Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023557.t1 | XP_003629745.1 | 99 | 301 | 3 | 0 | 1 | 301 | 1 | 301 | 7.30E-168 | 599.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023557.t1 | Q9C5M0 | 83.2 | 298 | 48 | 1 | 4 | 301 | 3 | 298 | 2.4e-143 | 509.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023557.t1 | G7LIP6 | 99.0 | 301 | 3 | 0 | 1 | 301 | 1 | 301 | 5.2e-168 | 599.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037607 | MS.gene023557 | PPI |
| MS.gene023557 | MS.gene49818 | PPI |
| MS.gene023557 | MS.gene07162 | PPI |
| MS.gene048336 | MS.gene023557 | PPI |
| MS.gene005651 | MS.gene023557 | PPI |
| MS.gene023557 | MS.gene87922 | PPI |
| MS.gene023557 | MS.gene99446 | PPI |
| MS.gene86246 | MS.gene023557 | PPI |
| MS.gene023557 | MS.gene03010 | PPI |
| MS.gene027755 | MS.gene023557 | PPI |
| MS.gene20684 | MS.gene023557 | PPI |
| MS.gene023557 | MS.gene065200 | PPI |
| MS.gene023557 | MS.gene001110 | PPI |
| MS.gene008904 | MS.gene023557 | PPI |
| MS.gene023557 | MS.gene84655 | PPI |
| MS.gene023557 | MS.gene90775 | PPI |
| MS.gene21596 | MS.gene023557 | PPI |
| MS.gene023557 | MS.gene29137 | PPI |
| MS.gene023557 | MS.gene21371 | PPI |
| MS.gene023557 | MS.gene44265 | PPI |
| MS.gene005718 | MS.gene023557 | PPI |
| MS.gene023557 | MS.gene010661 | PPI |
| MS.gene023557 | MS.gene73296 | PPI |
| MS.gene023557 | MS.gene47310 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023557.t1 | MTR_8g086070 | 99.003 | 301 | 3 | 0 | 1 | 301 | 1 | 301 | 0.0 | 612 |
| MS.gene023557.t1 | MTR_8g086070 | 99.052 | 211 | 2 | 0 | 1 | 211 | 1 | 211 | 1.92e-151 | 422 |
| MS.gene023557.t1 | MTR_5g032420 | 37.963 | 324 | 155 | 4 | 18 | 299 | 3 | 322 | 4.41e-64 | 204 |
| MS.gene023557.t1 | MTR_8g068890 | 39.062 | 320 | 150 | 6 | 18 | 299 | 3 | 315 | 2.40e-61 | 197 |
| MS.gene023557.t1 | MTR_3g100570 | 37.421 | 318 | 156 | 6 | 18 | 299 | 3 | 313 | 1.19e-60 | 196 |
| MS.gene023557.t1 | MTR_7g066690 | 33.000 | 300 | 166 | 6 | 21 | 297 | 13 | 300 | 2.02e-40 | 143 |
| MS.gene023557.t1 | MTR_7g066690 | 25.128 | 195 | 125 | 4 | 16 | 199 | 116 | 300 | 2.29e-11 | 63.9 |
| MS.gene023557.t1 | MTR_4g018750 | 32.441 | 299 | 178 | 5 | 14 | 298 | 11 | 299 | 9.24e-40 | 141 |
| MS.gene023557.t1 | MTR_1g090330 | 33.333 | 279 | 174 | 5 | 27 | 295 | 20 | 296 | 1.18e-39 | 140 |
| MS.gene023557.t1 | MTR_8g086120 | 59.016 | 122 | 45 | 2 | 162 | 283 | 9 | 125 | 1.56e-39 | 137 |
| MS.gene023557.t1 | MTR_4g018750 | 31.293 | 294 | 170 | 8 | 14 | 291 | 11 | 288 | 1.03e-33 | 125 |
| MS.gene023557.t1 | MTR_8g086430 | 55.435 | 92 | 40 | 1 | 207 | 298 | 1 | 91 | 4.18e-28 | 106 |
| MS.gene023557.t1 | MTR_1g088995 | 28.920 | 287 | 179 | 8 | 21 | 295 | 33 | 306 | 9.05e-27 | 107 |
| MS.gene023557.t1 | MTR_3g462140 | 28.417 | 278 | 176 | 4 | 33 | 295 | 28 | 297 | 1.73e-24 | 100 |
| MS.gene023557.t1 | MTR_3g462140 | 28.409 | 176 | 107 | 4 | 34 | 199 | 133 | 299 | 7.03e-13 | 68.2 |
| MS.gene023557.t1 | MTR_8g086420 | 75.000 | 56 | 14 | 0 | 207 | 262 | 1 | 56 | 6.13e-22 | 87.4 |
| MS.gene023557.t1 | MTR_4g057850 | 26.936 | 297 | 199 | 10 | 17 | 299 | 15 | 307 | 4.95e-20 | 88.6 |
