Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21596.t1 | XP_003591661.1 | 95.4 | 305 | 11 | 1 | 1 | 305 | 1 | 302 | 8.70E-161 | 576.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21596.t1 | Q9XI74 | 71.8 | 298 | 75 | 4 | 13 | 305 | 12 | 305 | 1.7e-117 | 423.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21596.t1 | G7ZYE6 | 95.4 | 305 | 11 | 1 | 1 | 305 | 1 | 302 | 6.3e-161 | 576.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037607 | MS.gene21596 | PPI |
| MS.gene21596 | MS.gene84655 | PPI |
| MS.gene21596 | MS.gene071145 | PPI |
| MS.gene21596 | MS.gene44265 | PPI |
| MS.gene005651 | MS.gene21596 | PPI |
| MS.gene21596 | MS.gene010661 | PPI |
| MS.gene21596 | MS.gene73296 | PPI |
| MS.gene21596 | MS.gene008904 | PPI |
| MS.gene21596 | MS.gene002611 | PPI |
| MS.gene21596 | MS.gene97484 | PPI |
| MS.gene21596 | MS.gene07162 | PPI |
| MS.gene048336 | MS.gene21596 | PPI |
| MS.gene027755 | MS.gene21596 | PPI |
| MS.gene21596 | MS.gene99446 | PPI |
| MS.gene21596 | MS.gene004291 | PPI |
| MS.gene86246 | MS.gene21596 | PPI |
| MS.gene21596 | MS.gene071146 | PPI |
| MS.gene21596 | MS.gene03010 | PPI |
| MS.gene21596 | MS.gene53384 | PPI |
| MS.gene21596 | MS.gene09068 | PPI |
| MS.gene21596 | MS.gene022937 | PPI |
| MS.gene20684 | MS.gene21596 | PPI |
| MS.gene21596 | MS.gene90775 | PPI |
| MS.gene21596 | MS.gene029856 | PPI |
| MS.gene21596 | MS.gene023557 | PPI |
| MS.gene21596 | MS.gene065200 | PPI |
| MS.gene21596 | MS.gene29137 | PPI |
| MS.gene21596 | MS.gene97486 | PPI |
| MS.gene21596 | MS.gene001110 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21596.t1 | MTR_1g090330 | 95.410 | 305 | 11 | 1 | 1 | 305 | 1 | 302 | 0.0 | 598 |
| MS.gene21596.t1 | MTR_4g018750 | 36.806 | 288 | 167 | 5 | 20 | 300 | 18 | 297 | 1.20e-58 | 190 |
| MS.gene21596.t1 | MTR_4g018750 | 29.255 | 188 | 121 | 3 | 16 | 200 | 118 | 296 | 1.80e-14 | 72.8 |
| MS.gene21596.t1 | MTR_7g066690 | 36.237 | 287 | 168 | 5 | 20 | 299 | 20 | 298 | 5.09e-58 | 189 |
| MS.gene21596.t1 | MTR_7g066690 | 26.263 | 198 | 142 | 3 | 105 | 298 | 8 | 205 | 8.31e-16 | 76.6 |
| MS.gene21596.t1 | MTR_7g066690 | 28.934 | 197 | 127 | 4 | 11 | 203 | 114 | 301 | 7.51e-15 | 73.9 |
| MS.gene21596.t1 | MTR_3g100570 | 34.219 | 301 | 173 | 5 | 22 | 299 | 11 | 309 | 5.25e-53 | 176 |
| MS.gene21596.t1 | MTR_3g462140 | 34.228 | 298 | 162 | 5 | 18 | 298 | 16 | 296 | 3.87e-52 | 173 |
| MS.gene21596.t1 | MTR_5g032420 | 31.715 | 309 | 179 | 3 | 22 | 299 | 11 | 318 | 1.10e-49 | 167 |
| MS.gene21596.t1 | MTR_8g068890 | 32.673 | 303 | 177 | 5 | 22 | 299 | 11 | 311 | 2.26e-48 | 164 |
| MS.gene21596.t1 | MTR_1g088995 | 31.707 | 287 | 185 | 4 | 20 | 305 | 36 | 312 | 2.88e-48 | 164 |
| MS.gene21596.t1 | MTR_1g088995 | 30.233 | 172 | 108 | 4 | 107 | 277 | 26 | 186 | 5.53e-14 | 71.6 |
| MS.gene21596.t1 | MTR_4g018750 | 36.508 | 252 | 145 | 5 | 20 | 264 | 18 | 261 | 2.43e-46 | 158 |
| MS.gene21596.t1 | MTR_4g018750 | 28.415 | 183 | 127 | 3 | 120 | 298 | 21 | 203 | 5.70e-17 | 79.7 |
| MS.gene21596.t1 | MTR_8g086070 | 32.979 | 282 | 171 | 5 | 23 | 299 | 27 | 295 | 5.04e-40 | 142 |
| MS.gene21596.t1 | MTR_4g057850 | 29.787 | 282 | 186 | 6 | 14 | 290 | 19 | 293 | 1.43e-27 | 109 |
| MS.gene21596.t1 | MTR_4g057850 | 29.268 | 205 | 129 | 6 | 98 | 296 | 4 | 198 | 6.47e-15 | 74.3 |
| MS.gene21596.t1 | MTR_8g086070 | 34.973 | 183 | 102 | 4 | 23 | 200 | 27 | 197 | 4.08e-27 | 105 |
| MS.gene21596.t1 | MTR_5g055410 | 27.941 | 272 | 187 | 6 | 33 | 299 | 37 | 304 | 3.60e-25 | 103 |
| MS.gene21596.t1 | MTR_1g088995 | 29.798 | 198 | 129 | 3 | 20 | 216 | 36 | 224 | 5.90e-25 | 100 |
| MS.gene21596.t1 | MTR_1g088995 | 30.233 | 172 | 108 | 4 | 107 | 277 | 26 | 186 | 3.21e-14 | 71.2 |
| MS.gene21596.t1 | MTR_8g066975 | 27.076 | 277 | 191 | 6 | 33 | 301 | 24 | 297 | 1.07e-23 | 98.6 |
| MS.gene21596.t1 | MTR_8g066975 | 28.141 | 199 | 134 | 5 | 111 | 301 | 4 | 201 | 1.44e-15 | 75.9 |
| MS.gene21596.t1 | MTR_1g087840 | 28.873 | 284 | 169 | 10 | 33 | 299 | 35 | 302 | 3.69e-23 | 97.4 |
| MS.gene21596.t1 | MTR_7g109135 | 26.761 | 284 | 195 | 8 | 23 | 299 | 28 | 305 | 1.64e-22 | 95.9 |
| MS.gene21596.t1 | MTR_5g030530 | 26.715 | 277 | 192 | 6 | 33 | 301 | 24 | 297 | 5.15e-22 | 94.0 |
| MS.gene21596.t1 | MTR_5g030530 | 27.184 | 206 | 130 | 5 | 5 | 198 | 96 | 293 | 7.91e-14 | 70.9 |
| MS.gene21596.t1 | MTR_5g030530 | 27.368 | 190 | 129 | 5 | 117 | 299 | 11 | 198 | 1.41e-12 | 67.4 |
| MS.gene21596.t1 | MTR_4g012850 | 31.250 | 176 | 113 | 2 | 33 | 205 | 126 | 296 | 1.32e-21 | 92.8 |
| MS.gene21596.t1 | MTR_4g012850 | 25.292 | 257 | 171 | 6 | 32 | 281 | 31 | 273 | 2.26e-18 | 84.0 |
| MS.gene21596.t1 | MTR_7g084400 | 31.176 | 170 | 103 | 3 | 16 | 182 | 308 | 466 | 1.62e-20 | 91.7 |
| MS.gene21596.t1 | MTR_7g084400 | 25.694 | 288 | 181 | 7 | 22 | 298 | 218 | 483 | 5.30e-18 | 84.3 |
| MS.gene21596.t1 | MTR_4g119770 | 25.806 | 310 | 186 | 8 | 21 | 294 | 18 | 319 | 5.71e-20 | 89.0 |
| MS.gene21596.t1 | MTR_4g119770 | 23.223 | 211 | 140 | 5 | 108 | 300 | 4 | 210 | 1.05e-14 | 73.9 |
| MS.gene21596.t1 | MTR_2g436930 | 25.649 | 308 | 187 | 8 | 21 | 294 | 19 | 318 | 8.06e-20 | 88.6 |
| MS.gene21596.t1 | MTR_2g436930 | 25.128 | 195 | 130 | 4 | 117 | 299 | 18 | 208 | 3.49e-14 | 72.4 |
| MS.gene21596.t1 | MTR_1g097890 | 30.389 | 283 | 155 | 9 | 22 | 298 | 56 | 302 | 1.56e-19 | 87.4 |
