Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005651.t1 | XP_013469229.1 | 95.5 | 312 | 7 | 2 | 1 | 305 | 1 | 312 | 4.80E-159 | 570.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005651.t1 | B0G143 | 39.8 | 284 | 167 | 4 | 26 | 305 | 11 | 294 | 2.2e-51 | 204.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005651.t1 | A0A072VN54 | 95.5 | 312 | 7 | 2 | 1 | 305 | 1 | 312 | 3.4e-159 | 570.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005651 | MS.gene53384 | PPI |
| MS.gene005651 | MS.gene09068 | PPI |
| MS.gene005651 | MS.gene001110 | PPI |
| MS.gene005651 | MS.gene038868 | PPI |
| MS.gene005651 | MS.gene023557 | PPI |
| MS.gene005651 | MS.gene21596 | PPI |
| MS.gene005718 | MS.gene005651 | PPI |
| MS.gene005651 | MS.gene84655 | PPI |
| MS.gene037607 | MS.gene005651 | PPI |
| MS.gene005651 | MS.gene64395 | PPI |
| MS.gene005651 | MS.gene21371 | PPI |
| MS.gene005651 | MS.gene010661 | PPI |
| MS.gene005651 | MS.gene73296 | PPI |
| MS.gene005651 | MS.gene83326 | PPI |
| MS.gene005651 | MS.gene99446 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005651.t1 | MTR_1g088995 | 95.513 | 312 | 7 | 2 | 1 | 305 | 1 | 312 | 0.0 | 598 |
| MS.gene005651.t1 | MTR_1g088995 | 89.030 | 237 | 19 | 2 | 1 | 230 | 1 | 237 | 3.33e-141 | 398 |
| MS.gene005651.t1 | MTR_1g090330 | 34.146 | 287 | 178 | 4 | 29 | 305 | 17 | 302 | 1.78e-54 | 179 |
| MS.gene005651.t1 | MTR_1g090330 | 27.551 | 196 | 130 | 4 | 17 | 201 | 102 | 296 | 6.32e-15 | 74.3 |
| MS.gene005651.t1 | MTR_7g066690 | 36.877 | 301 | 162 | 6 | 16 | 298 | 7 | 297 | 1.29e-52 | 175 |
| MS.gene005651.t1 | MTR_7g066690 | 27.778 | 180 | 120 | 4 | 34 | 207 | 129 | 304 | 3.68e-13 | 68.9 |
| MS.gene005651.t1 | MTR_4g018750 | 34.426 | 305 | 175 | 5 | 10 | 300 | 4 | 297 | 2.79e-51 | 171 |
| MS.gene005651.t1 | MTR_3g100570 | 33.553 | 304 | 172 | 4 | 26 | 299 | 6 | 309 | 1.59e-50 | 169 |
| MS.gene005651.t1 | MTR_3g462140 | 34.915 | 295 | 169 | 7 | 21 | 299 | 10 | 297 | 6.51e-44 | 152 |
| MS.gene005651.t1 | MTR_5g032420 | 30.671 | 313 | 178 | 6 | 26 | 299 | 6 | 318 | 3.56e-42 | 148 |
| MS.gene005651.t1 | MTR_4g018750 | 33.210 | 271 | 156 | 5 | 10 | 266 | 4 | 263 | 6.34e-41 | 144 |
| MS.gene005651.t1 | MTR_8g068890 | 31.046 | 306 | 179 | 5 | 26 | 299 | 6 | 311 | 1.19e-38 | 139 |
| MS.gene005651.t1 | MTR_8g086070 | 28.920 | 287 | 179 | 8 | 26 | 299 | 21 | 295 | 1.15e-29 | 114 |
| MS.gene005651.t1 | MTR_4g057850 | 29.348 | 276 | 162 | 8 | 41 | 296 | 37 | 299 | 3.69e-23 | 97.4 |
| MS.gene005651.t1 | MTR_1g097890 | 29.630 | 270 | 162 | 8 | 33 | 299 | 59 | 303 | 9.69e-21 | 90.9 |
| MS.gene005651.t1 | MTR_1g097890 | 29.570 | 186 | 115 | 5 | 25 | 204 | 131 | 306 | 5.31e-12 | 65.9 |
| MS.gene005651.t1 | MTR_8g076760 | 27.046 | 281 | 184 | 8 | 41 | 302 | 29 | 307 | 1.10e-20 | 90.5 |
| MS.gene005651.t1 | MTR_7g109135 | 31.229 | 301 | 180 | 12 | 17 | 299 | 14 | 305 | 4.03e-20 | 89.0 |
| MS.gene005651.t1 | MTR_2g436930 | 24.671 | 304 | 186 | 8 | 30 | 294 | 19 | 318 | 2.20e-19 | 87.0 |
| MS.gene005651.t1 | MTR_2g436930 | 27.933 | 179 | 103 | 5 | 117 | 274 | 10 | 183 | 2.54e-11 | 63.9 |
| MS.gene005651.t1 | MTR_8g092080 | 28.405 | 257 | 157 | 7 | 21 | 274 | 47 | 279 | 1.38e-18 | 84.7 |
| MS.gene005651.t1 | MTR_8g086070 | 29.680 | 219 | 123 | 8 | 9 | 210 | 2 | 206 | 1.43e-17 | 80.1 |
| MS.gene005651.t1 | MTR_4g119770 | 25.000 | 308 | 186 | 9 | 30 | 296 | 18 | 321 | 1.59e-17 | 82.0 |
| MS.gene005651.t1 | MTR_1g095780 | 26.897 | 290 | 155 | 10 | 30 | 298 | 529 | 782 | 2.10e-17 | 83.2 |
| MS.gene005651.t1 | MTR_5g030530 | 27.208 | 283 | 180 | 8 | 39 | 301 | 21 | 297 | 5.07e-17 | 80.1 |
| MS.gene005651.t1 | MTR_4g114320 | 29.670 | 182 | 117 | 4 | 27 | 204 | 222 | 396 | 7.74e-17 | 80.5 |
| MS.gene005651.t1 | MTR_4g114320 | 24.815 | 270 | 192 | 5 | 34 | 299 | 131 | 393 | 2.37e-13 | 70.5 |
| MS.gene005651.t1 | MTR_4g114320 | 28.571 | 182 | 122 | 3 | 119 | 298 | 120 | 295 | 5.71e-12 | 66.2 |
| MS.gene005651.t1 | MTR_8g096050 | 26.298 | 289 | 194 | 8 | 25 | 303 | 226 | 505 | 8.74e-17 | 80.9 |
| MS.gene005651.t1 | MTR_7g084400 | 26.705 | 176 | 123 | 3 | 30 | 202 | 313 | 485 | 9.55e-17 | 80.9 |
| MS.gene005651.t1 | MTR_7g084400 | 25.773 | 291 | 194 | 8 | 23 | 303 | 210 | 488 | 7.19e-14 | 72.0 |
| MS.gene005651.t1 | MTR_7g109135 | 29.966 | 297 | 182 | 12 | 17 | 299 | 14 | 298 | 1.05e-16 | 79.3 |
| MS.gene005651.t1 | MTR_5g055410 | 28.889 | 270 | 176 | 8 | 42 | 298 | 37 | 303 | 1.38e-16 | 79.3 |
| MS.gene005651.t1 | MTR_3g107510 | 28.571 | 182 | 118 | 4 | 27 | 203 | 220 | 394 | 1.64e-16 | 79.7 |
| MS.gene005651.t1 | MTR_3g107510 | 25.830 | 271 | 188 | 7 | 34 | 299 | 130 | 392 | 1.09e-14 | 74.3 |
