AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012254

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012254.t1 MTR_4g125940 80.515 272 53 0 1 272 3 274 8.63e-163 452
MS.gene012254.t1 MTR_4g125940 80.515 272 53 0 1 272 58 329 5.44e-162 452
MS.gene012254.t1 MTR_2g040000 70.696 273 79 1 1 272 59 331 1.62e-139 396
MS.gene012254.t1 MTR_1g054205 60.000 275 105 2 1 272 54 326 1.85e-115 335
MS.gene012254.t1 MTR_7g093370 59.273 275 107 2 1 272 99 371 3.88e-112 328
MS.gene012254.t1 MTR_2g029560 55.474 274 118 2 1 272 54 325 4.92e-100 296
MS.gene012254.t1 MTR_5g021060 55.109 274 118 2 1 272 60 330 2.07e-99 294
MS.gene012254.t1 MTR_8g076820 55.474 274 117 2 1 272 60 330 5.79e-98 290
MS.gene012254.t1 MTR_2g029815 53.650 274 123 2 1 272 59 330 3.63e-97 289
MS.gene012254.t1 MTR_2g028980 54.015 274 122 2 1 272 59 330 6.88e-97 288
MS.gene012254.t1 MTR_5g017850 54.909 275 116 4 1 272 57 326 1.92e-96 286
MS.gene012254.t1 MTR_2g029740 54.015 274 122 2 1 272 59 330 8.50e-96 286
MS.gene012254.t1 MTR_5g017860 54.182 275 118 4 1 272 57 326 1.89e-95 284
MS.gene012254.t1 MTR_2g029730 54.380 274 121 2 1 272 55 326 6.65e-95 283
MS.gene012254.t1 MTR_5g083860 54.710 276 110 5 1 272 61 325 7.14e-95 282
MS.gene012254.t1 MTR_2g029830 52.920 274 125 2 1 272 58 329 1.41e-94 283
MS.gene012254.t1 MTR_2g029800 52.190 274 127 2 1 272 59 330 3.46e-93 279
MS.gene012254.t1 MTR_2g029820 51.825 274 128 2 1 272 59 330 9.27e-93 278
MS.gene012254.t1 MTR_3g094650 54.212 273 110 5 1 269 58 319 1.97e-92 276
MS.gene012254.t1 MTR_4g122640 50.000 274 130 3 1 272 68 336 2.61e-92 276
MS.gene012254.t1 MTR_2g029860 52.555 274 126 2 1 272 59 330 3.70e-92 276
MS.gene012254.t1 MTR_4g083710 53.069 277 116 4 1 272 57 324 9.04e-92 274
MS.gene012254.t1 MTR_2g029750 52.555 274 126 2 1 272 59 330 1.02e-91 275
MS.gene012254.t1 MTR_3g072190 53.650 274 114 3 1 272 56 318 1.51e-90 271
MS.gene012254.t1 MTR_2g029850 51.825 274 128 2 1 272 59 330 9.38e-90 270
MS.gene012254.t1 MTR_4g029170 52.536 276 116 5 1 272 57 321 1.13e-89 269
MS.gene012254.t1 MTR_5g074970 52.878 278 114 5 1 272 60 326 2.25e-89 268
MS.gene012254.t1 MTR_4g029200 51.095 274 121 3 1 272 76 338 2.75e-89 268
MS.gene012254.t1 MTR_2g084080 50.365 274 123 3 1 272 55 317 6.24e-89 267
MS.gene012254.t1 MTR_7g072480 51.825 274 119 3 1 272 54 316 6.97e-89 267
MS.gene012254.t1 MTR_2g084110 51.273 275 119 5 1 272 55 317 9.14e-89 266
MS.gene012254.t1 MTR_2g084010 50.365 274 124 3 1 272 55 318 1.43e-88 266
MS.gene012254.t1 MTR_5g014100 50.000 278 133 3 1 273 56 332 5.12e-88 265
MS.gene012254.t1 MTR_7g072510 50.365 274 123 3 1 272 50 312 5.13e-88 265
MS.gene012254.t1 MTR_3g466200 51.986 277 117 6 1 272 55 320 1.24e-87 264
MS.gene012254.t1 MTR_5g074760 52.708 277 116 6 1 272 55 321 3.08e-87 263
MS.gene012254.t1 MTR_2g084020 49.635 274 126 3 1 272 55 318 1.87e-86 261
MS.gene012254.t1 MTR_1g022970 51.460 274 129 2 1 272 76 347 2.61e-86 261
MS.gene012254.t1 MTR_4g029180 51.812 276 118 5 1 272 57 321 3.85e-86 260
MS.gene012254.t1 MTR_2g029910 50.725 276 129 4 1 272 60 332 4.79e-86 261
MS.gene012254.t1 MTR_4g074995 50.903 277 109 5 1 272 54 308 6.89e-86 259
MS.gene012254.t1 MTR_3g094670 54.348 276 111 5 1 272 58 322 1.11e-85 259
MS.gene012254.t1 MTR_4g029190 49.638 276 124 4 1 272 76 340 1.25e-85 259
MS.gene012254.t1 MTR_5g074860 50.362 276 122 6 1 271 59 324 1.40e-85 259
MS.gene012254.t1 MTR_2g084000 47.810 274 131 3 1 272 56 319 4.23e-85 257
MS.gene012254.t1 MTR_5g049280 48.913 276 134 5 2 272 64 337 6.83e-85 257
MS.gene012254.t1 MTR_5g074740 51.264 277 120 6 1 272 55 321 1.05e-84 256
MS.gene012254.t1 MTR_2g029830 51.163 258 122 2 17 272 6 261 3.45e-84 254
MS.gene012254.t1 MTR_3g094630 54.348 276 111 5 1 272 58 322 9.43e-84 254
MS.gene012254.t1 MTR_4g114210 49.458 277 128 5 1 272 51 320 1.07e-83 254
MS.gene012254.t1 MTR_2g008710 49.638 276 128 6 1 272 57 325 3.81e-83 252
MS.gene012254.t1 MTR_4g030890 47.253 273 135 4 2 272 131 396 5.85e-83 255
MS.gene012254.t1 MTR_2g084090 50.000 274 125 3 1 272 55 318 1.30e-82 251
MS.gene012254.t1 MTR_3g466180 51.095 274 121 3 1 272 61 323 4.51e-82 249
MS.gene012254.t1 MTR_4g031140 45.956 272 138 4 3 272 60 324 1.21e-81 249
MS.gene012254.t1 MTR_4g074990 49.097 277 111 5 1 272 54 305 9.62e-81 246
MS.gene012254.t1 MTR_2g088770 48.364 275 134 5 1 272 56 325 3.77e-80 245
MS.gene012254.t1 MTR_5g074710 50.181 277 123 6 1 272 55 321 5.19e-80 244
MS.gene012254.t1 MTR_3g072190 50.958 261 115 3 14 272 2 251 1.04e-79 241
MS.gene012254.t1 MTR_1g115900 46.377 276 133 5 1 272 57 321 1.54e-78 241
MS.gene012254.t1 MTR_3g467600 48.736 277 128 5 1 272 57 324 1.00e-77 238
MS.gene012254.t1 MTR_4g046713 45.455 275 142 4 1 272 57 326 2.65e-77 238
MS.gene012254.t1 MTR_7g026990 46.715 274 132 4 1 272 61 322 3.44e-75 232
MS.gene012254.t1 MTR_3g092990 44.364 275 146 4 1 272 56 326 7.75e-75 231
MS.gene012254.t1 MTR_4g074980 46.715 274 110 5 1 272 55 294 4.29e-73 226
MS.gene012254.t1 MTR_5g022870 45.055 273 136 7 3 272 55 316 9.11e-73 226
MS.gene012254.t1 MTR_6g043280 45.255 274 136 6 1 272 71 332 9.74e-73 226
MS.gene012254.t1 MTR_4g133800 44.689 273 140 6 1 272 71 333 2.63e-72 225
MS.gene012254.t1 MTR_1g101830 44.364 275 141 7 1 272 57 322 3.22e-72 224
MS.gene012254.t1 MTR_8g075100 44.727 275 138 7 1 272 56 319 6.78e-72 223
MS.gene012254.t1 MTR_2g008160 46.014 276 137 5 2 272 55 323 1.07e-71 223
