AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005718

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005718.t1 MTR_1g090330 91.640 311 17 2 1 311 1 302 0.0 578
MS.gene005718.t1 MTR_4g018750 36.986 292 167 5 20 306 18 297 1.07e-57 188
MS.gene005718.t1 MTR_4g018750 29.534 193 120 4 16 206 118 296 1.06e-13 70.9
MS.gene005718.t1 MTR_7g066690 35.395 291 171 4 20 305 20 298 1.32e-55 182
MS.gene005718.t1 MTR_7g066690 26.263 198 142 3 111 304 8 205 7.78e-16 77.0
MS.gene005718.t1 MTR_7g066690 29.082 196 123 4 16 209 120 301 1.21e-13 70.5
MS.gene005718.t1 MTR_3g462140 34.471 293 174 4 18 304 16 296 7.57e-51 170
MS.gene005718.t1 MTR_3g100570 33.987 306 173 6 22 305 11 309 9.91e-51 170
MS.gene005718.t1 MTR_5g032420 30.671 313 183 3 22 305 11 318 1.49e-47 162
MS.gene005718.t1 MTR_8g068890 33.117 308 175 6 22 305 11 311 7.95e-47 160
MS.gene005718.t1 MTR_4g018750 36.719 256 145 5 20 270 18 261 2.07e-45 155
MS.gene005718.t1 MTR_4g018750 28.415 183 127 3 126 304 21 203 5.30e-17 80.1
MS.gene005718.t1 MTR_1g088995 31.058 293 185 6 20 311 36 312 4.71e-45 155
MS.gene005718.t1 MTR_1g088995 30.233 172 108 4 113 283 26 186 6.72e-14 71.2
MS.gene005718.t1 MTR_8g086070 33.217 286 171 6 23 305 27 295 1.29e-38 138
MS.gene005718.t1 MTR_4g057850 29.965 287 185 7 14 296 19 293 2.25e-27 108
MS.gene005718.t1 MTR_4g057850 29.381 194 121 6 113 302 17 198 8.06e-15 73.9
MS.gene005718.t1 MTR_8g086070 35.294 187 102 5 23 206 27 197 8.68e-26 102
MS.gene005718.t1 MTR_1g088995 28.922 204 129 5 20 222 36 224 4.45e-22 93.2
MS.gene005718.t1 MTR_1g088995 30.233 172 108 4 113 283 26 186 3.40e-14 71.2
MS.gene005718.t1 MTR_8g066975 26.761 284 189 7 33 307 24 297 3.71e-21 91.7
MS.gene005718.t1 MTR_8g066975 28.141 199 134 5 117 307 4 201 1.74e-15 75.9
MS.gene005718.t1 MTR_5g055410 28.169 284 177 9 33 305 37 304 5.29e-21 92.0
MS.gene005718.t1 MTR_5g030530 26.241 282 193 6 33 307 24 297 9.91e-20 87.8
MS.gene005718.t1 MTR_5g030530 26.667 210 132 5 5 204 96 293 3.31e-13 69.3
MS.gene005718.t1 MTR_5g030530 27.368 190 129 5 123 305 11 198 1.39e-12 67.4
MS.gene005718.t1 MTR_4g119770 26.045 311 190 8 21 300 18 319 1.37e-19 87.8
MS.gene005718.t1 MTR_4g119770 23.223 211 140 5 114 306 4 210 1.00e-14 73.9
MS.gene005718.t1 MTR_4g012850 25.670 261 171 7 32 287 31 273 1.48e-19 87.4
MS.gene005718.t1 MTR_4g012850 30.601 183 111 3 33 211 126 296 1.48e-19 87.4
MS.gene005718.t1 MTR_1g087840 27.931 290 170 12 33 305 35 302 4.20e-19 86.3
MS.gene005718.t1 MTR_7g084400 30.058 173 107 3 16 188 308 466 5.13e-19 87.4
MS.gene005718.t1 MTR_7g084400 25.260 289 187 7 22 304 218 483 3.35e-15 76.3
MS.gene005718.t1 MTR_7g109135 24.375 320 212 10 1 305 1 305 8.50e-19 85.5
MS.gene005718.t1 MTR_1g097890 29.371 286 160 9 22 304 56 302 1.15e-18 85.1
MS.gene005718.t1 MTR_2g102010 25.926 270 164 9 30 287 30 275 1.59e-18 84.3
MS.gene005718.t1 MTR_2g102010 28.902 173 113 3 33 203 126 290 4.38e-14 71.6
MS.gene005718.t1 MTR_2g436930 25.484 310 191 9 21 300 19 318 3.19e-18 84.0
MS.gene005718.t1 MTR_2g436930 25.128 195 130 4 123 305 18 208 4.17e-14 72.0
MS.gene005718.t1 MTR_8g027975 28.351 194 125 5 5 185 139 331 4.21e-17 81.3
MS.gene005718.t1 MTR_8g027975 25.253 198 134 4 115 305 46 236 2.05e-11 64.3
MS.gene005718.t1 MTR_8g076760 24.573 293 191 11 33 309 30 308 1.11e-16 79.3
MS.gene005718.t1 MTR_3g098460 28.977 176 106 4 16 186 298 459 1.20e-16 80.5
MS.gene005718.t1 MTR_8g096050 27.568 185 123 4 4 186 306 481 4.70e-16 79.0
MS.gene005718.t1 MTR_5g009500 28.796 191 123 5 7 185 127 316 6.71e-16 77.4
MS.gene005718.t1 MTR_5g009500 21.595 301 213 6 26 309 47 341 3.79e-13 69.3
MS.gene005718.t1 MTR_7g064980 22.571 319 220 8 5 311 14 317 2.61e-15 75.5
MS.gene005718.t1 MTR_4g119770 23.223 211 140 5 114 306 4 210 3.84e-15 74.3
MS.gene005718.t1 MTR_4g119770 27.419 248 147 7 21 244 18 256 8.45e-15 73.2
MS.gene005718.t1 MTR_7g109135 23.125 320 209 10 1 305 1 298 1.14e-14 73.6
MS.gene005718.t1 MTR_1g012030 22.712 295 200 9 16 305 138 409 1.59e-13 70.9
MS.gene005718.t1 MTR_7g015870 23.779 307 183 11 32 311 36 318 1.73e-13 70.5
MS.gene005718.t1 MTR_7g015870 22.819 298 182 10 32 305 40 313 2.16e-13 70.1
MS.gene005718.t1 MTR_5g081910 22.759 290 168 9 31 281 22 294 2.18e-13 70.1
MS.gene005718.t1 MTR_7g109135 24.793 242 159 8 72 305 1 227 3.78e-13 68.2
MS.gene005718.t1 MTR_3g104600 21.154 312 213 9 16 308 34 331 1.37e-12 67.8
MS.gene005718.t1 MTR_4g088545 22.772 303 201 7 22 308 17 302 1.52e-12 67.4
MS.gene005718.t1 MTR_4g078545 26.087 184 128 4 105 281 60 242 2.59e-12 67.0
MS.gene005718.t1 MTR_7g109135 27.119 177 120 6 132 305 36 206 3.32e-12 65.1
MS.gene005718.t1 MTR_8g098240 26.599 297 182 11 21 310 324 591 1.85e-11 65.1
MS.gene005718.t1 MTR_5g081150 22.185 302 211 5 13 303 30 318 2.04e-11 64.3