| MS.gene21596.t1 | MTR_8g027975 | 28.351 | 194 | 119 | 5 | 5 | 179 | 139 | 331 | 5.79e-19 | 86.3 |
| MS.gene21596.t1 | MTR_8g027975 | 25.253 | 198 | 134 | 4 | 109 | 299 | 46 | 236 | 1.63e-11 | 64.7 |
| MS.gene21596.t1 | MTR_7g109135 | 24.823 | 282 | 196 | 7 | 23 | 299 | 28 | 298 | 1.09e-18 | 85.1 |
| MS.gene21596.t1 | MTR_7g064980 | 22.956 | 318 | 214 | 7 | 5 | 305 | 14 | 317 | 1.82e-18 | 84.3 |
| MS.gene21596.t1 | MTR_2g102010 | 24.904 | 261 | 172 | 6 | 30 | 281 | 30 | 275 | 3.74e-18 | 83.2 |
| MS.gene21596.t1 | MTR_2g102010 | 28.824 | 170 | 111 | 3 | 33 | 197 | 126 | 290 | 5.36e-15 | 74.3 |
| MS.gene21596.t1 | MTR_8g076760 | 25.347 | 288 | 189 | 10 | 33 | 303 | 30 | 308 | 5.15e-18 | 83.2 |
| MS.gene21596.t1 | MTR_5g009500 | 29.843 | 191 | 115 | 5 | 7 | 179 | 127 | 316 | 1.77e-17 | 82.0 |
| MS.gene21596.t1 | MTR_5g009500 | 22.667 | 300 | 203 | 6 | 26 | 302 | 47 | 340 | 3.52e-14 | 72.4 |
| MS.gene21596.t1 | MTR_8g096050 | 28.962 | 183 | 117 | 5 | 4 | 180 | 306 | 481 | 1.95e-17 | 82.8 |
| MS.gene21596.t1 | MTR_8g096050 | 25.532 | 282 | 192 | 7 | 22 | 298 | 232 | 500 | 2.30e-16 | 79.7 |
| MS.gene21596.t1 | MTR_7g109135 | 27.039 | 233 | 159 | 7 | 72 | 299 | 1 | 227 | 3.50e-17 | 79.7 |
| MS.gene21596.t1 | MTR_3g098460 | 29.545 | 176 | 99 | 5 | 16 | 180 | 298 | 459 | 7.69e-17 | 80.9 |
| MS.gene21596.t1 | MTR_3g098460 | 23.759 | 282 | 197 | 7 | 22 | 298 | 210 | 478 | 2.39e-15 | 76.6 |
| MS.gene21596.t1 | MTR_1g012030 | 23.024 | 291 | 198 | 9 | 16 | 299 | 138 | 409 | 2.00e-15 | 76.6 |
| MS.gene21596.t1 | MTR_1g012030 | 26.437 | 174 | 117 | 3 | 31 | 202 | 247 | 411 | 2.07e-12 | 67.4 |
| MS.gene21596.t1 | MTR_7g068340 | 21.147 | 279 | 194 | 6 | 31 | 303 | 101 | 359 | 2.17e-15 | 76.3 |
| MS.gene21596.t1 | MTR_4g119770 | 27.016 | 248 | 144 | 7 | 21 | 239 | 18 | 257 | 2.27e-15 | 74.7 |
| MS.gene21596.t1 | MTR_4g119770 | 23.223 | 211 | 140 | 5 | 108 | 300 | 4 | 210 | 4.29e-15 | 73.9 |
| MS.gene21596.t1 | MTR_3g107510 | 23.404 | 282 | 196 | 7 | 21 | 298 | 126 | 391 | 3.05e-15 | 75.9 |
| MS.gene21596.t1 | MTR_3g107510 | 25.000 | 180 | 124 | 3 | 31 | 208 | 230 | 400 | 9.18e-12 | 65.5 |
| MS.gene21596.t1 | MTR_5g081150 | 22.848 | 302 | 203 | 5 | 13 | 297 | 30 | 318 | 8.24e-15 | 73.9 |
| MS.gene21596.t1 | MTR_3g104600 | 22.508 | 311 | 204 | 10 | 16 | 302 | 34 | 331 | 1.42e-14 | 73.6 |
| MS.gene21596.t1 | MTR_7g109135 | 27.014 | 211 | 143 | 7 | 94 | 299 | 2 | 206 | 2.07e-14 | 71.2 |
| MS.gene21596.t1 | MTR_5g081910 | 22.917 | 288 | 164 | 10 | 31 | 275 | 22 | 294 | 3.41e-13 | 69.3 |
| MS.gene21596.t1 | MTR_6g034515 | 24.373 | 279 | 174 | 9 | 33 | 297 | 83 | 338 | 3.98e-13 | 69.3 |
| MS.gene21596.t1 | MTR_6g034515 | 24.873 | 197 | 128 | 5 | 21 | 212 | 164 | 345 | 1.03e-12 | 68.2 |
| MS.gene21596.t1 | MTR_4g114320 | 24.309 | 181 | 117 | 4 | 31 | 205 | 232 | 398 | 8.28e-13 | 68.6 |
| MS.gene21596.t1 | MTR_4g114320 | 20.619 | 291 | 205 | 8 | 16 | 299 | 122 | 393 | 6.40e-11 | 63.2 |
| MS.gene21596.t1 | MTR_4g114320 | 22.449 | 196 | 133 | 5 | 106 | 298 | 116 | 295 | 6.82e-11 | 62.8 |
| MS.gene21596.t1 | MTR_4g088545 | 22.184 | 293 | 209 | 5 | 22 | 302 | 17 | 302 | 8.81e-13 | 68.2 |
| MS.gene21596.t1 | MTR_8g098240 | 25.694 | 288 | 186 | 8 | 21 | 302 | 324 | 589 | 1.27e-12 | 68.6 |
| MS.gene21596.t1 | MTR_3g028590 | 21.805 | 266 | 196 | 4 | 17 | 274 | 93 | 354 | 1.47e-12 | 67.8 |
| MS.gene21596.t1 | MTR_3g028590 | 21.805 | 266 | 196 | 4 | 17 | 274 | 97 | 358 | 1.59e-12 | 67.8 |
| MS.gene21596.t1 | MTR_7g015870 | 22.801 | 307 | 180 | 10 | 32 | 305 | 36 | 318 | 2.60e-12 | 67.0 |
| MS.gene21596.t1 | MTR_7g015870 | 21.739 | 299 | 180 | 9 | 32 | 300 | 40 | 314 | 3.61e-12 | 66.2 |
| MS.gene21596.t1 | MTR_8g092080 | 23.843 | 281 | 176 | 6 | 23 | 299 | 58 | 304 | 4.52e-12 | 66.2 |
| MS.gene21596.t1 | MTR_5g073040 | 23.368 | 291 | 191 | 8 | 21 | 299 | 43 | 313 | 7.41e-12 | 65.5 |
| MS.gene21596.t1 | MTR_4g078545 | 26.111 | 180 | 125 | 4 | 103 | 275 | 64 | 242 | 8.01e-12 | 65.5 |
| MS.gene21596.t1 | MTR_4g078545 | 22.180 | 266 | 195 | 5 | 17 | 274 | 75 | 336 | 3.78e-11 | 63.5 |
| MS.gene21596.t1 | MTR_2g436930 | 27.174 | 184 | 104 | 6 | 21 | 183 | 42 | 216 | 8.41e-12 | 64.3 |
| MS.gene21596.t1 | MTR_3g104500 | 21.708 | 281 | 202 | 8 | 33 | 302 | 50 | 323 | 9.39e-12 | 65.1 |
| MS.gene21596.t1 | MTR_6g091800 | 22.549 | 204 | 136 | 4 | 108 | 298 | 13 | 207 | 2.33e-11 | 63.5 |
| MS.gene21596.t1 | MTR_8g099910 | 24.561 | 285 | 178 | 9 | 33 | 304 | 89 | 349 | 2.69e-11 | 63.9 |
| MS.gene21596.t1 | MTR_6g015860 | 21.843 | 293 | 185 | 11 | 32 | 299 | 32 | 305 | 2.99e-11 | 63.5 |
| MS.gene21596.t1 | MTR_6g091800 | 22.549 | 204 | 136 | 4 | 108 | 298 | 13 | 207 | 4.02e-11 | 62.8 |
| MS.gene21596.t1 | MTR_1g036280 | 33.974 | 156 | 90 | 7 | 35 | 180 | 182 | 334 | 6.21e-11 | 62.8 |
| MS.gene21596.t1 | MTR_5g081910 | 26.609 | 233 | 135 | 8 | 1 | 210 | 26 | 245 | 7.74e-11 | 62.0 |
| MS.gene21596.t1 | MTR_3g025800 | 21.831 | 284 | 188 | 7 | 21 | 277 | 32 | 308 | 8.66e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21596.t1 | AT1G14140 | 71.812 | 298 | 75 | 4 | 13 | 305 | 12 | 305 | 6.17e-156 | 438 |
| MS.gene21596.t1 | AT5G58970 | 36.552 | 290 | 165 | 5 | 18 | 298 | 17 | 296 | 7.06e-59 | 191 |
| MS.gene21596.t1 | AT5G58970 | 29.651 | 172 | 109 | 3 | 14 | 182 | 117 | 279 | 1.83e-14 | 72.8 |