| MS.gene005651.t1 | MTR_3g025800 | 25.000 | 332 | 201 | 11 | 5 | 298 | 8 | 329 | 2.24e-16 | 79.0 |
| MS.gene005651.t1 | MTR_7g064980 | 24.561 | 285 | 200 | 6 | 30 | 299 | 29 | 313 | 2.93e-16 | 78.2 |
| MS.gene005651.t1 | MTR_7g064980 | 29.798 | 198 | 113 | 8 | 121 | 299 | 24 | 214 | 2.40e-13 | 69.7 |
| MS.gene005651.t1 | MTR_7g064980 | 25.701 | 214 | 127 | 8 | 12 | 207 | 120 | 319 | 1.83e-11 | 64.3 |
| MS.gene005651.t1 | MTR_1g012030 | 29.412 | 204 | 129 | 6 | 5 | 203 | 218 | 411 | 4.50e-16 | 78.6 |
| MS.gene005651.t1 | MTR_1g012030 | 25.556 | 270 | 190 | 6 | 34 | 299 | 147 | 409 | 1.21e-15 | 77.0 |
| MS.gene005651.t1 | MTR_1g012030 | 26.230 | 183 | 126 | 3 | 119 | 299 | 136 | 311 | 1.17e-12 | 68.2 |
| MS.gene005651.t1 | MTR_1g087840 | 29.779 | 272 | 173 | 8 | 42 | 299 | 35 | 302 | 4.84e-16 | 77.4 |
| MS.gene005651.t1 | MTR_3g098460 | 25.175 | 286 | 201 | 6 | 25 | 303 | 204 | 483 | 8.60e-16 | 77.8 |
| MS.gene005651.t1 | MTR_8g066975 | 26.690 | 281 | 184 | 7 | 39 | 301 | 21 | 297 | 1.76e-15 | 75.9 |
| MS.gene005651.t1 | MTR_2g102010 | 26.217 | 267 | 176 | 7 | 20 | 274 | 11 | 268 | 2.45e-15 | 75.5 |
| MS.gene005651.t1 | MTR_7g109135 | 31.304 | 230 | 145 | 7 | 80 | 299 | 1 | 227 | 5.69e-15 | 73.6 |
| MS.gene005651.t1 | MTR_8g027975 | 29.442 | 197 | 127 | 4 | 110 | 297 | 41 | 234 | 7.87e-15 | 74.3 |
| MS.gene005651.t1 | MTR_8g027975 | 27.225 | 191 | 116 | 4 | 35 | 202 | 163 | 353 | 1.30e-14 | 73.9 |
| MS.gene005651.t1 | MTR_7g109135 | 33.333 | 174 | 107 | 5 | 133 | 299 | 35 | 206 | 7.96e-15 | 72.4 |
| MS.gene005651.t1 | MTR_4g012850 | 27.037 | 270 | 173 | 8 | 25 | 281 | 15 | 273 | 2.65e-14 | 72.4 |
| MS.gene005651.t1 | MTR_4g012850 | 29.268 | 164 | 104 | 4 | 42 | 196 | 126 | 286 | 6.91e-12 | 65.5 |
| MS.gene005651.t1 | MTR_7g068340 | 24.074 | 270 | 184 | 6 | 38 | 299 | 99 | 355 | 2.68e-14 | 73.2 |
| MS.gene005651.t1 | MTR_4g094578 | 24.422 | 303 | 187 | 10 | 23 | 302 | 22 | 305 | 9.70e-14 | 70.9 |
| MS.gene005651.t1 | MTR_3g104600 | 22.910 | 323 | 219 | 8 | 4 | 302 | 15 | 331 | 1.13e-13 | 70.9 |
| MS.gene005651.t1 | MTR_5g009500 | 27.083 | 192 | 113 | 4 | 35 | 202 | 150 | 338 | 1.80e-13 | 70.5 |
| MS.gene005651.t1 | MTR_5g009500 | 28.108 | 185 | 123 | 3 | 122 | 297 | 38 | 221 | 4.69e-13 | 69.3 |
| MS.gene005651.t1 | MTR_5g009500 | 21.406 | 313 | 212 | 7 | 21 | 303 | 33 | 341 | 3.91e-11 | 63.5 |
| MS.gene005651.t1 | MTR_6g033280 | 25.431 | 232 | 143 | 7 | 24 | 234 | 57 | 279 | 1.87e-13 | 70.5 |
| MS.gene005651.t1 | MTR_5g073040 | 28.821 | 229 | 147 | 6 | 25 | 243 | 34 | 256 | 1.92e-13 | 70.1 |
| MS.gene005651.t1 | MTR_6g034515 | 24.911 | 281 | 174 | 10 | 41 | 298 | 82 | 348 | 5.89e-13 | 68.9 |
| MS.gene005651.t1 | MTR_6g091800 | 24.607 | 191 | 130 | 5 | 121 | 298 | 18 | 207 | 4.39e-12 | 65.5 |
| MS.gene005651.t1 | MTR_6g091800 | 23.413 | 252 | 162 | 7 | 16 | 242 | 2 | 247 | 9.44e-11 | 61.6 |
| MS.gene005651.t1 | MTR_6g091800 | 24.607 | 191 | 130 | 5 | 121 | 298 | 18 | 207 | 5.06e-12 | 65.5 |
| MS.gene005651.t1 | MTR_6g091800 | 23.413 | 252 | 162 | 7 | 16 | 242 | 2 | 247 | 4.95e-11 | 62.4 |
| MS.gene005651.t1 | MTR_6g091800 | 24.607 | 191 | 130 | 5 | 121 | 298 | 18 | 207 | 7.94e-12 | 65.1 |
| MS.gene005651.t1 | MTR_6g091800 | 23.715 | 253 | 162 | 7 | 16 | 243 | 2 | 248 | 2.70e-11 | 63.5 |
| MS.gene005651.t1 | MTR_7g015870 | 25.521 | 192 | 109 | 2 | 36 | 204 | 136 | 316 | 1.39e-11 | 64.7 |
| MS.gene005651.t1 | MTR_4g088545 | 22.295 | 305 | 209 | 6 | 20 | 303 | 6 | 303 | 1.55e-11 | 64.3 |
| MS.gene005651.t1 | MTR_4g119770 | 24.194 | 248 | 151 | 7 | 30 | 244 | 18 | 261 | 2.73e-11 | 63.2 |
| MS.gene005651.t1 | MTR_6g015860 | 25.521 | 192 | 109 | 2 | 36 | 204 | 128 | 308 | 3.22e-11 | 63.5 |
| MS.gene005651.t1 | MTR_8g099910 | 23.478 | 230 | 150 | 6 | 24 | 234 | 67 | 289 | 3.72e-11 | 63.5 |
| MS.gene005651.t1 | MTR_7g015870 | 25.397 | 189 | 107 | 2 | 36 | 201 | 132 | 309 | 6.65e-11 | 62.8 |
| MS.gene005651.t1 | MTR_6g091800 | 24.096 | 166 | 114 | 3 | 121 | 274 | 18 | 183 | 6.66e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005651.t1 | AT4G03115 | 69.307 | 303 | 88 | 2 | 3 | 305 | 17 | 314 | 2.72e-148 | 419 |
| MS.gene005651.t1 | AT4G03115 | 69.307 | 303 | 88 | 2 | 3 | 305 | 49 | 346 | 8.95e-148 | 419 |
| MS.gene005651.t1 | AT4G03115 | 72.047 | 254 | 68 | 1 | 52 | 305 | 1 | 251 | 2.45e-130 | 371 |
| MS.gene005651.t1 | AT4G03115 | 72.385 | 239 | 63 | 1 | 67 | 305 | 8 | 243 | 1.59e-123 | 353 |
| MS.gene005651.t1 | AT4G03115 | 69.444 | 216 | 61 | 2 | 3 | 218 | 17 | 227 | 2.97e-99 | 291 |
| MS.gene005651.t1 | AT4G03115 | 70.093 | 214 | 59 | 2 | 3 | 216 | 17 | 225 | 5.23e-99 | 290 |
| MS.gene005651.t1 | AT3G54110 | 34.266 | 286 | 170 | 5 | 26 | 298 | 15 | 295 | 3.74e-49 | 166 |