MS.gene005718.t1 MTR_7g068340 20.629 286 195 8 31 310 101 360 2.68e-11 64.3
MS.gene005718.t1 MTR_6g015860 21.429 294 191 9 32 305 32 305 3.00e-11 63.5
MS.gene005718.t1 MTR_3g028590 22.761 268 197 5 17 280 93 354 4.28e-11 63.5
MS.gene005718.t1 MTR_3g028590 22.761 268 197 5 17 280 97 358 4.53e-11 63.5
MS.gene005718.t1 MTR_8g092080 23.368 291 171 7 23 305 58 304 5.17e-11 63.2
MS.gene005718.t1 MTR_6g091800 22.549 204 136 4 114 304 13 207 5.65e-11 62.8
MS.gene005718.t1 MTR_4g114320 22.449 196 133 5 112 304 116 295 5.99e-11 63.2
MS.gene005718.t1 MTR_4g114320 24.731 186 116 5 31 211 232 398 6.10e-11 63.2
MS.gene005718.t1 MTR_3g104500 21.555 283 206 9 33 308 50 323 9.28e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005718.t1 AT1G14140 70.000 300 83 3 13 311 12 305 1.17e-153 432
MS.gene005718.t1 AT5G58970 36.395 294 166 5 18 304 17 296 2.59e-56 184
MS.gene005718.t1 AT5G58970 30.508 177 107 4 14 188 117 279 3.27e-14 72.4
MS.gene005718.t1 AT3G54110 34.138 290 176 5 20 305 18 296 2.53e-53 177
MS.gene005718.t1 AT3G54110 29.293 198 121 5 21 216 126 306 5.24e-15 74.7
MS.gene005718.t1 AT4G24570 34.084 311 166 7 22 305 11 309 8.71e-53 176
MS.gene005718.t1 AT2G22500 33.663 303 176 6 22 305 11 307 2.76e-47 161
MS.gene005718.t1 AT4G03115 30.303 297 181 6 19 311 40 314 2.12e-42 149
MS.gene005718.t1 AT4G03115 30.303 297 181 6 19 311 72 346 7.29e-42 148
MS.gene005718.t1 AT5G09470 33.585 265 162 7 41 303 77 329 3.05e-41 146
MS.gene005718.t1 AT4G03115 30.682 264 159 5 50 311 2 243 7.40e-39 137
MS.gene005718.t1 AT5G19760 32.042 284 177 6 23 305 24 292 1.25e-38 138
MS.gene005718.t1 AT4G03115 30.769 260 156 5 54 311 14 251 4.24e-38 135
MS.gene005718.t1 AT5G58970 33.607 244 146 5 18 252 17 253 1.52e-35 129
MS.gene005718.t1 AT5G58970 26.064 188 135 3 121 304 17 204 1.97e-16 78.2
MS.gene005718.t1 AT5G01340 30.584 291 179 10 14 296 14 289 1.09e-28 112
MS.gene005718.t1 AT5G01340 27.320 194 125 5 113 302 12 193 1.10e-11 65.1
MS.gene005718.t1 AT1G25380 27.208 283 182 9 33 305 37 305 1.09e-22 97.1
MS.gene005718.t1 AT1G25380 27.208 283 182 9 33 305 37 305 1.09e-22 97.1
MS.gene005718.t1 AT2G47490 27.957 279 183 10 33 305 33 299 1.45e-21 93.2
MS.gene005718.t1 AT5G46800 27.305 282 185 7 33 303 24 296 7.71e-21 90.9
MS.gene005718.t1 AT5G46800 26.042 192 132 3 123 305 11 201 2.91e-15 75.1
MS.gene005718.t1 AT5G46800 27.305 282 185 7 33 303 24 296 7.71e-21 90.9
MS.gene005718.t1 AT5G46800 26.042 192 132 3 123 305 11 201 2.91e-15 75.1
MS.gene005718.t1 AT5G46800 27.305 282 185 7 33 303 24 296 7.71e-21 90.9
MS.gene005718.t1 AT5G46800 26.042 192 132 3 123 305 11 201 2.91e-15 75.1
MS.gene005718.t1 AT4G03115 26.540 211 120 5 19 220 40 224 2.59e-19 85.1
MS.gene005718.t1 AT4G03115 26.540 211 120 5 19 220 40 224 3.51e-19 85.1
MS.gene005718.t1 AT1G79900 25.475 263 160 7 32 287 31 264 1.10e-18 85.1
MS.gene005718.t1 AT1G79900 30.159 189 107 4 33 217 126 293 7.41e-16 77.0
MS.gene005718.t1 AT3G21390 24.155 207 139 4 114 306 9 211 3.99e-17 80.9
MS.gene005718.t1 AT3G21390 25.962 312 187 11 22 300 24 324 2.81e-14 72.8
MS.gene005718.t1 AT3G21390 24.155 207 139 4 114 306 31 233 4.66e-17 81.3
MS.gene005718.t1 AT3G21390 25.962 312 187 11 22 300 46 346 3.38e-14 72.8
MS.gene005718.t1 AT4G32400 24.915 293 194 8 16 304 113 383 5.87e-17 81.3
MS.gene005718.t1 AT4G01100 27.320 194 126 5 6 185 80 272 8.13e-17 79.7
MS.gene005718.t1 AT4G01100 27.320 194 126 5 6 185 144 336 9.92e-17 80.1
MS.gene005718.t1 AT4G01100 27.320 194 126 5 6 185 130 322 1.22e-16 79.7
MS.gene005718.t1 AT3G53940 23.175 315 218 7 2 305 58 359 1.80e-16 79.3
MS.gene005718.t1 AT1G34065 25.424 295 178 8 14 305 72 327 5.40e-16 77.8
MS.gene005718.t1 AT1G34065 25.424 295 178 8 14 305 79 334 6.46e-16 77.8
MS.gene005718.t1 AT5G61810 27.473 182 113 5 8 185 144 310 1.50e-15 76.6
MS.gene005718.t1 AT5G61810 23.051 295 196 9 15 304 62 330 3.02e-11 63.9
MS.gene005718.t1 AT5G48970 25.253 198 132 4 120 305 22 215 1.53e-15 76.6
MS.gene005718.t1 AT5G48970 25.161 310 195 7 21 300 26 328 2.00e-15 76.3
MS.gene005718.t1 AT5G61810 27.473 182 113 5 8 185 287 453 2.51e-15 76.6
MS.gene005718.t1 AT5G61810 23.000 300 200 9 15 309 205 478 7.92e-11 63.2
MS.gene005718.t1 AT2G37890 22.549 306 209 8 13 305 41 331 3.42e-15 75.5
MS.gene005718.t1 AT5G51050 28.249 177 108 5 13 186 314 474 3.53e-15 76.3
MS.gene005718.t1 AT5G51050 22.222 288 197 8 22 304 228 493 2.81e-12 67.4
MS.gene005718.t1 AT5G66380 24.825 286 188 10 34 305 27 299 2.88e-14 72.4
MS.gene005718.t1 AT2G33820 22.667 300 205 7 22 308 23 308 6.41e-14 71.6
MS.gene005718.t1 AT2G33820 26.316 190 131 6 119 303 16 201 6.97e-11 62.4
MS.gene005718.t1 AT4G39460 26.241 282 172 6 23 304 64 309 3.06e-13 69.7
MS.gene005718.t1 AT4G39460 26.241 282 172 6 23 304 64 309 3.06e-13 69.7