MS.gene012254.t1 MTR_7g107520 44.161 274 143 4 1 272 55 320 1.64e-71 223
MS.gene012254.t1 MTR_7g029030 45.353 269 137 4 6 272 60 320 5.24e-71 221
MS.gene012254.t1 MTR_2g008730 48.988 247 116 5 30 272 61 301 8.56e-70 218
MS.gene012254.t1 MTR_1g025980 45.221 272 136 7 3 271 56 317 1.46e-69 218
MS.gene012254.t1 MTR_6g027440 44.161 274 141 6 1 272 51 314 1.72e-69 217
MS.gene012254.t1 MTR_0155s0040 42.294 279 134 8 1 272 57 315 9.13e-68 213
MS.gene012254.t1 MTR_1g086320 43.165 278 148 5 1 272 60 333 4.06e-67 212
MS.gene012254.t1 MTR_2g437770 43.956 273 141 5 1 272 80 341 4.15e-66 209
MS.gene012254.t1 MTR_4g074980 53.171 205 85 4 1 200 55 253 4.57e-66 206
MS.gene012254.t1 MTR_7g086870 42.336 274 142 6 1 272 52 311 7.22e-66 208
MS.gene012254.t1 MTR_5g074860 45.290 276 97 8 1 271 59 285 2.57e-65 206
MS.gene012254.t1 MTR_1g090760 40.580 276 155 4 2 272 59 330 2.76e-65 207
MS.gene012254.t1 MTR_7g086820 40.511 274 150 6 1 272 50 312 9.36e-65 205
MS.gene012254.t1 MTR_2g099175 40.794 277 152 4 1 272 66 335 9.48e-65 206
MS.gene012254.t1 MTR_1g038680 42.086 278 151 5 1 272 59 332 1.03e-64 206
MS.gene012254.t1 MTR_3g092990 43.243 259 140 4 17 272 61 315 1.35e-64 205
MS.gene012254.t1 MTR_4g087965 43.704 270 141 5 6 268 77 342 1.44e-64 206
MS.gene012254.t1 MTR_1g077000 42.545 275 139 7 1 272 69 327 2.10e-64 204
MS.gene012254.t1 MTR_5g016010 41.328 271 150 4 6 271 62 328 5.34e-64 204
MS.gene012254.t1 MTR_2g067440 39.474 304 147 7 1 272 90 388 7.59e-64 205
MS.gene012254.t1 MTR_4g127670 43.173 271 144 4 2 268 55 319 1.68e-63 202
MS.gene012254.t1 MTR_1g009750 41.455 275 153 4 2 272 58 328 2.53e-63 202
MS.gene012254.t1 MTR_2g077990 40.066 302 142 6 1 268 106 402 2.68e-63 204
MS.gene012254.t1 MTR_6g043240 42.857 273 142 5 1 272 72 331 3.51e-63 202
MS.gene012254.t1 MTR_1g086490 41.404 285 150 5 1 272 60 340 9.84e-63 201
MS.gene012254.t1 MTR_4g095450 42.435 271 142 5 6 271 62 323 1.29e-62 200
MS.gene012254.t1 MTR_2g078610 39.073 302 145 6 1 268 106 402 2.21e-62 202
MS.gene012254.t1 MTR_2g078280 39.236 288 136 6 1 254 106 388 1.88e-58 191
MS.gene012254.t1 MTR_8g062780 38.545 275 161 3 2 272 54 324 5.20e-57 186
MS.gene012254.t1 MTR_2g008160 40.217 276 118 5 2 272 55 288 2.74e-56 182
MS.gene012254.t1 MTR_0286s0010 39.855 276 155 7 2 272 65 334 3.16e-53 176
MS.gene012254.t1 MTR_6g008075 39.855 276 155 7 2 272 65 334 3.16e-53 176
MS.gene012254.t1 MTR_5g033470 37.050 278 162 6 3 272 105 377 4.45e-53 177
MS.gene012254.t1 MTR_5g074700 43.697 238 107 6 38 272 1 214 4.58e-53 172
MS.gene012254.t1 MTR_2g067450 39.068 279 146 8 5 271 44 310 9.16e-53 174
MS.gene012254.t1 MTR_1g009750 38.462 273 147 5 2 272 58 311 1.43e-52 174
MS.gene012254.t1 MTR_3g105790 38.007 271 158 4 5 272 59 322 4.08e-52 173
MS.gene012254.t1 MTR_6g043460 39.338 272 148 7 1 268 66 324 5.69e-52 173
MS.gene012254.t1 MTR_0147s0010 36.111 288 148 5 1 268 107 378 1.92e-51 172
MS.gene012254.t1 MTR_1g066710 35.145 276 164 5 2 272 58 323 1.02e-50 169
MS.gene012254.t1 MTR_4g132490 35.401 274 166 4 3 272 61 327 1.67e-50 169
MS.gene012254.t1 MTR_4g132110 36.594 276 160 5 2 272 63 328 4.79e-48 162
MS.gene012254.t1 MTR_1g066680 35.018 277 163 6 2 272 57 322 1.91e-47 160
MS.gene012254.t1 MTR_1g066640 35.018 277 163 6 2 272 58 323 5.88e-47 159
MS.gene012254.t1 MTR_1g066380 35.018 277 163 6 2 272 58 323 1.27e-46 159
MS.gene012254.t1 MTR_4g132110 35.943 281 160 6 2 272 63 333 4.50e-46 157
MS.gene012254.t1 MTR_3g072210 44.330 194 97 3 80 272 55 238 4.63e-45 152
MS.gene012254.t1 MTR_7g072490 41.841 239 72 6 17 253 2 175 8.97e-44 148
MS.gene012254.t1 MTR_2g029880 44.271 192 95 3 81 272 9 188 3.33e-43 146
MS.gene012254.t1 MTR_1g066380 33.712 264 158 6 15 272 3 255 1.29e-41 144
MS.gene012254.t1 MTR_3g105790 36.546 249 149 4 27 272 4 246 5.76e-41 142
MS.gene012254.t1 MTR_2g008160 52.632 133 61 2 2 134 55 185 3.72e-40 138
MS.gene012254.t1 MTR_2g077980 33.451 284 144 11 28 272 8 285 5.50e-32 119
MS.gene012254.t1 MTR_2g078560 32.743 226 117 4 74 268 95 316 2.04e-30 116
MS.gene012254.t1 MTR_3g072260 69.231 78 22 1 1 76 56 133 1.15e-27 104
MS.gene012254.t1 MTR_3g462850 38.095 147 86 4 129 272 5 149 2.44e-26 101
MS.gene012254.t1 MTR_6g048160 67.143 70 21 2 10 79 22 89 8.77e-25 95.1
MS.gene012254.t1 MTR_7g086790 32.804 189 103 5 18 204 17 183 8.26e-23 93.2
MS.gene012254.t1 MTR_4g114220 59.459 74 22 2 5 78 37 102 7.76e-22 89.0
MS.gene012254.t1 MTR_4g031040 31.395 172 74 3 31 202 4 131 3.12e-19 82.0
MS.gene012254.t1 MTR_5g058120 34.146 164 93 3 105 268 7 155 1.52e-18 83.2
MS.gene012254.t1 MTR_5g074770 45.161 93 47 3 179 271 20 108 3.72e-16 72.8
MS.gene012254.t1 MTR_1g098320 43.373 83 43 1 190 272 46 124 9.35e-16 72.8
MS.gene012254.t1 MTR_1g089005 44.944 89 40 3 1 81 45 132 3.65e-13 66.2
MS.gene012254.t1 MTR_3g107060 26.394 269 120 8 2 253 105 312 3.97e-13 68.6
MS.gene012254.t1 MTR_2g029930 50.000 66 17 3 3 52 37 102 4.47e-12 61.6
MS.gene012254.t1 MTR_7g086810 36.905 84 29 1 3 86 38 97 1.42e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012254.t1 AT5G19890 68.015 272 83 3 1 272 60 327 4.68e-130 372
MS.gene012254.t1 AT5G06730 61.679 274 101 2 1 272 63 334 1.40e-116 339
MS.gene012254.t1 AT5G06720 58.029 274 111 2 1 272 62 333 1.52e-111 325
MS.gene012254.t1 AT2G38390 56.884 276 114 3 1 273 61 334 1.26e-108 318
MS.gene012254.t1 AT4G36430 57.664 274 111 2 1 272 60 330 1.64e-107 315