| MS.gene21596.t1 | AT4G24570 | 34.641 | 306 | 165 | 6 | 22 | 299 | 11 | 309 | 8.20e-56 | 183 |
| MS.gene21596.t1 | AT3G54110 | 34.266 | 286 | 175 | 5 | 20 | 299 | 18 | 296 | 1.36e-55 | 182 |
| MS.gene21596.t1 | AT3G54110 | 29.016 | 193 | 122 | 4 | 21 | 210 | 126 | 306 | 4.05e-16 | 77.8 |
| MS.gene21596.t1 | AT2G22500 | 33.893 | 298 | 176 | 5 | 22 | 299 | 11 | 307 | 4.25e-49 | 166 |
| MS.gene21596.t1 | AT4G03115 | 31.142 | 289 | 183 | 4 | 19 | 305 | 40 | 314 | 9.17e-46 | 157 |
| MS.gene21596.t1 | AT4G03115 | 31.142 | 289 | 183 | 4 | 19 | 305 | 72 | 346 | 2.64e-45 | 157 |
| MS.gene21596.t1 | AT5G09470 | 34.749 | 259 | 161 | 5 | 41 | 297 | 77 | 329 | 4.72e-44 | 153 |
| MS.gene21596.t1 | AT4G03115 | 31.641 | 256 | 161 | 3 | 50 | 305 | 2 | 243 | 2.68e-42 | 146 |
| MS.gene21596.t1 | AT5G19760 | 32.258 | 279 | 177 | 4 | 23 | 299 | 24 | 292 | 1.86e-41 | 145 |
| MS.gene21596.t1 | AT4G03115 | 31.746 | 252 | 158 | 3 | 54 | 305 | 14 | 251 | 1.89e-41 | 144 |
| MS.gene21596.t1 | AT5G58970 | 33.750 | 240 | 145 | 5 | 18 | 246 | 17 | 253 | 5.72e-38 | 135 |
| MS.gene21596.t1 | AT5G58970 | 26.064 | 188 | 135 | 3 | 115 | 298 | 17 | 204 | 1.76e-16 | 78.2 |
| MS.gene21596.t1 | AT1G25380 | 28.159 | 277 | 181 | 7 | 33 | 299 | 37 | 305 | 2.05e-26 | 107 |
| MS.gene21596.t1 | AT1G25380 | 28.159 | 277 | 181 | 7 | 33 | 299 | 37 | 305 | 2.05e-26 | 107 |
| MS.gene21596.t1 | AT5G01340 | 29.021 | 286 | 184 | 9 | 14 | 290 | 14 | 289 | 2.73e-26 | 105 |
| MS.gene21596.t1 | AT5G01340 | 27.320 | 194 | 125 | 5 | 107 | 296 | 12 | 193 | 8.95e-12 | 65.1 |
| MS.gene21596.t1 | AT2G47490 | 28.571 | 273 | 183 | 8 | 33 | 299 | 33 | 299 | 3.03e-25 | 103 |
| MS.gene21596.t1 | AT5G46800 | 27.174 | 276 | 187 | 6 | 33 | 297 | 24 | 296 | 1.77e-22 | 95.5 |
| MS.gene21596.t1 | AT5G46800 | 26.042 | 192 | 132 | 3 | 117 | 299 | 11 | 201 | 2.26e-15 | 75.5 |
| MS.gene21596.t1 | AT5G46800 | 27.174 | 276 | 187 | 6 | 33 | 297 | 24 | 296 | 1.77e-22 | 95.5 |
| MS.gene21596.t1 | AT5G46800 | 26.042 | 192 | 132 | 3 | 117 | 299 | 11 | 201 | 2.26e-15 | 75.5 |
| MS.gene21596.t1 | AT5G46800 | 27.174 | 276 | 187 | 6 | 33 | 297 | 24 | 296 | 1.77e-22 | 95.5 |
| MS.gene21596.t1 | AT5G46800 | 26.042 | 192 | 132 | 3 | 117 | 299 | 11 | 201 | 2.26e-15 | 75.5 |
| MS.gene21596.t1 | AT4G03115 | 28.283 | 198 | 127 | 3 | 19 | 214 | 40 | 224 | 1.89e-22 | 93.6 |
| MS.gene21596.t1 | AT4G03115 | 28.283 | 198 | 127 | 3 | 19 | 214 | 40 | 224 | 2.18e-22 | 93.6 |
| MS.gene21596.t1 | AT3G53940 | 23.567 | 314 | 212 | 6 | 2 | 299 | 58 | 359 | 1.17e-19 | 88.6 |
| MS.gene21596.t1 | AT1G79900 | 26.667 | 255 | 161 | 6 | 32 | 281 | 31 | 264 | 6.78e-19 | 85.5 |
| MS.gene21596.t1 | AT1G79900 | 30.769 | 182 | 109 | 3 | 33 | 211 | 126 | 293 | 8.03e-18 | 82.4 |
| MS.gene21596.t1 | AT5G61810 | 28.492 | 179 | 109 | 4 | 8 | 179 | 144 | 310 | 2.69e-18 | 84.3 |
| MS.gene21596.t1 | AT5G61810 | 24.315 | 292 | 196 | 8 | 12 | 298 | 59 | 330 | 6.22e-17 | 80.5 |
| MS.gene21596.t1 | AT4G01100 | 28.324 | 173 | 107 | 4 | 23 | 179 | 101 | 272 | 4.93e-18 | 83.2 |
| MS.gene21596.t1 | AT4G01100 | 19.802 | 303 | 212 | 6 | 26 | 303 | 1 | 297 | 9.58e-11 | 62.0 |
| MS.gene21596.t1 | AT2G37890 | 22.772 | 303 | 206 | 6 | 13 | 299 | 41 | 331 | 5.77e-18 | 83.2 |
| MS.gene21596.t1 | AT4G01100 | 28.324 | 173 | 107 | 4 | 23 | 179 | 165 | 336 | 6.53e-18 | 83.6 |
| MS.gene21596.t1 | AT5G61810 | 28.492 | 179 | 109 | 4 | 8 | 179 | 287 | 453 | 6.59e-18 | 84.3 |
| MS.gene21596.t1 | AT5G61810 | 24.242 | 297 | 200 | 8 | 12 | 303 | 202 | 478 | 2.63e-16 | 79.3 |
| MS.gene21596.t1 | AT4G01100 | 28.324 | 173 | 107 | 4 | 23 | 179 | 151 | 322 | 7.72e-18 | 83.2 |
| MS.gene21596.t1 | AT4G01100 | 20.462 | 303 | 208 | 7 | 26 | 302 | 51 | 346 | 6.36e-11 | 62.8 |
| MS.gene21596.t1 | AT4G32400 | 24.828 | 290 | 192 | 8 | 16 | 298 | 113 | 383 | 1.76e-17 | 82.4 |
| MS.gene21596.t1 | AT4G32400 | 26.178 | 191 | 129 | 4 | 18 | 205 | 208 | 389 | 1.43e-12 | 68.2 |
| MS.gene21596.t1 | AT3G21390 | 24.000 | 225 | 152 | 5 | 91 | 300 | 13 | 233 | 2.54e-17 | 81.6 |
| MS.gene21596.t1 | AT3G21390 | 25.325 | 308 | 188 | 10 | 22 | 294 | 46 | 346 | 1.30e-14 | 73.9 |
| MS.gene21596.t1 | AT3G21390 | 24.155 | 207 | 139 | 4 | 108 | 300 | 9 | 211 | 3.73e-17 | 80.9 |
| MS.gene21596.t1 | AT3G21390 | 25.243 | 309 | 187 | 11 | 22 | 294 | 24 | 324 | 1.14e-14 | 73.9 |
| MS.gene21596.t1 | AT5G51050 | 30.857 | 175 | 100 | 6 | 13 | 180 | 314 | 474 | 3.87e-17 | 82.0 |
| MS.gene21596.t1 | AT5G51050 | 24.476 | 286 | 187 | 9 | 22 | 298 | 228 | 493 | 1.37e-15 | 77.4 |
| MS.gene21596.t1 | AT5G07320 | 24.468 | 282 | 189 | 7 | 26 | 303 | 218 | 479 | 6.81e-17 | 81.3 |
| MS.gene21596.t1 | AT5G07320 | 28.415 | 183 | 110 | 6 | 4 | 180 | 288 | 455 | 8.77e-15 | 74.7 |
| MS.gene21596.t1 | AT5G48970 | 25.566 | 309 | 189 | 7 | 21 | 294 | 26 | 328 | 9.96e-17 | 79.7 |
| MS.gene21596.t1 | AT5G48970 | 25.253 | 198 | 132 | 4 | 114 | 299 | 22 | 215 | 1.36e-15 | 76.6 |
| MS.gene21596.t1 | AT1G34065 | 25.342 | 292 | 176 | 8 | 14 | 299 | 79 | 334 | 6.19e-16 | 77.8 |
| MS.gene21596.t1 | AT1G34065 | 26.027 | 292 | 174 | 9 | 14 | 299 | 72 | 327 | 6.27e-16 | 77.4 |
| MS.gene21596.t1 | AT3G55640 | 22.642 | 318 | 214 | 8 | 5 | 304 | 27 | 330 | 6.76e-16 | 77.4 |
| MS.gene21596.t1 | AT3G55640 | 22.642 | 318 | 214 | 8 | 5 | 304 | 27 | 330 | 6.76e-16 | 77.4 |