MS.gene005718.t1 AT4G39460 26.241 282 172 6 23 304 64 309 3.06e-13 69.7
MS.gene005718.t1 AT2G39970 21.429 280 186 6 31 281 22 296 4.39e-13 69.3
MS.gene005718.t1 AT5G42130 25.197 254 168 5 30 281 131 364 5.78e-13 69.3
MS.gene005718.t1 AT5G15640 23.762 303 181 12 32 308 43 321 6.42e-13 68.6
MS.gene005718.t1 AT5G15640 23.762 303 181 12 32 308 36 314 7.89e-13 68.6
MS.gene005718.t1 AT1G14560 23.958 288 193 11 33 305 43 319 9.13e-13 68.2
MS.gene005718.t1 AT5G13490 25.090 279 194 8 9 280 80 350 2.94e-12 67.0
MS.gene005718.t1 AT5G13490 25.090 279 194 8 9 280 80 350 2.94e-12 67.0
MS.gene005718.t1 AT3G55640 21.739 322 218 9 5 310 27 330 4.14e-12 66.2
MS.gene005718.t1 AT3G55640 21.739 322 218 9 5 310 27 330 4.14e-12 66.2
MS.gene005718.t1 AT1G14560 25.660 265 167 12 33 282 43 292 4.37e-12 66.2
MS.gene005718.t1 AT5G48970 27.778 198 118 7 11 189 54 245 8.79e-12 64.7
MS.gene005718.t1 AT1G07030 25.654 191 127 4 121 311 41 216 1.14e-11 65.1
MS.gene005718.t1 AT1G07030 23.208 293 196 7 21 305 44 315 2.80e-11 63.9
MS.gene005718.t1 AT2G30160 26.630 184 122 3 121 304 43 213 1.20e-11 65.1
MS.gene005718.t1 AT3G53940 21.635 208 147 4 107 305 60 260 1.21e-11 64.7
MS.gene005718.t1 AT2G33820 22.078 308 205 8 22 308 23 316 1.21e-11 65.1
MS.gene005718.t1 AT5G07320 24.865 185 120 5 4 186 288 455 1.24e-11 65.5
MS.gene005718.t1 AT5G07320 22.917 288 192 8 26 309 218 479 1.43e-11 65.5
MS.gene005718.t1 AT3G55640 23.834 193 133 4 121 305 39 225 1.25e-11 64.3
MS.gene005718.t1 AT3G55640 23.834 193 133 4 121 305 39 225 1.25e-11 64.3
MS.gene005718.t1 AT4G11440 23.776 286 186 6 33 310 346 607 1.26e-11 65.9
MS.gene005718.t1 AT4G11440 23.776 286 186 6 33 310 346 607 1.26e-11 65.9
MS.gene005718.t1 AT5G17400 24.314 255 177 7 33 280 30 275 1.65e-11 64.3
MS.gene005718.t1 AT2G33820 25.789 190 132 5 119 303 16 201 5.01e-11 62.8
MS.gene005718.t1 AT1G14560 27.326 172 98 6 31 185 39 200 5.50e-11 62.0

Find 96 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAGGCTCTTTGGATATT+AGG 0.207663 1.2:+67603215 None:intergenic
GGTATTCAACCTCGGTATTC+AGG 0.217370 1.2:-67603305 MS.gene005718:CDS
GTCCGTGGCAATTTGTGTTC+TGG 0.217832 1.2:-67602899 MS.gene005718:CDS
AGGTCCTCTTGGTCTTTATA+AGG 0.243262 1.2:-67605231 MS.gene005718:CDS
TGCTGGGCTCTCTTCTTTCT+AGG 0.261306 1.2:-67602850 None:intergenic
GATGAATCAGGCAGCTAAAA+AGG 0.273180 1.2:-67603030 MS.gene005718:CDS
AATGGACCACCCTCTATTAT+TGG 0.311443 1.2:-67604496 MS.gene005718:CDS
TGTTCACTAAGAAGGCTCTT+TGG 0.330924 1.2:+67603207 None:intergenic
TGTCCTATTTCTTCCGATAA+TGG 0.339922 1.2:-67604514 MS.gene005718:CDS
TTGTTTAGCGTGATCATAAC+AGG 0.343296 1.2:+67603172 None:intergenic
TCCGTGGCAATTTGTGTTCT+GGG 0.361223 1.2:-67602898 MS.gene005718:CDS
AACAGGTGTCTAAGAATTGC+TGG 0.373496 1.2:+67605200 None:intergenic
TGTGGGGAAGAATCCTTTCC+AGG 0.374087 1.2:+67602935 None:intergenic
GGTCCTCTTGGTCTTTATAA+GGG 0.374611 1.2:-67605230 MS.gene005718:CDS
GGTCCATTATCGGAAGAAAT+AGG 0.383288 1.2:+67604511 None:intergenic
GCTGTTGTTGGTGGAATCTC+TGG 0.388443 1.2:-67604469 MS.gene005718:CDS
GTGAAGACTGTTAAAGTTGA+AGG 0.391518 1.2:-67602969 MS.gene005718:CDS
TACACACCTATTCGAATTGT+TGG 0.393931 1.2:-67605176 MS.gene005718:CDS
ATTATTGGCAAGGCTGTTGT+TGG 0.411276 1.2:-67604481 MS.gene005718:CDS
TTCGAATAGGTGTGTAGAAC+AGG 0.411509 1.2:+67605183 None:intergenic
ATTAAAGCTGAAGGATTTCA+AGG 0.413857 1.2:-67603257 MS.gene005718:CDS
TGGTGGAATCTCTGGCAGTA+TGG 0.414492 1.2:-67604461 MS.gene005718:CDS
CTCTCATCAACTCGTCCAAC+CGG 0.418252 1.2:-67605290 MS.gene005718:CDS
ACACACCTATTCGAATTGTT+GGG 0.430490 1.2:-67605175 MS.gene005718:intron
GAGAAGTTTAGAAAATTTGC+TGG 0.430860 1.2:-67602867 MS.gene005718:CDS
TTCCCCACATGGGCAAGGCT+TGG 0.433242 1.2:-67602921 MS.gene005718:CDS
AATGAAATCAGGCAATCAAC+AGG 0.442708 1.2:-67605432 MS.gene005718:CDS
AACAAAATCATTAAAGCTGA+AGG 0.442786 1.2:-67603266 MS.gene005718:CDS
TTGTATGTACCAATGAAATC+AGG 0.445674 1.2:-67605443 None:intergenic
CCATAGACTTGATCAAAACT+AGG 0.447982 1.2:-67605334 MS.gene005718:CDS
CAAGACTAGAATGATGAATC+AGG 0.448668 1.2:-67603042 MS.gene005718:CDS
AATAGAGGGTGGTCCATTAT+CGG 0.449525 1.2:+67604501 None:intergenic
AACAGCCTTGCCAATAATAG+AGG 0.458012 1.2:+67604486 None:intergenic
TGTTGATTGCCTGATTTCAT+TGG 0.460038 1.2:+67605434 None:intergenic
AACAGTACCAACAGGATGTA+TGG 0.461980 1.2:-67604553 MS.gene005718:intron
CCAACCGGTGCATTTCGAAT+AGG 0.474810 1.2:-67605275 MS.gene005718:CDS
TAGAAGCTCTTATGATTGCT+TGG 0.474971 1.2:-67602991 MS.gene005718:CDS
GGTTGGAGAACAGTACCAAC+AGG 0.481920 1.2:-67604561 MS.gene005718:intron
GATAGTCAAATGATGAGAAA+AGG 0.492159 1.2:-67603326 MS.gene005718:CDS
GTATTCAACCTCGGTATTCA+GGG 0.495519 1.2:-67603304 MS.gene005718:CDS
TCATACCCAACAATTCGAAT+AGG 0.500273 1.2:+67605170 None:intergenic
CTCACCTTGACAAGATCAGC+CGG 0.501511 1.2:+67603359 None:intergenic
