Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09068.t1 | XP_003629745.1 | 99 | 301 | 3 | 0 | 1 | 301 | 1 | 301 | 7.30E-168 | 599.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09068.t1 | Q9C5M0 | 83.2 | 298 | 48 | 1 | 4 | 301 | 3 | 298 | 2.4e-143 | 509.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09068.t1 | G7LIP6 | 99.0 | 301 | 3 | 0 | 1 | 301 | 1 | 301 | 5.2e-168 | 599.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055634 | MS.gene09068 | 0.834252 | 3.34E-56 | -1.69E-46 |
| MS.gene056898 | MS.gene09068 | 0.81195 | 5.42E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005651 | MS.gene09068 | PPI |
| MS.gene09068 | MS.gene010661 | PPI |
| MS.gene44265 | MS.gene09068 | PPI |
| MS.gene49818 | MS.gene09068 | PPI |
| MS.gene09068 | MS.gene07162 | PPI |
| MS.gene048336 | MS.gene09068 | PPI |
| MS.gene027755 | MS.gene09068 | PPI |
| MS.gene09068 | MS.gene99446 | PPI |
| MS.gene86246 | MS.gene09068 | PPI |
| MS.gene87922 | MS.gene09068 | PPI |
| MS.gene21371 | MS.gene09068 | PPI |
| MS.gene065200 | MS.gene09068 | PPI |
| MS.gene20684 | MS.gene09068 | PPI |
| MS.gene73296 | MS.gene09068 | PPI |
| MS.gene21596 | MS.gene09068 | PPI |
| MS.gene005718 | MS.gene09068 | PPI |
| MS.gene90775 | MS.gene09068 | PPI |
| MS.gene008904 | MS.gene09068 | PPI |
| MS.gene84655 | MS.gene09068 | PPI |
| MS.gene037607 | MS.gene09068 | PPI |
| MS.gene001110 | MS.gene09068 | PPI |
| MS.gene47310 | MS.gene09068 | PPI |
| MS.gene29137 | MS.gene09068 | PPI |
| MS.gene03010 | MS.gene09068 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09068.t1 | MTR_8g086070 | 99.003 | 301 | 3 | 0 | 1 | 301 | 1 | 301 | 0.0 | 612 |
| MS.gene09068.t1 | MTR_8g086070 | 99.052 | 211 | 2 | 0 | 1 | 211 | 1 | 211 | 1.92e-151 | 422 |
| MS.gene09068.t1 | MTR_5g032420 | 37.963 | 324 | 155 | 4 | 18 | 299 | 3 | 322 | 4.41e-64 | 204 |
| MS.gene09068.t1 | MTR_8g068890 | 39.062 | 320 | 150 | 6 | 18 | 299 | 3 | 315 | 2.40e-61 | 197 |
| MS.gene09068.t1 | MTR_3g100570 | 37.421 | 318 | 156 | 6 | 18 | 299 | 3 | 313 | 1.19e-60 | 196 |
| MS.gene09068.t1 | MTR_7g066690 | 33.000 | 300 | 166 | 6 | 21 | 297 | 13 | 300 | 2.02e-40 | 143 |
| MS.gene09068.t1 | MTR_7g066690 | 25.128 | 195 | 125 | 4 | 16 | 199 | 116 | 300 | 2.29e-11 | 63.9 |
| MS.gene09068.t1 | MTR_4g018750 | 32.441 | 299 | 178 | 5 | 14 | 298 | 11 | 299 | 9.24e-40 | 141 |
| MS.gene09068.t1 | MTR_1g090330 | 33.333 | 279 | 174 | 5 | 27 | 295 | 20 | 296 | 1.18e-39 | 140 |
| MS.gene09068.t1 | MTR_8g086120 | 59.016 | 122 | 45 | 2 | 162 | 283 | 9 | 125 | 1.56e-39 | 137 |
| MS.gene09068.t1 | MTR_4g018750 | 31.293 | 294 | 170 | 8 | 14 | 291 | 11 | 288 | 1.03e-33 | 125 |
| MS.gene09068.t1 | MTR_8g086430 | 55.435 | 92 | 40 | 1 | 207 | 298 | 1 | 91 | 4.18e-28 | 106 |
| MS.gene09068.t1 | MTR_1g088995 | 28.920 | 287 | 179 | 8 | 21 | 295 | 33 | 306 | 9.05e-27 | 107 |
| MS.gene09068.t1 | MTR_3g462140 | 28.417 | 278 | 176 | 4 | 33 | 295 | 28 | 297 | 1.73e-24 | 100 |
| MS.gene09068.t1 | MTR_3g462140 | 28.409 | 176 | 107 | 4 | 34 | 199 | 133 | 299 | 7.03e-13 | 68.2 |
| MS.gene09068.t1 | MTR_8g086420 | 75.000 | 56 | 14 | 0 | 207 | 262 | 1 | 56 | 6.13e-22 | 87.4 |
| MS.gene09068.t1 | MTR_4g057850 | 26.936 | 297 | 199 | 10 | 17 | 299 | 15 | 307 | 4.95e-20 | 88.6 |
| MS.gene09068.t1 | MTR_4g012850 | 26.718 | 262 | 175 | 6 | 14 | 263 | 3 | 259 | 5.67e-20 | 88.6 |
| MS.gene09068.t1 | MTR_8g086160 | 54.667 | 75 | 26 | 2 | 216 | 289 | 32 | 99 | 5.75e-20 | 83.6 |
| MS.gene09068.t1 | MTR_1g088995 | 30.457 | 197 | 114 | 6 | 21 | 206 | 33 | 217 | 8.12e-15 | 72.8 |
| MS.gene09068.t1 | MTR_7g109135 | 22.819 | 298 | 197 | 8 | 23 | 299 | 24 | 309 | 2.62e-14 | 72.4 |
| MS.gene09068.t1 | MTR_7g084400 | 24.913 | 289 | 184 | 7 | 21 | 294 | 213 | 483 | 4.45e-14 | 72.8 |
| MS.gene09068.t1 | MTR_8g086080 | 39.796 | 98 | 49 | 2 | 190 | 285 | 63 | 152 | 2.53e-13 | 67.4 |
| MS.gene09068.t1 | MTR_2g102010 | 27.143 | 280 | 184 | 8 | 19 | 288 | 15 | 284 | 4.26e-13 | 68.9 |
| MS.gene09068.t1 | MTR_7g109135 | 22.789 | 294 | 195 | 8 | 23 | 299 | 24 | 302 | 4.89e-13 | 68.9 |
| MS.gene09068.t1 | MTR_3g098460 | 32.934 | 167 | 98 | 6 | 24 | 181 | 302 | 463 | 9.09e-13 | 68.6 |
| MS.gene09068.t1 | MTR_3g098460 | 23.592 | 284 | 201 | 8 | 19 | 294 | 203 | 478 | 1.10e-12 | 68.6 |
| MS.gene09068.t1 | MTR_6g034515 | 26.108 | 203 | 131 | 4 | 20 | 210 | 159 | 354 | 1.22e-12 | 67.8 |
| MS.gene09068.t1 | MTR_5g009500 | 21.104 | 308 | 212 | 5 | 8 | 287 | 25 | 329 | 7.53e-12 | 65.5 |
| MS.gene09068.t1 | MTR_8g098240 | 26.455 | 189 | 120 | 6 | 22 | 204 | 414 | 589 | 2.49e-11 | 64.7 |
| MS.gene09068.t1 | MTR_1g087840 | 24.555 | 281 | 177 | 11 | 37 | 295 | 35 | 302 | 4.51e-11 | 62.8 |
| MS.gene09068.t1 | MTR_3g107510 | 25.926 | 162 | 114 | 2 | 21 | 179 | 216 | 374 | 6.81e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09068.t1 | AT5G19760 | 83.056 | 301 | 48 | 2 | 1 | 301 | 1 | 298 | 0.0 | 524 |
| MS.gene09068.t1 | AT4G24570 | 38.871 | 319 | 150 | 7 | 18 | 299 | 3 | 313 | 4.41e-63 | 202 |
