 AT1G14550 45.679 324 163 4 11 331 8 321 1.92e-94 283
MS.gene051232.t1 AT5G58390 50.155 323 146 5 13 331 5 316 4.35e-94 282
MS.gene051232.t1 AT5G58400 46.828 331 158 7 6 331 8 325 5.64e-93 280
MS.gene051232.t1 AT2G22420 43.653 323 168 5 11 331 9 319 1.08e-89 271
MS.gene051232.t1 AT2G35380 49.342 304 147 4 33 331 34 335 2.12e-89 271
MS.gene051232.t1 AT5G64120 47.157 299 149 5 33 331 39 328 3.64e-89 270
MS.gene051232.t1 AT2G41480 45.566 327 166 7 10 331 9 328 4.23e-88 268
MS.gene051232.t1 AT1G68850 43.871 310 165 5 29 332 30 336 3.05e-87 266
MS.gene051232.t1 AT1G14540 43.849 317 166 3 17 331 9 315 1.82e-86 263
MS.gene051232.t1 AT4G11290 43.653 323 173 4 13 331 9 326 1.28e-85 261
MS.gene051232.t1 AT5G39580 47.333 300 148 6 33 331 29 319 4.02e-84 257
MS.gene051232.t1 AT1G05260 42.679 321 177 4 14 332 11 326 1.27e-83 256
MS.gene051232.t1 AT5G15180 41.896 327 180 6 9 331 9 329 1.99e-83 256
MS.gene051232.t1 AT3G01190 43.533 317 170 5 16 331 13 321 5.56e-82 251
MS.gene051232.t1 AT5G17820 41.875 320 170 6 12 331 10 313 1.35e-78 243
MS.gene051232.t1 AT5G51890 40.741 324 178 7 12 331 9 322 1.80e-77 240
MS.gene051232.t1 AT1G05240 42.581 310 166 6 27 331 23 325 1.87e-77 240
MS.gene051232.t1 AT1G05250 42.581 310 166 6 27 331 23 325 1.87e-77 240
MS.gene051232.t1 AT5G64110 42.073 328 177 6 10 331 10 330 2.15e-77 240
MS.gene051232.t1 AT3G03670 42.202 327 178 5 7 331 4 321 3.53e-77 239
MS.gene051232.t1 AT5G17820 42.006 319 169 6 13 331 64 366 3.77e-77 241
MS.gene051232.t1 AT3G21770 42.345 307 170 4 28 332 28 329 1.02e-76 238
MS.gene051232.t1 AT5G14130 38.700 323 190 4 11 331 14 330 8.88e-76 236
MS.gene051232.t1 AT5G14130 38.700 323 190 4 11 331 55 371 3.96e-75 236
MS.gene051232.t1 AT1G77100 45.484 310 150 8 28 331 23 319 2.41e-74 232
MS.gene051232.t1 AT4G25980 41.121 321 172 5 16 331 18 326 2.45e-74 232
MS.gene051232.t1 AT4G37530 41.424 309 171 4 28 331 26 329 4.91e-74 231
MS.gene051232.t1 AT5G42180 42.295 305 162 7 29 330 23 316 1.64e-73 230
MS.gene051232.t1 AT1G71695 41.720 314 166 8 24 332 39 340 1.23e-72 229
MS.gene051232.t1 AT2G18980 39.077 325 186 5 11 331 7 323 4.01e-72 226
MS.gene051232.t1 AT4G33870 37.143 350 176 6 16 327 54 397 3.30e-71 227
MS.gene051232.t1 AT4G37520 39.159 309 178 4 28 331 26 329 3.57e-71 224
MS.gene051232.t1 AT4G30170 40.260 308 172 5 28 331 26 325 1.01e-70 223
MS.gene051232.t1 AT4G33420 42.623 305 157 8 29 331 37 325 1.87e-69 219
MS.gene051232.t1 AT4G33420 42.623 305 157 8 29 331 84 372 9.67e-69 219
MS.gene051232.t1 AT5G64100 41.472 299 167 6 33 331 41 331 9.99e-69 218
MS.gene051232.t1 AT2G43480 40.566 318 173 7 21 331 27 335 1.35e-68 218
MS.gene051232.t1 AT4G17690 39.365 315 167 6 27 332 24 323 1.39e-68 218
MS.gene051232.t1 AT5G24070 37.463 339 186 9 11 332 7 336 1.66e-68 218
MS.gene051232.t1 AT4G37520 38.511 309 177 5 28 331 26 326 3.22e-68 216
MS.gene051232.t1 AT2G35380 47.967 246 123 3 89 331 4 247 4.03e-68 214
MS.gene051232.t1 AT5G67400 38.438 333 190 5 9 331 2 329 1.51e-65 210
MS.gene051232.t1 AT3G49960 38.511 309 180 4 28 331 26 329 5.32e-65 208
MS.gene051232.t1 AT5G22410 38.820 322 182 9 12 328 11 322 1.38e-64 207