ATTCGTGAACAAGGTCCTCT+TGG 0.501888 1.2:-67605242 MS.gene005718:CDS
CTAGTCTTGACAACGTCGGC+TGG 0.509654 1.2:+67603056 None:intergenic
AAAACTAGGCTTCAACTCCA+TGG 0.514890 1.2:-67605320 MS.gene005718:CDS
AAGAGCCTTCTTAGTGAACA+TGG 0.517766 1.2:-67603204 MS.gene005718:CDS
ACTAACATCATTATCGGCAA+TGG 0.521097 1.2:-67605378 MS.gene005718:CDS
ACATTAGCTTCCATCATGTC+AGG 0.524522 1.2:-67603104 MS.gene005718:CDS
AAACTAGGCTTCAACTCCAT+GGG 0.527400 1.2:-67605319 MS.gene005718:CDS
TATGGGGAAAGTTGTGGACT+CGG 0.536807 1.2:+67605352 None:intergenic
AGAAGTTTAGAAAATTTGCT+GGG 0.542066 1.2:-67602866 MS.gene005718:CDS
TTCCATCATGTCAGGTCTTG+CGG 0.542079 1.2:-67603096 MS.gene005718:CDS
AATCTCTGGCAGTATGGCTC+AGG 0.544027 1.2:-67604455 MS.gene005718:intron
AGTACAGGTTATAGCAAGCC+CGG 0.545462 1.2:-67603378 MS.gene005718:intron
GGAATAAGAGCACCCTGGAA+AGG 0.548680 1.2:-67602948 MS.gene005718:CDS
TGCCGCAAGACCTGACATGA+TGG 0.548886 1.2:+67603094 None:intergenic
ATTGGCAAGGCTGTTGTTGG+TGG 0.554471 1.2:-67604478 MS.gene005718:CDS
GATTCTTCCCCACATGGGCA+AGG 0.557802 1.2:-67602926 MS.gene005718:CDS
CGGACCAAGCCTTGCCCATG+TGG 0.564025 1.2:+67602917 None:intergenic
AGGATTTCAAGGACTGTGGA+AGG 0.566008 1.2:-67603246 MS.gene005718:CDS
GGAAAGGATTCTTCCCCACA+TGG 0.581691 1.2:-67602932 MS.gene005718:CDS
CCTATTCGAAATGCACCGGT+TGG 0.586369 1.2:+67605275 None:intergenic
GACCAAGCCTTGCCCATGTG+GGG 0.588505 1.2:+67602919 None:intergenic
CATGGGCAAGGCTTGGTCCG+TGG 0.592432 1.2:-67602914 MS.gene005718:CDS
AACATCATTATCGGCAATGG+TGG 0.595880 1.2:-67605375 MS.gene005718:CDS
TACGCCTATTCGAAATGCAC+CGG 0.596633 1.2:+67605271 None:intergenic
CAAGTCTATGGGGAAAGTTG+TGG 0.599944 1.2:+67605346 None:intergenic
CGGCTGATCTTGTCAAGGTG+AGG 0.604258 1.2:-67603358 MS.gene005718:CDS
GGACCAAGCCTTGCCCATGT+GGG 0.604525 1.2:+67602918 None:intergenic
TCACCTTGACAAGATCAGCC+GGG 0.604841 1.2:+67603360 None:intergenic
GTGGGGAAGAATCCTTTCCA+GGG 0.610495 1.2:+67602936 None:intergenic
ACCACCCTCTATTATTGGCA+AGG 0.614676 1.2:-67604491 MS.gene005718:CDS
GAGCCTTCTTAGTGAACATG+GGG 0.615946 1.2:-67603202 MS.gene005718:CDS
CTGAAGGATTTCAAGGACTG+TGG 0.616907 1.2:-67603250 MS.gene005718:CDS
AGAGCCTTCTTAGTGAACAT+GGG 0.617274 1.2:-67603203 MS.gene005718:CDS
AACAGTACCATACATCCTGT+TGG 0.617821 1.2:+67604546 None:intergenic
TTGATGAGAGTGACTCCCCA+TGG 0.622723 1.2:+67605303 None:intergenic
ACCCAGAACACAAATTGCCA+CGG 0.626367 1.2:+67602897 None:intergenic
GGATTTCAAGGACTGTGGAA+GGG 0.631072 1.2:-67603245 MS.gene005718:CDS
ATGAAATCAGGCAATCAACA+GGG 0.642760 1.2:-67605431 MS.gene005718:CDS
TATTAAAAGTAAGATAGCTG+AGG 0.649871 1.2:-67603144 MS.gene005718:CDS
TTGAAGGAATAAGAGCACCC+TGG 0.653386 1.2:-67602953 MS.gene005718:CDS
ACAGCCTTGCCAATAATAGA+GGG 0.656484 1.2:+67604487 None:intergenic
TGAGAAAAGGTATTCAACCT+CGG 0.670567 1.2:-67603313 MS.gene005718:CDS
AAGCCCTTATAAAGACCAAG+AGG 0.670932 1.2:+67605227 None:intergenic
GTAGACATTATTCGTGAACA+AGG 0.674981 1.2:-67605251 MS.gene005718:CDS
GAAAGGATTCTTCCCCACAT+GGG 0.675704 1.2:-67602931 MS.gene005718:CDS
GCCTTGCCAATAATAGAGGG+TGG 0.679136 1.2:+67604490 None:intergenic
AACTAGGCTTCAACTCCATG+GGG 0.680015 1.2:-67605318 MS.gene005718:CDS
AAGCCCGGCTGATCTTGTCA+AGG 0.681297 1.2:-67603363 MS.gene005718:CDS
CATGATGGAAGCTAATGTGT+GGG 0.692601 1.2:+67603109 None:intergenic
AAATCAGGCAATCAACAGGG+TGG 0.703375 1.2:-67605428 MS.gene005718:CDS
CATTCTAGTCTTGACAACGT+CGG 0.705215 1.2:+67603052 None:intergenic
ACATGATGGAAGCTAATGTG+TGG 0.716855 1.2:+67603108 None:intergenic
TCAAATGGCCCTGAATACCG+AGG 0.724190 1.2:+67603296 None:intergenic
AGCCTTCTTAGTGAACATGG+GGG 0.797499 1.2:-67603201 MS.gene005718:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAGATTATTATATATTTAA+AGG - chr1.2:67603999-67604018 MS.gene005718:intron 10.0%
!! ACTAAAAAAAAAACATTTCA+TGG + chr1.2:67603421-67603440 None:intergenic 15.0%
!! GAAATAAAATATTAGGATTA+TGG - chr1.2:67604644-67604663 MS.gene005718:intron 15.0%
!!! AATCAGAATTTTATAACAAA+AGG + chr1.2:67604415-67604434 None:intergenic 15.0%
!!! ATTTTATGATTTTATCACAA+TGG + chr1.2:67604753-67604772 None:intergenic 15.0%
!!! TTTTTTTTTTAGTAAAACGA+TGG - chr1.2:67603428-67603447 MS.gene005718:intron 15.0%
!! TTATTTACAATTAGTAGTAC+AGG - chr1.2:67604889-67604908 MS.gene005718:intron 20.0%
!!! ACTGTAACTTAACTATTTTT+TGG + chr1.2:67604058-67604077 None:intergenic 20.0%
!!! ATTTTGTTAAAAGCATCAAA+TGG + chr1.2:67605004-67605023 None:intergenic 20.0%
!!! GAAACTAAAATCCTTTAAAA+AGG - chr1.2:67604541-67604560 MS.gene005718:CDS 20.0%
!!! GATTTTACTAACATCATTAT+CGG - chr1.2:67602898-67602917 MS.gene005718:CDS 20.0%
!!! TATAAATCTGTAATTTTCCA+AGG + chr1.2:67604862-67604881 None:intergenic 20.0%
!!! TTTTACTATGTTCATAAATC+CGG + chr1.2:67604164-67604183 None:intergenic 20.0%
! AACAAAATCATTAAAGCTGA+AGG - chr1.2:67605016-67605035 MS.gene005718:intron 25.0%