MS.gene012254.t1 AT2G38380 56.884 276 114 3 1 273 61 334 1.88e-106 313
MS.gene012254.t1 AT2G18150 56.934 274 113 2 1 272 66 336 9.89e-106 310
MS.gene012254.t1 AT3G32980 54.545 275 121 3 1 272 61 334 7.63e-101 298
MS.gene012254.t1 AT2G18140 54.380 274 120 2 1 272 65 335 3.24e-100 296
MS.gene012254.t1 AT3G49120 55.273 275 119 3 1 272 62 335 2.96e-99 295
MS.gene012254.t1 AT5G66390 54.380 274 120 2 1 272 63 333 6.42e-99 293
MS.gene012254.t1 AT4G08770 53.818 275 123 3 1 272 54 327 9.65e-99 293
MS.gene012254.t1 AT3G49110 54.545 275 121 3 1 272 63 336 2.12e-98 292
MS.gene012254.t1 AT4G08780 52.727 275 126 3 1 272 54 327 1.15e-96 288
MS.gene012254.t1 AT3G50990 52.174 276 123 4 1 272 71 341 2.14e-94 282
MS.gene012254.t1 AT5G19880 53.069 277 123 3 1 272 55 329 5.24e-92 275
MS.gene012254.t1 AT1G49570 54.945 273 114 4 1 268 78 346 2.10e-91 275
MS.gene012254.t1 AT5G58390 53.791 277 112 6 1 272 51 316 1.78e-90 271
MS.gene012254.t1 AT5G05340 52.381 273 113 5 1 268 60 320 4.37e-90 270
MS.gene012254.t1 AT1G44970 53.285 274 124 2 1 272 75 346 1.44e-88 267
MS.gene012254.t1 AT1G14550 50.000 276 124 6 1 272 56 321 1.33e-86 261
MS.gene012254.t1 AT5G58400 51.625 277 118 6 1 272 60 325 3.98e-85 258
MS.gene012254.t1 AT4G16270 49.091 275 131 5 1 272 80 348 1.11e-83 254
MS.gene012254.t1 AT2G35380 50.000 278 131 5 1 272 60 335 2.68e-83 253
MS.gene012254.t1 AT1G68850 45.848 277 142 5 2 272 61 335 3.75e-83 253
MS.gene012254.t1 AT2G41480 48.375 277 131 5 1 272 59 328 2.00e-82 251
MS.gene012254.t1 AT1G14540 47.080 274 134 3 1 272 51 315 2.69e-81 247
MS.gene012254.t1 AT5G64120 47.426 272 135 5 1 272 65 328 7.30e-81 247
MS.gene012254.t1 AT2G22420 44.322 273 143 4 2 272 54 319 1.10e-79 244
MS.gene012254.t1 AT5G17820 46.324 272 134 5 1 272 54 313 2.08e-78 240
MS.gene012254.t1 AT4G25980 45.487 277 140 5 1 272 56 326 2.28e-77 238
MS.gene012254.t1 AT5G17820 46.324 272 134 5 1 272 107 366 4.07e-77 238
MS.gene012254.t1 AT1G05260 44.803 279 138 5 1 272 56 325 1.02e-76 236
MS.gene012254.t1 AT5G64110 45.985 274 137 5 2 272 65 330 2.55e-75 233
MS.gene012254.t1 AT4G11290 44.203 276 146 4 1 272 55 326 9.69e-75 231
MS.gene012254.t1 AT5G39580 47.253 273 135 6 1 272 55 319 7.91e-74 228
MS.gene012254.t1 AT5G15180 43.223 273 149 4 1 272 62 329 2.79e-73 228
MS.gene012254.t1 AT3G03670 46.570 277 135 6 1 272 53 321 3.51e-73 227
MS.gene012254.t1 AT4G37530 44.526 274 143 4 4 272 60 329 9.82e-73 226
MS.gene012254.t1 AT5G42180 45.290 276 130 7 3 271 55 316 1.21e-71 223
MS.gene012254.t1 AT4G37520 42.701 274 148 4 4 272 60 329 2.09e-70 220
MS.gene012254.t1 AT1G05240 43.750 272 143 6 1 268 56 321 7.26e-70 219
MS.gene012254.t1 AT1G05250 43.750 272 143 6 1 268 56 321 7.26e-70 219
MS.gene012254.t1 AT3G01190 44.322 273 144 5 1 272 56 321 1.62e-69 218
MS.gene012254.t1 AT5G64100 44.280 271 144 5 2 272 68 331 6.83e-69 216
MS.gene012254.t1 AT2G35380 47.368 247 124 4 30 272 3 247 2.47e-68 212
MS.gene012254.t1 AT4G37520 41.971 274 147 5 4 272 60 326 2.84e-67 212
MS.gene012254.t1 AT5G51890 42.701 274 144 7 3 272 58 322 3.77e-67 211
MS.gene012254.t1 AT3G21770 42.857 273 148 6 1 270 59 326 5.42e-67 211
MS.gene012254.t1 AT4G30170 42.545 275 147 5 2 272 58 325 7.06e-66 208
MS.gene012254.t1 AT1G71695 41.667 276 147 6 1 272 74 339 7.84e-66 209
MS.gene012254.t1 AT5G24070 41.155 277 150 6 1 272 67 335 2.53e-65 207
MS.gene012254.t1 AT2G18980 42.545 275 147 5 2 272 56 323 6.24e-65 206
MS.gene012254.t1 AT5G14130 42.491 273 150 4 2 272 63 330 9.24e-65 206
MS.gene012254.t1 AT5G14130 42.491 273 150 4 2 272 104 371 1.94e-64 206
MS.gene012254.t1 AT3G49960 41.241 274 152 4 4 272 60 329 5.92e-63 201
MS.gene012254.t1 AT4G33870 37.255 306 148 6 1 268 98 397 1.23e-62 202
MS.gene012254.t1 AT1G77100 41.176 272 152 3 2 272 55 319 1.46e-62 199
MS.gene012254.t1 AT2G43480 41.155 277 150 5 1 272 67 335 2.78e-62 199
MS.gene012254.t1 AT4G33420 42.545 275 139 7 1 272 67 325 1.14e-61 197
MS.gene012254.t1 AT2G39040 43.060 281 145 6 1 272 76 350 1.56e-61 198
MS.gene012254.t1 AT4G17690 41.091 275 149 5 2 272 57 322 2.18e-61 197
MS.gene012254.t1 AT5G67400 41.241 274 152 4 4 272 60 329 2.22e-61 197
MS.gene012254.t1 AT4G33420 42.545 275 139 7 1 272 114 372 6.06e-61 197
MS.gene012254.t1 AT2G34060 40.794 277 153 5 2 271 73 345 2.30e-60 195
MS.gene012254.t1 AT5G47000 40.364 275 152 5 2 272 64 330 1.72e-59 192
MS.gene012254.t1 AT4G37530 45.455 220 115 3 4 218 60 279 2.58e-59 190
MS.gene012254.t1 AT1G30870 41.026 273 144 7 1 268 81 341 6.00e-59 191
MS.gene012254.t1 AT4G26010 40.000 275 145 7 1 272 52 309 6.89e-58 187
MS.gene012254.t1 AT4G26010 40.000 275 145 7 1 272 80 337 1.40e-57 187
MS.gene012254.t1 AT5G22410 39.350 277 148 9 1 269 58 322 4.73e-56 183
MS.gene012254.t1 AT3G28200 37.455 275 158 5 2 272 52 316 1.75e-55 181
MS.gene012254.t1 AT5G40150 37.818 275 158 5 2 272 63 328 1.04e-54 180
MS.gene012254.t1 AT1G24110 37.818 275 162 5 2 272 53 322 8.61e-54 177
MS.gene012254.t1 AT1G34510 37.455 275 152 7 1 272 52 309 5.09e-53 175
MS.gene012254.t1 AT4G31760 35.793 271 164 5 5 272 63 326 1.56e-51 171
MS.gene012254.t1 AT2G24800 37.868 272 158 6 5 272 65 329 2.62e-51 171
MS.gene012254.t1 AT4G21960 34.643 280 160 6 2 272 62 327 3.38e-49 166
MS.gene012254.t1 AT2G37130 34.058 276 168 5 2 272 30 296 2.10e-46 157
MS.gene012254.t1 AT2G37130 34.058 276 168 5 2 272 61 327 6.20e-46 157
