Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83326.t1 | XP_013463932.1 | 99.7 | 348 | 1 | 0 | 1 | 348 | 1 | 348 | 1.00E-205 | 725.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83326.t1 | Q9Y3F4 | 50.9 | 291 | 140 | 2 | 9 | 299 | 7 | 294 | 1.0e-84 | 315.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83326.t1 | A0A072V826 | 99.7 | 348 | 1 | 0 | 1 | 348 | 1 | 348 | 7.4e-206 | 725.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene83326 | -0.805273 | 1.45E-49 | -1.69E-46 |
| MS.gene049411 | MS.gene83326 | 0.803062 | 4.17E-49 | -1.69E-46 |
| MS.gene049580 | MS.gene83326 | 0.848315 | 6.63E-60 | -1.69E-46 |
| MS.gene049680 | MS.gene83326 | 0.815333 | 9.75E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene83326 | 0.837742 | 4.34E-57 | -1.69E-46 |
| MS.gene049873 | MS.gene83326 | 0.815843 | 7.51E-52 | -1.69E-46 |
| MS.gene050752 | MS.gene83326 | 0.83516 | 1.97E-56 | -1.69E-46 |
| MS.gene050955 | MS.gene83326 | 0.844062 | 9.54E-59 | -1.69E-46 |
| MS.gene051003 | MS.gene83326 | 0.829842 | 4.10E-55 | -1.69E-46 |
| MS.gene051234 | MS.gene83326 | 0.809654 | 1.70E-50 | -1.69E-46 |
| MS.gene05188 | MS.gene83326 | 0.804993 | 1.65E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene83326 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene83326 | 0.817357 | 3.44E-52 | -1.69E-46 |
| MS.gene052072 | MS.gene83326 | 0.820529 | 6.54E-53 | -1.69E-46 |
| MS.gene052479 | MS.gene83326 | 0.827423 | 1.58E-54 | -1.69E-46 |
| MS.gene052818 | MS.gene83326 | -0.803089 | 4.12E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene83326 | 0.840176 | 1.02E-57 | -1.69E-46 |
| MS.gene053045 | MS.gene83326 | 0.805826 | 1.11E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene83326 | 0.800016 | 1.76E-48 | -1.69E-46 |
| MS.gene053401 | MS.gene83326 | 0.807412 | 5.12E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene83326 | 0.800707 | 1.27E-48 | -1.69E-46 |
| MS.gene054403 | MS.gene83326 | 0.840688 | 7.48E-58 | -1.69E-46 |
| MS.gene05548 | MS.gene83326 | 0.818368 | 2.03E-52 | -1.69E-46 |
| MS.gene055555 | MS.gene83326 | 0.895833 | 6.58E-76 | -1.69E-46 |
| MS.gene056075 | MS.gene83326 | 0.805842 | 1.10E-49 | -1.69E-46 |
| MS.gene056091 | MS.gene83326 | 0.806448 | 8.18E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene83326 | 0.831976 | 1.23E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene83326 | 0.851878 | 6.66E-61 | -1.69E-46 |
| MS.gene057694 | MS.gene83326 | 0.800354 | 1.50E-48 | -1.69E-46 |
| MS.gene057705 | MS.gene83326 | 0.863369 | 2.61E-64 | -1.69E-46 |
| MS.gene05781 | MS.gene83326 | 0.815728 | 7.97E-52 | -1.69E-46 |
| MS.gene057999 | MS.gene83326 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene83326 | 0.816374 | 5.72E-52 | -1.69E-46 |
| MS.gene058074 | MS.gene83326 | 0.835311 | 1.81E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene83326 | 0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene059227 | MS.gene83326 | 0.808239 | 3.42E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene83326 | 0.802555 | 5.31E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene83326 | -0.800789 | 1.22E-48 | -1.69E-46 |
| MS.gene06011 | MS.gene83326 | 0.83375 | 4.46E-56 | -1.69E-46 |
| MS.gene060365 | MS.gene83326 | 0.806902 | 6.56E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene83326 | 0.808699 | 2.72E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene83326 | 0.829274 | 5.64E-55 | -1.69E-46 |
| MS.gene060917 | MS.gene83326 | 0.804438 | 2.16E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene83326 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene83326 | 0.803175 | 3.95E-49 | -1.69E-46 |
| MS.gene06118 | MS.gene83326 | 0.817823 | 2.70E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20684 | MS.gene83326 | PPI |
| MS.gene042467 | MS.gene83326 | PPI |
| MS.gene08162 | MS.gene83326 | PPI |
| MS.gene41778 | MS.gene83326 | PPI |
| MS.gene038868 | MS.gene83326 | PPI |
| MS.gene03010 | MS.gene83326 | PPI |
| MS.gene64395 | MS.gene83326 | PPI |
| MS.gene35518 | MS.gene83326 | PPI |
| MS.gene005651 | MS.gene83326 | PPI |
| MS.gene07162 | MS.gene83326 | PPI |
| MS.gene059290 | MS.gene83326 | PPI |
| MS.gene034372 | MS.gene83326 | PPI |
| MS.gene067859 | MS.gene83326 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83326.t1 | MTR_2g054920 | 99.713 | 348 | 1 | 0 | 1 | 348 | 1 | 348 | 0.0 | 718 |
| MS.gene83326.t1 | MTR_7g081695 | 83.621 | 232 | 22 | 2 | 100 | 316 | 514 | 744 | 1.99e-132 | 396 |
| MS.gene83326.t1 | MTR_2g087640 | 30.841 | 321 | 190 | 8 | 9 | 301 | 3 | 319 | 3.63e-38 | 139 |
| MS.gene83326.t1 | MTR_1g072140 | 25.685 | 292 | 203 | 9 | 15 | 297 | 26 | 312 | 3.22e-18 | 84.3 |
| MS.gene83326.t1 | MTR_8g092620 | 26.087 | 276 | 193 | 8 | 30 | 299 | 29 | 299 | 1.61e-16 | 79.3 |
| MS.gene83326.t1 | MTR_4g119620 | 23.567 | 314 | 213 | 10 | 4 | 297 | 15 | 321 | 7.63e-15 | 74.7 |
| MS.gene83326.t1 | MTR_7g086360 | 26.000 | 300 | 160 | 9 | 10 | 296 | 92 | 342 | 8.47e-14 | 72.0 |
| MS.gene83326.t1 | MTR_8g092620 | 25.735 | 272 | 191 | 8 | 30 | 295 | 36 | 302 | 9.20e-14 | 71.6 |
| MS.gene83326.t1 | MTR_6g004040 | 28.042 | 189 | 130 | 6 | 112 | 297 | 27 | 212 | 1.93e-13 | 72.0 |
| MS.gene83326.t1 | MTR_3g449990 | 23.711 | 291 | 201 | 9 | 21 | 297 | 272 | 555 | 3.02e-13 | 71.2 |
| MS.gene83326.t1 | MTR_3g116500 | 25.843 | 267 | 174 | 8 | 56 | 299 | 60 | 325 | 1.30e-12 | 68.6 |
| MS.gene83326.t1 | MTR_5g022690 | 28.571 | 203 | 138 | 5 | 14 | 213 | 277 | 475 | 1.88e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83326.t1 | AT3G15610 | 79.710 | 345 | 62 | 1 | 1 | 345 | 1 | 337 | 0.0 | 567 |
| MS.gene83326.t1 | AT1G52730 | 80.000 | 345 | 63 | 1 | 1 | 345 | 1 | 339 | 0.0 | 564 |
| MS.gene83326.t1 | AT1G52730 | 80.000 | 345 | 63 | 1 | 1 | 345 | 1 | 339 | 0.0 | 564 |
| MS.gene83326.t1 | AT1G15470 | 76.807 | 332 | 71 | 1 | 9 | 340 | 4 | 329 | 0.0 | 543 |
| MS.gene83326.t1 | AT1G52730 | 86.364 | 264 | 36 | 0 | 1 | 264 | 1 | 264 | 1.96e-168 | 470 |
| MS.gene83326.t1 | AT1G15470 | 83.137 | 255 | 43 | 0 | 9 | 263 | 4 | 258 | 1.12e-162 | 456 |
| MS.gene83326.t1 | AT2G46290 | 29.448 | 326 | 180 | 8 | 9 | 296 | 30 | 343 | 2.30e-39 | 143 |
| MS.gene83326.t1 | AT2G46280 | 30.189 | 318 | 188 | 8 | 9 | 296 | 3 | 316 | 2.70e-34 | 129 |
| MS.gene83326.t1 | AT2G46280 | 30.189 | 318 | 188 | 8 | 9 | 296 | 3 | 316 | 2.70e-34 | 129 |
| MS.gene83326.t1 | AT2G46280 | 30.488 | 246 | 150 | 7 | 9 | 237 | 3 | 244 | 6.91e-22 | 93.6 |
| MS.gene83326.t1 | AT3G49660 | 26.441 | 295 | 200 | 8 | 15 | 297 | 23 | 312 | 5.01e-21 | 92.4 |
| MS.gene83326.t1 | AT4G02730 | 30.078 | 256 | 161 | 12 | 54 | 297 | 36 | 285 | 6.07e-17 | 81.3 |
| MS.gene83326.t1 | AT4G02730 | 26.165 | 279 | 194 | 10 | 30 | 298 | 54 | 330 | 2.06e-15 | 76.6 |
| MS.gene83326.t1 | AT5G08560 | 24.765 | 319 | 218 | 11 | 21 | 322 | 276 | 589 | 1.89e-14 | 74.7 |
| MS.gene83326.t1 | AT5G08560 | 24.765 | 319 | 218 | 11 | 21 | 322 | 276 | 589 | 1.89e-14 | 74.7 |
| MS.gene83326.t1 | AT5G08560 | 24.765 | 319 | 218 | 11 | 21 | 322 | 276 | 589 | 1.89e-14 | 74.7 |