! AATTTCCTTGACATTCAAAA+GGG + chr1.2:67603323-67603342 None:intergenic 25.0%
! AGAGGTGGAAATAAAATATT+AGG - chr1.2:67604637-67604656 MS.gene005718:intron 25.0%
! ATGTGGATAAATTAATGATG+TGG + chr1.2:67603222-67603241 None:intergenic 25.0%
! ATGTTTATCTTAGTTACTAG+TGG - chr1.2:67604282-67604301 MS.gene005718:intron 25.0%
! ATTGTTTGTCTAACATTTGT+GGG + chr1.2:67604494-67604513 None:intergenic 25.0%
! GAACATAGTAAAAGAATATG+TGG - chr1.2:67604171-67604190 MS.gene005718:intron 25.0%
! TATTAAAAGTAAGATAGCTG+AGG - chr1.2:67605138-67605157 MS.gene005718:intron 25.0%
! TATTGTTTGTCTAACATTTG+TGG + chr1.2:67604495-67604514 None:intergenic 25.0%
! TGTAGGCAATTTATTGTTAA+TGG + chr1.2:67603457-67603476 None:intergenic 25.0%
! TGTTTATCTTAGTTACTAGT+GGG - chr1.2:67604283-67604302 MS.gene005718:intron 25.0%
! TTAACAATAAATTGCCTACA+TGG - chr1.2:67603457-67603476 MS.gene005718:intron 25.0%
! TTAGTAAAGCTTATGCTTAA+GGG + chr1.2:67604446-67604465 None:intergenic 25.0%
!! AAAATCCTTTAAAAAGGTGT+AGG - chr1.2:67604547-67604566 MS.gene005718:CDS 25.0%
!! AAATTTTCTAAACTTCTCGT+AGG + chr1.2:67605413-67605432 None:intergenic 25.0%
!! AGAAGTTTAGAAAATTTGCT+GGG - chr1.2:67605416-67605435 MS.gene005718:CDS 25.0%
!! TGATTGATTGATTCAGTATT+AGG - chr1.2:67604226-67604245 MS.gene005718:intron 25.0%
!! TTTTCCAAGGACAAATATAA+AGG + chr1.2:67604849-67604868 None:intergenic 25.0%
!!! TAATTTGTTAATAGCTGATG+TGG + chr1.2:67603239-67603258 None:intergenic 25.0%
!!! TCTAATCTCTCTTTTAAGTT+TGG - chr1.2:67603345-67603364 MS.gene005718:CDS 25.0%
!!! TTTTAGTTTCCTAAGTTCTT+TGG + chr1.2:67604531-67604550 None:intergenic 25.0%
AAGAAGACGATAAAAGAAAG+AGG + chr1.2:67603275-67603294 None:intergenic 30.0%
AAGTAAATAGAAGACCAACA+AGG - chr1.2:67603391-67603410 MS.gene005718:intron 30.0%
ATCACCTTTATATTTGTCCT+TGG - chr1.2:67604842-67604861 MS.gene005718:intron 30.0%
ATTAAAGCTGAAGGATTTCA+AGG - chr1.2:67605025-67605044 MS.gene005718:intron 30.0%
CAAATATAAAGGTGATCAGT+CGG + chr1.2:67604838-67604857 None:intergenic 30.0%
CTTAGTAAAGCTTATGCTTA+AGG + chr1.2:67604447-67604466 None:intergenic 30.0%
GAATTTCCTTGACATTCAAA+AGG + chr1.2:67603324-67603343 None:intergenic 30.0%
GAGAAGTTTAGAAAATTTGC+TGG - chr1.2:67605415-67605434 MS.gene005718:CDS 30.0%
GATAGTCAAATGATGAGAAA+AGG - chr1.2:67604956-67604975 MS.gene005718:intron 30.0%
GTTTAACTATTAGCATCTCA+TGG + chr1.2:67604695-67604714 None:intergenic 30.0%
GTTTATCTTAGTTACTAGTG+GGG - chr1.2:67604284-67604303 MS.gene005718:intron 30.0%
TAAAAGAAAGAGGAAGGAAA+CGG + chr1.2:67603265-67603284 None:intergenic 30.0%
TCGTCTTCTTTAATCAGTTA+TGG - chr1.2:67603285-67603304 MS.gene005718:CDS 30.0%
! ATGGAACATGTTTAAAACCA+TGG - chr1.2:67603476-67603495 MS.gene005718:intron 30.0%
! TGATTGATTCAGTATTAGGT+AGG - chr1.2:67604230-67604249 MS.gene005718:intron 30.0%
!! GTTTTAAACATGTTCCATGT+AGG + chr1.2:67603474-67603493 None:intergenic 30.0%
!! TAATTTGTTATCGGATGATG+TGG - chr1.2:67603673-67603692 MS.gene005718:intron 30.0%
!! TTGCGGTGTTAATTTGTTAT+CGG - chr1.2:67603664-67603683 MS.gene005718:intron 30.0%
!!! ACTTAACTATTTTTTGGTCC+AGG + chr1.2:67604052-67604071 None:intergenic 30.0%
!!! CTAGTTTTGATCAAGTCTAT+GGG + chr1.2:67602950-67602969 None:intergenic 30.0%
!!! TAGTTTTGATCAAGTCTATG+GGG + chr1.2:67602949-67602968 None:intergenic 30.0%
AAGAAGGCTCTTTGGATATT+AGG + chr1.2:67605070-67605089 None:intergenic 35.0%
ACACACCTATTCGAATTGTT+GGG - chr1.2:67603107-67603126 MS.gene005718:CDS 35.0%
ACGTTATGTATACAACAGAG+TGG + chr1.2:67604323-67604342 None:intergenic 35.0%
ACTAACATCATTATCGGCAA+TGG - chr1.2:67602904-67602923 MS.gene005718:CDS 35.0%
AGACGATAAAAGAAAGAGGA+AGG + chr1.2:67603271-67603290 None:intergenic 35.0%
AGGTTGCAGAAAATTAGCAA+GGG - chr1.2:67603569-67603588 MS.gene005718:intron 35.0%
ATGAAATCAGGCAATCAACA+GGG - chr1.2:67602851-67602870 MS.gene005718:CDS 35.0%
CAAGACTAGAATGATGAATC+AGG - chr1.2:67605240-67605259 MS.gene005718:CDS 35.0%
CAATCTCAACCAAAGAACTT+AGG - chr1.2:67604519-67604538 MS.gene005718:CDS 35.0%
CCATAGACTTGATCAAAACT+AGG - chr1.2:67602948-67602967 MS.gene005718:CDS 35.0%
CTAAGTTCTTTGGTTGAGAT+TGG + chr1.2:67604521-67604540 None:intergenic 35.0%
GGATAAAAGTTCCAAGATTC+AGG - chr1.2:67604020-67604039 MS.gene005718:intron 35.0%
GTAGACATTATTCGTGAACA+AGG - chr1.2:67603031-67603050 MS.gene005718:CDS 35.0%
GTGAAGACTGTTAAAGTTGA+AGG - chr1.2:67605313-67605332 MS.gene005718:CDS 35.0%
GTTAATGGTTGAAGAGAAAC+AGG - chr1.2:67603630-67603649 MS.gene005718:intron 35.0%
TACACACCTATTCGAATTGT+TGG - chr1.2:67603106-67603125 MS.gene005718:CDS 35.0%
TAGAAGCTCTTATGATTGCT+TGG - chr1.2:67605291-67605310 MS.gene005718:CDS 35.0%
TCATACCCAACAATTCGAAT+AGG + chr1.2:67603115-67603134 None:intergenic 35.0%
TTGTTTAGCGTGATCATAAC+AGG + chr1.2:67605113-67605132 None:intergenic 35.0%