MS.gene012254.t1 AT4G25980 52.174 138 64 2 1 138 101 236 1.26e-41 145
MS.gene012254.t1 AT5G39580 54.545 143 62 3 1 143 55 194 5.64e-40 139
MS.gene012254.t1 AT3G17070 31.769 277 175 5 3 272 70 339 1.22e-38 138
MS.gene012254.t1 AT3G17070 29.963 267 172 6 13 272 18 276 5.96e-32 119
MS.gene012254.t1 AT2G24800 45.522 134 71 2 5 138 65 196 1.99e-28 109
MS.gene012254.t1 AT3G42570 34.021 97 63 1 41 136 53 149 1.10e-12 64.7

Find 45 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATGTTTCCATTTCCATTT+TGG 0.191369 8.1:+6115079 None:intergenic
AAAGATGTTGTTTCTTTATC+AGG 0.213658 8.1:-6117899 MS.gene012254:intron
CCTAATATCAACTCTGTTAG+AGG 0.217344 8.1:-6118511 MS.gene012254:CDS
TTTGAAACGATAGAATTTAA+TGG 0.220638 8.1:+6117947 None:intergenic
CCTCTAACAGAGTTGATATT+AGG 0.295967 8.1:+6118511 None:intergenic
CAAAATCTGTGTCCCCAAAA+TGG 0.302919 8.1:-6115093 MS.gene012254:CDS
GGCAGACTGGTGGTCCTTCA+TGG 0.335802 8.1:-6118048 MS.gene012254:intron
CATTAGAAGAAAACAGGATT+TGG 0.361330 8.1:+6114968 None:intergenic
ACATAACTGCTGTTCTTGAT+AGG 0.373118 8.1:-6115062 MS.gene012254:CDS
CTGTGTCCCCAAAATGGAAA+TGG 0.390812 8.1:-6115087 MS.gene012254:CDS
TAGTGATTGTCAAATATATC+AGG 0.408801 8.1:+6115033 None:intergenic
ATAGAATTTAATGGTTCAAA+TGG 0.410411 8.1:+6117956 None:intergenic
TGTGAAGGTGCTCATACGTT+TGG 0.410956 8.1:-6115213 MS.gene012254:intron
TTGCTATAGCTCTGGACTAA+AGG 0.434059 8.1:+6114925 None:intergenic
GTTTCAAAGTTTAATGATGT+AGG 0.438191 8.1:-6117932 MS.gene012254:CDS
TGACAAAGTCTTCATAGAAA+AGG 0.439432 8.1:+6114893 None:intergenic
GATGGATCAATATTATTAGA+TGG 0.443367 8.1:-6118562 MS.gene012254:CDS
TGGCCTCATTAGAAGAAAAC+AGG 0.444904 8.1:+6114962 None:intergenic
CAGGGTCTGTTGGACAGATC+AGG 0.458499 8.1:-6114834 MS.gene012254:CDS
TGTCAAATCTATGATCAAGA+TGG 0.466633 8.1:-6114875 MS.gene012254:CDS
TACAAGGTGAACAGAATCTC+TGG 0.470452 8.1:+6118402 None:intergenic
AAGAACTTGCTCAATGGAAA+GGG 0.472752 8.1:-6115006 MS.gene012254:CDS
TTTCAAAGTTTAATGATGTA+GGG 0.472928 8.1:-6117931 MS.gene012254:CDS
GTCAAATCTATGATCAAGAT+GGG 0.474767 8.1:-6114874 MS.gene012254:CDS
TAAGAACTTGCTCAATGGAA+AGG 0.478443 8.1:-6115007 MS.gene012254:CDS
AAATATTATTGCTATAGCTC+TGG 0.480400 8.1:+6114917 None:intergenic
AGAGATGGAACAGTCTCAAA+TGG 0.490887 8.1:-6118007 MS.gene012254:CDS
TTTGATTATCAGGGTTGTGA+TGG 0.492109 8.1:-6118580 MS.gene012254:intron
AACAGAATCTCTGGCAGCTA+TGG 0.495958 8.1:+6118411 None:intergenic
TAAAGGTTTAGTAGTTAAAG+TGG 0.517397 8.1:+6114942 None:intergenic
ATGGATCTCTAGCAAATTCG+AGG 0.519947 8.1:-6117988 MS.gene012254:CDS
TTTAATGGTTCAAATGGAGA+AGG 0.531665 8.1:+6117962 None:intergenic
ACAGGATTTGGTCAGAGCTA+AGG 0.537922 8.1:+6114980 None:intergenic
TGATAAAATCAAAACGGCAG+TGG 0.546211 8.1:-6118476 MS.gene012254:CDS
TTAGCCTCTAGTGTACTGTC+TGG 0.546973 8.1:+6115132 None:intergenic
AGTTATTGATAAAATCAAAA+CGG 0.557625 8.1:-6118482 MS.gene012254:CDS
AAGGTGCTCATACGTTTGGA+AGG 0.576828 8.1:-6115209 MS.gene012254:CDS
CCTAGCAAAACATTCCATGA+AGG 0.636102 8.1:+6118034 None:intergenic
TATGACGTTTGGCAGACTGG+TGG 0.641517 8.1:-6118058 MS.gene012254:intron
TCAATATTATTAGATGGTGG+TGG 0.644558 8.1:-6118556 MS.gene012254:CDS
AGGTGCTCATACGTTTGGAA+GGG 0.662910 8.1:-6115208 MS.gene012254:CDS
GCAGTGGAGAGTGCGTGCAA+TGG 0.663265 8.1:-6118460 MS.gene012254:CDS
TTCACCAGACAGTACACTAG+AGG 0.667704 8.1:-6115136 MS.gene012254:CDS
GGATCAATATTATTAGATGG+TGG 0.675175 8.1:-6118559 MS.gene012254:CDS
TCAAATCTATGATCAAGATG+GGG 0.691790 8.1:-6114873 MS.gene012254:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATAAATAAAAAAA+TGG - chr8.1:6114878-6114897 MS.gene012254:CDS 0.0%
!!! TTTTTTATAAATAAAAAAAT+GGG - chr8.1:6114879-6114898 MS.gene012254:CDS 0.0%
!! AAGATAAAAAAAATAATATG+CGG - chr8.1:6116177-6116196 MS.gene012254:intron 10.0%
!! CTAAAAAAAAAAAAGATTAT+TGG + chr8.1:6117062-6117081 None:intergenic 10.0%
!! TTATCTTAGAAAAAATATAT+TGG - chr8.1:6116003-6116022 MS.gene012254:intron 10.0%
!!! AAAAATAAGTCATTTTATAA+AGG - chr8.1:6116566-6116585 MS.gene012254:intron 10.0%
!!! AAATTGATGAAAATTTTTAT+AGG - chr8.1:6118376-6118395 MS.gene012254:intron 10.0%
!!! AATTGATGAAAATTTTTATA+GGG - chr8.1:6118377-6118396 MS.gene012254:intron 10.0%
!!! ATAATTTTAAATGACTATTA+TGG + chr8.1:6117956-6117975 None:intergenic 10.0%
!!! ATATATTTCATTTAACTTAA+AGG - chr8.1:6115450-6115469 MS.gene012254:intron 10.0%
!!! ATATTATTTTTTTTATCTTG+CGG + chr8.1:6116176-6116195 None:intergenic 10.0%
!!! CAATAATCTTTTTTTTTTTT+AGG - chr8.1:6117060-6117079 MS.gene012254:intron 10.0%
!!! GTATAAATTTTTTAAATTTC+AGG + chr8.1:6118410-6118429 None:intergenic 10.0%
!!! TAAAAATTTTCATCAATTTT+TGG + chr8.1:6118375-6118394 None:intergenic 10.0%
!!! TGAATAATCATTTTAAAATT+GGG - chr8.1:6114936-6114955 MS.gene012254:CDS 10.0%
!!! TTTTAAATTGATTTTAATGT+TGG + chr8.1:6116318-6116337 None:intergenic 10.0%
!! AAAAAATAAAAAACATGCAT+AGG - chr8.1:6115414-6115433 MS.gene012254:intron 15.0%
!! AGTTATTGATAAAATCAAAA+CGG - chr8.1:6115242-6115261 MS.gene012254:intron 15.0%
!! ATTTCAAAAAGAAGAAAAAA+AGG + chr8.1:6115497-6115516 None:intergenic 15.0%
!! TTATAAAGTAATTTATCATG+TGG - chr8.1:6118138-6118157 MS.gene012254:intron 15.0%
!! TTATTGTTATATATTTGTGA+AGG - chr8.1:6118496-6118515 MS.gene012254:CDS 15.0%
!!! AAATTGTTAATTTGATTATC+AGG - chr8.1:6115134-6115153 MS.gene012254:CDS 15.0%
!!! AATAGATTGTACAATTTTAA+TGG - chr8.1:6118559-6118578 MS.gene012254:CDS 15.0%
!!! AATTGTGCATTTTTTTTATT+AGG - chr8.1:6117836-6117855 MS.gene012254:intron 15.0%