| MS.gene83326.t1 | AT5G64730 | 22.993 | 274 | 202 | 7 | 30 | 298 | 29 | 298 | 1.37e-13 | 70.9 |
| MS.gene83326.t1 | AT2G43770 | 24.503 | 302 | 205 | 12 | 10 | 296 | 47 | 340 | 2.65e-13 | 70.5 |
| MS.gene83326.t1 | AT2G01330 | 23.167 | 341 | 197 | 12 | 15 | 297 | 187 | 520 | 1.72e-12 | 68.9 |
| MS.gene83326.t1 | AT1G71840 | 26.718 | 262 | 174 | 11 | 49 | 297 | 58 | 314 | 4.35e-12 | 67.4 |
| MS.gene83326.t1 | AT3G18130 | 24.068 | 295 | 185 | 9 | 14 | 300 | 61 | 324 | 7.04e-12 | 66.2 |
| MS.gene83326.t1 | AT1G48630 | 24.407 | 295 | 184 | 9 | 14 | 300 | 61 | 324 | 2.73e-11 | 64.3 |
| MS.gene83326.t1 | AT5G23430 | 26.984 | 189 | 132 | 6 | 112 | 297 | 27 | 212 | 8.13e-11 | 63.9 |
| MS.gene83326.t1 | AT5G23430 | 26.984 | 189 | 132 | 6 | 112 | 297 | 27 | 212 | 8.57e-11 | 63.9 |
| MS.gene83326.t1 | AT5G23430 | 26.984 | 189 | 132 | 6 | 112 | 297 | 27 | 212 | 8.57e-11 | 63.9 |
Find 96 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCCTTTCCTTTGGACT+TGG | 0.240542 | 2.2:-30046472 | None:intergenic |
| ATGGTTCTACTGTCAAGTTT+TGG | 0.261085 | 2.2:+30045481 | MS.gene83326:CDS |
| CCCCGCCTCTTCCTTTCCTT+TGG | 0.282864 | 2.2:-30046478 | None:intergenic |
| ATTGAGTTCATGTACTGATA+TGG | 0.286538 | 2.2:+30045199 | MS.gene83326:CDS |
| GGGGATTTATCCACTTCTTT+AGG | 0.292998 | 2.2:-30045131 | None:intergenic |
| GGTTTGTGTGCAGCAAAGTT+TGG | 0.345909 | 2.2:+30044356 | MS.gene83326:intron |
| AACAAACTTGTTACCAAACT+TGG | 0.348142 | 2.2:-30045658 | None:intergenic |
| CACTGTGTCCGGTTCTCTCC+TGG | 0.356259 | 2.2:+30046273 | MS.gene83326:CDS |
| AAAGTTTGGGATGCATTAAC+AGG | 0.357474 | 2.2:+30044370 | MS.gene83326:CDS |
| TGCTGTTTGGAGTTGTTGTT+TGG | 0.358064 | 2.2:+30041048 | MS.gene83326:CDS |
| AAGAAACCATCAGGAGTAAC+AGG | 0.368685 | 2.2:-30040714 | None:intergenic |
| TTTGGTAACAAGTTTGTTGC+TGG | 0.381118 | 2.2:+30045663 | MS.gene83326:CDS |
| GCCGATTCAAATCATAAATT+CGG | 0.388321 | 2.2:-30045097 | None:intergenic |
| GTTTGTGTGCAGCAAAGTTT+GGG | 0.396138 | 2.2:+30044357 | MS.gene83326:intron |
| GCTTCGTTAGAGCCCAAGTT+TGG | 0.408433 | 2.2:+30045645 | MS.gene83326:CDS |
| AAGGGCATAAAGGTGCTGTT+TGG | 0.408519 | 2.2:+30041035 | MS.gene83326:CDS |
| GGAACATTTGAAGGGCATAA+AGG | 0.410447 | 2.2:+30041025 | MS.gene83326:CDS |
| AGGATGGAACCATCAGAATA+TGG | 0.410704 | 2.2:+30046322 | MS.gene83326:CDS |
| TACAGTCCTGTTACTCCTGA+TGG | 0.412838 | 2.2:+30040708 | MS.gene83326:CDS |
| TCCGAATTTATGATTTGAAT+CGG | 0.420073 | 2.2:+30045096 | MS.gene83326:CDS |
| GATTGGATTGGAACATTTGA+AGG | 0.427455 | 2.2:+30041016 | MS.gene83326:CDS |
| TTCCATACGGGCGATGAGAT+TGG | 0.430232 | 2.2:+30045717 | MS.gene83326:CDS |
| GCGACTTGGTGTCAAGTGTC+TGG | 0.437902 | 2.2:-30045407 | None:intergenic |
| GAGGTTTCGCGCAGGATTGA+GGG | 0.446305 | 2.2:+30046429 | MS.gene83326:CDS |
| GACTAGTGCTGAAGTGAGTC+AGG | 0.452988 | 2.2:+30045434 | MS.gene83326:CDS |
| TATTCTGATGGTTCCATCCT+CGG | 0.456186 | 2.2:-30046319 | None:intergenic |
| GCAACACTCCTGACTGAACC+AGG | 0.469039 | 2.2:-30045152 | None:intergenic |
| ACTTCTTTAGGAGGTGCATC+AGG | 0.470919 | 2.2:-30045119 | None:intergenic |
| GAAGGCAAATGCAGAGGAGG+AGG | 0.475882 | 2.2:+30046410 | MS.gene83326:CDS |
| GGAATGGAGAGACTGGAGAT+TGG | 0.482165 | 2.2:+30040999 | MS.gene83326:CDS |
| GGAGGAGAATCGTATGCATC+AGG | 0.485943 | 2.2:+30046294 | MS.gene83326:CDS |
| GGAGGTTTCGCGCAGGATTG+AGG | 0.486264 | 2.2:+30046428 | MS.gene83326:CDS |
| CTAATAAGAAAGAAACCATC+AGG | 0.486855 | 2.2:-30040723 | None:intergenic |
| TTGAGTTCATGTACTGATAT+GGG | 0.489256 | 2.2:+30045200 | MS.gene83326:CDS |
| TTGGTAACAAGTTTGTTGCT+GGG | 0.489658 | 2.2:+30045664 | MS.gene83326:CDS |
| GATGCATACGATTCTCCTCC+AGG | 0.490054 | 2.2:-30046291 | None:intergenic |
| ATTCTCCTCCAGGAGAGAAC+CGG | 0.492972 | 2.2:-30046281 | None:intergenic |
| ACCAAATGGAACCCTGGAAA+AGG | 0.496038 | 2.2:+30046386 | MS.gene83326:CDS |
| CTCACTTCAGCACTAGTCAT+AGG | 0.502533 | 2.2:-30045429 | None:intergenic |
| TCAGAGGGTTTATCACCAAA+TGG | 0.504610 | 2.2:+30046372 | MS.gene83326:CDS |
| TACATGAACTCAATATAGTC+TGG | 0.504684 | 2.2:-30045190 | None:intergenic |
| CCCTGTCTGCCATATTCTGA+TGG | 0.507125 | 2.2:-30046331 | None:intergenic |
| ATGCTGAGGAATGGAGAGAC+TGG | 0.507216 | 2.2:+30040992 | MS.gene83326:CDS |
| ACCATCAGAATATGGCAGAC+AGG | 0.510525 | 2.2:+30046330 | MS.gene83326:CDS |
| ATGGTCCTGTACACTGTGTC+CGG | 0.512630 | 2.2:+30046262 | MS.gene83326:CDS |
| AGGCTATGGGATGTAAGAAC+TGG | 0.513301 | 2.2:+30045375 | MS.gene83326:intron |
| TCTGATTCATCATGAGTCAA+TGG | 0.518807 | 2.2:-30046354 | None:intergenic |
| GTTCAGTCAGGAGTGTTGCA+TGG | 0.523714 | 2.2:+30045156 | MS.gene83326:CDS |
| GTTGATAATTCACAGGCTAT+GGG | 0.524204 | 2.2:+30045362 | MS.gene83326:intron |
| GATTTATCCACTTCTTTAGG+AGG | 0.527221 | 2.2:-30045128 | None:intergenic |
| GGAGAGACTGGAGATTGGAT+TGG | 0.528885 | 2.2:+30041004 | MS.gene83326:CDS |
| CAAGTCCAAAGGAAAGGAAG+AGG | 0.530035 | 2.2:+30046473 | MS.gene83326:CDS |
| CGCTATATTACAACTGCTGA+TGG | 0.538929 | 2.2:+30045462 | MS.gene83326:CDS |
| TACCAATCTCATCGCCCGTA+TGG | 0.543083 | 2.2:-30045719 | None:intergenic |
| TCCAAAGGAAAGGAAGAGGC+GGG | 0.544199 | 2.2:+30046477 | MS.gene83326:CDS |
| CTGTAAAAGAGATCAACAAC+TGG | 0.548288 | 2.2:-30040690 | None:intergenic |
| AAAGAAGTGGATAAATCCCC+TGG | 0.551218 | 2.2:+30045134 | MS.gene83326:CDS |
| GCATGCAACAAAGGACATCA+TGG | 0.555607 | 2.2:+30046243 | MS.gene83326:intron |
| CAAAGGAAAGGAAGAGGCGG+GGG | 0.556170 | 2.2:+30046479 | MS.gene83326:CDS |
| CCATCAGAATATGGCAGACA+GGG | 0.557804 | 2.2:+30046331 | MS.gene83326:CDS |
| ATAAATCCCCTGGTTCAGTC+AGG | 0.558779 | 2.2:+30045144 | MS.gene83326:CDS |
| GAGAACCGGACACAGTGTAC+AGG | 0.559046 | 2.2:-30046267 | None:intergenic |
| GGAGGCCAAGTCCAAAGGAA+AGG | 0.561592 | 2.2:+30046467 | MS.gene83326:CDS |
| ACAAACTTGTTACCAAACTT+GGG | 0.561688 | 2.2:-30045657 | None:intergenic |
| GTACTGATATGGGAGGCGTC+AGG | 0.570966 | 2.2:+30045210 | MS.gene83326:CDS |
| AGCACTAGTCATAGGCGACT+TGG | 0.571425 | 2.2:-30045421 | None:intergenic |
| ACTGTACCTCTTGTTTGTCA+CGG | 0.577286 | 2.2:+30040657 | MS.gene83326:CDS |
| TGGTAACAAGTTTGTTGCTG+GGG | 0.580435 | 2.2:+30045665 | MS.gene83326:CDS |
| TGATGCACCTCCTAAAGAAG+TGG | 0.589350 | 2.2:+30045121 | MS.gene83326:CDS |
| GGAGAAGGCAAATGCAGAGG+AGG | 0.590265 | 2.2:+30046407 | MS.gene83326:CDS |
| GTCCAAAGGAAAGGAAGAGG+CGG | 0.595374 | 2.2:+30046476 | MS.gene83326:CDS |
| ATTGGATTGGAACATTTGAA+GGG | 0.596088 | 2.2:+30041017 | MS.gene83326:CDS |
| GCTAGTCCTATGCTGAGGAA+TGG | 0.597073 | 2.2:+30040983 | MS.gene83326:CDS |
| GGTAACAAGTTTGTTGCTGG+GGG | 0.598590 | 2.2:+30045666 | MS.gene83326:CDS |
| GAAGCTGATTCCACATTGCA+AGG | 0.600142 | 2.2:-30045627 | None:intergenic |
| GCAGAGGAGGCCAAGTCCAA+AGG | 0.602036 | 2.2:+30046462 | MS.gene83326:CDS |
| TGGAACCCTGGAAAAGGAGA+AGG | 0.603332 | 2.2:+30046392 | MS.gene83326:CDS |
| GTGATGGCAGCATGCAACAA+AGG | 0.603771 | 2.2:+30046234 | MS.gene83326:intron |
| TTTCTTATTAGCGCAAGCAA+AGG | 0.606556 | 2.2:+30040735 | MS.gene83326:CDS |
| TATGCATCAGGATCCGAGGA+TGG | 0.610567 | 2.2:+30046306 | MS.gene83326:CDS |