| MS.gene21596.t1 | AT2G33820 | 22.526 | 293 | 208 | 5 | 22 | 302 | 23 | 308 | 2.27e-15 | 75.5 |
| MS.gene21596.t1 | AT2G33820 | 26.316 | 190 | 131 | 6 | 113 | 297 | 16 | 201 | 4.93e-11 | 62.8 |
| MS.gene21596.t1 | AT1G14560 | 24.113 | 282 | 194 | 8 | 33 | 299 | 43 | 319 | 2.75e-15 | 75.5 |
| MS.gene21596.t1 | AT3G51870 | 20.141 | 283 | 200 | 5 | 28 | 304 | 102 | 364 | 5.01e-15 | 75.1 |
| MS.gene21596.t1 | AT5G42130 | 25.794 | 252 | 163 | 6 | 30 | 275 | 131 | 364 | 6.38e-15 | 75.1 |
| MS.gene21596.t1 | AT5G66380 | 25.694 | 288 | 177 | 11 | 34 | 299 | 27 | 299 | 8.01e-15 | 73.9 |
| MS.gene21596.t1 | AT5G66380 | 32.121 | 165 | 88 | 8 | 31 | 180 | 124 | 279 | 9.41e-12 | 65.1 |
| MS.gene21596.t1 | AT1G14560 | 25.869 | 259 | 168 | 9 | 33 | 276 | 43 | 292 | 1.28e-14 | 73.6 |
| MS.gene21596.t1 | AT1G14560 | 28.313 | 166 | 98 | 5 | 31 | 179 | 137 | 298 | 2.34e-12 | 67.0 |
| MS.gene21596.t1 | AT4G39460 | 25.993 | 277 | 173 | 5 | 23 | 298 | 64 | 309 | 2.34e-14 | 72.8 |
| MS.gene21596.t1 | AT4G39460 | 25.993 | 277 | 173 | 5 | 23 | 298 | 64 | 309 | 2.34e-14 | 72.8 |
| MS.gene21596.t1 | AT4G39460 | 25.993 | 277 | 173 | 5 | 23 | 298 | 64 | 309 | 2.34e-14 | 72.8 |
| MS.gene21596.t1 | AT5G13490 | 24.164 | 269 | 187 | 7 | 17 | 274 | 88 | 350 | 4.67e-13 | 69.3 |
| MS.gene21596.t1 | AT5G13490 | 28.090 | 178 | 118 | 3 | 32 | 205 | 208 | 379 | 2.91e-11 | 63.9 |
| MS.gene21596.t1 | AT5G13490 | 24.164 | 269 | 187 | 7 | 17 | 274 | 88 | 350 | 4.67e-13 | 69.3 |
| MS.gene21596.t1 | AT5G13490 | 28.090 | 178 | 118 | 3 | 32 | 205 | 208 | 379 | 2.91e-11 | 63.9 |
| MS.gene21596.t1 | AT2G33820 | 21.927 | 301 | 208 | 6 | 22 | 302 | 23 | 316 | 4.93e-13 | 68.9 |
| MS.gene21596.t1 | AT5G15640 | 23.510 | 302 | 177 | 11 | 32 | 302 | 43 | 321 | 1.05e-12 | 68.2 |
| MS.gene21596.t1 | AT5G15640 | 23.510 | 302 | 177 | 11 | 32 | 302 | 36 | 314 | 1.20e-12 | 67.8 |
| MS.gene21596.t1 | AT4G26180 | 22.973 | 296 | 193 | 11 | 1 | 276 | 1 | 281 | 1.51e-12 | 67.4 |
| MS.gene21596.t1 | AT1G14560 | 28.313 | 166 | 98 | 5 | 31 | 179 | 39 | 200 | 1.64e-12 | 66.2 |
| MS.gene21596.t1 | AT1G07030 | 23.675 | 283 | 201 | 6 | 21 | 299 | 44 | 315 | 2.86e-12 | 66.6 |
| MS.gene21596.t1 | AT1G07030 | 25.654 | 191 | 127 | 4 | 115 | 305 | 41 | 216 | 1.21e-11 | 64.7 |
| MS.gene21596.t1 | AT4G26180 | 22.973 | 296 | 193 | 11 | 1 | 276 | 1 | 281 | 3.09e-12 | 66.6 |
| MS.gene21596.t1 | AT4G11440 | 23.843 | 281 | 186 | 6 | 33 | 304 | 346 | 607 | 6.21e-12 | 66.6 |
| MS.gene21596.t1 | AT4G11440 | 27.273 | 165 | 103 | 5 | 23 | 180 | 428 | 582 | 1.45e-11 | 65.5 |
| MS.gene21596.t1 | AT4G11440 | 23.843 | 281 | 186 | 6 | 33 | 304 | 346 | 607 | 6.21e-12 | 66.6 |
| MS.gene21596.t1 | AT4G11440 | 27.273 | 165 | 103 | 5 | 23 | 180 | 428 | 582 | 1.45e-11 | 65.5 |
| MS.gene21596.t1 | AT4G28390 | 23.985 | 271 | 184 | 7 | 17 | 274 | 83 | 344 | 6.48e-12 | 65.9 |
| MS.gene21596.t1 | AT4G28390 | 26.786 | 168 | 115 | 4 | 115 | 275 | 84 | 250 | 8.86e-11 | 62.4 |
| MS.gene21596.t1 | AT4G28390 | 23.985 | 271 | 184 | 7 | 17 | 274 | 83 | 344 | 6.48e-12 | 65.9 |
| MS.gene21596.t1 | AT4G28390 | 26.786 | 168 | 115 | 4 | 115 | 275 | 84 | 250 | 8.86e-11 | 62.4 |
| MS.gene21596.t1 | AT2G17270 | 27.160 | 243 | 144 | 10 | 22 | 251 | 27 | 249 | 6.51e-12 | 65.5 |
| MS.gene21596.t1 | AT2G39970 | 21.014 | 276 | 186 | 6 | 31 | 275 | 22 | 296 | 6.96e-12 | 65.5 |
| MS.gene21596.t1 | AT5G48970 | 25.292 | 257 | 162 | 6 | 62 | 294 | 7 | 257 | 7.55e-12 | 65.1 |
| MS.gene21596.t1 | AT3G55640 | 23.834 | 193 | 133 | 4 | 115 | 299 | 39 | 225 | 9.98e-12 | 64.3 |
| MS.gene21596.t1 | AT3G55640 | 23.834 | 193 | 133 | 4 | 115 | 299 | 39 | 225 | 9.98e-12 | 64.3 |
| MS.gene21596.t1 | AT2G30160 | 26.630 | 184 | 122 | 3 | 115 | 298 | 43 | 213 | 1.14e-11 | 65.1 |
| MS.gene21596.t1 | AT5G01500 | 20.072 | 279 | 203 | 4 | 28 | 303 | 130 | 391 | 1.22e-11 | 65.5 |
| MS.gene21596.t1 | AT5G14040 | 23.986 | 296 | 188 | 8 | 22 | 304 | 87 | 358 | 1.43e-11 | 65.1 |
| MS.gene21596.t1 | AT3G53940 | 21.635 | 208 | 147 | 4 | 101 | 299 | 60 | 260 | 1.69e-11 | 64.3 |
| MS.gene21596.t1 | AT5G17400 | 22.400 | 250 | 182 | 5 | 33 | 274 | 30 | 275 | 2.73e-11 | 63.5 |
| MS.gene21596.t1 | AT2G33820 | 25.789 | 190 | 132 | 5 | 113 | 297 | 16 | 201 | 4.57e-11 | 62.8 |
| MS.gene21596.t1 | AT4G27940 | 21.450 | 331 | 195 | 8 | 16 | 284 | 64 | 391 | 5.08e-11 | 63.5 |
Find 95 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGGCTCTTTGGATATT+AGG | 0.207663 | 1.3:+63158819 | None:intergenic |
| GGTATTCAACCTCGGTATTC+AGG | 0.217370 | 1.3:-63158909 | MS.gene21596:CDS |
| GTCCGTGGCAATTTGTGTTC+TGG | 0.217832 | 1.3:-63158503 | MS.gene21596:CDS |
| AGGTCCTCTTGGTCTTTATA+AGG | 0.243262 | 1.3:-63160197 | MS.gene21596:CDS |
| TGCTGGGCTCTCTTCTTTCT+AGG | 0.261306 | 1.3:-63158454 | None:intergenic |
| GATGAATCAGGCAGCTAAAA+AGG | 0.273180 | 1.3:-63158634 | MS.gene21596:CDS |
| AATGGACCACCCTCTATTAT+TGG | 0.311443 | 1.3:-63160085 | MS.gene21596:CDS |
| AGTGTTATTTCTTCCGATAA+TGG | 0.328349 | 1.3:-63160103 | MS.gene21596:CDS |
| TGTTCACTAAGAAGGCTCTT+TGG | 0.330924 | 1.3:+63158811 | None:intergenic |
| TTGTTTAGCGTGATCATAAC+AGG | 0.343296 | 1.3:+63158776 | None:intergenic |
| CTGTTGATTGCCTGATTTCA+TGG | 0.359256 | 1.3:+63160399 | None:intergenic |
| TCCGTGGCAATTTGTGTTCT+GGG | 0.361223 | 1.3:-63158502 | MS.gene21596:CDS |
| AACAGGTGTCTAAGAATTGC+TGG | 0.373496 | 1.3:+63160166 | None:intergenic |