| MS.gene005651.t1 | AT5G58970 | 33.904 | 292 | 165 | 7 | 26 | 299 | 16 | 297 | 9.06e-46 | 157 |
| MS.gene005651.t1 | AT5G58970 | 28.090 | 178 | 122 | 3 | 31 | 204 | 125 | 300 | 1.36e-14 | 73.2 |
| MS.gene005651.t1 | AT1G14140 | 31.379 | 290 | 183 | 4 | 29 | 305 | 19 | 305 | 1.52e-44 | 154 |
| MS.gene005651.t1 | AT4G24570 | 30.476 | 315 | 167 | 6 | 26 | 299 | 6 | 309 | 6.15e-43 | 150 |
| MS.gene005651.t1 | AT5G09470 | 30.211 | 331 | 171 | 6 | 23 | 297 | 3 | 329 | 4.80e-38 | 137 |
| MS.gene005651.t1 | AT2G22500 | 29.967 | 307 | 177 | 7 | 26 | 299 | 6 | 307 | 1.95e-34 | 127 |
| MS.gene005651.t1 | AT5G58970 | 33.054 | 239 | 138 | 6 | 26 | 246 | 16 | 250 | 1.16e-32 | 122 |
| MS.gene005651.t1 | AT5G58970 | 27.500 | 160 | 104 | 3 | 127 | 274 | 21 | 180 | 5.73e-11 | 62.4 |
| MS.gene005651.t1 | AT5G19760 | 28.136 | 295 | 181 | 8 | 21 | 299 | 13 | 292 | 9.41e-30 | 115 |
| MS.gene005651.t1 | AT5G01340 | 31.379 | 290 | 168 | 9 | 27 | 296 | 17 | 295 | 3.84e-25 | 102 |
| MS.gene005651.t1 | AT5G66380 | 27.835 | 291 | 191 | 9 | 27 | 299 | 10 | 299 | 2.01e-20 | 89.7 |
| MS.gene005651.t1 | AT5G66380 | 24.752 | 202 | 134 | 6 | 25 | 210 | 109 | 308 | 4.13e-11 | 63.2 |
| MS.gene005651.t1 | AT5G48970 | 26.316 | 304 | 182 | 9 | 31 | 294 | 27 | 328 | 1.15e-19 | 88.2 |
| MS.gene005651.t1 | AT5G48970 | 27.053 | 207 | 122 | 6 | 26 | 205 | 135 | 339 | 1.04e-11 | 65.1 |
| MS.gene005651.t1 | AT3G53940 | 26.689 | 296 | 194 | 8 | 25 | 299 | 66 | 359 | 1.56e-19 | 88.2 |
| MS.gene005651.t1 | AT3G53940 | 28.077 | 260 | 150 | 8 | 69 | 297 | 5 | 258 | 4.39e-15 | 75.5 |
| MS.gene005651.t1 | AT3G53940 | 25.000 | 184 | 130 | 3 | 25 | 202 | 179 | 360 | 5.97e-11 | 63.2 |
| MS.gene005651.t1 | AT2G37890 | 24.658 | 292 | 203 | 7 | 23 | 299 | 42 | 331 | 3.79e-18 | 84.0 |
| MS.gene005651.t1 | AT1G07030 | 28.244 | 262 | 171 | 8 | 23 | 274 | 36 | 290 | 6.99e-18 | 82.8 |
| MS.gene005651.t1 | AT2G26360 | 26.523 | 279 | 172 | 8 | 30 | 298 | 119 | 374 | 1.07e-17 | 83.2 |
| MS.gene005651.t1 | AT1G25380 | 27.715 | 267 | 176 | 9 | 42 | 294 | 37 | 300 | 2.79e-17 | 81.6 |
| MS.gene005651.t1 | AT1G25380 | 27.715 | 267 | 176 | 9 | 42 | 294 | 37 | 300 | 2.79e-17 | 81.6 |
| MS.gene005651.t1 | AT1G34065 | 25.267 | 281 | 185 | 7 | 21 | 299 | 70 | 327 | 6.52e-17 | 80.5 |
| MS.gene005651.t1 | AT1G34065 | 25.267 | 281 | 185 | 7 | 21 | 299 | 77 | 334 | 9.78e-17 | 80.1 |
| MS.gene005651.t1 | AT3G21390 | 26.518 | 313 | 171 | 11 | 30 | 294 | 45 | 346 | 1.03e-16 | 80.1 |
| MS.gene005651.t1 | AT3G21390 | 26.518 | 313 | 171 | 11 | 30 | 294 | 23 | 324 | 1.06e-16 | 79.7 |
| MS.gene005651.t1 | AT5G51050 | 29.944 | 177 | 117 | 3 | 30 | 202 | 322 | 495 | 1.29e-16 | 80.5 |
| MS.gene005651.t1 | AT5G51050 | 25.704 | 284 | 191 | 7 | 24 | 298 | 221 | 493 | 1.89e-15 | 77.0 |
| MS.gene005651.t1 | AT2G47490 | 29.710 | 276 | 167 | 9 | 42 | 299 | 33 | 299 | 2.98e-16 | 78.2 |
| MS.gene005651.t1 | AT1G74240 | 25.879 | 313 | 184 | 10 | 22 | 297 | 32 | 333 | 4.02e-16 | 78.2 |
| MS.gene005651.t1 | AT1G74240 | 24.365 | 197 | 127 | 4 | 125 | 299 | 39 | 235 | 8.07e-11 | 62.8 |
| MS.gene005651.t1 | AT4G01100 | 26.131 | 199 | 121 | 4 | 27 | 202 | 99 | 294 | 4.36e-16 | 77.4 |
| MS.gene005651.t1 | AT4G01100 | 23.129 | 294 | 190 | 8 | 42 | 303 | 8 | 297 | 2.61e-11 | 63.5 |
| MS.gene005651.t1 | AT4G39460 | 26.275 | 255 | 165 | 5 | 21 | 274 | 53 | 285 | 4.91e-16 | 77.8 |
| MS.gene005651.t1 | AT4G39460 | 26.275 | 255 | 165 | 5 | 21 | 274 | 53 | 285 | 4.91e-16 | 77.8 |
| MS.gene005651.t1 | AT4G39460 | 26.275 | 255 | 165 | 5 | 21 | 274 | 53 | 285 | 4.91e-16 | 77.8 |
| MS.gene005651.t1 | AT4G01100 | 26.131 | 199 | 121 | 4 | 27 | 202 | 163 | 358 | 6.88e-16 | 77.8 |
| MS.gene005651.t1 | AT4G01100 | 22.384 | 344 | 213 | 10 | 10 | 303 | 22 | 361 | 9.47e-12 | 65.5 |
| MS.gene005651.t1 | AT4G01100 | 26.131 | 199 | 121 | 4 | 27 | 202 | 149 | 344 | 7.81e-16 | 77.4 |
| MS.gene005651.t1 | AT4G01100 | 22.727 | 330 | 215 | 9 | 10 | 303 | 22 | 347 | 4.66e-13 | 69.3 |
| MS.gene005651.t1 | AT2G35800 | 25.368 | 272 | 167 | 8 | 30 | 290 | 549 | 795 | 8.99e-16 | 78.2 |
| MS.gene005651.t1 | AT3G53940 | 28.077 | 260 | 150 | 8 | 69 | 297 | 5 | 258 | 1.52e-15 | 75.9 |
| MS.gene005651.t1 | AT3G55640 | 29.319 | 191 | 117 | 5 | 121 | 297 | 37 | 223 | 1.66e-15 | 75.1 |
| MS.gene005651.t1 | AT3G55640 | 29.319 | 191 | 117 | 5 | 121 | 297 | 37 | 223 | 1.66e-15 | 75.1 |
| MS.gene005651.t1 | AT1G79900 | 30.539 | 167 | 105 | 5 | 34 | 196 | 118 | 277 | 2.54e-15 | 75.5 |
| MS.gene005651.t1 | AT1G79900 | 27.092 | 251 | 156 | 8 | 41 | 281 | 31 | 264 | 3.39e-15 | 75.1 |
| MS.gene005651.t1 | AT3G55640 | 25.263 | 285 | 192 | 7 | 30 | 297 | 42 | 322 | 3.91e-15 | 75.1 |