TTTCCAATGCACTGTAACTT+TGG - chr1.2:67604793-67604812 MS.gene005718:intron 35.0%
! AATAATGATGTGTCGCGTTT+TGG - chr1.2:67603700-67603719 MS.gene005718:intron 35.0%
! ACATGCCTACACCTTTTTAA+AGG + chr1.2:67604555-67604574 None:intergenic 35.0%
! ACATTCAAAAGGGTCAGTTT+TGG + chr1.2:67603313-67603332 None:intergenic 35.0%
! ATCTTTGAAAATCTCACACC+TGG - chr1.2:67604603-67604622 MS.gene005718:intron 35.0%
! ATTAATGATGTGGTGCGTTT+TGG + chr1.2:67603212-67603231 None:intergenic 35.0%
! CATGTTTAAAACCATGGACA+AGG - chr1.2:67603482-67603501 MS.gene005718:intron 35.0%
! CTGGAACATGTTTAAAACCA+TGG - chr1.2:67603512-67603531 MS.gene005718:intron 35.0%
! TGTCCTATTTCTTCCGATAA+TGG - chr1.2:67603768-67603787 MS.gene005718:intron 35.0%
!! TGAGAAAAGGTATTCAACCT+CGG - chr1.2:67604969-67604988 MS.gene005718:intron 35.0%
!!! CCTAGTTTTGATCAAGTCTA+TGG + chr1.2:67602951-67602970 None:intergenic 35.0%
AAAACTAGGCTTCAACTCCA+TGG - chr1.2:67602962-67602981 MS.gene005718:CDS 40.0%
AAAATATCTTCGACAGTGGC+AGG - chr1.2:67603594-67603613 MS.gene005718:intron 40.0%
AAACTAGGCTTCAACTCCAT+GGG - chr1.2:67602963-67602982 MS.gene005718:CDS 40.0%
AACAGCCTTGCCAATAATAG+AGG + chr1.2:67603799-67603818 None:intergenic 40.0%
AACAGGTGTCTAAGAATTGC+TGG + chr1.2:67603085-67603104 None:intergenic 40.0%
AACAGTACCAACAGGATGTA+TGG - chr1.2:67603729-67603748 MS.gene005718:intron 40.0%
AACAGTACCAACAGGATGTA+TGG + chr1.2:67603748-67603729 None:intergenic 40.0%
AACAGTACCATACATCCTGT+TGG - chr1.2:67603173-67603192 MS.gene005718:CDS 40.0%
AACAGTACCATACATCCTGT+TGG + chr1.2:67603192-67603173 None:intergenic 40.0%
AACATCATTATCGGCAATGG+TGG - chr1.2:67602907-67602926 MS.gene005718:CDS 40.0%
AAGAGCCTTCTTAGTGAACA+TGG - chr1.2:67605078-67605097 MS.gene005718:intron 40.0%
AAGCCCTTATAAAGACCAAG+AGG + chr1.2:67603058-67603077 None:intergenic 40.0%
AATAGAGGGTGGTCCATTAT+CGG + chr1.2:67603784-67603803 None:intergenic 40.0%
AATCAGGCAGCTAAAAAGGA+AGG - chr1.2:67605256-67605275 MS.gene005718:CDS 40.0%
AATGGACCACCCTCTATTAT+TGG - chr1.2:67603786-67603805 MS.gene005718:intron 40.0%
ACAAGGATGAGAACATACGT+TGG - chr1.2:67603535-67603554 MS.gene005718:intron 40.0%
ACAGCCTTGCCAATAATAGA+GGG + chr1.2:67603798-67603817 None:intergenic 40.0%
ACATAACGTCTGTCTTGTCT+TGG - chr1.2:67604334-67604353 MS.gene005718:intron 40.0%
AGAGCCTTCTTAGTGAACAT+GGG - chr1.2:67605079-67605098 MS.gene005718:intron 40.0%
ATCAGGCAGCTAAAAAGGAA+GGG - chr1.2:67605257-67605276 MS.gene005718:CDS 40.0%
ATGTTCATAAATCCGGCAGA+TGG + chr1.2:67604157-67604176 None:intergenic 40.0%
ATTATTGGCAAGGCTGTTGT+TGG - chr1.2:67603801-67603820 MS.gene005718:intron 40.0%
CATTTCATGGAAGACCTTGT+TGG + chr1.2:67603408-67603427 None:intergenic 40.0%
GAGGTTGCAGAAAATTAGCA+AGG - chr1.2:67603568-67603587 MS.gene005718:intron 40.0%
GATGAATCAGGCAGCTAAAA+AGG - chr1.2:67605252-67605271 MS.gene005718:CDS 40.0%
GGGAAAAATATCTTCGACAG+TGG - chr1.2:67603590-67603609 MS.gene005718:intron 40.0%
GGTCCATTATCGGAAGAAAT+AGG + chr1.2:67603774-67603793 None:intergenic 40.0%
GGTTGCAGAAAATTAGCAAG+GGG - chr1.2:67603570-67603589 MS.gene005718:intron 40.0%
GTATTCAACCTCGGTATTCA+GGG - chr1.2:67604978-67604997 MS.gene005718:intron 40.0%
GTGATCAGTCGGTTAAAACA+TGG + chr1.2:67604827-67604846 None:intergenic 40.0%
GTTTGTCTAACATTTGTGGG+TGG + chr1.2:67604491-67604510 None:intergenic 40.0%
TATGTTCTCATCCTTGTCCA+TGG + chr1.2:67603532-67603551 None:intergenic 40.0%
TCTCCAAAGTTACAGTGCAT+TGG + chr1.2:67604799-67604818 None:intergenic 40.0%
TGACTCGTGTATTTCGTTTC+TGG - chr1.2:67604577-67604596 MS.gene005718:intron 40.0%
TGTTCACTAAGAAGGCTCTT+TGG + chr1.2:67605078-67605097 None:intergenic 40.0%
TTCGAATAGGTGTGTAGAAC+AGG + chr1.2:67603102-67603121 None:intergenic 40.0%
! ACATGATGGAAGCTAATGTG+TGG + chr1.2:67605177-67605196 None:intergenic 40.0%
! ACATTAGCTTCCATCATGTC+AGG - chr1.2:67605178-67605197 MS.gene005718:CDS 40.0%
! ACTGACCCTTTTGAATGTCA+AGG - chr1.2:67603315-67603334 MS.gene005718:CDS 40.0%
! AGGTCCTCTTGGTCTTTATA+AGG - chr1.2:67603051-67603070 MS.gene005718:CDS 40.0%
! CATGATGGAAGCTAATGTGT+GGG + chr1.2:67605176-67605195 None:intergenic 40.0%
! GGTCCTCTTGGTCTTTATAA+GGG - chr1.2:67603052-67603071 MS.gene005718:CDS 40.0%
!! AACATACGTTGGTGCTGTAA+AGG - chr1.2:67603546-67603565 MS.gene005718:intron 40.0%
!! CAGATGGTGTTCTTTGAAGT+TGG + chr1.2:67604141-67604160 None:intergenic 40.0%
!! CATTCTAGTCTTGACAACGT+CGG + chr1.2:67605233-67605252 None:intergenic 40.0%
!! CCTCAGGAGTGTTATTTCTT+CGG - chr1.2:67603138-67603157 MS.gene005718:CDS 40.0%
!! TGGTGTTCTTTGAAGTTGGA+AGG + chr1.2:67604137-67604156 None:intergenic 40.0%
AAAATCTCACACCTGGTCTC+AGG - chr1.2:67604610-67604629 MS.gene005718:intron 45.0%
AAATCAGGCAATCAACAGGG+TGG - chr1.2:67602854-67602873 MS.gene005718:CDS 45.0%
AACAGGTCAACGTTTGCTTG+CGG - chr1.2:67603647-67603666 MS.gene005718:intron 45.0%