| TGTGGGGAAGAATCCTTTCC+AGG | 0.374087 | 1.3:+63158539 | None:intergenic |
| GGTCCTCTTGGTCTTTATAA+GGG | 0.374611 | 1.3:-63160196 | MS.gene21596:CDS |
| GCTGTTGTTGGTGGAATCTC+TGG | 0.388443 | 1.3:-63160058 | MS.gene21596:CDS |
| GTGAAGACTGTTAAAGTTGA+AGG | 0.391518 | 1.3:-63158573 | MS.gene21596:CDS |
| TACACACCTATTCGAATTGT+TGG | 0.393931 | 1.3:-63160142 | MS.gene21596:CDS |
| ATTATTGGCAAGGCTGTTGT+TGG | 0.411276 | 1.3:-63160070 | MS.gene21596:CDS |
| TTCGAATAGGTGTGTAGAAC+AGG | 0.411509 | 1.3:+63160149 | None:intergenic |
| ATTAAAGCTGAAGGATTTCA+AGG | 0.413857 | 1.3:-63158861 | MS.gene21596:CDS |
| TGGTGGAATCTCTGGCAGTA+TGG | 0.414492 | 1.3:-63160050 | MS.gene21596:CDS |
| CTCTCATCAACTCGTCCAAC+CGG | 0.418252 | 1.3:-63160256 | MS.gene21596:CDS |
| ACACACCTATTCGAATTGTT+GGG | 0.430490 | 1.3:-63160141 | MS.gene21596:CDS |
| GAGAAGTTTAGAAAATTTGC+TGG | 0.430860 | 1.3:-63158471 | MS.gene21596:CDS |
| TTCCCCACATGGGCAAGGCT+TGG | 0.433242 | 1.3:-63158525 | MS.gene21596:CDS |
| CATGAAATCAGGCAATCAAC+AGG | 0.441619 | 1.3:-63160398 | MS.gene21596:CDS |
| TTGTATGTACCCATGAAATC+AGG | 0.442452 | 1.3:-63160409 | None:intergenic |
| AACAAAATCATTAAAGCTGA+AGG | 0.442786 | 1.3:-63158870 | MS.gene21596:CDS |
| CCATAGACTTGATCAAAACT+AGG | 0.447982 | 1.3:-63160300 | MS.gene21596:CDS |
| CAAGACTAGAATGATGAATC+AGG | 0.448668 | 1.3:-63158646 | MS.gene21596:CDS |
| AATAGAGGGTGGTCCATTAT+CGG | 0.449525 | 1.3:+63160090 | None:intergenic |
| AACAGCCTTGCCAATAATAG+AGG | 0.458012 | 1.3:+63160075 | None:intergenic |
| CCAACCGGTGCATTTCGAAT+AGG | 0.474810 | 1.3:-63160241 | MS.gene21596:CDS |
| TAGAAGCTCTTATGATTGCT+TGG | 0.474971 | 1.3:-63158595 | MS.gene21596:CDS |
| GATAGTCAAATGATGAGAAA+AGG | 0.492159 | 1.3:-63158930 | MS.gene21596:CDS |
| GTATTCAACCTCGGTATTCA+GGG | 0.495519 | 1.3:-63158908 | MS.gene21596:CDS |
| TCATACCCAACAATTCGAAT+AGG | 0.500273 | 1.3:+63160136 | None:intergenic |
| CTCACCTTGACAAGATCAGC+CGG | 0.501511 | 1.3:+63158963 | None:intergenic |
| ATTCGTGAACAAGGTCCTCT+TGG | 0.501888 | 1.3:-63160208 | MS.gene21596:CDS |
| CTAGTCTTGACAACGTCGGC+TGG | 0.509654 | 1.3:+63158660 | None:intergenic |
| TTGTTGGGTATGAGCACCTC+AGG | 0.513241 | 1.3:-63160126 | MS.gene21596:CDS |
| AAAACTAGGCTTCAACTCCA+TGG | 0.514890 | 1.3:-63160286 | MS.gene21596:CDS |
| AAGAGCCTTCTTAGTGAACA+TGG | 0.517766 | 1.3:-63158808 | MS.gene21596:CDS |
| ACTAACATCATTATCGGCAA+TGG | 0.521097 | 1.3:-63160344 | MS.gene21596:CDS |
| ACATTAGCTTCCATCATGTC+AGG | 0.524522 | 1.3:-63158708 | MS.gene21596:CDS |
| AAACTAGGCTTCAACTCCAT+GGG | 0.527400 | 1.3:-63160285 | MS.gene21596:CDS |
| TATGGGGAAAGTTGTGGACT+CGG | 0.536807 | 1.3:+63160318 | None:intergenic |
| TGTTGATTGCCTGATTTCAT+GGG | 0.542008 | 1.3:+63160400 | None:intergenic |
| AGAAGTTTAGAAAATTTGCT+GGG | 0.542066 | 1.3:-63158470 | MS.gene21596:CDS |
| TTCCATCATGTCAGGTCTTG+CGG | 0.542079 | 1.3:-63158700 | MS.gene21596:CDS |
| AATCTCTGGCAGTATGGCTC+AGG | 0.544027 | 1.3:-63160044 | MS.gene21596:intron |
| AGTACAGGTTATAGCAAGCC+CGG | 0.545462 | 1.3:-63158982 | MS.gene21596:intron |
| GGAATAAGAGCACCCTGGAA+AGG | 0.548680 | 1.3:-63158552 | MS.gene21596:CDS |
| TGCCGCAAGACCTGACATGA+TGG | 0.548886 | 1.3:+63158698 | None:intergenic |
| ATTGGCAAGGCTGTTGTTGG+TGG | 0.554471 | 1.3:-63160067 | MS.gene21596:CDS |
| GATTCTTCCCCACATGGGCA+AGG | 0.557802 | 1.3:-63158530 | MS.gene21596:CDS |
| CGGACCAAGCCTTGCCCATG+TGG | 0.564025 | 1.3:+63158521 | None:intergenic |
| AGGATTTCAAGGACTGTGGA+AGG | 0.566008 | 1.3:-63158850 | MS.gene21596:CDS |
| GGAAAGGATTCTTCCCCACA+TGG | 0.581691 | 1.3:-63158536 | MS.gene21596:CDS |
| CCTATTCGAAATGCACCGGT+TGG | 0.586369 | 1.3:+63160241 | None:intergenic |
| GACCAAGCCTTGCCCATGTG+GGG | 0.588505 | 1.3:+63158523 | None:intergenic |
| CATGGGCAAGGCTTGGTCCG+TGG | 0.592432 | 1.3:-63158518 | MS.gene21596:CDS |
| AACATCATTATCGGCAATGG+TGG | 0.595880 | 1.3:-63160341 | MS.gene21596:CDS |
| TACGCCTATTCGAAATGCAC+CGG | 0.596633 | 1.3:+63160237 | None:intergenic |
| CAAGTCTATGGGGAAAGTTG+TGG | 0.599944 | 1.3:+63160312 | None:intergenic |
| CGGCTGATCTTGTCAAGGTG+AGG | 0.604258 | 1.3:-63158962 | MS.gene21596:CDS |
| GGACCAAGCCTTGCCCATGT+GGG | 0.604525 | 1.3:+63158522 | None:intergenic |
| TCACCTTGACAAGATCAGCC+GGG | 0.604841 | 1.3:+63158964 | None:intergenic |
| GTGGGGAAGAATCCTTTCCA+GGG | 0.610495 | 1.3:+63158540 | None:intergenic |
| ACCACCCTCTATTATTGGCA+AGG | 0.614676 | 1.3:-63160080 | MS.gene21596:CDS |
| GAGCCTTCTTAGTGAACATG+GGG | 0.615946 | 1.3:-63158806 | MS.gene21596:CDS |
| CTGAAGGATTTCAAGGACTG+TGG | 0.616907 | 1.3:-63158854 | MS.gene21596:CDS |
| AGAGCCTTCTTAGTGAACAT+GGG | 0.617274 | 1.3:-63158807 | MS.gene21596:CDS |
| TTGATGAGAGTGACTCCCCA+TGG | 0.622723 | 1.3:+63160269 | None:intergenic |
| ACCCAGAACACAAATTGCCA+CGG | 0.626367 | 1.3:+63158501 | None:intergenic |
| GGATTTCAAGGACTGTGGAA+GGG | 0.631072 | 1.3:-63158849 | MS.gene21596:CDS |
| ATGAAATCAGGCAATCAACA+GGG | 0.649581 | 1.3:-63160397 | MS.gene21596:CDS |
| TATTAAAAGTAAGATAGCTG+AGG | 0.649871 | 1.3:-63158748 | MS.gene21596:CDS |
| TTGAAGGAATAAGAGCACCC+TGG | 0.653386 | 1.3:-63158557 | MS.gene21596:CDS |
| ACAGCCTTGCCAATAATAGA+GGG | 0.656484 | 1.3:+63160076 | None:intergenic |
| CGGAAGAAATAACACTCCTG+AGG | 0.669468 | 1.3:+63160110 | None:intergenic |
| TGAGAAAAGGTATTCAACCT+CGG | 0.670567 | 1.3:-63158917 | MS.gene21596:CDS |