| MS.gene005651.t1 | AT3G55640 | 29.319 | 191 | 117 | 5 | 121 | 297 | 37 | 223 | 4.14e-15 | 75.1 |
| MS.gene005651.t1 | AT3G55640 | 25.263 | 285 | 192 | 7 | 30 | 297 | 42 | 322 | 3.91e-15 | 75.1 |
| MS.gene005651.t1 | AT3G55640 | 29.319 | 191 | 117 | 5 | 121 | 297 | 37 | 223 | 4.14e-15 | 75.1 |
| MS.gene005651.t1 | AT5G61810 | 28.249 | 177 | 119 | 4 | 30 | 202 | 160 | 332 | 6.03e-15 | 74.7 |
| MS.gene005651.t1 | AT5G61810 | 28.249 | 177 | 119 | 4 | 30 | 202 | 303 | 475 | 1.01e-14 | 74.7 |
| MS.gene005651.t1 | AT4G26180 | 21.767 | 317 | 206 | 8 | 9 | 297 | 4 | 306 | 1.16e-14 | 73.9 |
| MS.gene005651.t1 | AT4G32400 | 28.736 | 174 | 113 | 4 | 37 | 204 | 219 | 387 | 1.33e-14 | 73.9 |
| MS.gene005651.t1 | AT4G32400 | 25.368 | 272 | 188 | 8 | 34 | 299 | 122 | 384 | 6.66e-14 | 72.0 |
| MS.gene005651.t1 | AT4G26180 | 23.346 | 257 | 167 | 6 | 9 | 244 | 4 | 251 | 2.31e-14 | 72.4 |
| MS.gene005651.t1 | AT5G46800 | 27.915 | 283 | 173 | 9 | 39 | 297 | 21 | 296 | 3.33e-14 | 72.0 |
| MS.gene005651.t1 | AT5G46800 | 26.154 | 195 | 128 | 3 | 121 | 299 | 7 | 201 | 1.66e-12 | 67.0 |
| MS.gene005651.t1 | AT5G46800 | 27.915 | 283 | 173 | 9 | 39 | 297 | 21 | 296 | 3.33e-14 | 72.0 |
| MS.gene005651.t1 | AT5G46800 | 26.154 | 195 | 128 | 3 | 121 | 299 | 7 | 201 | 1.66e-12 | 67.0 |
| MS.gene005651.t1 | AT5G46800 | 27.915 | 283 | 173 | 9 | 39 | 297 | 21 | 296 | 3.33e-14 | 72.0 |
| MS.gene005651.t1 | AT5G46800 | 26.154 | 195 | 128 | 3 | 121 | 299 | 7 | 201 | 1.66e-12 | 67.0 |
| MS.gene005651.t1 | AT1G74240 | 26.190 | 294 | 169 | 10 | 41 | 297 | 3 | 285 | 4.85e-14 | 72.0 |
| MS.gene005651.t1 | AT2G30160 | 24.731 | 279 | 193 | 7 | 34 | 299 | 46 | 320 | 9.76e-14 | 71.2 |
| MS.gene005651.t1 | AT5G07320 | 26.857 | 175 | 120 | 4 | 30 | 200 | 304 | 474 | 1.60e-13 | 71.2 |
| MS.gene005651.t1 | AT5G01500 | 25.641 | 273 | 176 | 8 | 38 | 299 | 131 | 387 | 2.87e-13 | 70.1 |
| MS.gene005651.t1 | AT5G48970 | 24.324 | 259 | 166 | 7 | 64 | 294 | 1 | 257 | 3.60e-13 | 68.9 |
| MS.gene005651.t1 | AT5G48970 | 27.053 | 207 | 122 | 6 | 26 | 205 | 64 | 268 | 4.60e-12 | 65.5 |
| MS.gene005651.t1 | AT3G51870 | 25.461 | 271 | 176 | 8 | 38 | 296 | 103 | 359 | 4.73e-13 | 69.3 |
| MS.gene005651.t1 | AT3G48850 | 26.829 | 246 | 151 | 8 | 25 | 251 | 66 | 301 | 1.32e-12 | 67.8 |
| MS.gene005651.t1 | AT2G39970 | 24.918 | 305 | 186 | 7 | 39 | 302 | 21 | 323 | 1.59e-12 | 67.4 |
| MS.gene005651.t1 | AT3G20240 | 22.896 | 297 | 200 | 6 | 24 | 299 | 50 | 338 | 1.95e-11 | 64.3 |
| MS.gene005651.t1 | AT1G14560 | 23.929 | 280 | 184 | 10 | 42 | 297 | 43 | 317 | 3.42e-11 | 63.5 |
Find 0 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTAATAAAATACAATAA+GGG | + | 8683:190633-190652 | MS.gene005651:intron | 10.0% |
| !!! | TTTTCTAATAAAATACAATA+AGG | + | 8683:190632-190651 | MS.gene005651:intron | 10.0% |
| !! | AAACAAATTTAGAAAAACAA+TGG | - | 8683:190050-190069 | None:intergenic | 15.0% |
| !! | AATTACATTTATATTATGTG+AGG | + | 8683:191536-191555 | MS.gene005651:CDS | 15.0% |
| !! | ACATAATATAAATGTAATTG+TGG | - | 8683:191535-191554 | None:intergenic | 15.0% |
| !! | ATCTTGTATATTATATAGTT+AGG | + | 8683:188972-188991 | MS.gene005651:intron | 15.0% |
| !! | ATTATTATAAAGAGAAAAAC+AGG | - | 8683:188915-188934 | None:intergenic | 15.0% |
| !! | GTTTAATTGAAAGTAAATTA+GGG | - | 8683:190028-190047 | None:intergenic | 15.0% |
| !! | TCTTGTATATTATATAGTTA+GGG | + | 8683:188973-188992 | MS.gene005651:intron | 15.0% |
| !!! | ATTTTATTCTTATTCTTTCT+GGG | + | 8683:189100-189119 | MS.gene005651:intron | 15.0% |
| !!! | GTTTTGTATTATAATGTAAT+AGG | - | 8683:189452-189471 | None:intergenic | 15.0% |
| !!! | TATTTTATTCTTATTCTTTC+TGG | + | 8683:189099-189118 | MS.gene005651:intron | 15.0% |
| !! | AAAGCTAATAACTAAGAATT+AGG | - | 8683:191228-191247 | None:intergenic | 20.0% |
| !! | ATACAAGATATCAATCAAAT+TGG | - | 8683:188961-188980 | None:intergenic | 20.0% |
| !! | GGTTTAATTGAAAGTAAATT+AGG | - | 8683:190029-190048 | None:intergenic | 20.0% |
| !! | GTATTATAATGTAATAGGTA+AGG | - | 8683:189447-189466 | None:intergenic | 20.0% |
| !! | GTTAAATAGCATTAAAGTTT+AGG | - | 8683:191456-191475 | None:intergenic | 20.0% |
| !! | TAAAGATGTTATCATTAAGT+TGG | + | 8683:189203-189222 | MS.gene005651:intron | 20.0% |
| !! | TCTTCTCAACATATTATTAA+AGG | - | 8683:189246-189265 | None:intergenic | 20.0% |
| !! | TGAAAAATAATGAATGTATC+AGG | + | 8683:188778-188797 | MS.gene005651:intron | 20.0% |
| !!! | AAAGAAGTATAGAACTTATA+TGG | - | 8683:191176-191195 | None:intergenic | 20.0% |
| !!! | AGCAATTTTAACTAAAACAT+TGG | - | 8683:189654-189673 | None:intergenic | 20.0% |
| !!! | ATATCATTGTTTTACATGAT+TGG | - | 8683:191285-191304 | None:intergenic | 20.0% |
| !!! | GAGAAGAAACTATTTTATTT+GGG | + | 8683:189259-189278 | MS.gene005651:intron | 20.0% |