| MS.gene09068.t1 | AT2G22500 | 38.291 | 316 | 154 | 7 | 18 | 299 | 3 | 311 | 1.91e-56 | 185 |
| MS.gene09068.t1 | AT5G09470 | 37.591 | 274 | 157 | 5 | 33 | 298 | 67 | 334 | 1.34e-48 | 165 |
| MS.gene09068.t1 | AT1G14140 | 35.034 | 294 | 172 | 7 | 16 | 295 | 11 | 299 | 2.66e-41 | 145 |
| MS.gene09068.t1 | AT5G58970 | 30.976 | 297 | 174 | 5 | 18 | 295 | 13 | 297 | 5.21e-40 | 142 |
| MS.gene09068.t1 | AT5G58970 | 26.596 | 188 | 107 | 5 | 27 | 198 | 126 | 298 | 9.72e-12 | 65.1 |
| MS.gene09068.t1 | AT3G54110 | 34.420 | 276 | 161 | 6 | 32 | 294 | 27 | 295 | 1.04e-39 | 141 |
| MS.gene09068.t1 | AT4G03115 | 30.492 | 305 | 188 | 10 | 2 | 295 | 17 | 308 | 1.20e-31 | 120 |
| MS.gene09068.t1 | AT5G58970 | 31.120 | 241 | 142 | 4 | 18 | 239 | 13 | 248 | 1.50e-31 | 119 |
| MS.gene09068.t1 | AT4G03115 | 30.492 | 305 | 188 | 10 | 2 | 295 | 49 | 340 | 2.14e-31 | 120 |
| MS.gene09068.t1 | AT4G03115 | 29.707 | 239 | 153 | 6 | 59 | 295 | 12 | 237 | 5.67e-25 | 100 |
| MS.gene09068.t1 | AT4G03115 | 29.707 | 239 | 153 | 6 | 59 | 295 | 20 | 245 | 7.58e-25 | 100 |
| MS.gene09068.t1 | AT5G01340 | 27.817 | 284 | 192 | 7 | 22 | 295 | 18 | 298 | 1.81e-22 | 95.5 |
| MS.gene09068.t1 | AT4G03115 | 32.558 | 215 | 123 | 8 | 2 | 206 | 17 | 219 | 3.20e-19 | 84.7 |
| MS.gene09068.t1 | AT4G03115 | 32.558 | 215 | 123 | 8 | 2 | 206 | 17 | 219 | 3.33e-19 | 84.7 |
| MS.gene09068.t1 | AT4G32400 | 21.951 | 287 | 206 | 7 | 16 | 295 | 109 | 384 | 9.45e-15 | 74.3 |
| MS.gene09068.t1 | AT5G51050 | 30.526 | 190 | 107 | 6 | 1 | 181 | 305 | 478 | 3.81e-13 | 70.1 |
| MS.gene09068.t1 | AT5G07320 | 30.120 | 166 | 99 | 6 | 24 | 181 | 303 | 459 | 6.55e-13 | 69.3 |
| MS.gene09068.t1 | AT5G46800 | 28.873 | 284 | 174 | 8 | 19 | 280 | 6 | 283 | 1.15e-12 | 67.8 |
| MS.gene09068.t1 | AT5G46800 | 28.873 | 284 | 174 | 8 | 19 | 280 | 6 | 283 | 1.15e-12 | 67.8 |
| MS.gene09068.t1 | AT5G46800 | 28.873 | 284 | 174 | 8 | 19 | 280 | 6 | 283 | 1.15e-12 | 67.8 |
| MS.gene09068.t1 | AT5G42130 | 26.316 | 171 | 121 | 3 | 15 | 180 | 205 | 375 | 5.52e-11 | 63.2 |
Find 89 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTGTTGCTGCTGGTTTC+TGG | 0.111154 | 4.4:-13989826 | MS.gene09068:CDS |
| CCTCAACCAGCTCCAGAAAT+TGG | 0.196597 | 4.4:-13985656 | MS.gene09068:CDS |
| GGAGAAAAGTTATGGGTTAT+AGG | 0.255079 | 4.4:-13985635 | None:intergenic |
| TTCGTCAATGGTGGTGCTTC+TGG | 0.275917 | 4.4:-13989788 | MS.gene09068:CDS |
| TTAGGTGCAAGTAGTGTATC+TGG | 0.278521 | 4.4:-13986000 | MS.gene09068:intron |
| CAGAAATTGGAGAAAAGTTA+TGG | 0.301655 | 4.4:-13985643 | MS.gene09068:CDS |
| TTCTTGCAGGGTCTATCAGC+TGG | 0.316238 | 4.4:-13989231 | MS.gene09068:intron |
| AGTTGGTAGTCCAGCTGATT+TGG | 0.324876 | 4.4:-13988764 | MS.gene09068:CDS |
| CTTTCACTGTGGAAAGGTGC+TGG | 0.335848 | 4.4:-13988637 | MS.gene09068:CDS |
| GGGCTGACTGCTGGTGCAAT+TGG | 0.358637 | 4.4:-13988793 | MS.gene09068:CDS |
| AAACTACACAAACGCCTTCC+AGG | 0.363434 | 4.4:-13988692 | MS.gene09068:CDS |
| GGGTGTTGGTGCTTTCTATA+AGG | 0.363669 | 4.4:-13989551 | MS.gene09068:intron |
| CTGCACGCCTTGGAACATTT+AGG | 0.364412 | 4.4:-13989182 | MS.gene09068:intron |
| TGGCAGGGGCTTGCCATCAT+TGG | 0.380343 | 4.4:+13988837 | None:intergenic |
| GGAAGGCGTTTGTGTAGTTT+CGG | 0.380503 | 4.4:+13988695 | None:intergenic |
| CCAATTTCTGGAGCTGGTTG+AGG | 0.389193 | 4.4:+13985656 | None:intergenic |
| AATTCAGGTTAGGATTCAAC+TGG | 0.396885 | 4.4:-13989620 | MS.gene09068:intron |
| GAAGGGTCCTCCAGATTTGA+AGG | 0.417928 | 4.4:+13985858 | None:intergenic |
| AGAAATTGGAGAAAAGTTAT+GGG | 0.426080 | 4.4:-13985642 | MS.gene09068:CDS |
| ACCATTGACGAAAGGCTTGA+TGG | 0.428395 | 4.4:+13989799 | None:intergenic |
| GCTGTCAAGACCTTCAAATC+TGG | 0.432966 | 4.4:-13985868 | MS.gene09068:CDS |
| CAGTCAAGAGAGCCGGTGTA+TGG | 0.437255 | 4.4:+13985892 | None:intergenic |
| GGCCAGAAACCAGCAGCAAC+AGG | 0.443267 | 4.4:+13989824 | None:intergenic |
| CATACCTTGATCATATCAAT+AGG | 0.451587 | 4.4:+13989740 | None:intergenic |
| TGAGTCTTCACATAATCAAA+TGG | 0.453835 | 4.4:+13985952 | None:intergenic |
| TACCGTATCGGTGCAGATGA+AGG | 0.455491 | 4.4:-13988664 | MS.gene09068:CDS |
| ACCATCAAGCCTTTCGTCAA+TGG | 0.457555 | 4.4:-13989800 | MS.gene09068:CDS |
| CACCGATACGGTAAAGTGCC+TGG | 0.473291 | 4.4:+13988674 | None:intergenic |
| TCAAAGTGTTGAGTTCTTCA+AGG | 0.476440 | 4.4:-13988560 | MS.gene09068:CDS |
| TTCAAGGATACCGTTGGTCT+AGG | 0.476717 | 4.4:-13988544 | MS.gene09068:CDS |
| GTCTATCAGCTGGGTTACTC+AGG | 0.478134 | 4.4:-13989221 | MS.gene09068:CDS |
| GATTCCCTGTCTACTGTGTC+AGG | 0.479793 | 4.4:-13985822 | MS.gene09068:CDS |
| TTTCACTGTGGAAAGGTGCT+GGG | 0.480851 | 4.4:-13988636 | MS.gene09068:CDS |
| TCAACCTATTGATATGATCA+AGG | 0.487786 | 4.4:-13989744 | MS.gene09068:intron |
| AAGCCTAAGCCTGTTGCTGC+TGG | 0.491227 | 4.4:-13989833 | MS.gene09068:CDS |
| TTCTACCATGCTTAAGAATG+AGG | 0.497892 | 4.4:-13989572 | MS.gene09068:CDS |
| CTTGACAAATAAAGCAATTG+AGG | 0.499499 | 4.4:-13988860 | MS.gene09068:CDS |