!!! AATTGTTAATTTGATTATCA+GGG - chr8.1:6115135-6115154 MS.gene012254:CDS 15.0%
!!! ATAATTGCTAATTTTGATTT+CGG - chr8.1:6117751-6117770 MS.gene012254:intron 15.0%
!!! ATGCATGTTTTTTATTTTTT+TGG + chr8.1:6115414-6115433 None:intergenic 15.0%
!!! ATTGTGCATTTTTTTTATTA+GGG - chr8.1:6117837-6117856 MS.gene012254:intron 15.0%
!!! CATTTTTATGTCTATATATT+AGG + chr8.1:6116913-6116932 None:intergenic 15.0%
!!! GTGAATAATCATTTTAAAAT+TGG - chr8.1:6114935-6114954 MS.gene012254:CDS 15.0%
!!! TGATATTTTATTCTTTTTGT+TGG - chr8.1:6117480-6117499 MS.gene012254:intron 15.0%
!!! TTAGAGGATAATAAAATTTT+AGG + chr8.1:6116482-6116501 None:intergenic 15.0%
!!! TTATTTTTCTTTTTTGAGTA+GGG + chr8.1:6117647-6117666 None:intergenic 15.0%
!!! TTTATTTTTCTTTTTTGAGT+AGG + chr8.1:6117648-6117667 None:intergenic 15.0%
!! AAAAAAAATAATATGCGGTT+TGG - chr8.1:6116182-6116201 MS.gene012254:intron 20.0%
!! AAATCAAATAAATGTGGTTT+GGG - chr8.1:6116246-6116265 MS.gene012254:intron 20.0%
!! AAATCAAGAAAGTAATTACA+AGG + chr8.1:6115341-6115360 None:intergenic 20.0%
!! ATAGAATTTAATGGTTCAAA+TGG + chr8.1:6115771-6115790 None:intergenic 20.0%
!! ATATACTATATGCCTAAAAT+AGG - chr8.1:6115885-6115904 MS.gene012254:intron 20.0%
!! ATGTAATATACTTTCGAATT+CGG - chr8.1:6118010-6118029 MS.gene012254:CDS 20.0%
!! GAATAAAATATCACATATGT+CGG + chr8.1:6117473-6117492 None:intergenic 20.0%
!! TAATTTATCATGTGGATAAT+AGG - chr8.1:6118146-6118165 MS.gene012254:intron 20.0%
!! TATACTATATGCCTAAAATA+GGG - chr8.1:6115886-6115905 MS.gene012254:intron 20.0%
!! TTTCAAAGTTTAATGATGTA+GGG - chr8.1:6115793-6115812 MS.gene012254:intron 20.0%
!!! AATTTTTAGACACTTTGATA+AGG + chr8.1:6118060-6118079 None:intergenic 20.0%
!!! ACATGGTTTGATTTTAAAAT+AGG - chr8.1:6118316-6118335 MS.gene012254:intron 20.0%
!!! AGCTATAATTTTTTTTCTTG+AGG + chr8.1:6117612-6117631 None:intergenic 20.0%
!!! AGGGTCATATATTTTTTTTT+TGG + chr8.1:6115643-6115662 None:intergenic 20.0%
!!! GGGTCATATATTTTTTTTTT+GGG + chr8.1:6115642-6115661 None:intergenic 20.0%
!!! TATGCATGCATTTTTTTTAA+AGG + chr8.1:6115034-6115053 None:intergenic 20.0%
!!! TATTTTTCTTTTTTGAGTAG+GGG + chr8.1:6117646-6117665 None:intergenic 20.0%
!!! TTTAAAATAGGAAACATAAG+CGG - chr8.1:6118328-6118347 MS.gene012254:intron 20.0%
!!! TTTGAAACGATAGAATTTAA+TGG + chr8.1:6115780-6115799 None:intergenic 20.0%
!!! TTTTGTTTCAATCAACTTTA+TGG - chr8.1:6116992-6117011 MS.gene012254:intron 20.0%
! AAATATTATTGCTATAGCTC+TGG + chr8.1:6118810-6118829 None:intergenic 25.0%
! ACATAGACAAGTTAAAAACA+TGG - chr8.1:6116422-6116441 MS.gene012254:intron 25.0%
! AGTCACATAAAATAGAGATA+TGG - chr8.1:6117506-6117525 MS.gene012254:intron 25.0%
! ATACTATATGCCTAAAATAG+GGG - chr8.1:6115887-6115906 MS.gene012254:intron 25.0%
! CAAACCAAATCAAATAAATG+TGG - chr8.1:6116240-6116259 MS.gene012254:intron 25.0%
! CAAACCACATTTATTTGATT+TGG + chr8.1:6116247-6116266 None:intergenic 25.0%
! CAAATCAAATAAATGTGGTT+TGG - chr8.1:6116245-6116264 MS.gene012254:intron 25.0%
! CTTTAGCATTCTTACAAAAT+AGG + chr8.1:6116459-6116478 None:intergenic 25.0%
! GATGGATCAATATTATTAGA+TGG - chr8.1:6115162-6115181 MS.gene012254:CDS 25.0%
! GCAATATATATCTTAAGCAA+CGG + chr8.1:6114971-6114990 None:intergenic 25.0%
! GTCACATAAAATAGAGATAT+GGG - chr8.1:6117507-6117526 MS.gene012254:intron 25.0%
! GTTTCAAAGTTTAATGATGT+AGG - chr8.1:6115792-6115811 MS.gene012254:intron 25.0%
! TAAAATCAACAACTTATACG+AGG - chr8.1:6117429-6117448 MS.gene012254:intron 25.0%
! TAAAGGTTTAGTAGTTAAAG+TGG + chr8.1:6118785-6118804 None:intergenic 25.0%
! TAGAAAATGTTGAAGTTTGT+TGG + chr8.1:6118260-6118279 None:intergenic 25.0%
! TAGTGATTGTCAAATATATC+AGG + chr8.1:6118694-6118713 None:intergenic 25.0%
! TCACATAAAATAGAGATATG+GGG - chr8.1:6117508-6117527 MS.gene012254:intron 25.0%
! TGAATTAGTTAACATACACA+CGG + chr8.1:6118470-6118489 None:intergenic 25.0%
!! AGTTTAGTGATGAAAGATTT+TGG + chr8.1:6117364-6117383 None:intergenic 25.0%
!! ATCAAAGTGTCTAAAAATTG+TGG - chr8.1:6118061-6118080 MS.gene012254:intron 25.0%
!! GTTTAGTGATGAAAGATTTT+GGG + chr8.1:6117363-6117382 None:intergenic 25.0%
!! TATGTTTCCATTTCCATTTT+GGG + chr8.1:6118647-6118666 None:intergenic 25.0%
!! TTATGTTTCCATTTCCATTT+TGG + chr8.1:6118648-6118667 None:intergenic 25.0%
!! TTTAGTGATGAAAGATTTTG+GGG + chr8.1:6117362-6117381 None:intergenic 25.0%
!!! AAAGATGTTGTTTCTTTATC+AGG - chr8.1:6115825-6115844 MS.gene012254:intron 25.0%
!!! CACATTTATTTGATTTGGTT+TGG + chr8.1:6116242-6116261 None:intergenic 25.0%
!!! TATGTATGGTTTTATGCATT+CGG + chr8.1:6117114-6117133 None:intergenic 25.0%
!!! TATTTTAAGAACTTGCTCAA+TGG - chr8.1:6118712-6118731 MS.gene012254:intron 25.0%
!!! TTATCCTCTAAAATTTCAAG+TGG - chr8.1:6116491-6116510 MS.gene012254:intron 25.0%
!!! TTGTACAATTTTAATGGAAC+AGG - chr8.1:6118565-6118584 MS.gene012254:CDS 25.0%
!!! TTTTAACTTGTCTATGTTGT+TGG + chr8.1:6116419-6116438 None:intergenic 25.0%
AAAATATCACATATGTCGGT+GGG + chr8.1:6117469-6117488 None:intergenic 30.0%
AAACCGTAAAAAACTGCATT+TGG + chr8.1:6116753-6116772 None:intergenic 30.0%
AATCTTCATCTCTTTGATTG+TGG + chr8.1:6115983-6116002 None:intergenic 30.0%
ACAATCAGAAAACATACATG+AGG - chr8.1:6115383-6115402 MS.gene012254:intron 30.0%
ACTTCATTTGATTGCTCAAT+TGG - chr8.1:6115069-6115088 MS.gene012254:CDS 30.0%
ATATCATGCTCTTAAGTACA+TGG + chr8.1:6118187-6118206 None:intergenic 30.0%
CATACAAGAGATCTTACATT+TGG + chr8.1:6116962-6116981 None:intergenic 30.0%
CATTAGAAGAAAACAGGATT+TGG + chr8.1:6118759-6118778 None:intergenic 30.0%