| CAACACTCCTGACTGAACCA+GGG | 0.615920 | 2.2:-30045151 | None:intergenic |
| TTTATCACCAAATGGAACCC+TGG | 0.617473 | 2.2:+30046380 | MS.gene83326:CDS |
| ATTGACTCATGATGAATCAG+AGG | 0.620794 | 2.2:+30046356 | MS.gene83326:CDS |
| GTCTCTCCATTCCTCAGCAT+AGG | 0.627751 | 2.2:-30040989 | None:intergenic |
| TTGACTCATGATGAATCAGA+GGG | 0.630585 | 2.2:+30046357 | MS.gene83326:CDS |
| CCAAAGGAAAGGAAGAGGCG+GGG | 0.631518 | 2.2:+30046478 | MS.gene83326:CDS |
| ATCGTATGCATCAGGATCCG+AGG | 0.634906 | 2.2:+30046302 | MS.gene83326:CDS |
| AGTGCTGAAGTGAGTCAGGA+TGG | 0.642357 | 2.2:+30045438 | MS.gene83326:CDS |
| CAGAGGAGGAGGTTTCGCGC+AGG | 0.644543 | 2.2:+30046421 | MS.gene83326:CDS |
| GAGTGACCGTGACAAACAAG+AGG | 0.644753 | 2.2:-30040663 | None:intergenic |
| AACACTCCTGACTGAACCAG+GGG | 0.647227 | 2.2:-30045150 | None:intergenic |
| AAAGGAGAAGGCAAATGCAG+AGG | 0.668862 | 2.2:+30046404 | MS.gene83326:CDS |
| CTATGACATGCCTTGCAATG+TGG | 0.670893 | 2.2:+30045617 | MS.gene83326:CDS |
| TGTGTCCGGTTCTCTCCTGG+AGG | 0.681279 | 2.2:+30046276 | MS.gene83326:CDS |
| TAGATGCTAGTCCTATGCTG+AGG | 0.696428 | 2.2:+30040978 | MS.gene83326:intron |
| AGTTCATGTACTGATATGGG+AGG | 0.705266 | 2.2:+30045203 | MS.gene83326:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAACAAATATTATAAA+CGG | - | chr2.2:30045922-30045941 | None:intergenic | 10.0% |
| !! | ATATATATTCTGTTAAAATT+TGG | + | chr2.2:30044946-30044965 | MS.gene83326:intron | 10.0% |
| !! | GTATATATTGATAAATATTA+CGG | + | chr2.2:30046200-30046219 | MS.gene83326:intron | 10.0% |
| !! | TGTATATATTAAAAAATAGT+TGG | - | chr2.2:30046083-30046102 | None:intergenic | 10.0% |
| !!! | TATAAACTCAATTTTTAAAT+TGG | + | chr2.2:30041523-30041542 | MS.gene83326:intron | 10.0% |
| !! | AAACATTTCTTATAATAACT+GGG | + | chr2.2:30043637-30043656 | MS.gene83326:intron | 15.0% |
| !! | AAAGAATAAAATGTTAAATG+GGG | - | chr2.2:30042460-30042479 | None:intergenic | 15.0% |
| !! | ACAAAGAATAAAATGTTAAA+TGG | - | chr2.2:30042462-30042481 | None:intergenic | 15.0% |
| !! | CAAAGAATAAAATGTTAAAT+GGG | - | chr2.2:30042461-30042480 | None:intergenic | 15.0% |
| !!! | ATTTAATTTTGGAATTTTAG+TGG | + | chr2.2:30040922-30040941 | MS.gene83326:intron | 15.0% |
| !!! | TGGTATTTATTTTCTATTTA+CGG | - | chr2.2:30044565-30044584 | None:intergenic | 15.0% |
| !! | AATTCCATATAGGTAATAAT+AGG | + | chr2.2:30046011-30046030 | MS.gene83326:intron | 20.0% |
| !! | ACAAAGTGATTTAGATTAAA+TGG | - | chr2.2:30042579-30042598 | None:intergenic | 20.0% |
| !! | ATTGATGTTTGTATATATCT+GGG | + | chr2.2:30045028-30045047 | MS.gene83326:intron | 20.0% |
| !! | GAAACATTTCTTATAATAAC+TGG | + | chr2.2:30043636-30043655 | MS.gene83326:intron | 20.0% |
| !! | TAAAATCCTCATATAGTATT+AGG | - | chr2.2:30041559-30041578 | None:intergenic | 20.0% |
| !! | TTCAGTTCTACAAAATTAAT+TGG | + | chr2.2:30042257-30042276 | MS.gene83326:intron | 20.0% |
| !!! | AATTTTGTGTTTTTGTCATT+AGG | - | chr2.2:30044535-30044554 | None:intergenic | 20.0% |
| !!! | ACTAAACTGATTTTTAAGTT+TGG | + | chr2.2:30046161-30046180 | MS.gene83326:intron | 20.0% |
| !!! | AGTCAATTCAATTTTTTCAA+TGG | + | chr2.2:30044026-30044045 | MS.gene83326:intron | 20.0% |
| !!! | ATATTTGTTGGTATTCATTT+TGG | + | chr2.2:30044493-30044512 | MS.gene83326:intron | 20.0% |
| !!! | ATTTTTAAATTGGTAAGAGT+TGG | + | chr2.2:30041533-30041552 | MS.gene83326:intron | 20.0% |
| !!! | CTAAAAAACAGTAGATTTTA+AGG | - | chr2.2:30042371-30042390 | None:intergenic | 20.0% |
| !!! | CTTCTTTTACGTATTTAAAT+TGG | - | chr2.2:30041459-30041478 | None:intergenic | 20.0% |
| !!! | GGTATTTATTTTCTATTTAC+GGG | - | chr2.2:30044564-30044583 | None:intergenic | 20.0% |
| !!! | TAATAGATCTGATCAATTTT+AGG | + | chr2.2:30040823-30040842 | MS.gene83326:intron | 20.0% |
| !!! | TAATTTTGTAGAACTGAAAA+GGG | - | chr2.2:30042255-30042274 | None:intergenic | 20.0% |
| !!! | TACTAGTATTATCTTTGTTT+TGG | + | chr2.2:30042180-30042199 | MS.gene83326:intron | 20.0% |
| !!! | TATCTCAAAATGTTTCATTT+TGG | - | chr2.2:30041824-30041843 | None:intergenic | 20.0% |
| !!! | TATTTAAATTGGACCTTTTT+GGG | - | chr2.2:30041448-30041467 | None:intergenic | 20.0% |
| !!! | TTAATTTTGTAGAACTGAAA+AGG | - | chr2.2:30042256-30042275 | None:intergenic | 20.0% |
| !!! | TTACTAATTTTGTTTCCTTT+TGG | + | chr2.2:30042502-30042521 | MS.gene83326:intron | 20.0% |
| ! | AAACCTATAATGTAATGTGA+TGG | - | chr2.2:30041772-30041791 | None:intergenic | 25.0% |
| ! | AAATCATATTTCCTATGTTC+TGG | + | chr2.2:30046056-30046075 | MS.gene83326:intron | 25.0% |
| ! | AAATGGGGATTCATATTAAA+TGG | - | chr2.2:30042445-30042464 | None:intergenic | 25.0% |
| ! | AATTAAATGTTATCACGTGT+CGG | - | chr2.2:30040910-30040929 | None:intergenic | 25.0% |
| ! | AATTAGCATGACATATTTGT+TGG | + | chr2.2:30044335-30044354 | MS.gene83326:intron | 25.0% |
| ! | AATTGGAACTTTGATACTTA+TGG | - | chr2.2:30041912-30041931 | None:intergenic | 25.0% |
| ! | ACAATAATGACTAAGCAATA+TGG | - | chr2.2:30044110-30044129 | None:intergenic | 25.0% |
| ! | ACAGAGAATAAAATGTTAAC+TGG | - | chr2.2:30042399-30042418 | None:intergenic | 25.0% |
| ! | AGAACATAGGAAATATGATT+TGG | - | chr2.2:30046057-30046076 | None:intergenic | 25.0% |
| ! | AGATCCTATTATTACCTATA+TGG | - | chr2.2:30046018-30046037 | None:intergenic | 25.0% |
| ! | ATAAAATGATGATCTTGGTT+AGG | + | chr2.2:30043438-30043457 | MS.gene83326:intron | 25.0% |
| ! | ATATACAAAAACGACAACAA+CGG | - | chr2.2:30045271-30045290 | None:intergenic | 25.0% |
| ! | ATGAAAATACTATAATCGCT+TGG | - | chr2.2:30044613-30044632 | None:intergenic | 25.0% |
| ! | CAATCAATTCATATGAACAA+AGG | - | chr2.2:30045012-30045031 | None:intergenic | 25.0% |
| ! | CACACACATCTAATATAAAT+AGG | + | chr2.2:30041414-30041433 | MS.gene83326:intron | 25.0% |
| ! | CATAACCTTAAAAAAGAACA+TGG | - | chr2.2:30045541-30045560 | None:intergenic | 25.0% |
| ! | CTTGCAGATACAATTTAATA+GGG | - | chr2.2:30044858-30044877 | None:intergenic | 25.0% |
| ! | GATTGATGTTTGTATATATC+TGG | + | chr2.2:30045027-30045046 | MS.gene83326:intron | 25.0% |
| ! | GCATAGTAATACTAGAATAA+GGG | - | chr2.2:30042153-30042172 | None:intergenic | 25.0% |
| ! | GTAAGTAACAATAAGTTAGT+TGG | + | chr2.2:30045515-30045534 | MS.gene83326:intron | 25.0% |
| ! | TAAAAGAAGTTCATAACCAA+TGG | + | chr2.2:30041470-30041489 | MS.gene83326:intron | 25.0% |
| ! | TAAAATGATGATCTTGGTTA+GGG | + | chr2.2:30043439-30043458 | MS.gene83326:intron | 25.0% |
| ! | TAAGAGCAGAAAATGTTAAA+TGG | - | chr2.2:30042550-30042569 | None:intergenic | 25.0% |
| ! | TACATTATTGACAGAAGAAA+GGG | + | chr2.2:30043331-30043350 | MS.gene83326:intron | 25.0% |
| ! | TCATGAGTGAATGTAAAAAA+GGG | + | chr2.2:30043775-30043794 | MS.gene83326:intron | 25.0% |
| ! | TCCGAATTTATGATTTGAAT+CGG | + | chr2.2:30045096-30045115 | MS.gene83326:CDS | 25.0% |
| ! | TGAGATTTACAATTCTGATT+GGG | - | chr2.2:30042965-30042984 | None:intergenic | 25.0% |
| ! | TGCATAGTAATACTAGAATA+AGG | - | chr2.2:30042154-30042173 | None:intergenic | 25.0% |
| ! | TTAATTGAATGCTGTACTAA+TGG | - | chr2.2:30043398-30043417 | None:intergenic | 25.0% |