MS.gene051232.t1 AT4G37530 43.307 254 139 3 28 276 26 279 6.76e-64 204
MS.gene051232.t1 AT2G34060 37.612 335 188 6 11 329 15 344 7.70e-64 206
MS.gene051232.t1 AT5G47000 36.970 330 181 6 16 332 16 331 4.11e-63 204
MS.gene051232.t1 AT2G24800 40.323 310 169 7 28 331 30 329 5.67e-63 203
MS.gene051232.t1 AT5G40150 37.580 314 170 6 28 331 31 328 6.14e-63 203
MS.gene051232.t1 AT4G26010 37.615 327 179 8 8 331 5 309 6.02e-61 197
MS.gene051232.t1 AT2G39040 39.936 313 172 7 28 331 45 350 6.95e-61 198
MS.gene051232.t1 AT4G26010 37.615 327 179 8 8 331 33 337 9.64e-61 197
MS.gene051232.t1 AT1G30870 39.172 314 173 8 24 332 46 346 6.02e-60 196
MS.gene051232.t1 AT3G28200 36.538 312 175 5 28 331 20 316 2.44e-59 193
MS.gene051232.t1 AT4G31760 36.012 336 200 7 1 331 1 326 2.96e-59 193
MS.gene051232.t1 AT1G34510 34.557 327 191 7 8 332 5 310 8.94e-58 189
MS.gene051232.t1 AT4G21960 34.242 330 202 5 7 332 10 328 1.18e-57 189
MS.gene051232.t1 AT1G24110 35.692 325 199 5 11 331 4 322 1.42e-56 186
MS.gene051232.t1 AT2G37130 33.882 304 186 6 33 331 3 296 1.26e-47 162
MS.gene051232.t1 AT2G37130 33.882 304 186 6 33 331 34 327 3.32e-47 162
MS.gene051232.t1 AT5G39580 51.462 171 80 3 33 203 29 196 4.65e-46 156
MS.gene051232.t1 AT3G17070 30.952 336 213 6 7 331 12 339 8.37e-46 159
MS.gene051232.t1 AT4G25980 46.914 162 84 2 33 194 75 234 1.37e-42 149
MS.gene051232.t1 AT2G24800 40.385 208 111 6 28 228 30 231 1.10e-34 127
MS.gene051232.t1 AT3G17070 30.224 268 171 6 71 331 18 276 1.29e-33 125
MS.gene051232.t1 AT1G77490 27.941 204 110 7 120 314 165 340 8.80e-14 72.0
MS.gene051232.t1 AT3G42570 30.201 149 95 3 47 194 9 149 9.04e-14 68.6
MS.gene051232.t1 AT1G77490 27.941 204 110 7 120 314 165 340 1.26e-13 71.6

Find 46 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCAAGAATTTGCTTAA+TGG 0.156289 2.3:-49354932 MS.gene051232:CDS
AAAGACGTTGTTACTTTATC+AGG 0.235960 2.3:-49356716 MS.gene051232:intron
CATCACTTGAAAAGAGAATT+TGG 0.238726 2.3:+49354888 None:intergenic
GGGAATATAAATCCACTTAT+TGG 0.243677 2.3:-49354770 MS.gene051232:CDS
TCTCTAGGTGCCCACACTAT+TGG 0.352170 2.3:-49355133 MS.gene051232:intron
CCTCTAGCTGAATTTCTGTT+TGG 0.364874 2.3:+49357118 None:intergenic
CCTAGCTGAACGTACCAAAA+AGG 0.375211 2.3:+49356851 None:intergenic
AACAGAATCTCTAGCAACTA+TGG 0.388400 2.3:+49357018 None:intergenic
TCAAATTGATCAGCTGAGTA+TGG 0.390801 2.3:+49354962 None:intergenic
GATGGTTCAGTTCTGCTTGA+TGG 0.400241 2.3:-49357169 MS.gene051232:CDS
AAGAATTTGCTTAATGGAAA+GGG 0.410077 2.3:-49354926 MS.gene051232:CDS
CACTTCAACCACTAAACAAC+TGG 0.412479 2.3:-49354858 MS.gene051232:CDS
ATATTGAACCAGTTGTTTAG+TGG 0.423814 2.3:+49354850 None:intergenic
AACAGATTATTCAACTTCTC+TGG 0.426365 2.3:-49355085 MS.gene051232:CDS
TGCCTATGCTATGATTAAGA+TGG 0.431308 2.3:-49354792 MS.gene051232:CDS
CAAGAATTTGCTTAATGGAA+AGG 0.434349 2.3:-49354927 MS.gene051232:CDS
TCATATTCTAAAGTATTGTC+TGG 0.440491 2.3:+49355052 None:intergenic
TTTGGCTCTCAGGGTTGTGA+TGG 0.446467 2.3:-49357187 MS.gene051232:intron
GCCTATGCTATGATTAAGAT+GGG 0.460291 2.3:-49354791 MS.gene051232:CDS
TTACATTTACAAAGCAATCA+TGG 0.460562 2.3:+49357841 None:intergenic
AAGACCAACGTTATCAAACT+TGG 0.468625 2.3:+49356745 None:intergenic