| !!! | GTATTTTATTAGAAAACACA+AGG | - | 8683:190628-190647 | None:intergenic | 20.0% |
| !!! | TATCATTGTTTTACATGATT+GGG | - | 8683:191284-191303 | None:intergenic | 20.0% |
| !!! | TCTTAGTTATTAGCTTTTAA+TGG | + | 8683:191231-191250 | MS.gene005651:intron | 20.0% |
| !!! | TGAGAAGAAACTATTTTATT+TGG | + | 8683:189258-189277 | MS.gene005651:intron | 20.0% |
| !!! | TGTTTTAGTTAAAATTGCTT+CGG | + | 8683:189655-189674 | MS.gene005651:CDS | 20.0% |
| !!! | TTTTTTTTTGCTTAATGTAC+AGG | - | 8683:189757-189776 | None:intergenic | 20.0% |
| ! | ATAAATGTAATTGTGGTTTG+TGG | - | 8683:191528-191547 | None:intergenic | 25.0% |
| ! | ATAAGAACACAAATTCTTCA+CGG | - | 8683:190585-190604 | None:intergenic | 25.0% |
| ! | ATTACAATTACAACTTGTGA+TGG | - | 8683:188742-188761 | None:intergenic | 25.0% |
| ! | CTTCATTATTCTTCACTATA+TGG | - | 8683:190249-190268 | None:intergenic | 25.0% |
| ! | GGTGGTAGAATATATAAAAA+TGG | + | 8683:191021-191040 | MS.gene005651:CDS | 25.0% |
| ! | TGAGAAAACAATTTAATACC+TGG | - | 8683:191062-191081 | None:intergenic | 25.0% |
| ! | TTATATGAAACAATGTCAAG+AGG | + | 8683:190519-190538 | MS.gene005651:intron | 25.0% |
| ! | TTTCATCTACATCTTATGTA+TGG | + | 8683:190119-190138 | MS.gene005651:intron | 25.0% |
| !! | ATAGTTAGTTTGACATTAGT+TGG | + | 8683:190460-190479 | MS.gene005651:intron | 25.0% |
| !! | CAATGATATATTTTCTGATC+TGG | + | 8683:191296-191315 | MS.gene005651:intron | 25.0% |
| !! | GAAACAATGATTTTCAACAT+TGG | + | 8683:190399-190418 | MS.gene005651:intron | 25.0% |
| !! | TACATTCTTTAACTTTGACT+AGG | + | 8683:191198-191217 | MS.gene005651:intron | 25.0% |
| !! | TAGTTAGTTTGACATTAGTT+GGG | + | 8683:190461-190480 | MS.gene005651:intron | 25.0% |
| !!! | GTTTTAGTTAAAATTGCTTC+GGG | + | 8683:189656-189675 | MS.gene005651:CDS | 25.0% |
| AAACCCAGATATAAAGACTT+AGG | - | 8683:189536-189555 | None:intergenic | 30.0% | |
| CAAAGATTGACCAAAATCAT+GGG | + | 8683:190212-190231 | MS.gene005651:intron | 30.0% | |
| CAATTCCAACTGTTACAATT+AGG | - | 8683:190662-190681 | None:intergenic | 30.0% | |
| GATGATTTATTGATACATCG+AGG | + | 8683:189058-189077 | MS.gene005651:intron | 30.0% | |
| TTAACAAGGTCAGTTGTTTA+TGG | + | 8683:189566-189585 | MS.gene005651:CDS | 30.0% | |
| TTAAGTCACATCTCTGATAA+TGG | - | 8683:190884-190903 | None:intergenic | 30.0% | |
| TTATATTATGTGAGGAGCTA+AGG | + | 8683:191544-191563 | MS.gene005651:CDS | 30.0% | |
| TTATGCAGATTCTAGTCAAA+TGG | + | 8683:190078-190097 | MS.gene005651:intron | 30.0% | |
| TTCACACTATTTGCAAGATT+AGG | + | 8683:191501-191520 | MS.gene005651:CDS | 30.0% | |
| TTGCAAATGAATTCAGACAT+GGG | + | 8683:189818-189837 | MS.gene005651:CDS | 30.0% | |
| TTTATATATTCTACCACCCT+TGG | - | 8683:191019-191038 | None:intergenic | 30.0% | |
| TTTGCAAATGAATTCAGACA+TGG | + | 8683:189817-189836 | MS.gene005651:CDS | 30.0% | |
| ! | ATCCATTTAGAATTCATTGC+AGG | - | 8683:190756-190775 | None:intergenic | 30.0% |
| ! | GTCAATTAAGCATTTTTCCA+GGG | + | 8683:189476-189495 | MS.gene005651:intron | 30.0% |
| ! | TGTCAATTAAGCATTTTTCC+AGG | + | 8683:189475-189494 | MS.gene005651:intron | 30.0% |
| ! | TTAATGCTATTTAACATCCG+AGG | + | 8683:191461-191480 | MS.gene005651:intron | 30.0% |
| !! | AAAGGGTGAGTTTTATGTTT+GGG | + | 8683:191394-191413 | MS.gene005651:intron | 30.0% |
| !! | ACATCTCTGATAATGGAAAA+TGG | - | 8683:190877-190896 | None:intergenic | 30.0% |
| !! | CATGATTTTGGTCAATCTTT+GGG | - | 8683:190213-190232 | None:intergenic | 30.0% |
| !! | TAAAGGGTGAGTTTTATGTT+TGG | + | 8683:191393-191412 | MS.gene005651:intron | 30.0% |
| !!! | CTCTGCTTCTTTATTTTAAG+TGG | + | 8683:191121-191140 | MS.gene005651:intron | 30.0% |
| AAATGGACATCTCTCAAAGA+AGG | + | 8683:190095-190114 | MS.gene005651:CDS | 35.0% | |
| AAGTGATTGAAAACAGTGGA+AGG | - | 8683:188832-188851 | None:intergenic | 35.0% | |
| ACATCAATTACTCATCCTCT+AGG | + | 8683:188883-188902 | MS.gene005651:CDS | 35.0% | |
| AGCCTGCAATGAATTCTAAA+TGG | + | 8683:190751-190770 | MS.gene005651:intron | 35.0% | |
| AGGACCTAAGTCTTTATATC+TGG | + | 8683:189529-189548 | MS.gene005651:CDS | 35.0% | |
| AGTCTGCATTAAGAGAGATA+TGG | - | 8683:190167-190186 | None:intergenic | 35.0% | |
| AGTGATTGAAAACAGTGGAA+GGG | - | 8683:188831-188850 | None:intergenic | 35.0% | |
| CCAAAGATTGACCAAAATCA+TGG | + | 8683:190211-190230 | MS.gene005651:intron | 35.0% | |
| CTAATGAATTCAGACTTGTG+TGG | - | 8683:190829-190848 | None:intergenic | 35.0% | |
| CTACTACTACTCATTAGTGA+TGG | + | 8683:189021-189040 | MS.gene005651:intron | 35.0% | |
| CTTGTTGCAAATGCAAGATT+AGG | + | 8683:190723-190742 | MS.gene005651:intron | 35.0% | |
| GAAAGTAAATTAGGGAGATG+AGG | - | 8683:190020-190039 | None:intergenic | 35.0% | |