| AAGCCCTTATAAAGACCAAG+AGG | 0.670932 | 1.3:+63160193 | None:intergenic |
| GTAGACATTATTCGTGAACA+AGG | 0.674981 | 1.3:-63160217 | MS.gene21596:CDS |
| GAAAGGATTCTTCCCCACAT+GGG | 0.675704 | 1.3:-63158535 | MS.gene21596:CDS |
| GCCTTGCCAATAATAGAGGG+TGG | 0.679136 | 1.3:+63160079 | None:intergenic |
| AACTAGGCTTCAACTCCATG+GGG | 0.680015 | 1.3:-63160284 | MS.gene21596:CDS |
| AAGCCCGGCTGATCTTGTCA+AGG | 0.681297 | 1.3:-63158967 | MS.gene21596:CDS |
| CATGATGGAAGCTAATGTGT+GGG | 0.692601 | 1.3:+63158713 | None:intergenic |
| CATTCTAGTCTTGACAACGT+CGG | 0.705215 | 1.3:+63158656 | None:intergenic |
| AAATCAGGCAATCAACAGGG+TGG | 0.710195 | 1.3:-63160394 | MS.gene21596:CDS |
| ACATGATGGAAGCTAATGTG+TGG | 0.716855 | 1.3:+63158712 | None:intergenic |
| TCAAATGGCCCTGAATACCG+AGG | 0.724190 | 1.3:+63158900 | None:intergenic |
| AGCCTTCTTAGTGAACATGG+GGG | 0.797499 | 1.3:-63158805 | MS.gene21596:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAGATTATTATATATTTAA+AGG | - | chr1.3:63158980-63158999 | MS.gene21596:intron | 10.0% |
| !! | GAAATAAAATATTAGGATTA+TGG | - | chr1.3:63159611-63159630 | MS.gene21596:intron | 15.0% |
| !!! | AATCAGAATTTTATAACAAA+AGG | + | chr1.3:63159391-63159410 | None:intergenic | 15.0% |
| !!! | ATTTTATGATTTTAACACAA+TGG | + | chr1.3:63159719-63159738 | None:intergenic | 15.0% |
| !! | TTATTTACAATTAGTAGTAC+AGG | - | chr1.3:63159855-63159874 | MS.gene21596:intron | 20.0% |
| !!! | ACTGTAACTTAACTATTTTT+TGG | + | chr1.3:63159039-63159058 | None:intergenic | 20.0% |
| !!! | ATTTTGTTAAAAGCATCAAA+TGG | + | chr1.3:63159970-63159989 | None:intergenic | 20.0% |
| !!! | GAAACTAAAATCCTTTAAAA+AGG | - | chr1.3:63159508-63159527 | MS.gene21596:intron | 20.0% |
| !!! | GATTTTACTAACATCATTAT+CGG | - | chr1.3:63158502-63158521 | MS.gene21596:CDS | 20.0% |
| !!! | TCATAAAATGCAATTTTTCA+AGG | - | chr1.3:63159730-63159749 | MS.gene21596:intron | 20.0% |
| !!! | TTTTACTATGTTCATAAATC+CGG | + | chr1.3:63159145-63159164 | None:intergenic | 20.0% |
| !!! | TTTTAGTTTCCTAAGTTTTT+TGG | + | chr1.3:63159498-63159517 | None:intergenic | 20.0% |
| !!! | TTTTCCAAAGACAAATATAA+AGG | + | chr1.3:63159815-63159834 | None:intergenic | 20.0% |
| ! | AACAAAATCATTAAAGCTGA+AGG | - | chr1.3:63159982-63160001 | MS.gene21596:intron | 25.0% |
| ! | AGAGGTGGAAATAAAATATT+AGG | - | chr1.3:63159604-63159623 | MS.gene21596:intron | 25.0% |
| ! | ATGTTTATCTTAGTTACTAG+TGG | - | chr1.3:63159259-63159278 | MS.gene21596:intron | 25.0% |
| ! | TATTAAAAGTAAGATAGCTG+AGG | - | chr1.3:63160104-63160123 | MS.gene21596:CDS | 25.0% |
| ! | TGTTTATCTTAGTTACTAGT+GGG | - | chr1.3:63159260-63159279 | MS.gene21596:intron | 25.0% |
| ! | TTAGTAAAGCTTATGCTTAA+GGG | + | chr1.3:63159422-63159441 | None:intergenic | 25.0% |
| !! | AAATTTTCTAAACTTCTCGT+AGG | + | chr1.3:63160379-63160398 | None:intergenic | 25.0% |
| !! | AGAAGTTTAGAAAATTTGCT+GGG | - | chr1.3:63160382-63160401 | MS.gene21596:CDS | 25.0% |
| !! | CAATTGATTGATTCACTATT+AGG | - | chr1.3:63159203-63159222 | MS.gene21596:intron | 25.0% |
| ATTAAAGCTGAAGGATTTCA+AGG | - | chr1.3:63159991-63160010 | MS.gene21596:intron | 30.0% | |
| ATTGGTTGTCTAACATTTGT+GGG | + | chr1.3:63159470-63159489 | None:intergenic | 30.0% | |
| CAATCTCAACCAAAAAACTT+AGG | - | chr1.3:63159486-63159505 | MS.gene21596:intron | 30.0% | |
| CTCACCTTTATATTTGTCTT+TGG | - | chr1.3:63159808-63159827 | MS.gene21596:intron | 30.0% | |
| CTTAGTAAAGCTTATGCTTA+AGG | + | chr1.3:63159423-63159442 | None:intergenic | 30.0% | |
| GAACATAGTAAAAGAATGTG+TGG | - | chr1.3:63159152-63159171 | MS.gene21596:intron | 30.0% | |
| GAGAAGTTTAGAAAATTTGC+TGG | - | chr1.3:63160381-63160400 | MS.gene21596:CDS | 30.0% | |
| GATAGTCAAATGATGAGAAA+AGG | - | chr1.3:63159922-63159941 | MS.gene21596:intron | 30.0% | |
| GTTTAACTATTAGCATCTCA+TGG | + | chr1.3:63159662-63159681 | None:intergenic | 30.0% | |
| GTTTATCTTAGTTACTAGTG+GGG | - | chr1.3:63159261-63159280 | MS.gene21596:intron | 30.0% | |
| ! | TGATTGATTCACTATTAGGT+AGG | - | chr1.3:63159207-63159226 | MS.gene21596:intron | 30.0% |
| !! | AGTGTTATTTCTTCCGATAA+TGG | - | chr1.3:63158749-63158768 | MS.gene21596:CDS | 30.0% |
| !!! | ACTTAACTATTTTTTGGTCC+AGG | + | chr1.3:63159033-63159052 | None:intergenic | 30.0% |
| !!! | CTAAGTTTTTTGGTTGAGAT+TGG | + | chr1.3:63159488-63159507 | None:intergenic | 30.0% |
| !!! | CTAGTTTTGATCAAGTCTAT+GGG | + | chr1.3:63158554-63158573 | None:intergenic | 30.0% |
| !!! | TAGTTTTGATCAAGTCTATG+GGG | + | chr1.3:63158553-63158572 | None:intergenic | 30.0% |
| AAGAAGGCTCTTTGGATATT+AGG | + | chr1.3:63160036-63160055 | None:intergenic | 35.0% | |
| ACACACCTATTCGAATTGTT+GGG | - | chr1.3:63158711-63158730 | MS.gene21596:CDS | 35.0% | |
| ACTAACATCATTATCGGCAA+TGG | - | chr1.3:63158508-63158527 | MS.gene21596:CDS | 35.0% | |
| ATCTTTCAAAATCTCACACC+TGG | - | chr1.3:63159570-63159589 | MS.gene21596:intron | 35.0% | |
| ATGAAATCAGGCAATCAACA+GGG | - | chr1.3:63158455-63158474 | MS.gene21596:CDS | 35.0% | |
| CAAGACTAGAATGATGAATC+AGG | - | chr1.3:63160206-63160225 | MS.gene21596:CDS | 35.0% | |
| CCATAGACTTGATCAAAACT+AGG | - | chr1.3:63158552-63158571 | MS.gene21596:CDS | 35.0% | |
| GGATAAAAGTTCCAAGATTC+AGG | - | chr1.3:63159001-63159020 | MS.gene21596:intron | 35.0% | |
| GTAGACATTATTCGTGAACA+AGG | - | chr1.3:63158635-63158654 | MS.gene21596:CDS | 35.0% | |