CATTGAGTTTCTATGAGTAT+TGG - chr8.1:6116593-6116612 MS.gene012254:intron 30.0%
CTAAAGCCCTTAAAAATTGT+TGG + chr8.1:6115946-6115965 None:intergenic 30.0%
CTTTGATTGTGTCATATGTA+TGG + chr8.1:6117128-6117147 None:intergenic 30.0%
GAATTAGTTAACATACACAC+GGG + chr8.1:6118469-6118488 None:intergenic 30.0%
GGAATATAAGTCCAAAAACA+GGG - chr8.1:6118872-6118891 MS.gene012254:intron 30.0%
GGATCAATATTATTAGATGG+TGG - chr8.1:6115165-6115184 MS.gene012254:CDS 30.0%
GTAAAAAACTGCATTTGGTT+CGG + chr8.1:6116748-6116767 None:intergenic 30.0%
GTATAAATTAAGGGTTGTCT+AGG - chr8.1:6117915-6117934 MS.gene012254:CDS 30.0%
GTCAAATCTATGATCAAGAT+GGG - chr8.1:6118850-6118869 MS.gene012254:intron 30.0%
TAAAATATCACATATGTCGG+TGG + chr8.1:6117470-6117489 None:intergenic 30.0%
TAGACACAATAATCGATGAA+GGG - chr8.1:6116101-6116120 MS.gene012254:intron 30.0%
TCAAATCTATGATCAAGATG+GGG - chr8.1:6118851-6118870 MS.gene012254:intron 30.0%
TCGACTCTCATAGTAAAAAT+AGG + chr8.1:6117864-6117883 None:intergenic 30.0%
TGACAAAGTCTTCATAGAAA+AGG + chr8.1:6118834-6118853 None:intergenic 30.0%
TGTCAAATCTATGATCAAGA+TGG - chr8.1:6118849-6118868 MS.gene012254:intron 30.0%
TTAGACACAATAATCGATGA+AGG - chr8.1:6116100-6116119 MS.gene012254:intron 30.0%
TTTAATGGTTCAAATGGAGA+AGG + chr8.1:6115765-6115784 None:intergenic 30.0%
! AAACCAGCCAACAATTTTTA+AGG - chr8.1:6115936-6115955 MS.gene012254:intron 30.0%
! AACCAGCCAACAATTTTTAA+GGG - chr8.1:6115937-6115956 MS.gene012254:intron 30.0%
! AATCCTGTTTTCTTCTAATG+AGG - chr8.1:6118759-6118778 MS.gene012254:intron 30.0%
! ATGTTTCCATTTCCATTTTG+GGG + chr8.1:6118646-6118665 None:intergenic 30.0%
! CAATTATTGTCCCCTATTTT+AGG + chr8.1:6115900-6115919 None:intergenic 30.0%
! TCAATATTATTAGATGGTGG+TGG - chr8.1:6115168-6115187 MS.gene012254:CDS 30.0%
!! AAATAATATGCGGTTTGGTT+TGG - chr8.1:6116187-6116206 MS.gene012254:intron 30.0%
!! CAATTCATGTTTTGAATCGA+CGG + chr8.1:6117027-6117046 None:intergenic 30.0%
!! TATGCCACTTGAAATTTTAG+AGG + chr8.1:6116498-6116517 None:intergenic 30.0%
!!! ATTGCTAATTTTGATTTCGG+TGG - chr8.1:6117754-6117773 MS.gene012254:intron 30.0%
!!! GAACCAAATGCAGTTTTTTA+CGG - chr8.1:6116747-6116766 MS.gene012254:intron 30.0%
!!! GTTTTTCTATTGGATTGGTT+CGG - chr8.1:6116782-6116801 MS.gene012254:intron 30.0%
!!! TTTTTTACGGTTTCGTTTTG+CGG - chr8.1:6116760-6116779 MS.gene012254:intron 30.0%
AAAATAGGAAACATAAGCGG+CGG - chr8.1:6118331-6118350 MS.gene012254:intron 35.0%
ACACGGGAGCAATTAAATTA+AGG + chr8.1:6118453-6118472 None:intergenic 35.0%
ACATAACTGCTGTTCTTGAT+AGG - chr8.1:6118662-6118681 MS.gene012254:intron 35.0%
ACCACAAGTCAATGAATACT+AGG + chr8.1:6116819-6116838 None:intergenic 35.0%
ACCATGTGTAAAGATATGAG+TGG + chr8.1:6118303-6118322 None:intergenic 35.0%
ACCCTTAATTTATACAGTCC+AGG + chr8.1:6117910-6117929 None:intergenic 35.0%
AGACACAATAATCGATGAAG+GGG - chr8.1:6116102-6116121 MS.gene012254:intron 35.0%
ATCATATCTCATGGTGATTG+AGG - chr8.1:6117211-6117230 MS.gene012254:intron 35.0%
ATGACCCTTTATATGACGTT+TGG - chr8.1:6115655-6115674 MS.gene012254:intron 35.0%
ATTTCTCTTGTGTTGCGATT+TGG - chr8.1:6116641-6116660 MS.gene012254:intron 35.0%
CACAAGTCAATGAATACTAG+GGG + chr8.1:6116817-6116836 None:intergenic 35.0%
CACAATCAAAGCATGCAAAT+AGG - chr8.1:6117137-6117156 MS.gene012254:intron 35.0%
CACGGGAGCAATTAAATTAA+GGG + chr8.1:6118452-6118471 None:intergenic 35.0%
CCACAAGTCAATGAATACTA+GGG + chr8.1:6116818-6116837 None:intergenic 35.0%
CCCTGGACTGTATAAATTAA+GGG - chr8.1:6117906-6117925 MS.gene012254:CDS 35.0%
CCCTTAATTTATACAGTCCA+GGG + chr8.1:6117909-6117928 None:intergenic 35.0%
CCTAATATCAACTCTGTTAG+AGG - chr8.1:6115213-6115232 MS.gene012254:intron 35.0%
CGAGACTAAATCATATCTCA+TGG - chr8.1:6117202-6117221 MS.gene012254:intron 35.0%
GGGAATATAAGTCCAAAAAC+AGG - chr8.1:6118871-6118890 MS.gene012254:intron 35.0%
GTGGATGTCAAATGAAAACT+TGG + chr8.1:6118284-6118303 None:intergenic 35.0%
GTTGTCAAATGACTGTATCA+GGG - chr8.1:6117530-6117549 MS.gene012254:intron 35.0%
TATTTGCACTCCCTAAAGAA+CGG + chr8.1:6117556-6117575 None:intergenic 35.0%
TCCACTCATATCTTTACACA+TGG - chr8.1:6118299-6118318 MS.gene012254:intron 35.0%
TCTGCCAAACGTCATATAAA+GGG + chr8.1:6115662-6115681 None:intergenic 35.0%
TGATAAAATCAAAACGGCAG+TGG - chr8.1:6115248-6115267 MS.gene012254:intron 35.0%
TTTGATTATCAGGGTTGTGA+TGG - chr8.1:6115144-6115163 MS.gene012254:CDS 35.0%
! AAGAACTTGCTCAATGGAAA+GGG - chr8.1:6118718-6118737 MS.gene012254:intron 35.0%
! CAAATAAATGTGGTTTGGGT+TGG - chr8.1:6116250-6116269 MS.gene012254:intron 35.0%
! TAAGAACTTGCTCAATGGAA+AGG - chr8.1:6118717-6118736 MS.gene012254:intron 35.0%
! TCGTTTTGCGGTTTTTCTAT+TGG - chr8.1:6116772-6116791 MS.gene012254:intron 35.0%
! TTGCGGTTTTTCTATTGGAT+TGG - chr8.1:6116777-6116796 MS.gene012254:intron 35.0%
!! ATGTTTTGAATCGACGGAAA+AGG + chr8.1:6117021-6117040 None:intergenic 35.0%
!! CCTCTAACAGAGTTGATATT+AGG + chr8.1:6115216-6115235 None:intergenic 35.0%
!! GTTTCTATGAGTATTGGTCT+AGG - chr8.1:6116599-6116618 MS.gene012254:intron 35.0%
!!! TTCTTTTTTGAGTAGGGGTA+GGG + chr8.1:6117641-6117660 None:intergenic 35.0%
!!! TTTCTTTTTTGAGTAGGGGT+AGG + chr8.1:6117642-6117661 None:intergenic 35.0%
ACTAGAACTTCTCGTGTCTT+AGG - chr8.1:6116846-6116865 MS.gene012254:intron 40.0%
AGAGATGGAACAGTCTCAAA+TGG - chr8.1:6115717-6115736 MS.gene012254:intron 40.0%
AGCCCTTAAAAATTGTTGGC+TGG + chr8.1:6115942-6115961 None:intergenic 40.0%
ATGGATCTCTAGCAAATTCG+AGG - chr8.1:6115736-6115755 MS.gene012254:intron 40.0%