| ACTTACACCACTGCACGCCT+TGG | 0.499902 | 4.4:-13989192 | MS.gene09068:CDS |
| TTTGGCACTCATTCGTATGC+AGG | 0.500271 | 4.4:-13988746 | MS.gene09068:CDS |
| GACACAGTAGACAGGGAATC+CGG | 0.501193 | 4.4:+13985825 | None:intergenic |
| AAGAGCCATGGCATTGAACA+TGG | 0.503929 | 4.4:-13988602 | MS.gene09068:CDS |
| GAATCCGGTGTAAAATTTGA+AGG | 0.507310 | 4.4:+13985840 | None:intergenic |
| GCAATCCTGACACAGTAGAC+AGG | 0.508794 | 4.4:+13985817 | None:intergenic |
| ATCAGCTGGGTTACTCAGGC+AGG | 0.514032 | 4.4:-13989217 | MS.gene09068:CDS |
| GCTCTATGTGGGCTGACTGC+TGG | 0.520808 | 4.4:-13988802 | MS.gene09068:CDS |
| CGAATGAGTGCCAAATCAGC+TGG | 0.523817 | 4.4:+13988754 | None:intergenic |
| AAAGCAATTGAGGCCAATGA+TGG | 0.524756 | 4.4:-13988850 | MS.gene09068:CDS |
| TTCCAGGCACTTTACCGTAT+CGG | 0.534625 | 4.4:-13988676 | MS.gene09068:CDS |
| TCTTGCAGGGTCTATCAGCT+GGG | 0.537823 | 4.4:-13989230 | MS.gene09068:intron |
| CAGGATTGCTCCCCATGTCA+TGG | 0.543518 | 4.4:-13985803 | MS.gene09068:intron |
| TCCCTTCATCTGCACCGATA+CGG | 0.543890 | 4.4:+13988662 | None:intergenic |
| ACCGTATCGGTGCAGATGAA+GGG | 0.548027 | 4.4:-13988663 | MS.gene09068:CDS |
| AAACCAGCAGCAACAGGCTT+AGG | 0.550180 | 4.4:+13989830 | None:intergenic |
| TTGACGAAAGGCTTGATGGT+TGG | 0.552826 | 4.4:+13989803 | None:intergenic |
| CATCCCCATGTTCAATGCCA+TGG | 0.555090 | 4.4:+13988597 | None:intergenic |
| ACTGCTTATGGCAGATGACA+TGG | 0.559975 | 4.4:-13985684 | MS.gene09068:intron |
| GTTAGGATTCAACTGGGTCA+AGG | 0.566704 | 4.4:-13989613 | MS.gene09068:CDS |
| GAGTTCTTCAAGGATACCGT+TGG | 0.572249 | 4.4:-13988550 | MS.gene09068:CDS |
| GACAGCACAGTCAAGAGAGC+CGG | 0.574269 | 4.4:+13985885 | None:intergenic |
| AAAGATGCAACCTGATGCTG+AGG | 0.582204 | 4.4:-13985923 | MS.gene09068:CDS |
| TAGTTTCGGCGCTGAGCAAG+AGG | 0.584237 | 4.4:+13988709 | None:intergenic |
| ATCAATAGGTTGAATAACAC+AGG | 0.588855 | 4.4:+13989754 | None:intergenic |
| GGGATTCTTTCACTGTGGAA+AGG | 0.593663 | 4.4:-13988643 | MS.gene09068:CDS |
| AACACCCTCATTCTTAAGCA+TGG | 0.601421 | 4.4:+13989567 | None:intergenic |
| GTCAAGACCTTCAAATCTGG+AGG | 0.605904 | 4.4:-13985865 | MS.gene09068:CDS |
| AAGAGAATAGTACCATGACA+TGG | 0.606457 | 4.4:+13985791 | None:intergenic |
| AGAGCCATGGCATTGAACAT+GGG | 0.610100 | 4.4:-13988601 | MS.gene09068:CDS |
| AAATGTTCCAAGGCGTGCAG+TGG | 0.610327 | 4.4:+13989185 | None:intergenic |
| GAGCCATGGCATTGAACATG+GGG | 0.612866 | 4.4:-13988600 | MS.gene09068:CDS |
| ATCAAGCCTTTCGTCAATGG+TGG | 0.613468 | 4.4:-13989797 | MS.gene09068:CDS |
| AGAGAATAGTACCATGACAT+GGG | 0.614065 | 4.4:+13985792 | None:intergenic |
| TCTACCATGCTTAAGAATGA+GGG | 0.614254 | 4.4:-13989571 | MS.gene09068:CDS |
| AATCCGGTGTAAAATTTGAA+GGG | 0.616204 | 4.4:+13985841 | None:intergenic |
| CAATCCTGACACAGTAGACA+GGG | 0.622100 | 4.4:+13985818 | None:intergenic |
| CAACTCACCTAAATGTTCCA+AGG | 0.622902 | 4.4:+13989175 | None:intergenic |
| ATGAAGGGATTCTTTCACTG+TGG | 0.628478 | 4.4:-13988648 | MS.gene09068:CDS |
| GGTGAAATGACTACTGTGGT+TGG | 0.629754 | 4.4:-13988523 | MS.gene09068:intron |
| GATACGGTAAAGTGCCTGGA+AGG | 0.630447 | 4.4:+13988678 | None:intergenic |
| GCCATGGCTCTTACTACAGT+AGG | 0.638558 | 4.4:+13988613 | None:intergenic |
| GCCTACTGTAGTAAGAGCCA+TGG | 0.642788 | 4.4:-13988614 | MS.gene09068:CDS |
| GGTGCAATTGGAGCAACAGT+TGG | 0.654003 | 4.4:-13988781 | MS.gene09068:CDS |
| GAAGCACCACCATTGACGAA+AGG | 0.656464 | 4.4:+13989791 | None:intergenic |
| ATTCAGGTTAGGATTCAACT+GGG | 0.656898 | 4.4:-13989619 | MS.gene09068:intron |
| GAGGGAAAATATCCATACAC+CGG | 0.660454 | 4.4:-13985904 | MS.gene09068:CDS |
| AGTCATTTCACCTAGACCAA+CGG | 0.665426 | 4.4:+13988534 | None:intergenic |
| ATGCTTAAGAATGAGGGTGT+TGG | 0.674370 | 4.4:-13989565 | MS.gene09068:CDS |
| GAGAATAGTACCATGACATG+GGG | 0.680357 | 4.4:+13985793 | None:intergenic |
| AAGATGCAACCTGATGCTGA+GGG | 0.680874 | 4.4:-13985922 | MS.gene09068:CDS |
| TCTAGGTGAAATGACTACTG+TGG | 0.723327 | 4.4:-13988527 | MS.gene09068:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAAAAAAAAGAT+AGG | + | chr4.4:13988818-13988837 | None:intergenic | 10.0% |
| !!! | ATAAATTCATTTTTTTTAAC+TGG | - | chr4.4:13988625-13988644 | MS.gene09068:CDS | 10.0% |
| !!! | ATTTATTCTTTTATAAAAAG+GGG | + | chr4.4:13987120-13987139 | None:intergenic | 10.0% |
| !!! | TAAATTCATTTTTTTTAACT+GGG | - | chr4.4:13988626-13988645 | MS.gene09068:CDS | 10.0% |
| !!! | TTTTTTTATATTGTTTACTT+TGG | - | chr4.4:13986144-13986163 | MS.gene09068:intron | 10.0% |
| !! | TTCTGTTATCTATTAAAAAA+AGG | + | chr4.4:13987607-13987626 | None:intergenic | 15.0% |
| !!! | AATTAGTCAAACTTTTTATT+AGG | - | chr4.4:13987137-13987156 | MS.gene09068:intron | 15.0% |
| !!! | TTAATTTCAATTTTGTAACT+TGG | - | chr4.4:13988222-13988241 | MS.gene09068:intron | 15.0% |
| !!! | TTTTTGCAGTATAATAAAAA+GGG | + | chr4.4:13989427-13989446 | None:intergenic | 15.0% |
| !!! | TTTTTTGCAGTATAATAAAA+AGG | + | chr4.4:13989428-13989447 | None:intergenic | 15.0% |
| !! | AAACTAACAACAGTATATTA+TGG | - | chr4.4:13987368-13987387 | MS.gene09068:intron | 20.0% |