TTGGTTCTGAGGGAGAGATT+AGG 0.479464 2.3:-49354751 MS.gene051232:CDS
AGAGAATTTGGTCAGAGCTA+AGG 0.483371 2.3:+49354900 None:intergenic
GCTAGGACGCAGAGATGGAT+TGG 0.510343 2.3:-49356834 MS.gene051232:CDS
TCTCCCTCAGAACCAATAAG+TGG 0.511178 2.3:+49354758 None:intergenic
ATAGTACTTAGTGAGTCAAA+TGG 0.513048 2.3:+49356773 None:intergenic
AATCCACTTATTGGTTCTGA+GGG 0.517484 2.3:-49354761 MS.gene051232:CDS
AAATCCACTTATTGGTTCTG+AGG 0.528451 2.3:-49354762 MS.gene051232:CDS
CAGTTGTTTAGTGGTTGAAG+TGG 0.545293 2.3:+49354859 None:intergenic
CAAAACTTGTGTCCACAAGA+TGG 0.549054 2.3:-49355013 MS.gene051232:CDS
GGGGTAAGTTGAGGTCTCAT+AGG 0.551253 2.3:+49357975 None:intergenic
ATTTCCAAGTTTGATAACGT+TGG 0.559993 2.3:-49356749 MS.gene051232:CDS
GTGTTACCATCTCCATCTTG+TGG 0.563148 2.3:+49355001 None:intergenic
ACCTAGCTCGTCCAATAGTG+TGG 0.565589 2.3:+49355122 None:intergenic
CTTAGTGAGTCAAATGGAGA+AGG 0.571397 2.3:+49356779 None:intergenic
CCCCATCTTAATCATAGCAT+AGG 0.598668 2.3:+49354790 None:intergenic
GTTCAGCTAGGACGCAGAGA+TGG 0.601311 2.3:-49356839 MS.gene051232:CDS
ATTGGTCTCAAATAAAACAC+TGG 0.610195 2.3:-49356816 MS.gene051232:CDS
CCAAACAGAAATTCAGCTAG+AGG 0.612793 2.3:-49357118 MS.gene051232:CDS
TTGTGTCCACAAGATGGAGA+TGG 0.623591 2.3:-49355007 MS.gene051232:CDS
AGATAGAATCAAAAGTTCAG+TGG 0.624952 2.3:-49357083 MS.gene051232:CDS
CCTAGCTCGTCCAATAGTGT+GGG 0.634190 2.3:+49355123 None:intergenic
AATAAATGAAGAGATTCGAA+TGG 0.634769 2.3:-49357889 MS.gene051232:CDS
CCCACACTATTGGACGAGCT+AGG 0.650505 2.3:-49355123 MS.gene051232:CDS
TCAGTGGAGAGTTCATGTAG+TGG 0.653025 2.3:-49357067 MS.gene051232:CDS
CCTATGCTATGATTAAGATG+GGG 0.675465 2.3:-49354790 MS.gene051232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAACTATGAATTATTTTAT+AGG + chr2.3:49356321-49356340 None:intergenic 10.0%
!!! TTTATTTAAATAGTATTTTG+TGG + chr2.3:49355442-49355461 None:intergenic 10.0%
!!! TTTTTTTCTAATATAATATG+GGG + chr2.3:49356994-49357013 None:intergenic 10.0%
!! AAAAAATAAGACAATTCAAA+CGG - chr2.3:49356875-49356894 MS.gene051232:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr2.3:49357521-49357540 MS.gene051232:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr2.3:49357540-49357521 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr2.3:49357522-49357541 MS.gene051232:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr2.3:49357541-49357522 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - chr2.3:49357330-49357349 MS.gene051232:intron 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr2.3:49357449-49357430 None:intergenic 15.0%
!!! AAGAAATTTTTTATAAGCAT+TGG - chr2.3:49355493-49355512 MS.gene051232:intron 15.0%
!!! AATTTTGCAATAATTTTTTG+CGG - chr2.3:49357365-49357384 MS.gene051232:intron 15.0%
!!! ACTTATTTTCATTAACTTTT+TGG - chr2.3:49356648-49356667 MS.gene051232:intron 15.0%
!!! CAAATAATTAATTTGACTAT+AGG + chr2.3:49356084-49356103 None:intergenic 15.0%
!!! GAATGAAAGAATTTTTTTTA+TGG - chr2.3:49357949-49357968 MS.gene051232:CDS 15.0%
!!! GATTAATTTAGAAATTTTTG+AGG - chr2.3:49356174-49356193 MS.gene051232:intron 15.0%
!!! TTTTTTCTAATATAATATGG+GGG + chr2.3:49356993-49357012 None:intergenic 15.0%