CAAAATCTGTGTCCCCAAAA+TGG - chr8.1:6118631-6118650 MS.gene012254:intron 40.0%
CCTAGCAAAACATTCCATGA+AGG + chr8.1:6115693-6115712 None:intergenic 40.0%
GCCCTGGACTGTATAAATTA+AGG - chr8.1:6117905-6117924 MS.gene012254:CDS 40.0%
GGTTGTCAAATGACTGTATC+AGG - chr8.1:6117529-6117548 MS.gene012254:intron 40.0%
GTCTGCCAAACGTCATATAA+AGG + chr8.1:6115663-6115682 None:intergenic 40.0%
TACAAGGTGAACAGAATCTC+TGG + chr8.1:6115325-6115344 None:intergenic 40.0%
TGGCCTCATTAGAAGAAAAC+AGG + chr8.1:6118765-6118784 None:intergenic 40.0%
TTATATGACGTTTGGCAGAC+TGG - chr8.1:6115663-6115682 MS.gene012254:intron 40.0%
! CCTTCATGGAATGTTTTGCT+AGG - chr8.1:6115690-6115709 MS.gene012254:intron 40.0%
!! ATATGCGGTTTGGTTTGGTT+TGG - chr8.1:6116192-6116211 MS.gene012254:intron 40.0%
!! CCCTAGTATTCATTGACTTG+TGG - chr8.1:6116815-6116834 MS.gene012254:intron 40.0%
!! TCTTGTGTTGCGATTTGGTT+TGG - chr8.1:6116646-6116665 MS.gene012254:intron 40.0%
!! TGTTGCGATTTGGTTTGGTT+TGG - chr8.1:6116651-6116670 MS.gene012254:intron 40.0%
AACAGAATCTCTGGCAGCTA+TGG + chr8.1:6115316-6115335 None:intergenic 45.0%
ACCAACCAATCCAAACCATG+CGG - chr8.1:6116695-6116714 MS.gene012254:intron 45.0%
AGGTGCTCATACGTTTGGAA+GGG - chr8.1:6118516-6118535 MS.gene012254:CDS 45.0%
AGTCCAAAAACAGGGTCTGT+TGG - chr8.1:6118880-6118899 MS.gene012254:intron 45.0%
CTGTGTCCCCAAAATGGAAA+TGG - chr8.1:6118637-6118656 MS.gene012254:intron 45.0%
GCAAATAGCTCAACCGAACT+GGG - chr8.1:6117569-6117588 MS.gene012254:intron 45.0%
TCGAATTCGGCTACATTCGT+AGG - chr8.1:6118023-6118042 MS.gene012254:CDS 45.0%
TGCAAATAGCTCAACCGAAC+TGG - chr8.1:6117568-6117587 MS.gene012254:intron 45.0%
TGTATCAGGGCCGTTCTTTA+GGG - chr8.1:6117543-6117562 MS.gene012254:intron 45.0%
TTAGCCTCTAGTGTACTGTC+TGG + chr8.1:6118595-6118614 None:intergenic 45.0%
TTCACCAGACAGTACACTAG+AGG - chr8.1:6118588-6118607 MS.gene012254:intron 45.0%
! AAGGTGCTCATACGTTTGGA+AGG - chr8.1:6118515-6118534 MS.gene012254:CDS 45.0%
! ACAGGATTTGGTCAGAGCTA+AGG + chr8.1:6118747-6118766 None:intergenic 45.0%
! CATTTTCTTGCTCAACCGCA+TGG + chr8.1:6116713-6116732 None:intergenic 45.0%
! CGGCGGCACAAAATTTTCTA+GGG - chr8.1:6118348-6118367 MS.gene012254:intron 45.0%
! GTTTTGCTAGGACGAAGAGA+TGG - chr8.1:6115702-6115721 MS.gene012254:intron 45.0%
! TGTCCAACAGACCCTGTTTT+TGG + chr8.1:6118886-6118905 None:intergenic 45.0%
! TTTGGGGACACAGATTTTGC+AGG + chr8.1:6118630-6118649 None:intergenic 45.0%
!! GCGATTTGGTTTGGTTTGGT+TGG - chr8.1:6116655-6116674 MS.gene012254:intron 45.0%
!! TGTGAAGGTGCTCATACGTT+TGG - chr8.1:6118511-6118530 MS.gene012254:CDS 45.0%
!! TTCTTGAGGCCTGTCACTTT+AGG + chr8.1:6117598-6117617 None:intergenic 45.0%
!! TTGGGTTGGATCAGTTGATG+CGG - chr8.1:6116264-6116283 MS.gene012254:intron 45.0%
!! AACAAAATATATATAATTAA+GGG + chr8.1:6115566-6115585 None:intergenic 5.0%
!! AATTTAAATAAATATTTACA+TGG - chr8.1:6115093-6115112 MS.gene012254:CDS 5.0%
!! TAAAAAAAAAAAAGATTATT+GGG + chr8.1:6117061-6117080 None:intergenic 5.0%
!! TAACAAAATATATATAATTA+AGG + chr8.1:6115567-6115586 None:intergenic 5.0%
!! TGAAATTTAAAAAATTTATA+CGG - chr8.1:6118409-6118428 MS.gene012254:CDS 5.0%
!!! AATAATAAATTTCATATTTT+TGG - chr8.1:6115850-6115869 MS.gene012254:intron 5.0%
!!! TTTTTATAAATAAAAAAATG+GGG - chr8.1:6114880-6114899 MS.gene012254:CDS 5.0%
AGCCTTCAGTTTCACAGGGA+CGG - chr8.1:6117883-6117902 MS.gene012254:intron 50.0%
AGTCGAGCCTTCAGTTTCAC+AGG - chr8.1:6117878-6117897 MS.gene012254:intron 50.0%
CTGTATCAGGGCCGTTCTTT+AGG - chr8.1:6117542-6117561 MS.gene012254:intron 50.0%
GTCGAGCCTTCAGTTTCACA+GGG - chr8.1:6117879-6117898 MS.gene012254:intron 50.0%
TATGACGTTTGGCAGACTGG+TGG - chr8.1:6115666-6115685 MS.gene012254:intron 50.0%
TCTTGCTCAACCGCATGGTT+TGG + chr8.1:6116708-6116727 None:intergenic 50.0%
! CTCAACCGCATGGTTTGGAT+TGG + chr8.1:6116703-6116722 None:intergenic 50.0%
! GCGGCGGCACAAAATTTTCT+AGG - chr8.1:6118347-6118366 MS.gene012254:intron 50.0%
! GGGACACAGATTTTGCAGGT+CGG + chr8.1:6118626-6118645 None:intergenic 50.0%
! TCACTTTAGGAGGCCCAGTT+CGG + chr8.1:6117585-6117604 None:intergenic 50.0%
!! AATCGATGAAGGGGTGTTCG+CGG - chr8.1:6116111-6116130 MS.gene012254:intron 50.0%
!! ACCGCATGGTTTGGATTGGT+TGG + chr8.1:6116699-6116718 None:intergenic 50.0%
!! TTGAGGCCTGTCACTTTAGG+AGG + chr8.1:6117595-6117614 None:intergenic 50.0%
ACTGGGCCTCCTAAAGTGAC+AGG - chr8.1:6117586-6117605 MS.gene012254:intron 55.0%
CAGGGTCTGTTGGACAGATC+AGG - chr8.1:6118890-6118909 MS.gene012254:intron 55.0%
!! GTGCGGTTTGGTTCGGCTTT+GGG - chr8.1:6116133-6116152 MS.gene012254:intron 55.0%
!! TGCGGTTTGGTTCGGCTTTG+GGG - chr8.1:6116134-6116153 MS.gene012254:intron 55.0%
GGCAGACTGGTGGTCCTTCA+TGG - chr8.1:6115676-6115695 MS.gene012254:intron 60.0%
GGCCGTCCCTGTGAAACTGA+AGG + chr8.1:6117888-6117907 None:intergenic 60.0%
! GCAGTGGAGAGTGCGTGCAA+TGG - chr8.1:6115264-6115283 MS.gene012254:intron 60.0%
!! ATGAAGGGGTGTTCGCGGTG+CGG - chr8.1:6116116-6116135 MS.gene012254:intron 60.0%
!! GCGGTTTGGTTCGGCTTTGG+GGG - chr8.1:6116135-6116154 MS.gene012254:intron 60.0%
!! GGTGCGGTTTGGTTCGGCTT+TGG - chr8.1:6116132-6116151 MS.gene012254:intron 60.0%
!! GTTCGCGGTGCGGTTTGGTT+CGG - chr8.1:6116126-6116145 MS.gene012254:intron 60.0%
CAGTTTCACAGGGACGGCCC+TGG - chr8.1:6117889-6117908 MS.gene012254:intron 65.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr8.1:6116121-6116140 MS.gene012254:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 6114807 6118939 6114807 ID=MS.gene012254