| GTCGAAAAACACAAAACTCA+TGG | + | chr1.3:63159237-63159256 | None:intergenic | 35.0% | |
| GTGAAGACTGTTAAAGTTGA+AGG | - | chr1.3:63160279-63160298 | MS.gene21596:CDS | 35.0% | |
| TACACACCTATTCGAATTGT+TGG | - | chr1.3:63158710-63158729 | MS.gene21596:CDS | 35.0% | |
| TAGAAGCTCTTATGATTGCT+TGG | - | chr1.3:63160257-63160276 | MS.gene21596:CDS | 35.0% | |
| TCATACCCAACAATTCGAAT+AGG | + | chr1.3:63158719-63158738 | None:intergenic | 35.0% | |
| TGGATTCATCTCCAAAGTTA+CGG | + | chr1.3:63159773-63159792 | None:intergenic | 35.0% | |
| TTGTTTAGCGTGATCATAAC+AGG | + | chr1.3:63160079-63160098 | None:intergenic | 35.0% | |
| ! | GATTGGTTGTCTAACATTTG+TGG | + | chr1.3:63159471-63159490 | None:intergenic | 35.0% |
| !! | TGAGAAAAGGTATTCAACCT+CGG | - | chr1.3:63159935-63159954 | MS.gene21596:intron | 35.0% |
| !!! | CCTAGTTTTGATCAAGTCTA+TGG | + | chr1.3:63158555-63158574 | None:intergenic | 35.0% |
| AAAACTAGGCTTCAACTCCA+TGG | - | chr1.3:63158566-63158585 | MS.gene21596:CDS | 40.0% | |
| AAACTAGGCTTCAACTCCAT+GGG | - | chr1.3:63158567-63158586 | MS.gene21596:CDS | 40.0% | |
| AACAGCCTTGCCAATAATAG+AGG | + | chr1.3:63158780-63158799 | None:intergenic | 40.0% | |
| AACAGGTGTCTAAGAATTGC+TGG | + | chr1.3:63158689-63158708 | None:intergenic | 40.0% | |
| AACATCATTATCGGCAATGG+TGG | - | chr1.3:63158511-63158530 | MS.gene21596:CDS | 40.0% | |
| AAGAGCCTTCTTAGTGAACA+TGG | - | chr1.3:63160044-63160063 | MS.gene21596:intron | 40.0% | |
| AAGCCCTTATAAAGACCAAG+AGG | + | chr1.3:63158662-63158681 | None:intergenic | 40.0% | |
| AATAGAGGGTGGTCCATTAT+CGG | + | chr1.3:63158765-63158784 | None:intergenic | 40.0% | |
| AATCAGGCAGCTAAAAAGGA+AGG | - | chr1.3:63160222-63160241 | MS.gene21596:CDS | 40.0% | |
| AATGGACCACCCTCTATTAT+TGG | - | chr1.3:63158767-63158786 | MS.gene21596:CDS | 40.0% | |
| ACAGCCTTGCCAATAATAGA+GGG | + | chr1.3:63158779-63158798 | None:intergenic | 40.0% | |
| AGAGCCTTCTTAGTGAACAT+GGG | - | chr1.3:63160045-63160064 | MS.gene21596:CDS | 40.0% | |
| ATCAGGCAGCTAAAAAGGAA+GGG | - | chr1.3:63160223-63160242 | MS.gene21596:CDS | 40.0% | |
| ATGTTCATAAATCCGGCAGA+TGG | + | chr1.3:63159138-63159157 | None:intergenic | 40.0% | |
| ATTATTGGCAAGGCTGTTGT+TGG | - | chr1.3:63158782-63158801 | MS.gene21596:CDS | 40.0% | |
| GATGAATCAGGCAGCTAAAA+AGG | - | chr1.3:63160218-63160237 | MS.gene21596:CDS | 40.0% | |
| GTATTCAACCTCGGTATTCA+GGG | - | chr1.3:63159944-63159963 | MS.gene21596:intron | 40.0% | |
| GTGAGCAGTCAGTTAAAACA+TGG | + | chr1.3:63159793-63159812 | None:intergenic | 40.0% | |
| TGTTCACTAAGAAGGCTCTT+TGG | + | chr1.3:63160044-63160063 | None:intergenic | 40.0% | |
| TTCGAATAGGTGTGTAGAAC+AGG | + | chr1.3:63158706-63158725 | None:intergenic | 40.0% | |
| TTTCCAATGCACCGTAACTT+TGG | - | chr1.3:63159759-63159778 | MS.gene21596:intron | 40.0% | |
| ! | ACACGCGTACACCTTTTTAA+AGG | + | chr1.3:63159522-63159541 | None:intergenic | 40.0% |
| ! | ACATGATGGAAGCTAATGTG+TGG | + | chr1.3:63160143-63160162 | None:intergenic | 40.0% |
| ! | ACATTAGCTTCCATCATGTC+AGG | - | chr1.3:63160144-63160163 | MS.gene21596:CDS | 40.0% |
| ! | AGGTCCTCTTGGTCTTTATA+AGG | - | chr1.3:63158655-63158674 | MS.gene21596:CDS | 40.0% |
| ! | CATGATGGAAGCTAATGTGT+GGG | + | chr1.3:63160142-63160161 | None:intergenic | 40.0% |
| ! | GGTCCTCTTGGTCTTTATAA+GGG | - | chr1.3:63158656-63158675 | MS.gene21596:CDS | 40.0% |
| ! | GTGGGTTGCTAATTGTAACA+AGG | + | chr1.3:63159452-63159471 | None:intergenic | 40.0% |
| !! | CAGATGGTGTTCTTTGAAGT+TGG | + | chr1.3:63159122-63159141 | None:intergenic | 40.0% |
| !! | CATTCTAGTCTTGACAACGT+CGG | + | chr1.3:63160199-63160218 | None:intergenic | 40.0% |
| !! | TGGTGTTCTTTGAAGTTGGA+AGG | + | chr1.3:63159118-63159137 | None:intergenic | 40.0% |
| AAATCAGGCAATCAACAGGG+TGG | - | chr1.3:63158458-63158477 | MS.gene21596:CDS | 45.0% | |
| AACTAGGCTTCAACTCCATG+GGG | - | chr1.3:63158568-63158587 | MS.gene21596:CDS | 45.0% | |
| ACCACCCTCTATTATTGGCA+AGG | - | chr1.3:63158772-63158791 | MS.gene21596:CDS | 45.0% | |
| ACCCAGAACACAAATTGCCA+CGG | + | chr1.3:63160354-63160373 | None:intergenic | 45.0% | |
| AGCCTTCTTAGTGAACATGG+GGG | - | chr1.3:63160047-63160066 | MS.gene21596:CDS | 45.0% | |
| AGGATTTCAAGGACTGTGGA+AGG | - | chr1.3:63160002-63160021 | MS.gene21596:intron | 45.0% | |
| AGTACAGGTTATAGCAAGCC+CGG | - | chr1.3:63159870-63159889 | MS.gene21596:intron | 45.0% | |
| ATACAAGAGACTGACCGACT+AGG | + | chr1.3:63159291-63159310 | None:intergenic | 45.0% | |
| ATTCGTGAACAAGGTCCTCT+TGG | - | chr1.3:63158644-63158663 | MS.gene21596:CDS | 45.0% | |
| CAAGTCTATGGGGAAAGTTG+TGG | + | chr1.3:63158543-63158562 | None:intergenic | 45.0% | |
| CGGAAGAAATAACACTCCTG+AGG | + | chr1.3:63158745-63158764 | None:intergenic | 45.0% | |
| CTGAAGGATTTCAAGGACTG+TGG | - | chr1.3:63159998-63160017 | MS.gene21596:intron | 45.0% | |
| CTTCAAAGAACACCATCTGC+CGG | - | chr1.3:63159123-63159142 | MS.gene21596:intron | 45.0% | |
| GAAAGGATTCTTCCCCACAT+GGG | - | chr1.3:63160317-63160336 | MS.gene21596:CDS | 45.0% | |
| GAGCCTTCTTAGTGAACATG+GGG | - | chr1.3:63160046-63160065 | MS.gene21596:CDS | 45.0% | |
| GGATTTCAAGGACTGTGGAA+GGG | - | chr1.3:63160003-63160022 | MS.gene21596:intron | 45.0% | |
| GGTATTCAACCTCGGTATTC+AGG | - | chr1.3:63159943-63159962 | MS.gene21596:intron | 45.0% | |
| TACGCCTATTCGAAATGCAC+CGG | + | chr1.3:63158618-63158637 | None:intergenic | 45.0% | |