!! AAAATGTTGGATAAACAAAA+AGG + chr2.3:49355563-49355582 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr2.3:49357460-49357479 MS.gene051232:intron 20.0%
!! AGTTTATGAAATAACAACTT+AGG + chr2.3:49356789-49356808 None:intergenic 20.0%
!! ATGTTAATGAATTTAAGCTA+AGG - chr2.3:49356216-49356235 MS.gene051232:intron 20.0%
!! CAAAAATAAGTCAATCAAAA+CGG + chr2.3:49356687-49356706 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr2.3:49357459-49357478 MS.gene051232:intron 20.0%
!! TAACTATTGTAAAAAGATCA+GGG + chr2.3:49354840-49354859 None:intergenic 20.0%
!! TAGAATGCATAAATAGAAAT+TGG + chr2.3:49357611-49357630 None:intergenic 20.0%
!! TATTATTCATAATCTTGTCA+AGG + chr2.3:49356813-49356832 None:intergenic 20.0%
!! TGTTAATGAATTTAAGCTAA+GGG - chr2.3:49356217-49356236 MS.gene051232:intron 20.0%
!! TTTCCTCTAAATTGAATTTA+GGG - chr2.3:49357034-49357053 MS.gene051232:CDS 20.0%
!!! AATCTGAATTTCTTTTGATA+GGG + chr2.3:49356158-49356177 None:intergenic 20.0%
!!! AGAAATTGGTAATAAATTCA+GGG + chr2.3:49357597-49357616 None:intergenic 20.0%
!!! ATATTTTTGGAGAGTTTATT+TGG - chr2.3:49356446-49356465 MS.gene051232:intron 20.0%
!!! ATTTGTTTCTATAAGCTATT+TGG + chr2.3:49356578-49356597 None:intergenic 20.0%
!!! TAACTTTTTGGAATAGTTTA+TGG - chr2.3:49356660-49356679 MS.gene051232:intron 20.0%
!!! TAATCTGAATTTCTTTTGAT+AGG + chr2.3:49356159-49356178 None:intergenic 20.0%
!!! TAGAAATTGGTAATAAATTC+AGG + chr2.3:49357598-49357617 None:intergenic 20.0%
!!! TTGTATAGTTTTATTGAAGT+AGG + chr2.3:49355013-49355032 None:intergenic 20.0%
!!! TTTGTTTCTATAAGCTATTT+GGG + chr2.3:49356577-49356596 None:intergenic 20.0%
!!! TTTTCCTCTAAATTGAATTT+AGG - chr2.3:49357033-49357052 MS.gene051232:CDS 20.0%
!!! TTTTGTTTATCCAACATTTT+TGG - chr2.3:49355563-49355582 MS.gene051232:intron 20.0%
!!! TTTTTCTAATATAATATGGG+GGG + chr2.3:49356992-49357011 None:intergenic 20.0%
! AAGTTGTCCTGTAAAAATAT+GGG + chr2.3:49354816-49354835 None:intergenic 25.0%
! AATAAATGAAGAGATTCGAA+TGG - chr2.3:49354879-49354898 MS.gene051232:CDS 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - chr2.3:49357493-49357512 MS.gene051232:intron 25.0%
! ATTGATCCAATAGTGAAAAT+AGG + chr2.3:49355298-49355317 None:intergenic 25.0%
! CAATAGTGAAAATAGGTTTA+TGG + chr2.3:49355291-49355310 None:intergenic 25.0%
! CTAACTATTGTAAAAAGATC+AGG + chr2.3:49354841-49354860 None:intergenic 25.0%
! GAATGAGTCAAATTAGTTAA+AGG - chr2.3:49356242-49356261 MS.gene051232:intron 25.0%
! GTTAATGAATTTAAGCTAAG+GGG - chr2.3:49356218-49356237 MS.gene051232:intron 25.0%
! TAACCCTAAATTCAATTTAG+AGG + chr2.3:49357040-49357059 None:intergenic 25.0%
! TAATTGAACTTGAACATACT+AGG + chr2.3:49355778-49355797 None:intergenic 25.0%
! TATGCATTCTAATATTCTCT+AGG - chr2.3:49357620-49357639 MS.gene051232:intron 25.0%
! TCATATCTCATTTGATTCAA+TGG + chr2.3:49355329-49355348 None:intergenic 25.0%
! TCCAAAAATATCTTACAAGT+GGG + chr2.3:49356437-49356456 None:intergenic 25.0%
! TGTCAAAAAAGTTACATAGA+GGG - chr2.3:49356114-49356133 MS.gene051232:intron 25.0%
! TTACATTTACAAAGCAATCA+TGG + chr2.3:49354930-49354949 None:intergenic 25.0%
! TTGTCAAAAAAGTTACATAG+AGG - chr2.3:49356113-49356132 MS.gene051232:intron 25.0%
!! AAGAATTTGCTTAATGGAAA+GGG - chr2.3:49357842-49357861 MS.gene051232:intron 25.0%