AACTAGGCTTCAACTCCATG+GGG - chr1.2:67602964-67602983 MS.gene005718:CDS 45.0%
ACCACCCTCTATTATTGGCA+AGG - chr1.2:67603791-67603810 MS.gene005718:intron 45.0%
ACCCAGAACACAAATTGCCA+CGG + chr1.2:67605388-67605407 None:intergenic 45.0%
AGCCTTCTTAGTGAACATGG+GGG - chr1.2:67605081-67605100 MS.gene005718:intron 45.0%
AGGATTTCAAGGACTGTGGA+AGG - chr1.2:67605036-67605055 MS.gene005718:intron 45.0%
AGTACAGGTTATAGCAAGCC+CGG - chr1.2:67604904-67604923 MS.gene005718:intron 45.0%
ATTCGTGAACAAGGTCCTCT+TGG - chr1.2:67603040-67603059 MS.gene005718:CDS 45.0%
CAAGTCTATGGGGAAAGTTG+TGG + chr1.2:67602939-67602958 None:intergenic 45.0%
CATGTGCAAAGCTCTCACAT+AGG + chr1.2:67604381-67604400 None:intergenic 45.0%
CCGAAGAAATAACACTCCTG+AGG + chr1.2:67603141-67603160 None:intergenic 45.0%
CTGAAGGATTTCAAGGACTG+TGG - chr1.2:67605032-67605051 MS.gene005718:intron 45.0%
CTTCAAAGAACACCATCTGC+CGG - chr1.2:67604142-67604161 MS.gene005718:intron 45.0%
GAAAGGATTCTTCCCCACAT+GGG - chr1.2:67605351-67605370 MS.gene005718:CDS 45.0%
GAGAGCTTTGCACATGTTTC+TGG - chr1.2:67604385-67604404 MS.gene005718:intron 45.0%
GAGCCTTCTTAGTGAACATG+GGG - chr1.2:67605080-67605099 MS.gene005718:intron 45.0%
GGATTTCAAGGACTGTGGAA+GGG - chr1.2:67605037-67605056 MS.gene005718:intron 45.0%
GGTATTCAACCTCGGTATTC+AGG - chr1.2:67604977-67604996 MS.gene005718:intron 45.0%
GTGGGTGGCTAATTGTAACA+AGG + chr1.2:67604476-67604495 None:intergenic 45.0%
TACGCCTATTCGAAATGCAC+CGG + chr1.2:67603014-67603033 None:intergenic 45.0%
TATGGGGAAAGTTGTGGACT+CGG + chr1.2:67602933-67602952 None:intergenic 45.0%
TCCGTGGCAATTTGTGTTCT+GGG - chr1.2:67605384-67605403 MS.gene005718:CDS 45.0%
TGGCTCAGGTGAGAATTACA+TGG - chr1.2:67603841-67603860 MS.gene005718:intron 45.0%
TTCCATCATGTCAGGTCTTG+CGG - chr1.2:67605186-67605205 MS.gene005718:CDS 45.0%
TTCCCCCATGTTCACTAAGA+AGG + chr1.2:67605086-67605105 None:intergenic 45.0%
!! ATACGTTGGTGCTGTAAAGG+AGG - chr1.2:67603549-67603568 MS.gene005718:intron 45.0%
!! ATGATGTGGTGCGTTTTGGT+TGG + chr1.2:67603208-67603227 None:intergenic 45.0%
!! ATGATGTGTCGCGTTTTGGT+TGG - chr1.2:67603704-67603723 MS.gene005718:intron 45.0%
!! TTGAAGGAATAAGAGCACCC+TGG - chr1.2:67605329-67605348 MS.gene005718:CDS 45.0%
AATCTCTGGCAGTATGGCTC+AGG - chr1.2:67603827-67603846 MS.gene005718:intron 50.0%
AGGCTGAATCACCTAGACCA+GGG + chr1.2:67604361-67604380 None:intergenic 50.0%
ATACAACAGAGTGGCCGACT+AGG + chr1.2:67604314-67604333 None:intergenic 50.0%
ATTGGCAAGGCTGTTGTTGG+TGG - chr1.2:67603804-67603823 MS.gene005718:intron 50.0%
CCAACCGGTGCATTTCGAAT+AGG - chr1.2:67603007-67603026 MS.gene005718:CDS 50.0%
CCAGTTCTCATCCTTGTCCA+TGG + chr1.2:67603496-67603515 None:intergenic 50.0%
CCATGGACAAGGATGAGAAC+TGG - chr1.2:67603493-67603512 MS.gene005718:intron 50.0%
CTCACCTTGACAAGATCAGC+CGG + chr1.2:67604926-67604945 None:intergenic 50.0%
CTCTCATCAACTCGTCCAAC+CGG - chr1.2:67602992-67603011 MS.gene005718:CDS 50.0%
GCCTTGCCAATAATAGAGGG+TGG + chr1.2:67603795-67603814 None:intergenic 50.0%
GGAAAGGATTCTTCCCCACA+TGG - chr1.2:67605350-67605369 MS.gene005718:CDS 50.0%
GGTTGGAGAACAGTACCAAC+AGG - chr1.2:67603721-67603740 MS.gene005718:intron 50.0%
GGTTGGAGAACAGTACCAAC+AGG + chr1.2:67603740-67603721 None:intergenic 50.0%
GTCCGTGGCAATTTGTGTTC+TGG - chr1.2:67605383-67605402 MS.gene005718:CDS 50.0%
GTGGGGAAGAATCCTTTCCA+GGG + chr1.2:67605349-67605368 None:intergenic 50.0%
TAGGCTGAATCACCTAGACC+AGG + chr1.2:67604362-67604381 None:intergenic 50.0%
TCAAATGGCCCTGAATACCG+AGG + chr1.2:67604989-67605008 None:intergenic 50.0%
TCACCTTGACAAGATCAGCC+GGG + chr1.2:67604925-67604944 None:intergenic 50.0%
TGGTGGAATCTCTGGCAGTA+TGG - chr1.2:67603821-67603840 MS.gene005718:intron 50.0%
TGTGGGGAAGAATCCTTTCC+AGG + chr1.2:67605350-67605369 None:intergenic 50.0%
TTGATGAGAGTGACTCCCCA+TGG + chr1.2:67602982-67603001 None:intergenic 50.0%
TTGTTGGGTATGAGCACCTC+AGG - chr1.2:67603122-67603141 MS.gene005718:CDS 50.0%
! CCTATTCGAAATGCACCGGT+TGG + chr1.2:67603010-67603029 None:intergenic 50.0%
! GCTGTTGTTGGTGGAATCTC+TGG - chr1.2:67603813-67603832 MS.gene005718:intron 50.0%
!! ACTAGTGGGGTTAGCCTAGT+CGG - chr1.2:67604297-67604316 MS.gene005718:intron 50.0%
!! GGAATAAGAGCACCCTGGAA+AGG - chr1.2:67605334-67605353 MS.gene005718:CDS 50.0%
AAGCCCGGCTGATCTTGTCA+AGG - chr1.2:67604919-67604938 MS.gene005718:intron 55.0%
CCAAGATTCAGGCTTGAGCC+TGG - chr1.2:67604031-67604050 MS.gene005718:intron 55.0%
CCAGGCTCAAGCCTGAATCT+TGG + chr1.2:67604034-67604053 None:intergenic 55.0%
CGGCTGATCTTGTCAAGGTG+AGG - chr1.2:67604924-67604943 MS.gene005718:intron 55.0%
CTTGTCTTGGTCCCTGGTCT+AGG - chr1.2:67604347-67604366 MS.gene005718:intron 55.0%
GATTCTTCCCCACATGGGCA+AGG - chr1.2:67605356-67605375 MS.gene005718:CDS 55.0%
GGCTGGCAGCGATGTGTTAA+TGG - chr1.2:67603615-67603634 MS.gene005718:intron 55.0%