| !! | AAATCTAATATTGGATGATA+AGG | - | chr4.4:13987534-13987553 | MS.gene09068:intron | 20.0% |
| !! | AACTAACAACAGTATATTAT+GGG | - | chr4.4:13987369-13987388 | MS.gene09068:intron | 20.0% |
| !! | AAGCTTAAATTAATCCAAAT+TGG | + | chr4.4:13988141-13988160 | None:intergenic | 20.0% |
| !! | AATCTAATATTGGATGATAA+GGG | - | chr4.4:13987535-13987554 | MS.gene09068:intron | 20.0% |
| !! | ATTGCAATATTCATCAAAAT+TGG | - | chr4.4:13986344-13986363 | MS.gene09068:intron | 20.0% |
| !! | ATTTATTGAGTCATTGTATT+TGG | - | chr4.4:13986174-13986193 | MS.gene09068:intron | 20.0% |
| !! | ATTTGATATGATGAATAAAG+GGG | + | chr4.4:13987693-13987712 | None:intergenic | 20.0% |
| !! | CATTTGATATGATGAATAAA+GGG | + | chr4.4:13987694-13987713 | None:intergenic | 20.0% |
| !! | GTGAAATTATAGTTTGATTA+AGG | + | chr4.4:13989025-13989044 | None:intergenic | 20.0% |
| !! | TAAAAACACAATGTAATTGT+AGG | + | chr4.4:13986450-13986469 | None:intergenic | 20.0% |
| !! | TATTGTATTTACTAGCTAAT+TGG | - | chr4.4:13987747-13987766 | MS.gene09068:intron | 20.0% |
| !!! | AAGGTTTTGAAATCTAATAT+TGG | - | chr4.4:13987525-13987544 | MS.gene09068:intron | 20.0% |
| !!! | ATAAAACATATCCTTTTGAA+TGG | + | chr4.4:13986495-13986514 | None:intergenic | 20.0% |
| !!! | ATCTAAGTGTAATTTGTTAA+GGG | + | chr4.4:13988677-13988696 | None:intergenic | 20.0% |
| !!! | ATTACCAATTTTCTTCTAAT+CGG | - | chr4.4:13989354-13989373 | MS.gene09068:intron | 20.0% |
| !!! | ATTGATTTTTTTATTGCCTT+TGG | - | chr4.4:13989719-13989738 | MS.gene09068:intron | 20.0% |
| !!! | TCTTTCATTTTTTGATGATT+TGG | - | chr4.4:13985785-13985804 | MS.gene09068:intron | 20.0% |
| !!! | TGTTTTTTTGTTTTGAATTC+AGG | - | chr4.4:13985849-13985868 | MS.gene09068:CDS | 20.0% |
| !!! | TTTTTGATGATTTGGTATTT+GGG | - | chr4.4:13985793-13985812 | MS.gene09068:intron | 20.0% |
| !!! | TTTTTTGATGATTTGGTATT+TGG | - | chr4.4:13985792-13985811 | MS.gene09068:intron | 20.0% |
| ! | AAATAGATACTATCTTGAGT+AGG | - | chr4.4:13988025-13988044 | MS.gene09068:intron | 25.0% |
| ! | AACAACCTAATAAACATTGA+TGG | - | chr4.4:13988885-13988904 | MS.gene09068:intron | 25.0% |
| ! | AAGATAATTGAAACAACATC+TGG | + | chr4.4:13985980-13985999 | None:intergenic | 25.0% |
| ! | AATAGATACTATCTTGAGTA+GGG | - | chr4.4:13988026-13988045 | MS.gene09068:intron | 25.0% |
| ! | ACTAACAACAGTATATTATG+GGG | - | chr4.4:13987370-13987389 | MS.gene09068:intron | 25.0% |
| ! | AGAAATCAGTCTTAATTACA+TGG | - | chr4.4:13988114-13988133 | MS.gene09068:intron | 25.0% |
| ! | AGAAATTGGAGAAAAGTTAT+GGG | - | chr4.4:13989842-13989861 | MS.gene09068:CDS | 25.0% |
| ! | AGACTCAATTTATACAAGAT+TGG | + | chr4.4:13988187-13988206 | None:intergenic | 25.0% |
| ! | ATATTCATCAAAATTGGATC+TGG | - | chr4.4:13986350-13986369 | MS.gene09068:intron | 25.0% |
| ! | ATGAGTCAACAATATCAAAA+TGG | + | chr4.4:13986994-13987013 | None:intergenic | 25.0% |
| ! | ATGATAGAAACAAAAACATG+TGG | + | chr4.4:13989160-13989179 | None:intergenic | 25.0% |
| ! | ATTAATGTACACAATCCAAA+TGG | + | chr4.4:13989392-13989411 | None:intergenic | 25.0% |
| ! | ATTGGCAATAAAGAATCTTA+AGG | - | chr4.4:13987506-13987525 | MS.gene09068:intron | 25.0% |
| ! | ATTGTACCATAATCACAAAT+TGG | + | chr4.4:13989241-13989260 | None:intergenic | 25.0% |
| ! | ATTTGTGATTATGGTACAAT+CGG | - | chr4.4:13989241-13989260 | MS.gene09068:intron | 25.0% |
| ! | CCATTTGATATGATGAATAA+AGG | + | chr4.4:13987695-13987714 | None:intergenic | 25.0% |
| ! | CCTTTATTCATCATATCAAA+TGG | - | chr4.4:13987692-13987711 | MS.gene09068:intron | 25.0% |
| ! | TATTGTCAAACTTGACATTA+GGG | + | chr4.4:13988470-13988489 | None:intergenic | 25.0% |
| ! | TCAAGTTTATATACTGCTTA+TGG | - | chr4.4:13989788-13989807 | MS.gene09068:CDS | 25.0% |
| ! | TGAAGAGGTTGTTTATTTAT+TGG | - | chr4.4:13988790-13988809 | MS.gene09068:CDS | 25.0% |
| ! | TGTGTGAACAATTCTTAAAA+CGG | + | chr4.4:13988850-13988869 | None:intergenic | 25.0% |
| ! | TTAATTTCTACTTTGCTGAA+GGG | - | chr4.4:13987483-13987502 | MS.gene09068:intron | 25.0% |
| ! | TTCTCAAATGATGAAAAGAT+AGG | + | chr4.4:13987331-13987350 | None:intergenic | 25.0% |
| !! | AATGTATGTAAGTTCAAGTT+TGG | - | chr4.4:13988368-13988387 | MS.gene09068:intron | 25.0% |
| !! | AGAAAATTGGTAATCAGAAA+AGG | + | chr4.4:13989348-13989367 | None:intergenic | 25.0% |
| !! | ATACTGTTGTTAGTTTCAAA+AGG | + | chr4.4:13987364-13987383 | None:intergenic | 25.0% |
| !! | CTTTTTCTGTGTCTTTTAAA+AGG | + | chr4.4:13988944-13988963 | None:intergenic | 25.0% |
| !! | GTTTAAAATTAAGTGAGCTA+GGG | + | chr4.4:13988911-13988930 | None:intergenic | 25.0% |
| !! | TTTAATTTCTACTTTGCTGA+AGG | - | chr4.4:13987482-13987501 | MS.gene09068:intron | 25.0% |
| !!! | ATATCCTTTTGAATGGATTA+AGG | + | chr4.4:13986488-13986507 | None:intergenic | 25.0% |
| !!! | CATTTCAGTTTTTTACAATC+AGG | + | chr4.4:13987896-13987915 | None:intergenic | 25.0% |
| !!! | GAATACTTTTGAAACATCAA+TGG | + | chr4.4:13987091-13987110 | None:intergenic | 25.0% |
| !!! | GATCTAAGTGTAATTTGTTA+AGG | + | chr4.4:13988678-13988697 | None:intergenic | 25.0% |