!! ATAGTTTTTGTCTTTGTTAG+TGG - chr2.3:49356333-49356352 MS.gene051232:intron 25.0%
!! CATAAACCTATTTTCACTAT+TGG - chr2.3:49355289-49355308 MS.gene051232:intron 25.0%
!! GAAATTGGTAATAAATTCAG+GGG + chr2.3:49357596-49357615 None:intergenic 25.0%
!! TACTTCAAGAATTTGCTTAA+TGG - chr2.3:49357836-49357855 MS.gene051232:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr2.3:49357170-49357189 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr2.3:49357171-49357190 None:intergenic 25.0%
!!! TCATATTCTAAAGTATTGTC+TGG + chr2.3:49357719-49357738 None:intergenic 25.0%
AACAGATTATTCAACTTCTC+TGG - chr2.3:49357683-49357702 MS.gene051232:intron 30.0%
AAGTCGTCTCTTAAAATTTG+TGG + chr2.3:49355225-49355244 None:intergenic 30.0%
AGATAGAATCAAAAGTTCAG+TGG - chr2.3:49355685-49355704 MS.gene051232:intron 30.0%
AGTTGTCCTGTAAAAATATG+GGG + chr2.3:49354815-49354834 None:intergenic 30.0%
ATAGTACTTAGTGAGTCAAA+TGG + chr2.3:49355998-49356017 None:intergenic 30.0%
ATATTGAACCAGTTGTTTAG+TGG + chr2.3:49357921-49357940 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - chr2.3:49357233-49357252 MS.gene051232:intron 30.0%
CAAGTTGTCCTGTAAAAATA+TGG + chr2.3:49354817-49354836 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG - chr2.3:49357492-49357511 MS.gene051232:intron 30.0%
CATCACTTGAAAAGAGAATT+TGG + chr2.3:49357883-49357902 None:intergenic 30.0%
CTCCAAAAATATCTTACAAG+TGG + chr2.3:49356438-49356457 None:intergenic 30.0%
GATGAGACTTATTGATCTAA+TGG - chr2.3:49355347-49355366 MS.gene051232:intron 30.0%
GGGAATATAAATCCACTTAT+TGG - chr2.3:49357998-49358017 MS.gene051232:CDS 30.0%
GGTGCAAAATTTGAGAAAAT+TGG + chr2.3:49355204-49355223 None:intergenic 30.0%
GTGAAAAACATGCTTATGTA+TGG - chr2.3:49355369-49355388 MS.gene051232:intron 30.0%
TAAAAATATGGGGTAAGTTG+AGG + chr2.3:49354805-49354824 None:intergenic 30.0%
TCAAATCTTATATAGCCGTA+GGG - chr2.3:49355064-49355083 MS.gene051232:CDS 30.0%
TTCAAATCTTATATAGCCGT+AGG - chr2.3:49355063-49355082 MS.gene051232:CDS 30.0%
TTGTAAATAACATCACCCTA+CGG + chr2.3:49355082-49355101 None:intergenic 30.0%
! ATGGATTGTAAGAGTTTGAT+TGG + chr2.3:49356398-49356417 None:intergenic 30.0%
! ATTGGTCTCAAATAAAACAC+TGG - chr2.3:49355952-49355971 MS.gene051232:intron 30.0%
! CAAGAATTTGCTTAATGGAA+AGG - chr2.3:49357841-49357860 MS.gene051232:intron 30.0%
! GTGATCATATTTTGTAGAGT+GGG - chr2.3:49355891-49355910 MS.gene051232:intron 30.0%
! TCCCACTTGTAAGATATTTT+TGG - chr2.3:49356433-49356452 MS.gene051232:intron 30.0%
! TGATCATATTTTGTAGAGTG+GGG - chr2.3:49355892-49355911 MS.gene051232:intron 30.0%
! TGTGATCATATTTTGTAGAG+TGG - chr2.3:49355890-49355909 MS.gene051232:intron 30.0%
!! AAAGACGTTGTTACTTTATC+AGG - chr2.3:49356052-49356071 MS.gene051232:intron 30.0%
!! AAATTTTAAGAGACGACTTG+AGG - chr2.3:49355226-49355245 MS.gene051232:intron 30.0%
!! AACTTACCCCATATTTTTAC+AGG - chr2.3:49354806-49354825 MS.gene051232:CDS 30.0%
!! ATTTCCAAGTTTGATAACGT+TGG - chr2.3:49356019-49356038 MS.gene051232:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr2.3:49357553-49357572 MS.gene051232:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr2.3:49357572-49357553 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr2.3:49357552-49357571 MS.gene051232:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr2.3:49357571-49357552 None:intergenic 30.0%