GTCTGTCTTGTCTTGGTCCC+TGG - chr1.2:67604341-67604360 MS.gene005718:intron 55.0%
TATCTTCGACAGTGGCAGGC+TGG - chr1.2:67603598-67603617 MS.gene005718:intron 55.0%
TGCCGCAAGACCTGACATGA+TGG + chr1.2:67605191-67605210 None:intergenic 55.0%
!! CTAGTCTTGACAACGTCGGC+TGG + chr1.2:67605229-67605248 None:intergenic 55.0%
GACCAAGCCTTGCCCATGTG+GGG + chr1.2:67605366-67605385 None:intergenic 60.0%
GGACCAAGCCTTGCCCATGT+GGG + chr1.2:67605367-67605386 None:intergenic 60.0%
TCTCACACCTGGTCTCAGGC+TGG - chr1.2:67604614-67604633 MS.gene005718:intron 60.0%
TTCCCCACATGGGCAAGGCT+TGG - chr1.2:67605361-67605380 MS.gene005718:CDS 60.0%
CACCTCTCCAGCCTGAGACC+AGG + chr1.2:67604624-67604643 None:intergenic 65.0%
CACCTGGTCTCAGGCTGGAG+AGG - chr1.2:67604619-67604638 MS.gene005718:intron 65.0%
CGGACCAAGCCTTGCCCATG+TGG + chr1.2:67605368-67605387 None:intergenic 65.0%
CTGGTCTCAGGCTGGAGAGG+TGG - chr1.2:67604622-67604641 MS.gene005718:intron 65.0%
! CATGGGCAAGGCTTGGTCCG+TGG - chr1.2:67605368-67605387 MS.gene005718:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 67602851 67605453 67602851 ID=MS.gene005718
chr1.2 mRNA 67602851 67605453 67602851 ID=MS.gene005718.t1;Parent=MS.gene005718
chr1.2 exon 67605176 67605453 67605176 ID=MS.gene005718.t1.exon1;Parent=MS.gene005718.t1
chr1.2 CDS 67605176 67605453 67605176 ID=cds.MS.gene005718.t1;Parent=MS.gene005718.t1
chr1.2 exon 67604456 67604570 67604456 ID=MS.gene005718.t1.exon2;Parent=MS.gene005718.t1
chr1.2 CDS 67604456 67604570 67604456 ID=cds.MS.gene005718.t1;Parent=MS.gene005718.t1
chr1.2 exon 67602851 67603393 67602851 ID=MS.gene005718.t1.exon3;Parent=MS.gene005718.t1
chr1.2 CDS 67602851 67603393 67602851 ID=cds.MS.gene005718.t1;Parent=MS.gene005718.t1
Gene Sequence

>MS.gene005718

ATGAAATCAGGCAATCAACAGGGTGGAGTTGACAATACTCATACAAAGATTTTACTAACATCATTATCGGCAATGGTGGCCGAGTCCACAACTTTCCCCATAGACTTGATCAAAACTAGGCTTCAACTCCATGGGGAGTCACTCTCATCAACTCGTCCAACCGGTGCATTTCGAATAGGCGTAGACATTATTCGTGAACAAGGTCCTCTTGGTCTTTATAAGGGCTTGTCTCCAGCAATTCTTAGACACCTGTTCTACACACCTATTCGAATTGTTGGGTATGAGCACCTCAGGAGTGTTATTTCTTCGGACAAAACTTAGAAACAGTACCATACATCCTGTTGGTACTGTTCTCCAACCAAAACGCACCACATCATTAATTTATCCACATCAGCTATTAACAAATTAACGCCGTTTCCTTCCTCTTTCTTTTATCGTCTTCTTTAATCAGTTATGGAACCAAAACTGACCCTTTTGAATGTCAAGGAAATTCATCTAATCTCTCTTTTAAGTTTGGCATCAAACATATAATGATACTAAAAGTAAATAGAAGACCAACAAGGTCTTCCATGAAATGTTTTTTTTTTAGTAAAACGATGGAAGCCATTAACAATAAATTGCCTACATGGAACATGTTTAAAACCATGGACAAGGATGAGAACTGGAACATGTTTAAAACCATGGACAAGGATGAGAACATACGTTGGTGCTGTAAAGGAGGTTGCAGAAAATTAGCAAGGGGAAAAATATCTTCGACAGTGGCAGGCTGGCAGCGATGTGTTAATGGTTGAAGAGAAACAGGTCAACGTTTGCTTGCGGTGTTAATTTGTTATCGGATGATGTGGACAAAATAATGATGTGTCGCGTTTTGGTTGGAGAACAGTACCAACAGGATGTATGGTACTGTTTCTAAGTTTTGTCCTATTTCTTCCGATAATGGACCACCCTCTATTATTGGCAAGGCTGTTGTTGGTGGAATCTCTGGCAGTATGGCTCAGGTGAGAATTACATGGTCTGAAATGTGTTGTGTTGTATAGTTAATATTTGTGCAGAATTCTTGTCAATTTAGTCATTTCTCATAGTAAGTAAATAATTCAGATTTGTAATTGAAATTTTTCTATATCTTTTTATTTGAAAATGCTGAGCATCAAGATTATTATATATTTAAAGGATAAAAGTTCCAAGATTCAGGCTTGAGCCTGGACCAAAAAATAGTTAAGTTACAGTCTCTTCATTTGAATTCTGTTGTTAAGACTTAAGAGTTTCAAGAACATAATTTTATGCCTTCCAACTTCAAAGAACACCATCTGCCGGATTTATGAACATAGTAAAAGAATATGTGGTGTTTGTACATCAATTATCTGTTTTATACAATTGATTGATTGATTCAGTATTAGGTAGGTATATCACGACTTTTGTGTTTTTCGACTGATGTTTATCTTAGTTACTAGTGGGGTTAGCCTAGTCGGCCACTCTGTTGTATACATAACGTCTGTCTTGTCTTGGTCCCTGGTCTAGGTGATTCAGCCTATGTGAGAGCTTTGCACATGTTTCTGGATTGCCTTTTGTTATAAAATTCTGATTCTGACACTCCCTTAAGCATAAGCTTTACTAAGTTTTAACCTTGTTACAATTAGCCACCCACAAATGTTAGACAAACAATACAACCAATCTCAACCAAAGAACTTAGGAAACTAAAATCCTTTAAAAAGGTGTAGGCATGTAGTGACTCGTGTATTTCGTTTCTGGAGAATCTTTGAAAATCTCACACCTGGTCTCAGGCTGGAGAGGTGGAAATAAAATATTAGGATTATGGTTTCATCAGTTAGAAGCAAAAGTAGCCATGAGATGCTAATAGTTAAACAAGAGATCAAAGAAAAATGAAGAAATATCTGCTGACCATTGTGATAAAATCATAAAATGCAATTTTACAAGAATATAATTTCCAATGCACTGTAACTTTGGAGACGAATCCATGTTTTAACCGACTGATCACCTTTATATTTGTCCTTGGAAAATTACAGATTTATATTTTTTATTATTTACAATTAGTAGTACAGGTTATAGCAAGCCCGGCTGATCTTGTCAAGGTGAGGATGCAAGCTGATAGTCAAATGATGAGAAAAGGTATTCAACCTCGGTATTCAGGGCCATTTGATGCTTTTAACAAAATCATTAAAGCTGAAGGATTTCAAGGACTGTGGAAGGGTGTTTTTCCTAATATCCAAAGAGCCTTCTTAGTGAACATGGGGGAATTAGCCTGTTATGATCACGCTAAACAATTTGTTATTAAAAGTAAGATAGCTGAGGATAACGTTTATGCCCACACATTAGCTTCCATCATGTCAGGTCTTGCGGCAACTTCTTTAAGTTGTCCAGCCGACGTTGTCAAGACTAGAATGATGAATCAGGCAGCTAAAAAGGAAGGGAATGTCTTATATAGAAGCTCTTATGATTGCTTGGTGAAGACTGTTAAAGTTGAAGGAATAAGAGCACCCTGGAAAGGATTCTTCCCCACATGGGCAAGGCTTGGTCCGTGGCAATTTGTGTTCTGGGTTTCCTACGAGAAGTTTAGAAAATTTGCTGGGCTCTCTTCTTTCTAG
Protein sequence

>MS.gene005718.t1

MKSGNQQGGVDNTHTKILLTSLSAMVAESTTFPIDLIKTRLQLHGESLSSTRPTGAFRIGVDIIREQGPLGLYKGLSPAILRHLFYTPIRIVGTNRMYGTVSKFCPISSDNGPPSIIGKAVVGGISGSMAQVIASPADLVKVRMQADSQMMRKGIQPRYSGPFDAFNKIIKAEGFQGLWKGVFPNIQRAFLVNMGELACYDHAKQFVIKSKIAEDNVYAHTLASIMSGLAATSLSCPADVVKTRMMNQAAKKEGNVLYRSSYDCLVKTVKVEGIRAPWKGFFPTWARLGPWQFVFWVSYEKFRKFAGLSSF