| ! | TTACATTATTGACAGAAGAA+AGG | + | chr2.2:30043330-30043349 | MS.gene83326:intron | 25.0% |
| ! | TTAGTACAGCATTCAATTAA+TGG | + | chr2.2:30043398-30043417 | MS.gene83326:intron | 25.0% |
| ! | TTCATGAGTGAATGTAAAAA+AGG | + | chr2.2:30043774-30043793 | MS.gene83326:intron | 25.0% |
| ! | TTTATTGTCTTATGCTTTAC+CGG | + | chr2.2:30041349-30041368 | MS.gene83326:intron | 25.0% |
| ! | TTTGATATAAACATGAAGCT+TGG | + | chr2.2:30045317-30045336 | MS.gene83326:intron | 25.0% |
| ! | TTTGTTAATTCAATGTGCAT+AGG | + | chr2.2:30041273-30041292 | MS.gene83326:intron | 25.0% |
| !! | AAGACAATAAACATTTTCAC+AGG | - | chr2.2:30041340-30041359 | None:intergenic | 25.0% |
| !! | AAGGTATTATTCTTGGATTT+GGG | + | chr2.2:30040754-30040773 | MS.gene83326:intron | 25.0% |
| !! | AATTGTTAACTCGAAGATTT+TGG | - | chr2.2:30041941-30041960 | None:intergenic | 25.0% |
| !! | AATTTTGTAGAACTGAAAAG+GGG | - | chr2.2:30042254-30042273 | None:intergenic | 25.0% |
| !! | ATTGTTAACTCGAAGATTTT+GGG | - | chr2.2:30041940-30041959 | None:intergenic | 25.0% |
| !! | GAAAGCATAATAATCCTAAT+GGG | - | chr2.2:30044058-30044077 | None:intergenic | 25.0% |
| !! | GTATTTAAATTGGACCTTTT+TGG | - | chr2.2:30041449-30041468 | None:intergenic | 25.0% |
| !! | TAGGATCTAAAACCAAAATA+AGG | + | chr2.2:30046030-30046049 | MS.gene83326:intron | 25.0% |
| !! | TGAAAGCATAATAATCCTAA+TGG | - | chr2.2:30044059-30044078 | None:intergenic | 25.0% |
| !!! | AAAGGTATTATTCTTGGATT+TGG | + | chr2.2:30040753-30040772 | MS.gene83326:intron | 25.0% |
| !!! | AAGTAGTGAGGTTTTAAAAA+AGG | + | chr2.2:30043493-30043512 | MS.gene83326:intron | 25.0% |
| !!! | AGTATTATCTTTGTTTTGGT+AGG | + | chr2.2:30042184-30042203 | MS.gene83326:intron | 25.0% |
| !!! | ATATGATTTGGTCCTTATTT+TGG | - | chr2.2:30046045-30046064 | None:intergenic | 25.0% |
| !!! | CACGTGATAACATTTAATTT+TGG | + | chr2.2:30040911-30040930 | MS.gene83326:intron | 25.0% |
| !!! | GAAGATTTTGGGATTTAAAT+TGG | - | chr2.2:30041929-30041948 | None:intergenic | 25.0% |
| !!! | TCATGTTTTTGATTTCCATA+CGG | + | chr2.2:30045704-30045723 | MS.gene83326:CDS | 25.0% |
| !!! | TTTATTTTCTATTTACGGGA+AGG | - | chr2.2:30044560-30044579 | None:intergenic | 25.0% |
| AAAAAATTTACGAGTCCTTG+TGG | + | chr2.2:30041494-30041513 | MS.gene83326:intron | 30.0% | |
| AAAAATTTACGAGTCCTTGT+GGG | + | chr2.2:30041495-30041514 | MS.gene83326:intron | 30.0% | |
| AAAATTGCATCAAATACACC+CGG | - | chr2.2:30043582-30043601 | None:intergenic | 30.0% | |
| AAAGAACACTATAATGCTTC+TGG | + | chr2.2:30043065-30043084 | MS.gene83326:intron | 30.0% | |
| AAATATTACGGTGTTCTATC+TGG | + | chr2.2:30046212-30046231 | MS.gene83326:intron | 30.0% | |
| AAATCATAAGTTCACAAGGT+TGG | + | chr2.2:30042815-30042834 | MS.gene83326:intron | 30.0% | |
| AAATCTTGATTCTTTGAGCA+AGG | + | chr2.2:30044766-30044785 | MS.gene83326:intron | 30.0% | |
| AACCTTGTGAACTTATGATT+TGG | - | chr2.2:30042816-30042835 | None:intergenic | 30.0% | |
| AATACTGAGTTCATGATTGT+AGG | - | chr2.2:30043137-30043156 | None:intergenic | 30.0% | |
| AGGACTTCAATATTGAAAAG+TGG | - | chr2.2:30043976-30043995 | None:intergenic | 30.0% | |
| ATAATCGCTTGGTAAATTCT+AGG | - | chr2.2:30044602-30044621 | None:intergenic | 30.0% | |
| ATACTAGTTGAGAAGTCATT+TGG | - | chr2.2:30043689-30043708 | None:intergenic | 30.0% | |
| ATATCAGAGTGTGATACTAA+AGG | - | chr2.2:30044212-30044231 | None:intergenic | 30.0% | |
| ATCAGAATTGTAAATCTCAC+CGG | + | chr2.2:30042966-30042985 | MS.gene83326:intron | 30.0% | |
| ATCTGTCATAAGATCGAAAT+GGG | - | chr2.2:30042334-30042353 | None:intergenic | 30.0% | |
| ATTAATCCTTGCAATATCTG+TGG | + | chr2.2:30045946-30045965 | MS.gene83326:intron | 30.0% | |
| ATTACAAAACAAGCTTATCC+TGG | + | chr2.2:30044900-30044919 | MS.gene83326:intron | 30.0% | |
| CAATATTGAAGTCCTAAAAC+AGG | + | chr2.2:30043981-30044000 | MS.gene83326:intron | 30.0% | |
| CAATTCATATGAACAAAGGT+GGG | - | chr2.2:30045008-30045027 | None:intergenic | 30.0% | |
| CACTAAACATACTGAAAGAA+AGG | - | chr2.2:30041141-30041160 | None:intergenic | 30.0% | |
| CCAATAGCTGAATTCATTTA+TGG | + | chr2.2:30044656-30044675 | MS.gene83326:intron | 30.0% | |
| CCATAAATGAATTCAGCTAT+TGG | - | chr2.2:30044659-30044678 | None:intergenic | 30.0% | |
| CTAATAAGAAAGAAACCATC+AGG | - | chr2.2:30040726-30040745 | None:intergenic | 30.0% | |
| GATGTTGTCAATCATCAAAA+AGG | - | chr2.2:30045564-30045583 | None:intergenic | 30.0% | |
| GATTAAATGCTGAATCCAAA+AGG | - | chr2.2:30042520-30042539 | None:intergenic | 30.0% | |
| GATTACTTGATCAATCCAAA+TGG | - | chr2.2:30041619-30041638 | None:intergenic | 30.0% | |
| GATTTGGGAATTGTAGATTA+TGG | + | chr2.2:30040769-30040788 | MS.gene83326:intron | 30.0% | |
| GCTTGCAGATACAATTTAAT+AGG | - | chr2.2:30044859-30044878 | None:intergenic | 30.0% | |
| GTCAATTATGAATACGATCA+AGG | - | chr2.2:30042794-30042813 | None:intergenic | 30.0% | |
| GTGAGATTTACAATTCTGAT+TGG | - | chr2.2:30042966-30042985 | None:intergenic | 30.0% | |
| GTTCCATCACATTACATTAT+AGG | + | chr2.2:30041766-30041785 | MS.gene83326:intron | 30.0% | |
| GTTGCATAAAATGATGATCT+TGG | + | chr2.2:30043433-30043452 | MS.gene83326:intron | 30.0% | |
| TAATGACTAAGCAATATGGA+AGG | - | chr2.2:30044106-30044125 | None:intergenic | 30.0% | |
| TACATGAACTCAATATAGTC+TGG | - | chr2.2:30045193-30045212 | None:intergenic | 30.0% | |
| TATAAGAAATGTTTCCACCA+CGG | - | chr2.2:30043631-30043650 | None:intergenic | 30.0% | |
| TATAGCGACTAATTCCATAT+AGG | + | chr2.2:30046001-30046020 | MS.gene83326:intron | 30.0% | |
| TCAATTCATATGAACAAAGG+TGG | - | chr2.2:30045009-30045028 | None:intergenic | 30.0% | |
| TCAGTAAAGAACAAAGTGAA+GGG | - | chr2.2:30042644-30042663 | None:intergenic | 30.0% | |
| TGCAAATTGTGAAAGAAACA+CGG | - | chr2.2:30044467-30044486 | None:intergenic | 30.0% | |
| TGTGGTATGCAATTATGTTT+GGG | - | chr2.2:30043240-30043259 | None:intergenic | 30.0% | |
| TTACCGTCATAAATGATATG+CGG | + | chr2.2:30041576-30041595 | MS.gene83326:intron | 30.0% | |
| TTCAATGGTTTAAACCCATT+AGG | + | chr2.2:30044041-30044060 | MS.gene83326:intron | 30.0% | |
| TTCAGTAAAGAACAAAGTGA+AGG | - | chr2.2:30042645-30042664 | None:intergenic | 30.0% | |
| TTGGTAGATGAATTCAGTTA+TGG | - | chr2.2:30044640-30044659 | None:intergenic | 30.0% | |
| TTTAGTTATCAAAAGATGCC+AGG | - | chr2.2:30046147-30046166 | None:intergenic | 30.0% | |
| TTTGCATGACTGATATTTGT+TGG | + | chr2.2:30044481-30044500 | MS.gene83326:intron | 30.0% | |
| ! | ATTGAGTTCATGTACTGATA+TGG | + | chr2.2:30045199-30045218 | MS.gene83326:CDS | 30.0% |
| ! | ATTGGATTGGAACATTTGAA+GGG | + | chr2.2:30041017-30041036 | MS.gene83326:CDS | 30.0% |
| ! | CAGAAATCAATTCCTGTTTT+AGG | - | chr2.2:30043996-30044015 | None:intergenic | 30.0% |
| ! | GAAGCATTATAGTGTTCTTT+AGG | - | chr2.2:30043065-30043084 | None:intergenic | 30.0% |
| ! | GCCGATTCAAATCATAAATT+CGG | - | chr2.2:30045100-30045119 | None:intergenic | 30.0% |
| ! | GTTTGGTTTAATTCATTGTG+TGG | + | chr2.2:30046178-30046197 | MS.gene83326:intron | 30.0% |
| ! | TAAAGAACAAGGCATTAACA+AGG | - | chr2.2:30044975-30044994 | None:intergenic | 30.0% |
| ! | TCATGCATTTTACATGTTTC+AGG | - | chr2.2:30043724-30043743 | None:intergenic | 30.0% |