AACAGAATCTCTAGCAACTA+TGG + chr2.3:49355753-49355772 None:intergenic 35.0%
AAGACCAACGTTATCAAACT+TGG + chr2.3:49356026-49356045 None:intergenic 35.0%
AAGAGTTTGATTGGAGGTTA+GGG + chr2.3:49356389-49356408 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr2.3:49357537-49357556 MS.gene051232:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr2.3:49357556-49357537 None:intergenic 35.0%
ATATCTTACAAGTGGGAGTT+TGG + chr2.3:49356430-49356449 None:intergenic 35.0%
CCTATGCTATGATTAAGATG+GGG - chr2.3:49357978-49357997 MS.gene051232:CDS 35.0%
CTCACCTATGCACAATAAAT+TGG + chr2.3:49355252-49355271 None:intergenic 35.0%
GATTGTAAGAGTTTGATTGG+AGG + chr2.3:49356395-49356414 None:intergenic 35.0%
GCCTATGCTATGATTAAGAT+GGG - chr2.3:49357977-49357996 MS.gene051232:CDS 35.0%
TAAGAGTTTGATTGGAGGTT+AGG + chr2.3:49356390-49356409 None:intergenic 35.0%
TCAAATTGATCAGCTGAGTA+TGG + chr2.3:49357809-49357828 None:intergenic 35.0%
TGCCTATGCTATGATTAAGA+TGG - chr2.3:49357976-49357995 MS.gene051232:CDS 35.0%
! GATCATATTTTGTAGAGTGG+GGG - chr2.3:49355893-49355912 MS.gene051232:intron 35.0%
! TGTTAGTGGATCAAAGCTAA+GGG - chr2.3:49356347-49356366 MS.gene051232:intron 35.0%
! TTGTTAGTGGATCAAAGCTA+AGG - chr2.3:49356346-49356365 MS.gene051232:intron 35.0%
!! AAATCCACTTATTGGTTCTG+AGG - chr2.3:49358006-49358025 MS.gene051232:CDS 35.0%
!! AATCCACTTATTGGTTCTGA+GGG - chr2.3:49358007-49358026 MS.gene051232:CDS 35.0%
!! GAGTTTCTTCATTTTGAGTG+TGG - chr2.3:49354765-49354784 MS.gene051232:CDS 35.0%
AGACAATTCAAACGGACACT+AGG - chr2.3:49356883-49356902 MS.gene051232:intron 40.0%
AGAGAATTTGGTCAGAGCTA+AGG + chr2.3:49357871-49357890 None:intergenic 40.0%
ATCAAAGCTAAGGGGTGAAA+GGG - chr2.3:49356356-49356375 MS.gene051232:intron 40.0%
CAAAACTTGTGTCCACAAGA+TGG - chr2.3:49357755-49357774 MS.gene051232:intron 40.0%
CACTTCAACCACTAAACAAC+TGG - chr2.3:49357910-49357929 MS.gene051232:CDS 40.0%
CAGTTGTTTAGTGGTTGAAG+TGG + chr2.3:49357912-49357931 None:intergenic 40.0%
CCAAACAGAAATTCAGCTAG+AGG - chr2.3:49355650-49355669 MS.gene051232:intron 40.0%
CCCCATCTTAATCATAGCAT+AGG + chr2.3:49357981-49358000 None:intergenic 40.0%
CCTCTAGCTGAATTTCTGTT+TGG + chr2.3:49355653-49355672 None:intergenic 40.0%
CTTAGTGAGTCAAATGGAGA+AGG + chr2.3:49355992-49356011 None:intergenic 40.0%
GAGGCCAATTTATTGTGCAT+AGG - chr2.3:49355245-49355264 MS.gene051232:intron 40.0%
! GTAGAGCTACTGCATGTTTT+TGG - chr2.3:49354737-49354756 MS.gene051232:CDS 40.0%
! GTTAGTGGATCAAAGCTAAG+GGG - chr2.3:49356348-49356367 MS.gene051232:intron 40.0%
!!! ATCCAACATTTTTGGCTCTC+AGG - chr2.3:49355571-49355590 MS.gene051232:intron 40.0%
!!! TCCAACATTTTTGGCTCTCA+GGG - chr2.3:49355572-49355591 MS.gene051232:intron 40.0%
ACCCTGAGAGCCAAAAATGT+TGG + chr2.3:49355576-49355595 None:intergenic 45.0%
CCTAGCTGAACGTACCAAAA+AGG + chr2.3:49355920-49355939 None:intergenic 45.0%
GATCAAAGCTAAGGGGTGAA+AGG - chr2.3:49356355-49356374 MS.gene051232:intron 45.0%
GATGGTTCAGTTCTGCTTGA+TGG - chr2.3:49355599-49355618 MS.gene051232:intron 45.0%
GTGTTACCATCTCCATCTTG+TGG + chr2.3:49357770-49357789 None:intergenic 45.0%