chr8.1 mRNA 6114807 6118939 6114807 ID=MS.gene012254.t1;Parent=MS.gene012254
chr8.1 exon 6118892 6118939 6118892 ID=MS.gene012254.t1.exon1;Parent=MS.gene012254.t1
chr8.1 CDS 6118892 6118939 6118892 ID=cds.MS.gene012254.t1;Parent=MS.gene012254.t1
chr8.1 exon 6118405 6118590 6118405 ID=MS.gene012254.t1.exon2;Parent=MS.gene012254.t1
chr8.1 CDS 6118405 6118590 6118405 ID=cds.MS.gene012254.t1;Parent=MS.gene012254.t1
chr8.1 exon 6117900 6118065 6117900 ID=MS.gene012254.t1.exon3;Parent=MS.gene012254.t1
chr8.1 CDS 6117900 6118065 6117900 ID=cds.MS.gene012254.t1;Parent=MS.gene012254.t1
chr8.1 exon 6114807 6115228 6114807 ID=MS.gene012254.t1.exon4;Parent=MS.gene012254.t1
chr8.1 CDS 6114807 6115228 6114807 ID=cds.MS.gene012254.t1;Parent=MS.gene012254.t1
Gene Sequence

>MS.gene012254

ATGGCTGCTTCTTTGCTTCGTCTTCACTTTCATGATTGCTTTGTCAATGTAAGTTTAGTTGAGATACATATATTTTTTATAAATAAAAAAATGGGGAAGAAGAAAATTATTATTTATTAATAAATGACGTGAATAATCATTTTAAAATTGGGATTTGAGTTCCGTTGCTTAAGATATATATTGCATATTTATTTAATTTATATGCATGCATAATATATTGTATTCCTTTAAAAAAAATGCATGCATAATATAATGCATATATACTTCATTTGATTGCTCAATTGGTAATTTAAATAAATATTTACATGGTACTACACATTCACTTTCAAATTGTTAATTTGATTATCAGGGTTGTGATGGATCAATATTATTAGATGGTGGTGGTGCTAGTGAAAAGTCTGCATTTCCTAATATCAACTCTGTTAGAGGATTTGAAGTTATTGATAAAATCAAAACGGCAGTGGAGAGTGCGTGCAATGGTGTTGTCTCATGTGCTGATATTTTAACCATAGCTGCCAGAGATTCTGTTCACCTTGTAATTACTTTCTTGATTTATTGATTTTACTTACTTTGTTTACAATCAGAAAACATACATGAGGTCAATCCAAAAAAATAAAAAACATGCATAGGAACTAAGTATGAAATATATTTCATTTAACTTAAAGGATATTATAACTTTCTTTTATACCTTTTTTTCTTCTTTTTGAAATGACTACTTTGTGTATGAAATATAATTTCATTGACGATAATATATGACCCTTAATTATATATATTTTGTTACAGTATGACTCGTAATAATATATGTTGTCGAAATATGAAACTTATATAACTTCCCAAAAAAAAAATATATGACCCTTTATATGACGTTTGGCAGACTGGTGGTCCTTCATGGAATGTTTTGCTAGGACGAAGAGATGGAACAGTCTCAAATGGATCTCTAGCAAATTCGAGGCTTCCTTCTCCATTTGAACCATTAAATTCTATCGTTTCAAAGTTTAATGATGTAGGGCTCGATCTTAAAGATGTTGTTTCTTTATCAGGTAAATAATAAATTTCATATTTTTGGAGATTAATAGTGATATACTATATGCCTAAAATAGGGGACAATAATTGAATCACAATATATTTCAAACCAGCCAACAATTTTTAAGGGCTTTAGACATGTTACAAACTCCACAATCAAAGAGATGAAGATTTTATCTTAGAAAAAATATATTGGAATTAATTCAATAATTATCACACACACACACATAATGCTCAATACAAAGATTATAAACAATAATAATACATAGATTAGACACAATAATCGATGAAGGGGTGTTCGCGGTGCGGTTTGGTTCGGCTTTGGGGGTAAAAGTCATCTGAACCGCAAGATAAAAAAAATAATATGCGGTTTGGTTTGGTTTGGTTGACTTTAAAAATAAAGTCTGAACCAAACCAAATCAAATAAATGTGGTTTGGGTTGGATCAGTTGATGCGGTTTTTTTAGACGATACATTTTTTTGTTTCCAACATTAAAATCAATTTAAAAAGTTGAAACACAACATATTTTCAGCAATGTTTTAAATTTCATCAAATATTACAATTTCATTTTCATTTTACAATGTTTCCAACAACATAGACAAGTTAAAAACATGGACAAACATAATCCTATTTTGTAAGAATGCTAAAGCCTAAAATTTTATTATCCTCTAAAATTTCAAGTGGCATATAAATACGCTTTTTTAAATAAAAAACATAGATGAAATCTAACAAAAGAAAAAATAAGTCATTTTATAAAGGTTTTCATTGAGTTTCTATGAGTATTGGTCTAGGTGAAATATATTTAATTAACATTTCTCTTGTGTTGCGATTTGGTTTGGTTTGGTTGGTAAAATGAAAACTGCAAACCAACCAATCCAAACCATGCGGTTGAGCAAGAAAATGATCTGATTACATCCGAACCAAATGCAGTTTTTTACGGTTTCGTTTTGCGGTTTTTCTATTGGATTGGTTCGGTTTTGAACACCCCTAGTATTCATTGACTTGTGGTTCTTTCAACTAGAACTTCTCGTGTCTTAGGCTCTCTTCATATGTTTTACAATCATTTCTTGAGTTAAGATACCTAATATATAGACATAAAAATGATCAAGATTTAACATATTAATGATCTCCAAATGTAAGATCTCTTGTATGTGAGCATCTATTTTGTTTCAATCAACTTTATGGTTGCCTTTTCCGTCGATTCAAAACATGAATTGTTCAAGCATCTCCCAATAATCTTTTTTTTTTTTAGGAAAACTAATCTTATCATGCATGTTGTTTCCGAATGCATAAAACCATACATATGACACAATCAAAGCATGCAAATAGGAAAATACTTAATTTTCTAAATTTTCAATATTTTAGCAAAAATCGAGACTAAATCATATCTCATGGTGATTGAGGTATTCTCTAGTTTATTAACTTTATTGTTGAATTTTCTTATAACTTTATTAATATAACTCTTTGTGATAATTAACAAATATGTCTATCGTCGTTAAGTACGTTGATGTCTATTACAAGAAAGACGTCCCCAAAATCTTTCATCACTAAACTTTAATTTTGTTAATGATTTATCATTGTTAACTAAATTATATAAAATAAAATCAACAACTTATACGAGGAATATAAATTTATTCCCACCGACATATGTGATATTTTATTCTTTTTGTTGGATGAGTCACATAAAATAGAGATATGGGGTTGTCAAATGACTGTATCAGGGCCGTTCTTTAGGGAGTGCAAATAGCTCAACCGAACTGGGCCTCCTAAAGTGACAGGCCTCAAGAAAAAAAATTATAGCTCGATATCCCTACCCCTACTCAAAAAAGAAAAATAAACATGTTTCATGTTTCAATTTCTAAGTAAAAAAATCATGTTTCATGTTTCTATTTCTAAGTTAAAAAACACGTCTTTAGTAAAAATAATTGCTAATTTTGATTTCGGTGGCTAATAATCATTATACGAGTGTTGTTTTCAATTTAAATAGAAGATTAATTTTTTTTAAAAATTGTGCATTTTTTTTATTAGGGACCTATTTTTACTATGAGAGTCGAGCCTTCAGTTTCACAGGGACGGCCCTGGACTGTATAAATTAAGGGTTGTCTAGGTATCATGACTCTTCTCCATAATAGTCATTTAAAATTATATTTTTTACACTTATTATTATAATTATAAGCAAGATGTAATATACTTTCGAATTCGGCTACATTCGTAGGTATATAGTGTGCCTTATCAAAGTGTCTAAAAATTGTGGTTGAGTCGATTGAAACAACGTGTTGCTGAAGTAATTACAAACTTGTGATGATCATTATAAAGTAATTTATCATGTGGATAATAGGATCAACTTCAATTAACCATGTACTTAAGAGCATGATATAGAGAGAAAAAAAATTTAAAATTCGTATAAAAATGATGAACTAAATACTGCCAACAAACTTCAACATTTTCTAACCAAGTTTTCATTTGACATCCACTCATATCTTTACACATGGTTTGATTTTAAAATAGGAAACATAAGCGGCGGCACAAAATTTTCTAGGGACCAAAAATTGATGAAAATTTTTATAGGGACTAAAACCTGAAATTTAAAAAATTTATACGGATCGAAAACATATTTAGCCCTTAATTTAATTGCTCCCGTGTGTATGTTAACTAATTCAATATTGTTATTGTTATATATTTGTGAAGGTGCTCATACGTTTGGAAGGGCAAAGTGTGCATTGTTCAGCAATAGATTGTACAATTTTAATGGAACAGGTTCACCAGACAGTACACTAGAGGCTAACATGCTCGCCGACCTGCAAAATCTGTGTCCCCAAAATGGAAATGGAAACATAACTGCTGTTCTTGATAGGCACTCACCTGATATATTTGACAATCACTATTTTAAGAACTTGCTCAATGGAAAGGGTCTCCTTAGCTCTGACCAAATCCTGTTTTCTTCTAATGAGGCCACTTTAACTACTAAACCTTTAGTCCAGAGCTATAGCAATAATATTTTCCTTTTCTATGAAGACTTTGTCAAATCTATGATCAAGATGGGGAATATAAGTCCAAAAACAGGGTCTGTTGGACAGATCAGGAAGAACTGCAGAGTGATAAATCCATAG
Protein sequence

>MS.gene012254.t1

MAASLLRLHFHDCFVNGCDGSILLDGGGASEKSAFPNINSVRGFEVIDKIKTAVESACNGVVSCADILTIAARDSVHLTGGPSWNVLLGRRDGTVSNGSLANSRLPSPFEPLNSIVSKFNDVGLDLKDVVSLSGAHTFGRAKCALFSNRLYNFNGTGSPDSTLEANMLADLQNLCPQNGNGNITAVLDRHSPDIFDNHYFKNLLNGKGLLSSDQILFSSNEATLTTKPLVQSYSNNIFLFYEDFVKSMIKMGNISPKTGSVGQIRKNCRVINP