| TATGGGGAAAGTTGTGGACT+CGG | + | chr1.3:63158537-63158556 | None:intergenic | 45.0% | |
| TCCGTGGCAATTTGTGTTCT+GGG | - | chr1.3:63160350-63160369 | MS.gene21596:CDS | 45.0% | |
| TCTCCAAAGTTACGGTGCAT+TGG | + | chr1.3:63159765-63159784 | None:intergenic | 45.0% | |
| TGGCTCAGGTGAGAATTACA+TGG | - | chr1.3:63158822-63158841 | MS.gene21596:CDS | 45.0% | |
| TTCCATCATGTCAGGTCTTG+CGG | - | chr1.3:63160152-63160171 | MS.gene21596:CDS | 45.0% | |
| TTCCCCCATGTTCACTAAGA+AGG | + | chr1.3:63160052-63160071 | None:intergenic | 45.0% | |
| !! | TTGAAGGAATAAGAGCACCC+TGG | - | chr1.3:63160295-63160314 | MS.gene21596:CDS | 45.0% |
| AATCCCTAGACCAAGGACCA+AGG | + | chr1.3:63159331-63159350 | None:intergenic | 50.0% | |
| AATCTCTGGCAGTATGGCTC+AGG | - | chr1.3:63158808-63158827 | MS.gene21596:CDS | 50.0% | |
| ACATAACGTCTGCCTTGCCT+TGG | - | chr1.3:63159311-63159330 | MS.gene21596:intron | 50.0% | |
| ATTGGCAAGGCTGTTGTTGG+TGG | - | chr1.3:63158785-63158804 | MS.gene21596:CDS | 50.0% | |
| CCAACCGGTGCATTTCGAAT+AGG | - | chr1.3:63158611-63158630 | MS.gene21596:CDS | 50.0% | |
| CTCACCTTGACAAGATCAGC+CGG | + | chr1.3:63159892-63159911 | None:intergenic | 50.0% | |
| CTCTCATCAACTCGTCCAAC+CGG | - | chr1.3:63158596-63158615 | MS.gene21596:CDS | 50.0% | |
| GCCTTGCCAATAATAGAGGG+TGG | + | chr1.3:63158776-63158795 | None:intergenic | 50.0% | |
| GGAAAGGATTCTTCCCCACA+TGG | - | chr1.3:63160316-63160335 | MS.gene21596:CDS | 50.0% | |
| GTCCGTGGCAATTTGTGTTC+TGG | - | chr1.3:63160349-63160368 | MS.gene21596:CDS | 50.0% | |
| GTGGGGAAGAATCCTTTCCA+GGG | + | chr1.3:63160315-63160334 | None:intergenic | 50.0% | |
| TCAAATGGCCCTGAATACCG+AGG | + | chr1.3:63159955-63159974 | None:intergenic | 50.0% | |
| TCACCTTGACAAGATCAGCC+GGG | + | chr1.3:63159891-63159910 | None:intergenic | 50.0% | |
| TGGTCCTTGGTCTAGGGATT+CGG | - | chr1.3:63159331-63159350 | MS.gene21596:intron | 50.0% | |
| TGGTGGAATCTCTGGCAGTA+TGG | - | chr1.3:63158802-63158821 | MS.gene21596:CDS | 50.0% | |
| TGTGGGGAAGAATCCTTTCC+AGG | + | chr1.3:63160316-63160335 | None:intergenic | 50.0% | |
| TTGATGAGAGTGACTCCCCA+TGG | + | chr1.3:63158586-63158605 | None:intergenic | 50.0% | |
| TTGCCTTGGTCCTTGGTCTA+GGG | - | chr1.3:63159325-63159344 | MS.gene21596:intron | 50.0% | |
| TTGTTGGGTATGAGCACCTC+AGG | - | chr1.3:63158726-63158745 | MS.gene21596:CDS | 50.0% | |
| ! | CCTATTCGAAATGCACCGGT+TGG | + | chr1.3:63158614-63158633 | None:intergenic | 50.0% |
| ! | GCTGTTGTTGGTGGAATCTC+TGG | - | chr1.3:63158794-63158813 | MS.gene21596:CDS | 50.0% |
| !! | ACTAGTGGGGTTAGCCTAGT+CGG | - | chr1.3:63159274-63159293 | MS.gene21596:intron | 50.0% |
| !! | GGAATAAGAGCACCCTGGAA+AGG | - | chr1.3:63160300-63160319 | MS.gene21596:CDS | 50.0% |
| AAGCCCGGCTGATCTTGTCA+AGG | - | chr1.3:63159885-63159904 | MS.gene21596:intron | 55.0% | |
| CCAAGATTCAGGCTTGAGCC+TGG | - | chr1.3:63159012-63159031 | MS.gene21596:intron | 55.0% | |
| CCAGGCTCAAGCCTGAATCT+TGG | + | chr1.3:63159015-63159034 | None:intergenic | 55.0% | |
| CGCGTGCAAAGCTCTCACAT+AGG | + | chr1.3:63159357-63159376 | None:intergenic | 55.0% | |
| CGGCTGATCTTGTCAAGGTG+AGG | - | chr1.3:63159890-63159909 | MS.gene21596:intron | 55.0% | |
| CTAGACCAAGGACCAAGGCA+AGG | + | chr1.3:63159326-63159345 | None:intergenic | 55.0% | |
| CTTGCCTTGGTCCTTGGTCT+AGG | - | chr1.3:63159324-63159343 | MS.gene21596:intron | 55.0% | |
| GAGAGCTTTGCACGCGTTTC+TGG | - | chr1.3:63159361-63159380 | MS.gene21596:intron | 55.0% | |
| GATTCTTCCCCACATGGGCA+AGG | - | chr1.3:63160322-63160341 | MS.gene21596:CDS | 55.0% | |
| TAGGCCGAATCCCTAGACCA+AGG | + | chr1.3:63159338-63159357 | None:intergenic | 55.0% | |
| TCTCACACCTGGTCTCATGC+TGG | - | chr1.3:63159581-63159600 | MS.gene21596:intron | 55.0% | |
| TGCCGCAAGACCTGACATGA+TGG | + | chr1.3:63160157-63160176 | None:intergenic | 55.0% | |
| !! | CTAGTCTTGACAACGTCGGC+TGG | + | chr1.3:63160195-63160214 | None:intergenic | 55.0% |
| CACCTCTCCAGCATGAGACC+AGG | + | chr1.3:63159591-63159610 | None:intergenic | 60.0% | |
| CACCTGGTCTCATGCTGGAG+AGG | - | chr1.3:63159586-63159605 | MS.gene21596:intron | 60.0% | |
| CTGGTCTCATGCTGGAGAGG+TGG | - | chr1.3:63159589-63159608 | MS.gene21596:intron | 60.0% | |
| GACCAAGCCTTGCCCATGTG+GGG | + | chr1.3:63160332-63160351 | None:intergenic | 60.0% | |
| GGACCAAGCCTTGCCCATGT+GGG | + | chr1.3:63160333-63160352 | None:intergenic | 60.0% | |
| GTCTGCCTTGCCTTGGTCCT+TGG | - | chr1.3:63159318-63159337 | MS.gene21596:intron | 60.0% | |
| TTCCCCACATGGGCAAGGCT+TGG | - | chr1.3:63160327-63160346 | MS.gene21596:CDS | 60.0% | |
| CGGACCAAGCCTTGCCCATG+TGG | + | chr1.3:63160334-63160353 | None:intergenic | 65.0% | |
| ! | CATGGGCAAGGCTTGGTCCG+TGG | - | chr1.3:63160334-63160353 | MS.gene21596:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 63158455 | 63160419 | 63158455 | ID=MS.gene21596 |
| chr1.3 | mRNA | 63158455 | 63160419 | 63158455 | ID=MS.gene21596.t1;Parent=MS.gene21596 |
| chr1.3 | exon | 63160045 | 63160419 | 63160045 | ID=MS.gene21596.t1.exon1;Parent=MS.gene21596.t1 |
| chr1.3 | CDS | 63160045 | 63160419 | 63160045 | ID=cds.MS.gene21596.t1;Parent=MS.gene21596.t1 |
| chr1.3 | exon | 63158455 | 63158997 | 63158455 | ID=MS.gene21596.t1.exon2;Parent=MS.gene21596.t1 |
| chr1.3 | CDS | 63158455 | 63158997 | 63158455 | ID=cds.MS.gene21596.t1;Parent=MS.gene21596.t1 |
| Gene Sequence |
| Protein sequence |