| ! | TGCAATTTTCTGCAATATCA+AGG | + | chr2.2:30043593-30043612 | MS.gene83326:intron | 30.0% |
| ! | TTGAGTTCATGTACTGATAT+GGG | + | chr2.2:30045200-30045219 | MS.gene83326:CDS | 30.0% |
| !! | AACAAACTTGTTACCAAACT+TGG | - | chr2.2:30045661-30045680 | None:intergenic | 30.0% |
| !! | ACAAACTTGTTACCAAACTT+GGG | - | chr2.2:30045660-30045679 | None:intergenic | 30.0% |
| !! | ACATACTTGTTGTCTAAACT+TGG | + | chr2.2:30041879-30041898 | MS.gene83326:intron | 30.0% |
| !! | CATACTTGTTGTCTAAACTT+GGG | + | chr2.2:30041880-30041899 | MS.gene83326:intron | 30.0% |
| !! | GAATCTTGTTGATAATTCAC+AGG | + | chr2.2:30045355-30045374 | MS.gene83326:intron | 30.0% |
| !! | TCGCTATATGTTTTGTTCTA+GGG | - | chr2.2:30045989-30046008 | None:intergenic | 30.0% |
| !!! | AATGCTTCTGATTGTTGTTT+TGG | + | chr2.2:30045889-30045908 | MS.gene83326:intron | 30.0% |
| !!! | ACTCGTAAATTTTTTGCCAT+TGG | - | chr2.2:30041489-30041508 | None:intergenic | 30.0% |
| !!! | AGTGTCACTTACACTATTTT+TGG | - | chr2.2:30042027-30042046 | None:intergenic | 30.0% |
| !!! | CATGTTTTTGATTTCCATAC+GGG | + | chr2.2:30045705-30045724 | MS.gene83326:CDS | 30.0% |
| !!! | GCATTTTTTTCGATTTCTCA+AGG | - | chr2.2:30045874-30045893 | None:intergenic | 30.0% |
| !!! | GTGTCACTTACACTATTTTT+GGG | - | chr2.2:30042026-30042045 | None:intergenic | 30.0% |
| !!! | TATTTTTGGAGCAAAAAGAG+CGG | - | chr2.2:30042088-30042107 | None:intergenic | 30.0% |
| !!! | TGGTATTCATTTTGGTTGAT+CGG | + | chr2.2:30044501-30044520 | MS.gene83326:intron | 30.0% |
| AAACAAAACTGCAGAAACTC+AGG | + | chr2.2:30042844-30042863 | MS.gene83326:intron | 35.0% | |
| AAATAGTTGGTCCAGAACAT+AGG | - | chr2.2:30046070-30046089 | None:intergenic | 35.0% | |
| AACAAGATTCAGTGCAATAG+AGG | - | chr2.2:30045345-30045364 | None:intergenic | 35.0% | |
| AACACTATAATGCTTCTGGA+AGG | + | chr2.2:30043069-30043088 | MS.gene83326:intron | 35.0% | |
| AATCCATAGCTGAAAATCAC+AGG | - | chr2.2:30045588-30045607 | None:intergenic | 35.0% | |
| AATCCCGATTTAGTGTAATG+GGG | + | chr2.2:30041988-30042007 | MS.gene83326:intron | 35.0% | |
| ACATCAAAAACCTAGACACT+GGG | - | chr2.2:30043539-30043558 | None:intergenic | 35.0% | |
| AGAATCCCGATTTAGTGTAA+TGG | + | chr2.2:30041986-30042005 | MS.gene83326:intron | 35.0% | |
| AGACTCTATGATAAGATGCA+TGG | - | chr2.2:30041642-30041661 | None:intergenic | 35.0% | |
| AGCCACTTGTAACATAACAT+GGG | + | chr2.2:30043027-30043046 | MS.gene83326:intron | 35.0% | |
| ATACTAAAGGACTAATGCAG+GGG | - | chr2.2:30044199-30044218 | None:intergenic | 35.0% | |
| ATAGGAAAGTTAGCCCAAAA+AGG | + | chr2.2:30041432-30041451 | MS.gene83326:intron | 35.0% | |
| ATGTTATGTTACAAGTGGCT+GGG | - | chr2.2:30043027-30043046 | None:intergenic | 35.0% | |
| ATTCTATGTGTGGTCTAGAT+TGG | - | chr2.2:30041971-30041990 | None:intergenic | 35.0% | |
| CAAAAGTCTACACAAACTCA+TGG | - | chr2.2:30042762-30042781 | None:intergenic | 35.0% | |
| CTGTAAAAGAGATCAACAAC+TGG | - | chr2.2:30040693-30040712 | None:intergenic | 35.0% | |
| GAATCCCGATTTAGTGTAAT+GGG | + | chr2.2:30041987-30042006 | MS.gene83326:intron | 35.0% | |
| GACCAAATCATAAGTTCACA+AGG | + | chr2.2:30042811-30042830 | MS.gene83326:intron | 35.0% | |
| GACTCTATGATAAGATGCAT+GGG | - | chr2.2:30041641-30041660 | None:intergenic | 35.0% | |
| GAGTTTATAAATGACCCACA+AGG | - | chr2.2:30041512-30041531 | None:intergenic | 35.0% | |
| GATACTAAAGGACTAATGCA+GGG | - | chr2.2:30044200-30044219 | None:intergenic | 35.0% | |
| GATCTGTCATAAGATCGAAA+TGG | - | chr2.2:30042335-30042354 | None:intergenic | 35.0% | |
| GATTTATCCACTTCTTTAGG+AGG | - | chr2.2:30045131-30045150 | None:intergenic | 35.0% | |
| GCAAATTGTGAAAGAAACAC+GGG | - | chr2.2:30044466-30044485 | None:intergenic | 35.0% | |
| GTACAGCATTCAATTAATGG+TGG | + | chr2.2:30043401-30043420 | MS.gene83326:intron | 35.0% | |
| GTATCCTCAGATAAAGAACA+AGG | - | chr2.2:30044986-30045005 | None:intergenic | 35.0% | |
| GTGTGGTATGCAATTATGTT+TGG | - | chr2.2:30043241-30043260 | None:intergenic | 35.0% | |
| TAATTTCTCTGTGTCTAGTG+TGG | - | chr2.2:30043258-30043277 | None:intergenic | 35.0% | |
| TACTTGATCAATCCAAATGG+TGG | - | chr2.2:30041616-30041635 | None:intergenic | 35.0% | |
| TCTGATTCATCATGAGTCAA+TGG | - | chr2.2:30046357-30046376 | None:intergenic | 35.0% | |
| TCTGTCATAAGATCGAAATG+GGG | - | chr2.2:30042333-30042352 | None:intergenic | 35.0% | |
| TGAATATGCACTGTAATTCG+TGG | - | chr2.2:30043749-30043768 | None:intergenic | 35.0% | |
| TGATACTAAAGGACTAATGC+AGG | - | chr2.2:30044201-30044220 | None:intergenic | 35.0% | |
| TGGATAAGATCATTCGATCT+TGG | + | chr2.2:30042277-30042296 | MS.gene83326:intron | 35.0% | |
| TTATCATAGAGTCTCCATAC+TGG | + | chr2.2:30041648-30041667 | MS.gene83326:intron | 35.0% | |
| TTGACTCATGATGAATCAGA+GGG | + | chr2.2:30046357-30046376 | MS.gene83326:CDS | 35.0% | |
| TTGGTAGGATCTTTCAATCT+TGG | + | chr2.2:30042199-30042218 | MS.gene83326:intron | 35.0% | |
| TTTCTTATTAGCGCAAGCAA+AGG | + | chr2.2:30040735-30040754 | MS.gene83326:CDS | 35.0% | |
| ! | AAAGTTTGGGATGCATTAAC+AGG | + | chr2.2:30044370-30044389 | MS.gene83326:CDS | 35.0% |
| ! | AATGCCTTGTTCTTTATCTG+AGG | + | chr2.2:30044979-30044998 | MS.gene83326:intron | 35.0% |
| ! | AGTTGGCCTAATACTATATG+AGG | + | chr2.2:30041550-30041569 | MS.gene83326:intron | 35.0% |
| ! | ATGTAATGTGATGGAACAGT+AGG | - | chr2.2:30041763-30041782 | None:intergenic | 35.0% |
| ! | ATTGACTCATGATGAATCAG+AGG | + | chr2.2:30046356-30046375 | MS.gene83326:CDS | 35.0% |
| ! | CACTATCTTTTTCCACCATT+TGG | + | chr2.2:30041601-30041620 | MS.gene83326:intron | 35.0% |
| ! | GATTGGATTGGAACATTTGA+AGG | + | chr2.2:30041016-30041035 | MS.gene83326:CDS | 35.0% |
| ! | TAACTGACTCATGCTTTGTA+GGG | - | chr2.2:30045843-30045862 | None:intergenic | 35.0% |
| ! | TGTGATTTTCAGCTATGGAT+TGG | + | chr2.2:30045587-30045606 | MS.gene83326:intron | 35.0% |
| ! | TTGTAATTTCTGGATGTGTC+CGG | - | chr2.2:30042988-30043007 | None:intergenic | 35.0% |
| ! | TTGTACTGTAGTTGTCACTT+TGG | + | chr2.2:30044718-30044737 | MS.gene83326:intron | 35.0% |
| ! | TTTTGGCGTGCATAATTATC+AGG | - | chr2.2:30041807-30041826 | None:intergenic | 35.0% |
| !! | ATGGTTCTACTGTCAAGTTT+TGG | + | chr2.2:30045481-30045500 | MS.gene83326:CDS | 35.0% |
| !! | GCAAGCAAAGGTATTATTCT+TGG | + | chr2.2:30040747-30040766 | MS.gene83326:intron | 35.0% |
| !! | GGTATTTTCGAGGAAAAAAG+TGG | - | chr2.2:30042132-30042151 | None:intergenic | 35.0% |
| !! | GTCGCTATATGTTTTGTTCT+AGG | - | chr2.2:30045990-30046009 | None:intergenic | 35.0% |
| !! | GTTGATAATTCACAGGCTAT+GGG | + | chr2.2:30045362-30045381 | MS.gene83326:intron | 35.0% |
| !! | TGGTTCTACTGTCAAGTTTT+GGG | + | chr2.2:30045482-30045501 | MS.gene83326:CDS | 35.0% |
| !! | TGTTGATAATTCACAGGCTA+TGG | + | chr2.2:30045361-30045380 | MS.gene83326:intron | 35.0% |
| !! | TTGGTAACAAGTTTGTTGCT+GGG | + | chr2.2:30045664-30045683 | MS.gene83326:CDS | 35.0% |
| !! | TTTGGTAACAAGTTTGTTGC+TGG | + | chr2.2:30045663-30045682 | MS.gene83326:CDS | 35.0% |
| !!! | ACACTAGCATTTTTTTGCAG+TGG | + | chr2.2:30044143-30044162 | MS.gene83326:intron | 35.0% |