| GAAGAAACAAAGTTGTAACC+TGG | - | 8683:188685-188704 | None:intergenic | 35.0% | |
| GGAAACCTAATTGTAACAGT+TGG | + | 8683:190654-190673 | MS.gene005651:intron | 35.0% | |
| GGACCTAAGTCTTTATATCT+GGG | + | 8683:189530-189549 | MS.gene005651:CDS | 35.0% | |
| GTAATAGGTAAGGTCTAAAG+AGG | - | 8683:189437-189456 | None:intergenic | 35.0% | |
| TACTTATGATGAAACCAAGC+AGG | + | 8683:189961-189980 | MS.gene005651:CDS | 35.0% | |
| TGAACTACCATTCCACTTAA+AGG | - | 8683:189399-189418 | None:intergenic | 35.0% | |
| TGCAAAGTGATTGAAAACAG+TGG | - | 8683:188836-188855 | None:intergenic | 35.0% | |
| TGCAAATGAATTCAGACATG+GGG | + | 8683:189819-189838 | MS.gene005651:CDS | 35.0% | |
| TTAAGCGTGGTGAAAAATGA+AGG | + | 8683:189509-189528 | MS.gene005651:CDS | 35.0% | |
| TTCAATCACTTTGCAACAAG+TGG | + | 8683:188841-188860 | MS.gene005651:CDS | 35.0% | |
| TTGACATTAGTTGGGAACTT+GGG | + | 8683:190469-190488 | MS.gene005651:intron | 35.0% | |
| TTTGACATTAGTTGGGAACT+TGG | + | 8683:190468-190487 | MS.gene005651:intron | 35.0% | |
| ! | ACATCGAGGATAGATCTTTT+AGG | + | 8683:189072-189091 | MS.gene005651:intron | 35.0% |
| ! | ACTTTAGAAATTGACCTGCT+TGG | - | 8683:189978-189997 | None:intergenic | 35.0% |
| ! | ATTTAGAATTCATTGCAGGC+TGG | - | 8683:190752-190771 | None:intergenic | 35.0% |
| !! | CCATGATTTTGGTCAATCTT+TGG | - | 8683:190214-190233 | None:intergenic | 35.0% |
| !! | GTCCAAGAGCACTTTATAAA+GGG | + | 8683:191377-191396 | MS.gene005651:CDS | 35.0% |
| !! | TAGAACAAACAAAGTACTGC+AGG | - | 8683:191094-191113 | None:intergenic | 35.0% |
| !!! | ACGTGTTTTAACCATATCCA+TGG | - | 8683:190977-190996 | None:intergenic | 35.0% |
| !!! | CGTGTTTTAACCATATCCAT+GGG | - | 8683:190976-190995 | None:intergenic | 35.0% |
| AAAAACAGGAACGAACCTAG+AGG | - | 8683:188901-188920 | None:intergenic | 40.0% | |
| AAAACCATATTCCCGCAATC+AGG | + | 8683:189790-189809 | MS.gene005651:intron | 40.0% | |
| AAAGTTGTAACCTGGAAGTG+AGG | - | 8683:188677-188696 | None:intergenic | 40.0% | |
| AACTGCATTCACCAATCCAA+TGG | + | 8683:189700-189719 | MS.gene005651:CDS | 40.0% | |
| AACTGTGCTTGAGCTGTATA+AGG | - | 8683:190923-190942 | None:intergenic | 40.0% | |
| AATGAATTCAGACATGGGGA+AGG | + | 8683:189823-189842 | MS.gene005651:CDS | 40.0% | |
| ACAACTGACCTTGTTAAAGC+AGG | - | 8683:189563-189582 | None:intergenic | 40.0% | |
| ACAAGGTCAGTTGTTTATGG+AGG | + | 8683:189569-189588 | MS.gene005651:CDS | 40.0% | |
| ACTGAGATAGTCTAAAGGCA+GGG | + | 8683:190492-190511 | MS.gene005651:intron | 40.0% | |
| AGGAGATGAGAAGCAGAATT+GGG | + | 8683:188798-188817 | MS.gene005651:intron | 40.0% | |
| AGGCTACAAATGCAACTTGT+TGG | + | 8683:189363-189382 | MS.gene005651:CDS | 40.0% | |
| AGGTAAGGTCTAAAGAGGAA+AGG | - | 8683:189432-189451 | None:intergenic | 40.0% | |
| ATCCATGGGAGCAGTTATAA+GGG | - | 8683:190962-190981 | None:intergenic | 40.0% | |
| ATGAATTCAGACATGGGGAA+GGG | + | 8683:189824-189843 | MS.gene005651:CDS | 40.0% | |
| ATGTTGCAACGAGAATCCAA+GGG | + | 8683:191000-191019 | MS.gene005651:CDS | 40.0% | |
| CAATCCAATGGAAGTTCTCA+AGG | + | 8683:189712-189731 | MS.gene005651:CDS | 40.0% | |
| CCCTCAACTAATAGACCTAA+GGG | - | 8683:190428-190447 | None:intergenic | 40.0% | |
| CCCTTAGGTCTATTAGTTGA+GGG | + | 8683:190425-190444 | MS.gene005651:intron | 40.0% | |
| CCTCAACTAATAGACCTAAG+GGG | - | 8683:190427-190446 | None:intergenic | 40.0% | |
| CGCTTAAAAACAATTGTCCC+TGG | - | 8683:189496-189515 | None:intergenic | 40.0% | |
| CTTGAGAACTTCCATTGGAT+TGG | - | 8683:189714-189733 | None:intergenic | 40.0% | |
| GAAACAATGTCAAGAGGTGA+GGG | + | 8683:190525-190544 | MS.gene005651:intron | 40.0% | |
| GTGATTGAAAACAGTGGAAG+GGG | - | 8683:188830-188849 | None:intergenic | 40.0% | |
| GTTTGACACCTGCTTTAACA+AGG | + | 8683:189552-189571 | MS.gene005651:CDS | 40.0% | |
| TAACAGTTGGAATTGTTGCC+AGG | + | 8683:190667-190686 | MS.gene005651:intron | 40.0% | |
| TATAACTGCTCCCATGGATA+TGG | + | 8683:190963-190982 | MS.gene005651:CDS | 40.0% | |
| TATCCATGGGAGCAGTTATA+AGG | - | 8683:190963-190982 | None:intergenic | 40.0% | |
| TCACTTTCAAGACATCTGCA+CGG | - | 8683:189344-189363 | None:intergenic | 40.0% | |
| TCCCTCAACTAATAGACCTA+AGG | - | 8683:190429-190448 | None:intergenic | 40.0% | |
| TGAAACAATGTCAAGAGGTG+AGG | + | 8683:190524-190543 | MS.gene005651:intron | 40.0% | |
| TGGATTTAACTGTGCATACC+AGG | + | 8683:191041-191060 | MS.gene005651:CDS | 40.0% | |
| TTGGGACTGAGATAGTCTAA+AGG | + | 8683:190487-190506 | MS.gene005651:intron | 40.0% | |
| ! | CACCCTTTATAAAGTGCTCT+TGG | - | 8683:191382-191401 | None:intergenic | 40.0% |
| ! | GAAGTTGTTGCCCATGATTT+TGG | - | 8683:190225-190244 | None:intergenic | 40.0% |
| ! | GGTGTGCTGATAGAAAACAT+AGG | - | 8683:190808-190827 | None:intergenic | 40.0% |