| !!! | GTTATGGAATGCATTTTTTA+TGG | - | chr4.4:13986556-13986575 | MS.gene09068:intron | 25.0% |
| !!! | TATCCTTTTGAATGGATTAA+GGG | + | chr4.4:13986487-13986506 | None:intergenic | 25.0% |
| !!! | TGCATTTTTTATGGTGTTAA+CGG | - | chr4.4:13986565-13986584 | MS.gene09068:intron | 25.0% |
| !!! | TGTGTTGATAATTTCAATGT+GGG | - | chr4.4:13986047-13986066 | MS.gene09068:intron | 25.0% |
| !!! | TTGTGTTGATAATTTCAATG+TGG | - | chr4.4:13986046-13986065 | MS.gene09068:intron | 25.0% |
| !!! | TTTTGTTTTGAATTCAGGTT+AGG | - | chr4.4:13985854-13985873 | MS.gene09068:CDS | 25.0% |
| AAACTCCACAAAAATGAAAC+AGG | + | chr4.4:13987270-13987289 | None:intergenic | 30.0% | |
| AACACAATGTAATTGTAGGA+TGG | + | chr4.4:13986446-13986465 | None:intergenic | 30.0% | |
| AACTAAATATGCCATCTCTT+GGG | + | chr4.4:13989125-13989144 | None:intergenic | 30.0% | |
| AACTCCACAAAAATGAAACA+GGG | + | chr4.4:13987269-13987288 | None:intergenic | 30.0% | |
| AATCCGGTGTAAAATTTGAA+GGG | + | chr4.4:13989646-13989665 | None:intergenic | 30.0% | |
| ACACAATGTAATTGTAGGAT+GGG | + | chr4.4:13986445-13986464 | None:intergenic | 30.0% | |
| ACTTGAGTTTGAATTGAACT+AGG | + | chr4.4:13988081-13988100 | None:intergenic | 30.0% | |
| ATACAACTATAGCACAAGAA+AGG | + | chr4.4:13987853-13987872 | None:intergenic | 30.0% | |
| ATCTCCGATTAGAAGAAAAT+TGG | + | chr4.4:13989361-13989380 | None:intergenic | 30.0% | |
| CAGAAATTGGAGAAAAGTTA+TGG | - | chr4.4:13989841-13989860 | MS.gene09068:CDS | 30.0% | |
| CATACCTTGATCATATCAAT+AGG | + | chr4.4:13985747-13985766 | None:intergenic | 30.0% | |
| CTTAATTACATGGTCCAATT+TGG | - | chr4.4:13988124-13988143 | MS.gene09068:intron | 30.0% | |
| CTTGACAAATAAAGCAATTG+AGG | - | chr4.4:13986624-13986643 | MS.gene09068:intron | 30.0% | |
| GAACATAGTACCATTGATAT+TGG | + | chr4.4:13989084-13989103 | None:intergenic | 30.0% | |
| GTATTGTCAAACTTGACATT+AGG | + | chr4.4:13988471-13988490 | None:intergenic | 30.0% | |
| GTATTTACTAGCTAATTGGT+GGG | - | chr4.4:13987751-13987770 | MS.gene09068:intron | 30.0% | |
| GTTTCATCTTAGTTCATGTT+TGG | - | chr4.4:13987915-13987934 | MS.gene09068:intron | 30.0% | |
| TAACTAAATATGCCATCTCT+TGG | + | chr4.4:13989126-13989145 | None:intergenic | 30.0% | |
| TAGCTAGAAAAACATACCAA+AGG | + | chr4.4:13989738-13989757 | None:intergenic | 30.0% | |
| TCAACCTATTGATATGATCA+AGG | - | chr4.4:13985740-13985759 | MS.gene09068:intron | 30.0% | |
| TGAGTCTTCACATAATCAAA+TGG | + | chr4.4:13989535-13989554 | None:intergenic | 30.0% | |
| TGCATTCCAATTTGTGATTA+TGG | - | chr4.4:13989232-13989251 | MS.gene09068:intron | 30.0% | |
| TGTATTTACTAGCTAATTGG+TGG | - | chr4.4:13987750-13987769 | MS.gene09068:intron | 30.0% | |
| TTAACGGTTGTCTTACTTAT+TGG | - | chr4.4:13986581-13986600 | MS.gene09068:intron | 30.0% | |
| TTCTAGTCTAAGTCATGTAA+GGG | - | chr4.4:13989316-13989335 | MS.gene09068:intron | 30.0% | |
| ! | AGAAAAGTTATGGGTTATAG+TGG | - | chr4.4:13989851-13989870 | MS.gene09068:CDS | 30.0% |
| ! | ATCAAAATTGGATCTGGAAT+TGG | - | chr4.4:13986356-13986375 | MS.gene09068:intron | 30.0% |
| ! | ATCAATAGGTTGAATAACAC+AGG | + | chr4.4:13985733-13985752 | None:intergenic | 30.0% |
| ! | CATAACTTTTCTCCAATTTC+TGG | + | chr4.4:13989843-13989862 | None:intergenic | 30.0% |
| ! | CTTTTATAAAAAGGGGTTTG+TGG | + | chr4.4:13987113-13987132 | None:intergenic | 30.0% |
| ! | GGTTTAAAATTAAGTGAGCT+AGG | + | chr4.4:13988912-13988931 | None:intergenic | 30.0% |
| ! | TTGACACTTGCTAAAAGATT+TGG | + | chr4.4:13987034-13987053 | None:intergenic | 30.0% |
| ! | TTTCTAGTCTAAGTCATGTA+AGG | - | chr4.4:13989315-13989334 | MS.gene09068:intron | 30.0% |
| ! | TTTGATTGCTTTGTTCTTAG+TGG | - | chr4.4:13986016-13986035 | MS.gene09068:intron | 30.0% |
| ! | TTTTATCTACTGTGGTGTAA+AGG | + | chr4.4:13987657-13987676 | None:intergenic | 30.0% |
| !! | CGATTGCTACAATTTAGTTT+TGG | - | chr4.4:13988732-13988751 | MS.gene09068:CDS | 30.0% |
| !! | GCTCTGAAAGAAATTACAAA+AGG | + | chr4.4:13986386-13986405 | None:intergenic | 30.0% |
| !! | GTTCTTTGAAATAGTGAATC+TGG | - | chr4.4:13989046-13989065 | MS.gene09068:intron | 30.0% |
| !! | TGAGTCATTGTATTTGGTTT+TGG | - | chr4.4:13986180-13986199 | MS.gene09068:intron | 30.0% |
| !! | TTTTAGATCTGTGAGTTGAA+GGG | - | chr4.4:13986119-13986138 | MS.gene09068:intron | 30.0% |
| !!! | ATACGAGTCTAGTTTTGAAA+AGG | + | chr4.4:13987796-13987815 | None:intergenic | 30.0% |
| !!! | TACGAGTCTAGTTTTGAAAA+GGG | + | chr4.4:13987795-13987814 | None:intergenic | 30.0% |
| AAACAAAAACATGTGGCAAC+AGG | + | chr4.4:13989153-13989172 | None:intergenic | 35.0% | |
| AAACAGCAAAGAAACAGAAC+AGG | + | chr4.4:13987232-13987251 | None:intergenic | 35.0% | |
| AAGAGAATAGTACCATGACA+TGG | + | chr4.4:13989696-13989715 | None:intergenic | 35.0% | |
| AATTGTAGCAATCGCACTAT+AGG | + | chr4.4:13988726-13988745 | None:intergenic | 35.0% | |
| ACAACATCTGGAAACAAAGA+AGG | + | chr4.4:13985968-13985987 | None:intergenic | 35.0% | |
| ACGAAGATGAAGGTTATATC+TGG | - | chr4.4:13988514-13988533 | MS.gene09068:intron | 35.0% | |