| !!! | CTAGAATAAGGGTATTTTCG+AGG | - | chr2.2:30042142-30042161 | None:intergenic | 35.0% |
| !!! | GTTGGCCATGTTCTTTTTTA+AGG | + | chr2.2:30045533-30045552 | MS.gene83326:intron | 35.0% |
| !!! | TTTGTTTTACACTTCTGACC+TGG | + | chr2.2:30046126-30046145 | MS.gene83326:intron | 35.0% |
| AAAGAAGTGGATAAATCCCC+TGG | + | chr2.2:30045134-30045153 | MS.gene83326:CDS | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | - | chr2.2:30043881-30043900 | None:intergenic | 40.0% | |
| AACAGTCAAAGTCTCGAGAA+GGG | - | chr2.2:30042613-30042632 | None:intergenic | 40.0% | |
| AAGAAACCATCAGGAGTAAC+AGG | - | chr2.2:30040717-30040736 | None:intergenic | 40.0% | |
| AAGTGAAACTTTGCTGCGAT+TGG | - | chr2.2:30043372-30043391 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | - | chr2.2:30043880-30043899 | None:intergenic | 40.0% | |
| AGCATTCAATTAATGGTGGC+AGG | + | chr2.2:30043405-30043424 | MS.gene83326:intron | 40.0% | |
| AGGATGGAACCATCAGAATA+TGG | + | chr2.2:30046322-30046341 | MS.gene83326:CDS | 40.0% | |
| ATGATGATCTTGGTTAGGGA+TGG | + | chr2.2:30043443-30043462 | MS.gene83326:intron | 40.0% | |
| CAACCCCATTACACTAAATC+GGG | - | chr2.2:30041994-30042013 | None:intergenic | 40.0% | |
| CAGCCACTTGTAACATAACA+TGG | + | chr2.2:30043026-30043045 | MS.gene83326:intron | 40.0% | |
| CATCAAAAACCTAGACACTG+GGG | - | chr2.2:30043538-30043557 | None:intergenic | 40.0% | |
| CATGATCCACAGATATTGCA+AGG | - | chr2.2:30045955-30045974 | None:intergenic | 40.0% | |
| CATGTTATGTTACAAGTGGC+TGG | - | chr2.2:30043028-30043047 | None:intergenic | 40.0% | |
| CCAACCCCATTACACTAAAT+CGG | - | chr2.2:30041995-30042014 | None:intergenic | 40.0% | |
| CGCTATATTACAACTGCTGA+TGG | + | chr2.2:30045462-30045481 | MS.gene83326:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr2.2:30043849-30043868 | None:intergenic | 40.0% | |
| CTAAATCGGGATTCTATGTG+TGG | - | chr2.2:30041981-30042000 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr2.2:30043875-30043894 | None:intergenic | 40.0% | |
| CTGAGTTCATGATTGTAGGT+AGG | - | chr2.2:30043133-30043152 | None:intergenic | 40.0% | |
| GAATGTAAAAAAGGGCAACC+CGG | + | chr2.2:30043783-30043802 | MS.gene83326:intron | 40.0% | |
| GACATCAAAAACCTAGACAC+TGG | - | chr2.2:30043540-30043559 | None:intergenic | 40.0% | |
| GACCATACTATGTTGACAGT+TGG | + | chr2.2:30045245-30045264 | MS.gene83326:intron | 40.0% | |
| GACCCATGTTATGTTACAAG+TGG | - | chr2.2:30043032-30043051 | None:intergenic | 40.0% | |
| GCACCGCATATCATTTATGA+CGG | - | chr2.2:30041582-30041601 | None:intergenic | 40.0% | |
| GCATTCAATTAATGGTGGCA+GGG | + | chr2.2:30043406-30043425 | MS.gene83326:intron | 40.0% | |
| GGGGATTTATCCACTTCTTT+AGG | - | chr2.2:30045134-30045153 | None:intergenic | 40.0% | |
| GTGAACTTCTGTATGCTACA+CGG | - | chr2.2:30045803-30045822 | None:intergenic | 40.0% | |
| GTTTGTATATATCTGGGAGC+AGG | + | chr2.2:30045034-30045053 | MS.gene83326:intron | 40.0% | |
| GTTTGTGTGCAGCAAAGTTT+GGG | + | chr2.2:30044357-30044376 | MS.gene83326:intron | 40.0% | |
| TAACAGTCAAAGTCTCGAGA+AGG | - | chr2.2:30042614-30042633 | None:intergenic | 40.0% | |
| TAGTTGAGAAGTCATTTGGC+TGG | - | chr2.2:30043685-30043704 | None:intergenic | 40.0% | |
| TATTCTGATGGTTCCATCCT+CGG | - | chr2.2:30046322-30046341 | None:intergenic | 40.0% | |
| TCAGAGGGTTTATCACCAAA+TGG | + | chr2.2:30046372-30046391 | MS.gene83326:CDS | 40.0% | |
| TCTAGGCATGCACACTTTAA+TGG | - | chr2.2:30044585-30044604 | None:intergenic | 40.0% | |
| TGATGATCTTGGTTAGGGAT+GGG | + | chr2.2:30043444-30043463 | MS.gene83326:intron | 40.0% | |
| TTTATCACCAAATGGAACCC+TGG | + | chr2.2:30046380-30046399 | MS.gene83326:CDS | 40.0% | |
| ! | AACTGACTCATGCTTTGTAG+GGG | - | chr2.2:30045842-30045861 | None:intergenic | 40.0% |
| ! | ACAGGGTGGTTTGTAATTTC+TGG | - | chr2.2:30042998-30043017 | None:intergenic | 40.0% |
| ! | ACTGTACCTCTTGTTTGTCA+CGG | + | chr2.2:30040657-30040676 | MS.gene83326:CDS | 40.0% |
| ! | AGTTCATGTACTGATATGGG+AGG | + | chr2.2:30045203-30045222 | MS.gene83326:CDS | 40.0% |
| ! | ATTTGCCTTCTCCTTTTCCA+GGG | - | chr2.2:30046400-30046419 | None:intergenic | 40.0% |
| ! | CGATTTAGTGTAATGGGGTT+GGG | + | chr2.2:30041993-30042012 | MS.gene83326:intron | 40.0% |
| ! | CTAACTGACTCATGCTTTGT+AGG | - | chr2.2:30045844-30045863 | None:intergenic | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | + | chr2.2:30043873-30043892 | MS.gene83326:intron | 40.0% |
| ! | GGAACATTTGAAGGGCATAA+AGG | + | chr2.2:30041025-30041044 | MS.gene83326:CDS | 40.0% |
| ! | TCACCTGTGATTTTCAGCTA+TGG | + | chr2.2:30045582-30045601 | MS.gene83326:intron | 40.0% |
| ! | TGAGGGTTTTCATATTGCAG+AGG | + | chr2.2:30046446-30046465 | MS.gene83326:CDS | 40.0% |
| ! | TGCTGTTTGGAGTTGTTGTT+TGG | + | chr2.2:30041048-30041067 | MS.gene83326:CDS | 40.0% |
| !! | GTGTTGACGAATGTTTTCAG+AGG | + | chr2.2:30043469-30043488 | MS.gene83326:intron | 40.0% |
| !! | TGGTAACAAGTTTGTTGCTG+GGG | + | chr2.2:30045665-30045684 | MS.gene83326:CDS | 40.0% |
| !!! | TTTTTTTTTCTAACCCCCCG+CGG | + | chr2.2:30042058-30042077 | MS.gene83326:intron | 40.0% |
| AAAGGAGAAGGCAAATGCAG+AGG | + | chr2.2:30046404-30046423 | MS.gene83326:CDS | 45.0% | |
| ACCAAATGGAACCCTGGAAA+AGG | + | chr2.2:30046386-30046405 | MS.gene83326:CDS | 45.0% | |
| ACCATCAGAATATGGCAGAC+AGG | + | chr2.2:30046330-30046349 | MS.gene83326:CDS | 45.0% | |
| ACTAATGCAGGGGAACTTCA+TGG | - | chr2.2:30044189-30044208 | None:intergenic | 45.0% | |
| AGCAAAGCAAGCACATGATG+AGG | - | chr2.2:30041683-30041702 | None:intergenic | 45.0% | |
| AGGAAAAAAGTGGACGTGGT+TGG | - | chr2.2:30042122-30042141 | None:intergenic | 45.0% | |
| AGGCTATGGGATGTAAGAAC+TGG | + | chr2.2:30045375-30045394 | MS.gene83326:intron | 45.0% | |
| ATAAATCCCCTGGTTCAGTC+AGG | + | chr2.2:30045144-30045163 | MS.gene83326:CDS | 45.0% | |
| ATGAATGCAAGTGCACGTGT+TGG | - | chr2.2:30041383-30041402 | None:intergenic | 45.0% | |
| CAAGCACATGATGAGGAAGT+GGG | - | chr2.2:30041676-30041695 | None:intergenic | 45.0% | |
| CAAGTCCAAAGGAAAGGAAG+AGG | + | chr2.2:30046473-30046492 | MS.gene83326:CDS | 45.0% | |
| CACCTTCCAGAAGCAATGTT+GGG | - | chr2.2:30043300-30043319 | None:intergenic | 45.0% | |
| CATGTGCTTGCTTTGCTCAT+TGG | + | chr2.2:30041686-30041705 | MS.gene83326:intron | 45.0% | |
| CATTTGGCTGGAATCACTGT+GGG | - | chr2.2:30043673-30043692 | None:intergenic | 45.0% | |
| CCATCAGAATATGGCAGACA+GGG | + | chr2.2:30046331-30046350 | MS.gene83326:CDS | 45.0% | |
| CTATGACATGCCTTGCAATG+TGG | + | chr2.2:30045617-30045636 | MS.gene83326:CDS | 45.0% | |
| CTCACTTCAGCACTAGTCAT+AGG | - | chr2.2:30045432-30045451 | None:intergenic | 45.0% | |
| CTCTTCCTTTCCTTTGGACT+TGG | - | chr2.2:30046475-30046494 | None:intergenic | 45.0% | |
| GAAAAAAGTGGACGTGGTTG+GGG | - | chr2.2:30042120-30042139 | None:intergenic | 45.0% | |
| GCACGTGTTGGATGTTTATC+CGG | - | chr2.2:30041371-30041390 | None:intergenic | 45.0% | |
| GCATGCAACAAAGGACATCA+TGG | + | chr2.2:30046243-30046262 | MS.gene83326:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr2.2:30043850-30043869 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr2.2:30043853-30043872 | None:intergenic | 45.0% | |