TCAGTGGAGAGTTCATGTAG+TGG - chr2.3:49355701-49355720 MS.gene051232:intron 45.0%
TCTCCCTCAGAACCAATAAG+TGG + chr2.3:49358013-49358032 None:intergenic 45.0%
TCTTACAAGTGGGAGTTTGG+TGG + chr2.3:49356427-49356446 None:intergenic 45.0%
TTGTGTCCACAAGATGGAGA+TGG - chr2.3:49357761-49357780 MS.gene051232:intron 45.0%
!! CCTTTTTGGTACGTTCAGCT+AGG - chr2.3:49355917-49355936 MS.gene051232:intron 45.0%
!! TTGGTTCTGAGGGAGAGATT+AGG - chr2.3:49358017-49358036 MS.gene051232:CDS 45.0%
!! ATATTATATTAGAAAAAAAA+AGG - chr2.3:49356995-49357014 MS.gene051232:intron 5.0%
!!! ATAAGTAAAATTTTTTTTAT+AGG + chr2.3:49357138-49357157 None:intergenic 5.0%
!!! TAAGTAAAATTTTTTTTATA+GGG + chr2.3:49357137-49357156 None:intergenic 5.0%
!!! TTTTTTTTCTAATATAATAT+GGG + chr2.3:49356995-49357014 None:intergenic 5.0%
!!! TTTTTTTTTCTAATATAATA+TGG + chr2.3:49356996-49357015 None:intergenic 5.0%
ACCTAGCTCGTCCAATAGTG+TGG + chr2.3:49357649-49357668 None:intergenic 50.0%
CCTAGCTCGTCCAATAGTGT+GGG + chr2.3:49357648-49357667 None:intergenic 50.0%
TCTCTAGGTGCCCACACTAT+TGG - chr2.3:49357635-49357654 MS.gene051232:intron 50.0%
! GGGGTAAGTTGAGGTCTCAT+AGG + chr2.3:49354796-49354815 None:intergenic 50.0%
! TGTAGAGTGGGGGTCCTTTT+TGG - chr2.3:49355903-49355922 MS.gene051232:intron 50.0%
!! TTTGGCTCTCAGGGTTGTGA+TGG - chr2.3:49355581-49355600 MS.gene051232:intron 50.0%
CCCACACTATTGGACGAGCT+AGG - chr2.3:49357645-49357664 MS.gene051232:intron 55.0%
GCTAGGACGCAGAGATGGAT+TGG - chr2.3:49355934-49355953 MS.gene051232:intron 55.0%
GTTCAGCTAGGACGCAGAGA+TGG - chr2.3:49355929-49355948 MS.gene051232:intron 55.0%
!! GGGAGTTTGGTGGTGAGCTA+TGG + chr2.3:49356417-49356436 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 49354724 49358066 49354724 ID=MS.gene051232
chr2.3 mRNA 49354724 49358066 49354724 ID=MS.gene051232.t1;Parent=MS.gene051232
chr2.3 exon 49357845 49358066 49357845 ID=MS.gene051232.t1.exon1;Parent=MS.gene051232.t1
chr2.3 CDS 49357845 49358066 49357845 ID=cds.MS.gene051232.t1;Parent=MS.gene051232.t1
chr2.3 exon 49357012 49357197 49357012 ID=MS.gene051232.t1.exon2;Parent=MS.gene051232.t1
chr2.3 CDS 49357012 49357197 49357012 ID=cds.MS.gene051232.t1;Parent=MS.gene051232.t1
chr2.3 exon 49356717 49356882 49356717 ID=MS.gene051232.t1.exon3;Parent=MS.gene051232.t1
chr2.3 CDS 49356717 49356882 49356717 ID=cds.MS.gene051232.t1;Parent=MS.gene051232.t1
chr2.3 exon 49354724 49355148 49354724 ID=MS.gene051232.t1.exon4;Parent=MS.gene051232.t1
chr2.3 CDS 49354724 49355148 49354724 ID=cds.MS.gene051232.t1;Parent=MS.gene051232.t1
Gene Sequence

>MS.gene051232

ATGAATAAATCATGTAGAGCTACTGCATGTTTTTGGCTTATGAGTTTCTTCATTTTGAGTGTGGCTGAACCTATGAGACCTCAACTTACCCCATATTTTTACAGGACAACTTGCCCTGATCTTTTTACAATAGTTAGAAGAGAAGTTCTTAATGCAATAAATGAAGAGATTCGAATGGCTGCTTCTTTGCTTCGTCTTCACTTCCATGATTGCTTTGTAAATGTAAGTAAGTTAGAGCTACTAGTAGATTATTTTTACTTCTCATGATATAACAATATATACTTTACCTACTTCAATAAAACTATACAATAATATTAAAACTATATTTTTTAATACAAATTCAAATCTTATATAGCCGTAGGGTGATGTTATTTACAAGTAAATAGATTTTAGTTATTGAAATTGTAAAAGTTGATAAATTTGAGAAATAGAAAGAAAAAAATTTAACTTATAATTTTTTTTTTTACAAAATATCAACCAATTTTCTCAAATTTTGCACCACAAATTTTAAGAGACGACTTGAGGCCAATTTATTGTGCATAGGTGAGATAAGTCTTGCATCGTCCATAAACCTATTTTCACTATTGGATCAATAAATATCACCATTGAATCAAATGAGATATGATGAGACTTATTGATCTAATGGTGAAAAACATGCTTATGTATGGTACAAGAGTATTTTATTCACGCACATTAGACAAAACATGTTTTGATGCCACAAAATACTATTTAAATAAACATGTATATGTATGTCGTTTATTTGATCTGAAAGAAATTTTTTATAAGCATTGGAATATAGTATTAAATTTCTATGTAGTATTCTCTTCTTTATTTTACCTTTTTGTTTATCCAACATTTTTGGCTCTCAGGGTTGTGATGGTTCAGTTCTGCTTGATGGAGACGAAGATATTGAGAAATTTGCAACTCCAAACAGAAATTCAGCTAGAGGATTTGAAGTCATAGATAGAATCAAAAGTTCAGTGGAGAGTTCATGTAGTGGAGTTGTGTCATGTGCTGATATATTAGCCATAGTTGCTAGAGATTCTGTTCACCTAGTATGTTCAAGTTCAATTATTAAATATTCATAACTAATCATGCAAATATTAAAACAAATCTCTCTTTTAATTAGCAAATAATTTTCTAAATTTATGTTTAGCTTAATTAATTGTGATCATATTTTGTAGAGTGGGGGTCCTTTTTGGTACGTTCAGCTAGGACGCAGAGATGGATTGGTCTCAAATAAAACACTGGCAAATAATGCAATTCCTTCTCCATTTGACTCACTAAGTACTATCATTTCCAAGTTTGATAACGTTGGTCTTAGTGTTAAAGACGTTGTTACTTTATCAGGTATAATCCTATAGTCAAATTAATTATTTGAAATCTCATTTGTCAAAAAAGTTACATAGAGGGTCTTTTGTTATCTAATGTCCCTATCAAAAGAAATTCAGATTAATTTAGAAATTTTTGAGGAGTATTTTTTGAACATGAAATGTTAATGAATTTAAGCTAAGGGGTGAATGAGTCAAATTAGTTAAAGGACGTGTTTAATTCTAATGTAGAAGAAATATTAACATAACGATTAATATATTAACCTATAAAATAATTCATAGTTTTTGTCTTTGTTAGTGGATCAAAGCTAAGGGGTGAAAGGGATCAAAGCCCTAACCTCCAATCAAACTCTTACAATCCATAGCTCACCACCAAACTCCCACTTGTAAGATATTTTTGGAGAGTTTATTTGGACTTATTTTATGATATAAACACTTGTATGCGTGTTTAGAAGTGTTTATAAAAATAATTTAAGTTACTACATACATGTCTATAAATTTCATATTTTCATAAATTTTCCCAAATAGCTTATAGAAACAAATAATATGAGATAGTTTAGTTTGAGTTGTAAGATATCTATAAAGTATATGTAACTTATTTTCATTAACTTTTTGGAATAGTTTATGGTCCGTTTTGATTGACTTATTTTTGAGCTTATGAAAAATAGCTTATGTAAATAAATAAGCTTTTACGTTAATTTATATGTTCTTATCAACGAAACTTATATCTTCCTAAGTTGTTATTTCATAAACTACCTTGACAAGATTATGAATAATACATAAAAGTTTATTTATTTACATAAATTGTTTTACATGAACTAAAAAATAAGACAATTCAAACGGACACTAGGATCTTATGCTAAGTTTTTTTGTCATTTTCTCTTCAATTGTTGCGTAAGCACTTGATTAACTATGTTTTGTTAATGCATTTTTTCCCCCCATATTATATTAGAAAAAAAAAGGAAATTACTTGCTTACTTTTCCTCTAAATTGAATTTAGGGTTAATTATGTTTCTAGTCCCTATAAAATAGCGACCTTGTAAGTTTAGTCCCTACTTAATTTTAATAGCATTTTTAGTCCCTATAAAAAAAATTTTACTTATAATTTTAGTCCCTGCTAAAACAAAGTTTGATTAATTATCCTTAAACTCTTAAATTTTTGAACGATATTTTTGAGACAAGATTAGAACACTATGAAAGGTTCGTTTACTAAAATTTAGAATTTTCTGACATGAAATGAATTAAATATGAATTTTTTAAAACGACAAAAGTTAAAGATAAAAAGTAATAAAATCTGGATGTAGAAATCAAATTTTGCAATAATTTTTTGCGGACGAACTTTTAGTAATGTTCTAAACATGTCTGCAAAAAATTGTTCAAAAATTTAAGAGTTTAAGCATAAATTAAACAAATTTGAATTGAGTAGGGACTAATACTCAGTGCAGAAAAACAAAATTAGGGACTAAAAATGCTATTAAAATTAAGTAGGGACTAAACTTACAAGGTCGCTATTTTATAGGGACTAGAAACATAATTAACCCCTGAATTTATTACCAATTTCTATTTATGCATTCTAATATTCTCTAGGTGCCCACACTATTGGACGAGCTAGGTGCACATTTTTTAGCAACAGATTATTCAACTTCTCTGGAACACAAGAACCAGACAATACTTTAGAATATGAAATGCTAACTGAATTGCAAAACTTGTGTCCACAAGATGGAGATGGTAACACAACTACTGTTCTAGATCCATACTCAGCTGATCAATTTGATAACAATTACTTCAAGAATTTGCTTAATGGAAAGGGTCTCCTTAGCTCTGACCAAATTCTCTTTTCAAGTGATGAAGAAACCACTTCAACCACTAAACAACTGGTTCAATATTATAGTGAGAATGAAAGAATTTTTTTTATGGAATTTGCCTATGCTATGATTAAGATGGGGAATATAAATCCACTTATTGGTTCTGAGGGAGAGATTAGGAAGAGCTGTAGAGTGATTAATTCTTAA
Protein sequence

>MS.gene051232.t1

MNKSCRATACFWLMSFFILSVAEPMRPQLTPYFYRTTCPDLFTIVRREVLNAINEEIRMAASLLRLHFHDCFVNGCDGSVLLDGDEDIEKFATPNRNSARGFEVIDRIKSSVESSCSGVVSCADILAIVARDSVHLSGGPFWYVQLGRRDGLVSNKTLANNAIPSPFDSLSTIISKFDNVGLSVKDVVTLSGAHTIGRARCTFFSNRLFNFSGTQEPDNTLEYEMLTELQNLCPQDGDGNTTTVLDPYSADQFDNNYFKNLLNGKGLLSSDQILFSSDEETTSTTKQLVQYYSENERIFFMEFAYAMIKMGNINPLIGSEGEIRKSCRVINS