| ACTAGACTCGTATAGATCAA+AGG | - | chr4.4:13987803-13987822 | MS.gene09068:intron | 35.0% | |
| ACTGTGGTGTAAAGGAAATA+GGG | + | chr4.4:13987649-13987668 | None:intergenic | 35.0% | |
| AGAAGAGATTCAGTAGCAAA+TGG | + | chr4.4:13989464-13989483 | None:intergenic | 35.0% | |
| AGAGAATAGTACCATGACAT+GGG | + | chr4.4:13989695-13989714 | None:intergenic | 35.0% | |
| AGTTCAAGACACATATTGCA+AGG | + | chr4.4:13989186-13989205 | None:intergenic | 35.0% | |
| AGTTTGAATTGAACTAGGTC+TGG | + | chr4.4:13988076-13988095 | None:intergenic | 35.0% | |
| ATGAATAAAGGGGAAACTAG+GGG | + | chr4.4:13987683-13987702 | None:intergenic | 35.0% | |
| ATGCAAAGGACTAATGACAA+AGG | + | chr4.4:13986534-13986553 | None:intergenic | 35.0% | |
| CAACTTACAGCAACAAAACA+AGG | + | chr4.4:13988972-13988991 | None:intergenic | 35.0% | |
| CGGAGATATGATATTCCATT+TGG | - | chr4.4:13989374-13989393 | MS.gene09068:intron | 35.0% | |
| CTAAATCCATACCTCAACAA+AGG | + | chr4.4:13986213-13986232 | None:intergenic | 35.0% | |
| CTCATTGAGTTTCAAAAGTC+GGG | + | chr4.4:13988164-13988183 | None:intergenic | 35.0% | |
| CTTTATCTGGCCAATATCAA+TGG | - | chr4.4:13989071-13989090 | MS.gene09068:intron | 35.0% | |
| GAATCCGGTGTAAAATTTGA+AGG | + | chr4.4:13989647-13989666 | None:intergenic | 35.0% | |
| GATGAATAAAGGGGAAACTA+GGG | + | chr4.4:13987684-13987703 | None:intergenic | 35.0% | |
| GCTCATTGAGTTTCAAAAGT+CGG | + | chr4.4:13988165-13988184 | None:intergenic | 35.0% | |
| GTTCAAGACACATATTGCAA+GGG | + | chr4.4:13989185-13989204 | None:intergenic | 35.0% | |
| TAAGAGATACACGAAGATGA+AGG | - | chr4.4:13988504-13988523 | MS.gene09068:intron | 35.0% | |
| TACTGTGGTGTAAAGGAAAT+AGG | + | chr4.4:13987650-13987669 | None:intergenic | 35.0% | |
| TAGGGCCATCAATGTTTATT+AGG | + | chr4.4:13988893-13988912 | None:intergenic | 35.0% | |
| TCTACCAAAAAGCTCTATGT+GGG | - | chr4.4:13986671-13986690 | MS.gene09068:intron | 35.0% | |
| TCTACCATGCTTAAGAATGA+GGG | - | chr4.4:13985913-13985932 | MS.gene09068:CDS | 35.0% | |
| TGATGAATAAAGGGGAAACT+AGG | + | chr4.4:13987685-13987704 | None:intergenic | 35.0% | |
| TGCTACTGAATCTCTTCTTT+AGG | - | chr4.4:13989466-13989485 | MS.gene09068:intron | 35.0% | |
| TTCACACATCAAAAGTGAAC+TGG | - | chr4.4:13988862-13988881 | MS.gene09068:CDS | 35.0% | |
| TTCTACCATGCTTAAGAATG+AGG | - | chr4.4:13985912-13985931 | MS.gene09068:CDS | 35.0% | |
| TTGTCATTAGTCCTTTGCAT+TGG | - | chr4.4:13986534-13986553 | MS.gene09068:intron | 35.0% | |
| TTGTTGAGGTATGGATTTAG+TGG | - | chr4.4:13986213-13986232 | MS.gene09068:intron | 35.0% | |
| ! | AATTCAGGTTAGGATTCAAC+TGG | - | chr4.4:13985864-13985883 | MS.gene09068:CDS | 35.0% |
| ! | ATTCAGGTTAGGATTCAACT+GGG | - | chr4.4:13985865-13985884 | MS.gene09068:CDS | 35.0% |
| ! | ATTGAGTCTTTTATGCTCAG+TGG | - | chr4.4:13988198-13988217 | MS.gene09068:intron | 35.0% |
| ! | TTGAGTCTTTTATGCTCAGT+GGG | - | chr4.4:13988199-13988218 | MS.gene09068:intron | 35.0% |
| ! | TTTAGATCTGTGAGTTGAAG+GGG | - | chr4.4:13986120-13986139 | MS.gene09068:intron | 35.0% |
| !! | AATGCCCTGTTTCATTTTTG+TGG | - | chr4.4:13987262-13987281 | MS.gene09068:intron | 35.0% |
| !! | AGTGAATCTGGTTCTTTATC+TGG | - | chr4.4:13989058-13989077 | MS.gene09068:intron | 35.0% |
| !! | CTTTCTGTATTGAGTTGAGT+AGG | - | chr4.4:13988416-13988435 | MS.gene09068:intron | 35.0% |
| !! | CTTTTAGATCTGTGAGTTGA+AGG | - | chr4.4:13986118-13986137 | MS.gene09068:intron | 35.0% |
| !! | GCATTTCTTTCTAGTTGGAT+AGG | - | chr4.4:13988648-13988667 | MS.gene09068:CDS | 35.0% |
| !! | GTTCTGTTTCTTTGCTGTTT+AGG | - | chr4.4:13987232-13987251 | MS.gene09068:intron | 35.0% |
| !! | TCAAAGTGTTGAGTTCTTCA+AGG | - | chr4.4:13986924-13986943 | MS.gene09068:intron | 35.0% |
| !! | TTAGTCCTTTGCATTGGTTA+TGG | - | chr4.4:13986540-13986559 | MS.gene09068:intron | 35.0% |
| !!! | ACGAGTCTAGTTTTGAAAAG+GGG | + | chr4.4:13987794-13987813 | None:intergenic | 35.0% |
| !!! | AGGGGATTTTTTATCTACTG+TGG | + | chr4.4:13987665-13987684 | None:intergenic | 35.0% |
| !!! | CTTGTTTTGTTGCTGTAAGT+TGG | - | chr4.4:13988970-13988989 | MS.gene09068:intron | 35.0% |
| AAAGCAATTGAGGCCAATGA+TGG | - | chr4.4:13986634-13986653 | MS.gene09068:intron | 40.0% | |
| AACACCCTCATTCTTAAGCA+TGG | + | chr4.4:13985920-13985939 | None:intergenic | 40.0% | |
| AAGCTGAATCACTTCTTGCA+GGG | - | chr4.4:13986241-13986260 | MS.gene09068:intron | 40.0% | |
| AGTCATTTCACCTAGACCAA+CGG | + | chr4.4:13986953-13986972 | None:intergenic | 40.0% | |
| ATGAAGGGATTCTTTCACTG+TGG | - | chr4.4:13986836-13986855 | MS.gene09068:intron | 40.0% | |
| CAACTCACAGATCTAAAAGC+AGG | + | chr4.4:13986117-13986136 | None:intergenic | 40.0% | |
| CAACTCACCTAAATGTTCCA+AGG | + | chr4.4:13986312-13986331 | None:intergenic | 40.0% | |
| CAGCCCTTAATCCATTCAAA+AGG | - | chr4.4:13986481-13986500 | MS.gene09068:intron | 40.0% | |
| CTCTACCAAAAAGCTCTATG+TGG | - | chr4.4:13986670-13986689 | MS.gene09068:intron | 40.0% | |
| CTTCATCCTTTGTTGAGGTA+TGG | - | chr4.4:13986204-13986223 | MS.gene09068:intron | 40.0% | |