| GGAAAAAAGTGGACGTGGTT+GGG | - | chr2.2:30042121-30042140 | None:intergenic | 45.0% | |
| GGCCAACTGTCAACATAGTA+TGG | - | chr2.2:30045250-30045269 | None:intergenic | 45.0% | |
| GGCGTGCATAATTATCAGGT+TGG | - | chr2.2:30041803-30041822 | None:intergenic | 45.0% | |
| GGTTTGTGTGCAGCAAAGTT+TGG | + | chr2.2:30044356-30044375 | MS.gene83326:intron | 45.0% | |
| TACAGTCCTGTTACTCCTGA+TGG | + | chr2.2:30040708-30040727 | MS.gene83326:CDS | 45.0% | |
| TACGGTGTTCTATCTGGTGA+TGG | + | chr2.2:30046218-30046237 | MS.gene83326:intron | 45.0% | |
| TAGATGCTAGTCCTATGCTG+AGG | + | chr2.2:30040978-30040997 | MS.gene83326:intron | 45.0% | |
| TAGGGGGGAAAAGTTGAAAC+TGG | - | chr2.2:30045825-30045844 | None:intergenic | 45.0% | |
| TCATTTGGCTGGAATCACTG+TGG | - | chr2.2:30043674-30043693 | None:intergenic | 45.0% | |
| TGAGCAAGGACTGAGTGTAT+GGG | + | chr2.2:30044780-30044799 | MS.gene83326:intron | 45.0% | |
| TGATGCACCTCCTAAAGAAG+TGG | + | chr2.2:30045121-30045140 | MS.gene83326:CDS | 45.0% | |
| TGGCAGAATGCAATGTGTAG+CGG | - | chr2.2:30044169-30044188 | None:intergenic | 45.0% | |
| TTCGAGGAAAAAAGTGGACG+TGG | - | chr2.2:30042126-30042145 | None:intergenic | 45.0% | |
| TTGAGCAAGGACTGAGTGTA+TGG | + | chr2.2:30044779-30044798 | MS.gene83326:intron | 45.0% | |
| TTGGGCACTACATCTCTTCA+TGG | - | chr2.2:30043222-30043241 | None:intergenic | 45.0% | |
| ! | ACTGACTCATGCTTTGTAGG+GGG | - | chr2.2:30045841-30045860 | None:intergenic | 45.0% |
| ! | ACTTCTTTAGGAGGTGCATC+AGG | - | chr2.2:30045122-30045141 | None:intergenic | 45.0% |
| ! | ATACCCACCTTTTGCTCACT+GGG | + | chr2.2:30045057-30045076 | MS.gene83326:CDS | 45.0% |
| ! | ATGTGATGGAACAGTAGGCT+AGG | - | chr2.2:30041758-30041777 | None:intergenic | 45.0% |
| ! | CATTTGCCTTCTCCTTTTCC+AGG | - | chr2.2:30046401-30046420 | None:intergenic | 45.0% |
| ! | CCGATTTAGTGTAATGGGGT+TGG | + | chr2.2:30041992-30042011 | MS.gene83326:intron | 45.0% |
| ! | GAAGCTGATTCCACATTGCA+AGG | - | chr2.2:30045630-30045649 | None:intergenic | 45.0% |
| ! | GGGTTTTCATATTGCAGAGG+AGG | + | chr2.2:30046449-30046468 | MS.gene83326:CDS | 45.0% |
| ! | GTTTTCAGAGGCAAGTAGTG+AGG | + | chr2.2:30043481-30043500 | MS.gene83326:intron | 45.0% |
| ! | TCCTTTTCCAGGGTTCCATT+TGG | - | chr2.2:30046390-30046409 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr2.2:30043884-30043903 | MS.gene83326:intron | 45.0% |
| !! | AAGGGCATAAAGGTGCTGTT+TGG | + | chr2.2:30041035-30041054 | MS.gene83326:CDS | 45.0% |
| !! | GGTAACAAGTTTGTTGCTGG+GGG | + | chr2.2:30045666-30045685 | MS.gene83326:CDS | 45.0% |
| !!! | CAGAGCATGTGCTTTTTCTG+AGG | + | chr2.2:30044429-30044448 | MS.gene83326:CDS | 45.0% |
| AACACTCCTGACTGAACCAG+GGG | - | chr2.2:30045153-30045172 | None:intergenic | 50.0% | |
| ACAGAAGAAAGGGACCAGAC+TGG | + | chr2.2:30043341-30043360 | MS.gene83326:intron | 50.0% | |
| AGCACTAGTCATAGGCGACT+TGG | - | chr2.2:30045424-30045443 | None:intergenic | 50.0% | |
| ATCGTATGCATCAGGATCCG+AGG | + | chr2.2:30046302-30046321 | MS.gene83326:CDS | 50.0% | |
| ATGCTGAGGAATGGAGAGAC+TGG | + | chr2.2:30040992-30041011 | MS.gene83326:CDS | 50.0% | |
| ATGGTCCTGTACACTGTGTC+CGG | + | chr2.2:30046262-30046281 | MS.gene83326:CDS | 50.0% | |
| ATGTTACAAGTGGCTGGGTG+TGG | - | chr2.2:30043022-30043041 | None:intergenic | 50.0% | |
| ATTCTCCTCCAGGAGAGAAC+CGG | - | chr2.2:30046284-30046303 | None:intergenic | 50.0% | |
| CAACACTCCTGACTGAACCA+GGG | - | chr2.2:30045154-30045173 | None:intergenic | 50.0% | |
| CACCCAACATTGCTTCTGGA+AGG | + | chr2.2:30043295-30043314 | MS.gene83326:intron | 50.0% | |
| CACTCGTGAAGTTCAAGTCC+TGG | - | chr2.2:30043905-30043924 | None:intergenic | 50.0% | |
| CCACCTTCCAGAAGCAATGT+TGG | - | chr2.2:30043301-30043320 | None:intergenic | 50.0% | |
| CCAGAAGCAATGTTGGGTGT+GGG | - | chr2.2:30043294-30043313 | None:intergenic | 50.0% | |
| CCCTGTCTGCCATATTCTGA+TGG | - | chr2.2:30046334-30046353 | None:intergenic | 50.0% | |
| CTGACTCATGCTTTGTAGGG+GGG | - | chr2.2:30045840-30045859 | None:intergenic | 50.0% | |
| GAGTGACCGTGACAAACAAG+AGG | - | chr2.2:30040666-30040685 | None:intergenic | 50.0% | |
| GATGCATACGATTCTCCTCC+AGG | - | chr2.2:30046294-30046313 | None:intergenic | 50.0% | |
| GCAAGCACATGATGAGGAAG+TGG | - | chr2.2:30041677-30041696 | None:intergenic | 50.0% | |
| GCTAGTCCTATGCTGAGGAA+TGG | + | chr2.2:30040983-30041002 | MS.gene83326:CDS | 50.0% | |
| GCTTCGTTAGAGCCCAAGTT+TGG | + | chr2.2:30045645-30045664 | MS.gene83326:CDS | 50.0% | |
| GGAATGGAGAGACTGGAGAT+TGG | + | chr2.2:30040999-30041018 | MS.gene83326:CDS | 50.0% | |
| GGAGAGACTGGAGATTGGAT+TGG | + | chr2.2:30041004-30041023 | MS.gene83326:CDS | 50.0% | |
| GGAGGAGAATCGTATGCATC+AGG | + | chr2.2:30046294-30046313 | MS.gene83326:CDS | 50.0% | |
| GTCCAAAGGAAAGGAAGAGG+CGG | + | chr2.2:30046476-30046495 | MS.gene83326:CDS | 50.0% | |
| GTCTCTCCATTCCTCAGCAT+AGG | - | chr2.2:30040992-30041011 | None:intergenic | 50.0% | |
| GTGATGGCAGCATGCAACAA+AGG | + | chr2.2:30046234-30046253 | MS.gene83326:intron | 50.0% | |
| TACCAATCTCATCGCCCGTA+TGG | - | chr2.2:30045722-30045741 | None:intergenic | 50.0% | |
| TATGCATCAGGATCCGAGGA+TGG | + | chr2.2:30046306-30046325 | MS.gene83326:CDS | 50.0% | |
| TCCAAAGGAAAGGAAGAGGC+GGG | + | chr2.2:30046477-30046496 | MS.gene83326:CDS | 50.0% | |
| TCCAGAAGCAATGTTGGGTG+TGG | - | chr2.2:30043295-30043314 | None:intergenic | 50.0% | |
| TGAGGAAGTGGGATCCAGTA+TGG | - | chr2.2:30041665-30041684 | None:intergenic | 50.0% | |
| TGATTGTGACCCCAGTGTCT+AGG | + | chr2.2:30043526-30043545 | MS.gene83326:intron | 50.0% | |
| TGCATCAAATACACCCGGTG+TGG | - | chr2.2:30043577-30043596 | None:intergenic | 50.0% | |
| TGGAACCCTGGAAAAGGAGA+AGG | + | chr2.2:30046392-30046411 | MS.gene83326:CDS | 50.0% | |
| TGGGGTCACAATCACTGTTG+TGG | - | chr2.2:30043520-30043539 | None:intergenic | 50.0% | |
| TGTTACAAGTGGCTGGGTGT+GGG | - | chr2.2:30043021-30043040 | None:intergenic | 50.0% | |
| TTCCATACGGGCGATGAGAT+TGG | + | chr2.2:30045717-30045736 | MS.gene83326:CDS | 50.0% | |
| ! | AGTGCTGAAGTGAGTCAGGA+TGG | + | chr2.2:30045438-30045457 | MS.gene83326:CDS | 50.0% |
| ! | CCAACATTGCTTCTGGAAGG+TGG | + | chr2.2:30043298-30043317 | MS.gene83326:intron | 50.0% |
| ! | GACTAGTGCTGAAGTGAGTC+AGG | + | chr2.2:30045434-30045453 | MS.gene83326:CDS | 50.0% |
| ! | GATACCCACCTTTTGCTCAC+TGG | + | chr2.2:30045056-30045075 | MS.gene83326:CDS | 50.0% |
| ! | TACCCACCTTTTGCTCACTG+GGG | + | chr2.2:30045058-30045077 | MS.gene83326:CDS | 50.0% |
| ! | TGCGATTGGTTGTTCCAGTC+TGG | - | chr2.2:30043358-30043377 | None:intergenic | 50.0% |
| !! | GTTCAGTCAGGAGTGTTGCA+TGG | + | chr2.2:30045156-30045175 | MS.gene83326:CDS | 50.0% |
| !!! | TGGGGAAAGGGGGGTATTTT+TGG | - | chr2.2:30042102-30042121 | None:intergenic | 50.0% |
| AAGTGGACGTGGTTGGGGAA+AGG | - | chr2.2:30042115-30042134 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr2.2:30043809-30043828 | MS.gene83326:intron | 55.0% | |
| ACTGTGTCCCTTCCTCCTAG+TGG | + | chr2.2:30041732-30041751 | MS.gene83326:intron | 55.0% | |