| ! | GTTTGGGATGCATTTGTACA+CGG | + | 8683:191410-191429 | MS.gene005651:intron | 40.0% |
| ! | TTTCAGGTCCTACTTACAGA+GGG | + | 8683:191355-191374 | MS.gene005651:intron | 40.0% |
| !! | AATGCAACTTGTTGGTCAGA+AGG | + | 8683:189371-189390 | MS.gene005651:CDS | 40.0% |
| !! | ATGCAACTTGTTGGTCAGAA+GGG | + | 8683:189372-189391 | MS.gene005651:CDS | 40.0% |
| !! | GGTCCAAGAGCACTTTATAA+AGG | + | 8683:191376-191395 | MS.gene005651:CDS | 40.0% |
| !! | TTAAGAGCATTTGTCGTGTG+TGG | + | 8683:191328-191347 | MS.gene005651:intron | 40.0% |
| !!! | GGGACAATTGTTTTTAAGCG+TGG | + | 8683:189496-189515 | MS.gene005651:intron | 40.0% |
| !!! | TTGCGGGAATATGGTTTTGA+AGG | - | 8683:189788-189807 | None:intergenic | 40.0% |
| AAGAGGGAATCAAAGCTCTG+TGG | + | 8683:189882-189901 | MS.gene005651:CDS | 45.0% | |
| AATCAAAGCTCTGTGGAAGG+GGG | + | 8683:189889-189908 | MS.gene005651:CDS | 45.0% | |
| ACGATCACATGCATGCTTAG+AGG | - | 8683:189618-189637 | None:intergenic | 45.0% | |
| AGGTAATCCGATGCTGACAA+AGG | - | 8683:190788-190807 | None:intergenic | 45.0% | |
| ATCCGATGCTGACAAAGGAT+TGG | - | 8683:190783-190802 | None:intergenic | 45.0% | |
| ATTGCTTCGGGAATGTTTGC+TGG | + | 8683:189668-189687 | MS.gene005651:CDS | 45.0% | |
| CAGGAGATGAGAAGCAGAAT+TGG | + | 8683:188797-188816 | MS.gene005651:intron | 45.0% | |
| CATGTTGCAACGAGAATCCA+AGG | + | 8683:190999-191018 | MS.gene005651:CDS | 45.0% | |
| CCCCTTAGGTCTATTAGTTG+AGG | + | 8683:190424-190443 | MS.gene005651:intron | 45.0% | |
| CCTCTTCAGATATAGTCCTC+CGG | - | 8683:189868-189887 | None:intergenic | 45.0% | |
| CGATCACATGCATGCTTAGA+GGG | - | 8683:189617-189636 | None:intergenic | 45.0% | |
| CGGAGGACTATATCTGAAGA+GGG | + | 8683:189866-189885 | MS.gene005651:CDS | 45.0% | |
| CTCACCTTGAGAACTTCCAT+TGG | - | 8683:189719-189738 | None:intergenic | 45.0% | |
| GAAGGGTCCTTTAAGTGGAA+TGG | + | 8683:189389-189408 | MS.gene005651:CDS | 45.0% | |
| GAATCAAAGCTCTGTGGAAG+GGG | + | 8683:189888-189907 | MS.gene005651:CDS | 45.0% | |
| GACCAATCCTTTGTCAGCAT+CGG | + | 8683:190778-190797 | MS.gene005651:intron | 45.0% | |
| GACTGAGATAGTCTAAAGGC+AGG | + | 8683:190491-190510 | MS.gene005651:intron | 45.0% | |
| GAGGAGCTAAGGAAAATTGC+TGG | + | 8683:191555-191574 | MS.gene005651:CDS | 45.0% | |
| GGAATCAAAGCTCTGTGGAA+GGG | + | 8683:189887-189906 | MS.gene005651:CDS | 45.0% | |
| GGTAGTCACACTTCACATGT+GGG | + | 8683:189121-189140 | MS.gene005651:intron | 45.0% | |
| GTGCAGATGTCTTGAAAGTG+AGG | + | 8683:189343-189362 | MS.gene005651:intron | 45.0% | |
| GTTTATGGAGGACTACGCTT+GGG | + | 8683:189581-189600 | MS.gene005651:CDS | 45.0% | |
| TGTTTATGGAGGACTACGCT+TGG | + | 8683:189580-189599 | MS.gene005651:CDS | 45.0% | |
| TTTCAACATTGGCACCCCTT+AGG | + | 8683:190410-190429 | MS.gene005651:intron | 45.0% | |
| TTTGCAAACGCACCTGATTG+CGG | - | 8683:189805-189824 | None:intergenic | 45.0% | |
| ! | ATCCGAGGTACGTTTTGTCA+GGG | + | 8683:191476-191495 | MS.gene005651:intron | 45.0% |
| ! | CATGCATGTGATCGTGCTTT+TGG | + | 8683:189623-189642 | MS.gene005651:CDS | 45.0% |
| ! | GATGCTGACAAAGGATTGGT+CGG | - | 8683:190779-190798 | None:intergenic | 45.0% |
| ! | GCTAAGGAAAATTGCTGGCT+TGG | + | 8683:191560-191579 | MS.gene005651:CDS | 45.0% |
| ! | GTTTCAGGTCCTACTTACAG+AGG | + | 8683:191354-191373 | MS.gene005651:intron | 45.0% |
| !! | AAGGAAAATTGCTGGCTTGG+AGG | + | 8683:191563-191582 | MS.gene005651:CDS | 45.0% |
| !! | CAAAGTACTGCAGGTTTGAG+AGG | - | 8683:191085-191104 | None:intergenic | 45.0% |
| !!! | ATTAAATATAGATATTTTTA+AGG | - | 8683:189308-189327 | None:intergenic | 5.0% |
| AATTCAGACATGGGGAAGGG+CGG | + | 8683:189827-189846 | MS.gene005651:CDS | 50.0% | |
| AGCCAACTGAGATGCAGTCA+AGG | - | 8683:189942-189961 | None:intergenic | 50.0% | |
| CACATGTGGGCAGGGTAAAT+TGG | + | 8683:189134-189153 | MS.gene005651:intron | 50.0% | |
| CACCCTTATAACTGCTCCCA+TGG | + | 8683:190957-190976 | MS.gene005651:CDS | 50.0% | |
| CACGGTTACATTGACCTACC+TGG | - | 8683:190567-190586 | None:intergenic | 50.0% | |
| CCGGAGGACTATATCTGAAG+AGG | + | 8683:189865-189884 | MS.gene005651:CDS | 50.0% | |
| CTCTTGGACCCTCTGTAAGT+AGG | - | 8683:191366-191385 | None:intergenic | 50.0% | |
| GAAAACAGTGGAAGGGGAGT+TGG | - | 8683:188824-188843 | None:intergenic | 50.0% | |
| GAGCATTTGTCGTGTGTGGT+GGG | + | 8683:191332-191351 | MS.gene005651:intron | 50.0% | |
| GGAATTGTTGCCAGGAGACT+AGG | + | 8683:190675-190694 | MS.gene005651:intron | 50.0% | |
| GGGAATCAAAGCTCTGTGGA+AGG | + | 8683:189886-189905 | MS.gene005651:CDS | 50.0% | |
| GGGTAGTCACACTTCACATG+TGG | + | 8683:189120-189139 | MS.gene005651:intron | 50.0% | |
| GGTCAGAAGGGTCCTTTAAG+TGG | + | 8683:189384-189403 | MS.gene005651:CDS | 50.0% | |
| GTCAAGAGGTGAGGGAAATC+CGG | + | 8683:190533-190552 | MS.gene005651:intron | 50.0% | |