| GAGAATAGTACCATGACATG+GGG | + | chr4.4:13989694-13989713 | None:intergenic | 40.0% | |
| GAGGGAAAATATCCATACAC+CGG | - | chr4.4:13989580-13989599 | MS.gene09068:CDS | 40.0% | |
| GATACTATCTTGAGTAGGGT+TGG | - | chr4.4:13988030-13988049 | MS.gene09068:intron | 40.0% | |
| GCATTCCATAACCAATGCAA+AGG | + | chr4.4:13986548-13986567 | None:intergenic | 40.0% | |
| TAACTCAGTGAACTGTGAAG+AGG | - | chr4.4:13988775-13988794 | MS.gene09068:CDS | 40.0% | |
| TAAGCTGAATCACTTCTTGC+AGG | - | chr4.4:13986240-13986259 | MS.gene09068:intron | 40.0% | |
| TAGGGAGGAAGATTAGATGA+TGG | + | chr4.4:13987631-13987650 | None:intergenic | 40.0% | |
| TATGGTACAATCGGTAGTCT+TGG | - | chr4.4:13989250-13989269 | MS.gene09068:intron | 40.0% | |
| TCTAGGTGAAATGACTACTG+TGG | - | chr4.4:13986957-13986976 | MS.gene09068:intron | 40.0% | |
| TGTCAAACTTGACATTAGGG+CGG | + | chr4.4:13988467-13988486 | None:intergenic | 40.0% | |
| TTAGGTGCAAGTAGTGTATC+TGG | - | chr4.4:13989484-13989503 | MS.gene09068:intron | 40.0% | |
| TTCTACTTTGCTGAAGGGAT+TGG | - | chr4.4:13987488-13987507 | MS.gene09068:intron | 40.0% | |
| TTGGACTTCATCCTTTGTTG+AGG | - | chr4.4:13986199-13986218 | MS.gene09068:intron | 40.0% | |
| ! | ACTGGGCATTTCTTTCTAGT+TGG | - | chr4.4:13988643-13988662 | MS.gene09068:CDS | 40.0% |
| ! | ATGCTTAAGAATGAGGGTGT+TGG | - | chr4.4:13985919-13985938 | MS.gene09068:CDS | 40.0% |
| ! | GGACCCTTCAAATTTTACAC+CGG | - | chr4.4:13989640-13989659 | MS.gene09068:intron | 40.0% |
| !! | AGAAGCATCACTGTTATTCG+AGG | - | chr4.4:13988323-13988342 | MS.gene09068:intron | 40.0% |
| !! | CATAGAGCTTTTTGGTAGAG+TGG | + | chr4.4:13986670-13986689 | None:intergenic | 40.0% |
| !! | TCTTTTAAAAGGCTGACGCA+TGG | + | chr4.4:13988933-13988952 | None:intergenic | 40.0% |
| !!! | TTTTCTCCAATTTCTGGAGC+TGG | + | chr4.4:13989837-13989856 | None:intergenic | 40.0% |
| AAACTACACAAACGCCTTCC+AGG | - | chr4.4:13986792-13986811 | MS.gene09068:intron | 45.0% | |
| AAAGATGCAACCTGATGCTG+AGG | - | chr4.4:13989561-13989580 | MS.gene09068:CDS | 45.0% | |
| AAGATGCAACCTGATGCTGA+GGG | - | chr4.4:13989562-13989581 | MS.gene09068:CDS | 45.0% | |
| ACCATCAAGCCTTTCGTCAA+TGG | - | chr4.4:13985684-13985703 | MS.gene09068:intron | 45.0% | |
| ACCATTGACGAAAGGCTTGA+TGG | + | chr4.4:13985688-13985707 | None:intergenic | 45.0% | |
| ACTGCTTATGGCAGATGACA+TGG | - | chr4.4:13989800-13989819 | MS.gene09068:CDS | 45.0% | |
| AGCATCACTGTTATTCGAGG+CGG | - | chr4.4:13988326-13988345 | MS.gene09068:intron | 45.0% | |
| ATCAAGCCTTTCGTCAATGG+TGG | - | chr4.4:13985687-13985706 | MS.gene09068:intron | 45.0% | |
| CAATCCTGACACAGTAGACA+GGG | + | chr4.4:13989669-13989688 | None:intergenic | 45.0% | |
| CTTTATGCACACCCAAGAGA+TGG | - | chr4.4:13989111-13989130 | MS.gene09068:intron | 45.0% | |
| GAATTGAACTAGGTCTGGCT+TGG | + | chr4.4:13988071-13988090 | None:intergenic | 45.0% | |
| GAGTTCTTCAAGGATACCGT+TGG | - | chr4.4:13986934-13986953 | MS.gene09068:intron | 45.0% | |
| GGGATTCTTTCACTGTGGAA+AGG | - | chr4.4:13986841-13986860 | MS.gene09068:intron | 45.0% | |
| GGTGAAATGACTACTGTGGT+TGG | - | chr4.4:13986961-13986980 | MS.gene09068:intron | 45.0% | |
| GTGGTGTAAAGGAAATAGGG+AGG | + | chr4.4:13987646-13987665 | None:intergenic | 45.0% | |
| GTTAGGATTCAACTGGGTCA+AGG | - | chr4.4:13985871-13985890 | MS.gene09068:CDS | 45.0% | |
| TTCCAGGCACTTTACCGTAT+CGG | - | chr4.4:13986808-13986827 | MS.gene09068:intron | 45.0% | |
| TTTGGCACTCATTCGTATGC+AGG | - | chr4.4:13986738-13986757 | MS.gene09068:intron | 45.0% | |
| ! | AAGAGCCATGGCATTGAACA+TGG | - | chr4.4:13986882-13986901 | MS.gene09068:intron | 45.0% |
| ! | AGAGCCATGGCATTGAACAT+GGG | - | chr4.4:13986883-13986902 | MS.gene09068:intron | 45.0% |
| ! | GGATATTTTCCCTCAGCATC+AGG | + | chr4.4:13989574-13989593 | None:intergenic | 45.0% |
| ! | TCAGCCCACATAGAGCTTTT+TGG | + | chr4.4:13986678-13986697 | None:intergenic | 45.0% |
| ! | TTCAAGGATACCGTTGGTCT+AGG | - | chr4.4:13986940-13986959 | MS.gene09068:intron | 45.0% |
| ! | TTGACGAAAGGCTTGATGGT+TGG | + | chr4.4:13985684-13985703 | None:intergenic | 45.0% |
| !! | AGCTTTTTGGTAGAGTGGCA+GGG | + | chr4.4:13986665-13986684 | None:intergenic | 45.0% |
| !! | AGTTGGTAGTCCAGCTGATT+TGG | - | chr4.4:13986720-13986739 | MS.gene09068:intron | 45.0% |
| !! | GGAAGGCGTTTGTGTAGTTT+CGG | + | chr4.4:13986792-13986811 | None:intergenic | 45.0% |
| !! | GGGTGTTGGTGCTTTCTATA+AGG | - | chr4.4:13985933-13985952 | MS.gene09068:CDS | 45.0% |
| !! | GTATTGAGTTGAGTAGGCAC+AGG | - | chr4.4:13988422-13988441 | MS.gene09068:intron | 45.0% |
| !! | TCACTCTCTAGCTAGCTTTC+TGG | - | chr4.4:13987719-13987738 | MS.gene09068:intron | 45.0% |
| !! | TTTCACTGTGGAAAGGTGCT+GGG | - | chr4.4:13986848-13986867 | MS.gene09068:intron | 45.0% |
| !!! | AATTTATTCTTTTATAAAAA+GGG | + | chr4.4:13987121-13987140 | None:intergenic | 5.0% |
| !!! | TAATTTATTCTTTTATAAAA+AGG | + | chr4.4:13987122-13987141 | None:intergenic | 5.0% |
| AAACCAGCAGCAACAGGCTT+AGG | + | chr4.4:13985657-13985676 | None:intergenic | 50.0% | |