| AGTGGACGTGGTTGGGGAAA+GGG | - | chr2.2:30042114-30042133 | None:intergenic | 55.0% | |
| ATGTTGGGTGTGGGACAGTG+TGG | - | chr2.2:30043285-30043304 | None:intergenic | 55.0% | |
| CAAAGGAAAGGAAGAGGCGG+GGG | + | chr2.2:30046479-30046498 | MS.gene83326:CDS | 55.0% | |
| CCAAAGGAAAGGAAGAGGCG+GGG | + | chr2.2:30046478-30046497 | MS.gene83326:CDS | 55.0% | |
| CCCACACCCAACATTGCTTC+TGG | + | chr2.2:30043291-30043310 | MS.gene83326:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr2.2:30043810-30043829 | MS.gene83326:intron | 55.0% | |
| GAACAGTAGGCTAGGCCACT+AGG | - | chr2.2:30041750-30041769 | None:intergenic | 55.0% | |
| GAAGGCAAATGCAGAGGAGG+AGG | + | chr2.2:30046410-30046429 | MS.gene83326:CDS | 55.0% | |
| GAGAACCGGACACAGTGTAC+AGG | - | chr2.2:30046270-30046289 | None:intergenic | 55.0% | |
| GAGGTTTCGCGCAGGATTGA+GGG | + | chr2.2:30046429-30046448 | MS.gene83326:CDS | 55.0% | |
| GCAACACTCCTGACTGAACC+AGG | - | chr2.2:30045155-30045174 | None:intergenic | 55.0% | |
| GGAGAAGGCAAATGCAGAGG+AGG | + | chr2.2:30046407-30046426 | MS.gene83326:CDS | 55.0% | |
| GGAGGCCAAGTCCAAAGGAA+AGG | + | chr2.2:30046467-30046486 | MS.gene83326:CDS | 55.0% | |
| GGCTGGAATCACTGTGGGAT+TGG | - | chr2.2:30043668-30043687 | None:intergenic | 55.0% | |
| TCCACGCATAGTGACCACAC+CGG | + | chr2.2:30043560-30043579 | MS.gene83326:intron | 55.0% | |
| TCCCCCAGTGAGCAAAAGGT+GGG | - | chr2.2:30045063-30045082 | None:intergenic | 55.0% | |
| TGCTGGGGGAGAAGACTTGT+GGG | + | chr2.2:30045680-30045699 | MS.gene83326:CDS | 55.0% | |
| TTGCTGGGGGAGAAGACTTG+TGG | + | chr2.2:30045679-30045698 | MS.gene83326:CDS | 55.0% | |
| ! | ACCCACCTTTTGCTCACTGG+GGG | + | chr2.2:30045059-30045078 | MS.gene83326:CDS | 55.0% |
| !! | GCGACTTGGTGTCAAGTGTC+TGG | - | chr2.2:30045410-30045429 | None:intergenic | 55.0% |
| !! | GTACTGATATGGGAGGCGTC+AGG | + | chr2.2:30045210-30045229 | MS.gene83326:CDS | 55.0% |
| AAGTGGCTGGGTGTGGGACA+GGG | - | chr2.2:30043015-30043034 | None:intergenic | 60.0% | |
| AGGCTAGGCCACTAGGAGGA+AGG | - | chr2.2:30041743-30041762 | None:intergenic | 60.0% | |
| CACTGTGTCCGGTTCTCTCC+TGG | + | chr2.2:30046273-30046292 | MS.gene83326:CDS | 60.0% | |
| CAGTAGGCTAGGCCACTAGG+AGG | - | chr2.2:30041747-30041766 | None:intergenic | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr2.2:30043822-30043841 | MS.gene83326:intron | 60.0% | |
| CCACGCATAGTGACCACACC+GGG | + | chr2.2:30043561-30043580 | MS.gene83326:intron | 60.0% | |
| CCCCGCCTCTTCCTTTCCTT+TGG | - | chr2.2:30046481-30046500 | None:intergenic | 60.0% | |
| CTCCCCCAGTGAGCAAAAGG+TGG | - | chr2.2:30045064-30045083 | None:intergenic | 60.0% | |
| CTGCTCCCCCAGTGAGCAAA+AGG | - | chr2.2:30045067-30045086 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr2.2:30043822-30043841 | None:intergenic | 60.0% | |
| GCAGAGGAGGCCAAGTCCAA+AGG | + | chr2.2:30046462-30046481 | MS.gene83326:CDS | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr2.2:30043821-30043840 | MS.gene83326:intron | 60.0% | |
| GGAGGTTTCGCGCAGGATTG+AGG | + | chr2.2:30046428-30046447 | MS.gene83326:CDS | 60.0% | |
| GGCTAGGCCACTAGGAGGAA+GGG | - | chr2.2:30041742-30041761 | None:intergenic | 60.0% | |
| GTGGACGTGGTTGGGGAAAG+GGG | - | chr2.2:30042113-30042132 | None:intergenic | 60.0% | |
| TGGACGTGGTTGGGGAAAGG+GGG | - | chr2.2:30042112-30042131 | None:intergenic | 60.0% | |
| TGTGTCCGGTTCTCTCCTGG+AGG | + | chr2.2:30046276-30046295 | MS.gene83326:CDS | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr2.2:30043821-30043840 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr2.2:30043805-30043824 | None:intergenic | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr2.2:30043837-30043856 | None:intergenic | 60.0% |
| ! | GTGTAATGGGGTTGGGCGCT+CGG | + | chr2.2:30042000-30042019 | MS.gene83326:intron | 60.0% |
| AAAAAGAGCGGCGAGCCGCG+GGG | - | chr2.2:30042076-30042095 | None:intergenic | 65.0% | |
| AGGAAAGGAAGAGGCGGGGG+TGG | + | chr2.2:30046482-30046501 | MS.gene83326:CDS | 65.0% | |
| CAAAAAGAGCGGCGAGCCGC+GGG | - | chr2.2:30042077-30042096 | None:intergenic | 65.0% | |
| CAAGGATCACAGCGCAGCCG+TGG | + | chr2.2:30043611-30043630 | MS.gene83326:intron | 65.0% | |
| CAAGTGGCTGGGTGTGGGAC+AGG | - | chr2.2:30043016-30043035 | None:intergenic | 65.0% | |
| CAGAGGAGGAGGTTTCGCGC+AGG | + | chr2.2:30046421-30046440 | MS.gene83326:CDS | 65.0% | |
| CCCGGTGTGGTCACTATGCG+TGG | - | chr2.2:30043564-30043583 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr2.2:30043820-30043839 | MS.gene83326:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr2.2:30043835-30043854 | MS.gene83326:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr2.2:30043816-30043835 | MS.gene83326:intron | 65.0% | |
| GCAAAAAGAGCGGCGAGCCG+CGG | - | chr2.2:30042078-30042097 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr2.2:30043815-30043834 | MS.gene83326:intron | 65.0% | |
| GGACGTGGTTGGGGAAAGGG+GGG | - | chr2.2:30042111-30042130 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr2.2:30043804-30043823 | None:intergenic | 65.0% |
| AAAAGAGCGGCGAGCCGCGG+GGG | - | chr2.2:30042075-30042094 | None:intergenic | 70.0% | |
| GGATCACAGCGCAGCCGTGG+TGG | + | chr2.2:30043614-30043633 | MS.gene83326:intron | 70.0% | |
| TGGCTGGGTGTGGGACAGGG+TGG | - | chr2.2:30043012-30043031 | None:intergenic | 70.0% | |
| AAAGAGCGGCGAGCCGCGGG+GGG | - | chr2.2:30042074-30042093 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 30040639 | 30046512 | 30040639 | ID=MS.gene83326 |
| chr2.2 | mRNA | 30040639 | 30046512 | 30040639 | ID=MS.gene83326.t1;Parent=MS.gene83326 |
| chr2.2 | exon | 30040639 | 30040756 | 30040639 | ID=MS.gene83326.t1.exon1;Parent=MS.gene83326.t1 |
| chr2.2 | CDS | 30040639 | 30040756 | 30040639 | ID=cds.MS.gene83326.t1;Parent=MS.gene83326.t1 |
| chr2.2 | exon | 30040981 | 30041116 | 30040981 | ID=MS.gene83326.t1.exon2;Parent=MS.gene83326.t1 |
| chr2.2 | CDS | 30040981 | 30041116 | 30040981 | ID=cds.MS.gene83326.t1;Parent=MS.gene83326.t1 |
| chr2.2 | exon | 30044369 | 30044450 | 30044369 | ID=MS.gene83326.t1.exon3;Parent=MS.gene83326.t1 |
| chr2.2 | CDS | 30044369 | 30044450 | 30044369 | ID=cds.MS.gene83326.t1;Parent=MS.gene83326.t1 |
| chr2.2 | exon | 30045056 | 30045231 | 30045056 | ID=MS.gene83326.t1.exon4;Parent=MS.gene83326.t1 |
| chr2.2 | CDS | 30045056 | 30045231 | 30045056 | ID=cds.MS.gene83326.t1;Parent=MS.gene83326.t1 |
| chr2.2 | exon | 30045377 | 30045514 | 30045377 | ID=MS.gene83326.t1.exon5;Parent=MS.gene83326.t1 |
| chr2.2 | CDS | 30045377 | 30045514 | 30045377 | ID=cds.MS.gene83326.t1;Parent=MS.gene83326.t1 |
| chr2.2 | exon | 30045599 | 30045738 | 30045599 | ID=MS.gene83326.t1.exon6;Parent=MS.gene83326.t1 |
| chr2.2 | CDS | 30045599 | 30045738 | 30045599 | ID=cds.MS.gene83326.t1;Parent=MS.gene83326.t1 |
| chr2.2 | exon | 30046244 | 30046512 | 30046244 | ID=MS.gene83326.t1.exon7;Parent=MS.gene83326.t1 |
| chr2.2 | CDS | 30046244 | 30046512 | 30046244 | ID=cds.MS.gene83326.t1;Parent=MS.gene83326.t1 |
| Gene Sequence |
| Protein sequence |