| TACAGCTCAAGCACAGTTGC+AGG | + | 8683:190925-190944 | MS.gene005651:intron | 50.0% | |
| TCAAGAGGTGAGGGAAATCC+GGG | + | 8683:190534-190553 | MS.gene005651:intron | 50.0% | |
| TCACACTTCACATGTGGGCA+GGG | + | 8683:189126-189145 | MS.gene005651:intron | 50.0% | |
| TGCCTTGACTGCATCTCAGT+TGG | + | 8683:189937-189956 | MS.gene005651:CDS | 50.0% | |
| TTGCAAACGCACCTGATTGC+GGG | - | 8683:189804-189823 | None:intergenic | 50.0% | |
| TTGCAACGAGAATCCAAGGG+TGG | + | 8683:191003-191022 | MS.gene005651:CDS | 50.0% | |
| ! | AGAGCATTTGTCGTGTGTGG+TGG | + | 8683:191331-191350 | MS.gene005651:intron | 50.0% |
| ! | CATCCGAGGTACGTTTTGTC+AGG | + | 8683:191475-191494 | MS.gene005651:intron | 50.0% |
| ! | TCCGAGGTACGTTTTGTCAG+GGG | + | 8683:191477-191496 | MS.gene005651:intron | 50.0% |
| !! | GAGCAGTTATAAGGGTGCTC+AGG | - | 8683:190954-190973 | None:intergenic | 50.0% |
| !! | GTCCTCCGGAGCTCTAAAAT+TGG | - | 8683:189854-189873 | None:intergenic | 50.0% |
| !!! | GACCAATTTTAGAGCTCCGG+AGG | + | 8683:189849-189868 | MS.gene005651:CDS | 50.0% |
| !!! | GCGGACCAATTTTAGAGCTC+CGG | + | 8683:189846-189865 | MS.gene005651:CDS | 50.0% |
| AAAGCTCTGTGGAAGGGGGT+GGG | + | 8683:189893-189912 | MS.gene005651:CDS | 55.0% | |
| AGATCCGTGACCTAGTCTCC+TGG | - | 8683:190688-190707 | None:intergenic | 55.0% | |
| CGCACCTGATTGCGGGAATA+TGG | - | 8683:189797-189816 | None:intergenic | 55.0% | |
| CTGAGATGCAGTCAAGGCAG+CGG | - | 8683:189936-189955 | None:intergenic | 55.0% | |
| GCCCCTGACAAAACGTACCT+CGG | - | 8683:191481-191500 | None:intergenic | 55.0% | |
| GCTGGGAATTCCTCACTTCC+AGG | + | 8683:188664-188683 | MS.gene005651:CDS | 55.0% | |
| GTCACACTTCACATGTGGGC+AGG | + | 8683:189125-189144 | MS.gene005651:intron | 55.0% | |
| GTGAGGGAAATCCGGGTCTT+GGG | + | 8683:190541-190560 | MS.gene005651:intron | 55.0% | |
| GTTGCCAGGAGACTAGGTCA+CGG | + | 8683:190681-190700 | MS.gene005651:intron | 55.0% | |
| !! | TGTCGTGTGTGGTGGGTTTC+AGG | + | 8683:191339-191358 | MS.gene005651:intron | 55.0% |
| CAAAGCTCTGTGGAAGGGGG+TGG | + | 8683:189892-189911 | MS.gene005651:CDS | 60.0% | |
| GGTGAGGGAAATCCGGGTCT+TGG | + | 8683:190540-190559 | MS.gene005651:intron | 60.0% | |
| ATCCGGGTCTTGGGCCAGGT+AGG | + | 8683:190550-190569 | MS.gene005651:intron | 65.0% | |
| GACCTACCTGGCCCAAGACC+CGG | - | 8683:190555-190574 | None:intergenic | 65.0% | |
| GGAAATCCGGGTCTTGGGCC+AGG | + | 8683:190546-190565 | MS.gene005651:intron | 65.0% | |
| TGCAGTCAAGGCAGCGGCTC+TGG | - | 8683:189930-189949 | None:intergenic | 65.0% | |
| ! | CAAGGCAGCGGCTCTGGCCA+TGG | - | 8683:189924-189943 | None:intergenic | 70.0% |
| ! | CAGCGGCTCTGGCCATGGCA+GGG | - | 8683:189919-189938 | None:intergenic | 70.0% |
| GAAGGGGGTGGGCCCTGCCA+TGG | + | 8683:189904-189923 | MS.gene005651:CDS | 75.0% | |
| ! | GCAGCGGCTCTGGCCATGGC+AGG | - | 8683:189920-189939 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8683 | gene | 188661 | 191593 | 188661 | ID=MS.gene005651 |
| 8683 | mRNA | 188661 | 191593 | 188661 | ID=MS.gene005651.t1;Parent=MS.gene005651 |
| 8683 | exon | 188661 | 188685 | 188661 | ID=MS.gene005651.t1.exon1;Parent=MS.gene005651.t1 |
| 8683 | CDS | 188661 | 188685 | 188661 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 188800 | 188904 | 188800 | ID=MS.gene005651.t1.exon2;Parent=MS.gene005651.t1 |
| 8683 | CDS | 188800 | 188904 | 188800 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 189349 | 189410 | 189349 | ID=MS.gene005651.t1.exon3;Parent=MS.gene005651.t1 |
| 8683 | CDS | 189349 | 189410 | 189349 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 189497 | 189733 | 189497 | ID=MS.gene005651.t1.exon4;Parent=MS.gene005651.t1 |
| 8683 | CDS | 189497 | 189733 | 189497 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 189812 | 189982 | 189812 | ID=MS.gene005651.t1.exon5;Parent=MS.gene005651.t1 |
| 8683 | CDS | 189812 | 189982 | 189812 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 190086 | 190135 | 190086 | ID=MS.gene005651.t1.exon6;Parent=MS.gene005651.t1 |
| 8683 | CDS | 190086 | 190135 | 190086 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 190930 | 191062 | 190930 | ID=MS.gene005651.t1.exon7;Parent=MS.gene005651.t1 |
| 8683 | CDS | 190930 | 191062 | 190930 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 191361 | 191398 | 191361 | ID=MS.gene005651.t1.exon8;Parent=MS.gene005651.t1 |
| 8683 | CDS | 191361 | 191398 | 191361 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| 8683 | exon | 191497 | 191593 | 191497 | ID=MS.gene005651.t1.exon9;Parent=MS.gene005651.t1 |
| 8683 | CDS | 191497 | 191593 | 191497 | ID=cds.MS.gene005651.t1;Parent=MS.gene005651.t1 |
| Gene Sequence |
| Protein sequence |