| AAATGTTCCAAGGCGTGCAG+TGG | + | chr4.4:13986302-13986321 | None:intergenic | 50.0% | |
| AGTTGAGTAGGCACAGGAGT+TGG | - | chr4.4:13988428-13988447 | MS.gene09068:intron | 50.0% | |
| CATCCCCATGTTCAATGCCA+TGG | + | chr4.4:13986890-13986909 | None:intergenic | 50.0% | |
| CCTCAACCAGCTCCAGAAAT+TGG | - | chr4.4:13989828-13989847 | MS.gene09068:CDS | 50.0% | |
| CGAATGAGTGCCAAATCAGC+TGG | + | chr4.4:13986733-13986752 | None:intergenic | 50.0% | |
| CTGCACGCCTTGGAACATTT+AGG | - | chr4.4:13986302-13986321 | MS.gene09068:intron | 50.0% | |
| GACACAGTAGACAGGGAATC+CGG | + | chr4.4:13989662-13989681 | None:intergenic | 50.0% | |
| GATTCCCTGTCTACTGTGTC+AGG | - | chr4.4:13989662-13989681 | MS.gene09068:intron | 50.0% | |
| GCAATCCTGACACAGTAGAC+AGG | + | chr4.4:13989670-13989689 | None:intergenic | 50.0% | |
| GCCATGGCTCTTACTACAGT+AGG | + | chr4.4:13986874-13986893 | None:intergenic | 50.0% | |
| GCCTACTGTAGTAAGAGCCA+TGG | - | chr4.4:13986870-13986889 | MS.gene09068:intron | 50.0% | |
| GGTGCAATTGGAGCAACAGT+TGG | - | chr4.4:13986703-13986722 | MS.gene09068:intron | 50.0% | |
| GTCTATCAGCTGGGTTACTC+AGG | - | chr4.4:13986263-13986282 | MS.gene09068:intron | 50.0% | |
| TCTTGCAGGGTCTATCAGCT+GGG | - | chr4.4:13986254-13986273 | MS.gene09068:intron | 50.0% | |
| TTCTTGCAGGGTCTATCAGC+TGG | - | chr4.4:13986253-13986272 | MS.gene09068:intron | 50.0% | |
| ! | ACCGTATCGGTGCAGATGAA+GGG | - | chr4.4:13986821-13986840 | MS.gene09068:intron | 50.0% |
| ! | CTTTCACTGTGGAAAGGTGC+TGG | - | chr4.4:13986847-13986866 | MS.gene09068:intron | 50.0% |
| ! | GAAGCACCACCATTGACGAA+AGG | + | chr4.4:13985696-13985715 | None:intergenic | 50.0% |
| ! | GAGCCATGGCATTGAACATG+GGG | - | chr4.4:13986884-13986903 | MS.gene09068:intron | 50.0% |
| ! | GATACGGTAAAGTGCCTGGA+AGG | + | chr4.4:13986809-13986828 | None:intergenic | 50.0% |
| ! | TACCGTATCGGTGCAGATGA+AGG | - | chr4.4:13986820-13986839 | MS.gene09068:intron | 50.0% |
| ! | TCCCTTCATCTGCACCGATA+CGG | + | chr4.4:13986825-13986844 | None:intergenic | 50.0% |
| ! | TTCGTCAATGGTGGTGCTTC+TGG | - | chr4.4:13985696-13985715 | MS.gene09068:intron | 50.0% |
| !! | CCAATTTCTGGAGCTGGTTG+AGG | + | chr4.4:13989831-13989850 | None:intergenic | 50.0% |
| !! | GAGCTTTTTGGTAGAGTGGC+AGG | + | chr4.4:13986666-13986685 | None:intergenic | 50.0% |
| !! | GCTTTTTGGTAGAGTGGCAG+GGG | + | chr4.4:13986664-13986683 | None:intergenic | 50.0% |
| AAGCCTAAGCCTGTTGCTGC+TGG | - | chr4.4:13985651-13985670 | MS.gene09068:CDS | 55.0% | |
| ACTTACACCACTGCACGCCT+TGG | - | chr4.4:13986292-13986311 | MS.gene09068:intron | 55.0% | |
| ATCAGCTGGGTTACTCAGGC+AGG | - | chr4.4:13986267-13986286 | MS.gene09068:intron | 55.0% | |
| CAGGATTGCTCCCCATGTCA+TGG | - | chr4.4:13989681-13989700 | MS.gene09068:intron | 55.0% | |
| CAGTCAAGAGAGCCGGTGTA+TGG | + | chr4.4:13989595-13989614 | None:intergenic | 55.0% | |
| GACAGCACAGTCAAGAGAGC+CGG | + | chr4.4:13989602-13989621 | None:intergenic | 55.0% | |
| ! | CACCGATACGGTAAAGTGCC+TGG | + | chr4.4:13986813-13986832 | None:intergenic | 55.0% |
| ! | TAGTTTCGGCGCTGAGCAAG+AGG | + | chr4.4:13986778-13986797 | None:intergenic | 55.0% |
| !! | AGCCTGTTGCTGCTGGTTTC+TGG | - | chr4.4:13985658-13985677 | MS.gene09068:CDS | 55.0% |
| GGCCAGAAACCAGCAGCAAC+AGG | + | chr4.4:13985663-13985682 | None:intergenic | 60.0% | |
| GGGCTGACTGCTGGTGCAAT+TGG | - | chr4.4:13986691-13986710 | MS.gene09068:intron | 60.0% | |
| TGGCAGGGGCTTGCCATCAT+TGG | + | chr4.4:13986650-13986669 | None:intergenic | 60.0% | |
| ! | GCTCTATGTGGGCTGACTGC+TGG | - | chr4.4:13986682-13986701 | MS.gene09068:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 13985636 | 13989870 | 13985636 | ID=MS.gene09068 |
| chr4.4 | mRNA | 13985636 | 13989870 | 13985636 | ID=MS.gene09068.t1;Parent=MS.gene09068 |
| chr4.4 | exon | 13989745 | 13989870 | 13989745 | ID=MS.gene09068.t1.exon1;Parent=MS.gene09068.t1 |
| chr4.4 | CDS | 13989745 | 13989870 | 13989745 | ID=cds.MS.gene09068.t1;Parent=MS.gene09068.t1 |
| chr4.4 | exon | 13989552 | 13989635 | 13989552 | ID=MS.gene09068.t1.exon2;Parent=MS.gene09068.t1 |
| chr4.4 | CDS | 13989552 | 13989635 | 13989552 | ID=cds.MS.gene09068.t1;Parent=MS.gene09068.t1 |
| chr4.4 | exon | 13989183 | 13989244 | 13989183 | ID=MS.gene09068.t1.exon3;Parent=MS.gene09068.t1 |
| chr4.4 | CDS | 13989183 | 13989244 | 13989183 | ID=cds.MS.gene09068.t1;Parent=MS.gene09068.t1 |
| chr4.4 | exon | 13988524 | 13988885 | 13988524 | ID=MS.gene09068.t1.exon4;Parent=MS.gene09068.t1 |
| chr4.4 | CDS | 13988524 | 13988885 | 13988524 | ID=cds.MS.gene09068.t1;Parent=MS.gene09068.t1 |
| chr4.4 | exon | 13985804 | 13986018 | 13985804 | ID=MS.gene09068.t1.exon5;Parent=MS.gene09068.t1 |
| chr4.4 | CDS | 13985804 | 13986018 | 13985804 | ID=cds.MS.gene09068.t1;Parent=MS.gene09068.t1 |
| chr4.4 | exon | 13985636 | 13985692 | 13985636 | ID=MS.gene09068.t1.exon6;Parent=MS.gene09068.t1 |
| chr4.4 | CDS | 13985636 | 13985692 | 13985636 | ID=cds.MS.gene09068.t1;Parent=MS.gene09068.t1 |
| Gene Sequence |
| Protein sequence |