| MS.gene023557.t1 | MTR_4g012850 | 26.718 | 262 | 175 | 6 | 14 | 263 | 3 | 259 | 5.67e-20 | 88.6 |
| MS.gene023557.t1 | MTR_8g086160 | 54.667 | 75 | 26 | 2 | 216 | 289 | 32 | 99 | 5.75e-20 | 83.6 |
| MS.gene023557.t1 | MTR_1g088995 | 30.457 | 197 | 114 | 6 | 21 | 206 | 33 | 217 | 8.12e-15 | 72.8 |
| MS.gene023557.t1 | MTR_7g109135 | 22.819 | 298 | 197 | 8 | 23 | 299 | 24 | 309 | 2.62e-14 | 72.4 |
| MS.gene023557.t1 | MTR_7g084400 | 24.913 | 289 | 184 | 7 | 21 | 294 | 213 | 483 | 4.45e-14 | 72.8 |
| MS.gene023557.t1 | MTR_8g086080 | 39.796 | 98 | 49 | 2 | 190 | 285 | 63 | 152 | 2.53e-13 | 67.4 |
| MS.gene023557.t1 | MTR_2g102010 | 27.143 | 280 | 184 | 8 | 19 | 288 | 15 | 284 | 4.26e-13 | 68.9 |
| MS.gene023557.t1 | MTR_7g109135 | 22.789 | 294 | 195 | 8 | 23 | 299 | 24 | 302 | 4.89e-13 | 68.9 |
| MS.gene023557.t1 | MTR_3g098460 | 32.934 | 167 | 98 | 6 | 24 | 181 | 302 | 463 | 9.09e-13 | 68.6 |
| MS.gene023557.t1 | MTR_3g098460 | 23.592 | 284 | 201 | 8 | 19 | 294 | 203 | 478 | 1.10e-12 | 68.6 |
| MS.gene023557.t1 | MTR_6g034515 | 26.108 | 203 | 131 | 4 | 20 | 210 | 159 | 354 | 1.22e-12 | 67.8 |
| MS.gene023557.t1 | MTR_5g009500 | 21.104 | 308 | 212 | 5 | 8 | 287 | 25 | 329 | 7.53e-12 | 65.5 |
| MS.gene023557.t1 | MTR_8g098240 | 26.455 | 189 | 120 | 6 | 22 | 204 | 414 | 589 | 2.49e-11 | 64.7 |
| MS.gene023557.t1 | MTR_1g087840 | 24.555 | 281 | 177 | 11 | 37 | 295 | 35 | 302 | 4.51e-11 | 62.8 |
| MS.gene023557.t1 | MTR_3g107510 | 25.926 | 162 | 114 | 2 | 21 | 179 | 216 | 374 | 6.81e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023557.t1 | AT5G19760 | 83.056 | 301 | 48 | 2 | 1 | 301 | 1 | 298 | 0.0 | 524 |
| MS.gene023557.t1 | AT4G24570 | 38.871 | 319 | 150 | 7 | 18 | 299 | 3 | 313 | 4.41e-63 | 202 |
| MS.gene023557.t1 | AT2G22500 | 38.291 | 316 | 154 | 7 | 18 | 299 | 3 | 311 | 1.91e-56 | 185 |
| MS.gene023557.t1 | AT5G09470 | 37.591 | 274 | 157 | 5 | 33 | 298 | 67 | 334 | 1.34e-48 | 165 |
| MS.gene023557.t1 | AT1G14140 | 35.034 | 294 | 172 | 7 | 16 | 295 | 11 | 299 | 2.66e-41 | 145 |
| MS.gene023557.t1 | AT5G58970 | 30.976 | 297 | 174 | 5 | 18 | 295 | 13 | 297 | 5.21e-40 | 142 |
| MS.gene023557.t1 | AT5G58970 | 26.596 | 188 | 107 | 5 | 27 | 198 | 126 | 298 | 9.72e-12 | 65.1 |
| MS.gene023557.t1 | AT3G54110 | 34.420 | 276 | 161 | 6 | 32 | 294 | 27 | 295 | 1.04e-39 | 141 |
| MS.gene023557.t1 | AT4G03115 | 30.492 | 305 | 188 | 10 | 2 | 295 | 17 | 308 | 1.20e-31 | 120 |
| MS.gene023557.t1 | AT5G58970 | 31.120 | 241 | 142 | 4 | 18 | 239 | 13 | 248 | 1.50e-31 | 119 |
| MS.gene023557.t1 | AT4G03115 | 30.492 | 305 | 188 | 10 | 2 | 295 | 49 | 340 | 2.14e-31 | 120 |
| MS.gene023557.t1 | AT4G03115 | 29.707 | 239 | 153 | 6 | 59 | 295 | 12 | 237 | 5.67e-25 | 100 |
| MS.gene023557.t1 | AT4G03115 | 29.707 | 239 | 153 | 6 | 59 | 295 | 20 | 245 | 7.58e-25 | 100 |
| MS.gene023557.t1 | AT5G01340 | 27.817 | 284 | 192 | 7 | 22 | 295 | 18 | 298 | 1.81e-22 | 95.5 |
| MS.gene023557.t1 | AT4G03115 | 32.558 | 215 | 123 | 8 | 2 | 206 | 17 | 219 | 3.20e-19 | 84.7 |
| MS.gene023557.t1 | AT4G03115 | 32.558 | 215 | 123 | 8 | 2 | 206 | 17 | 219 | 3.33e-19 | 84.7 |
| MS.gene023557.t1 | AT4G32400 | 21.951 | 287 | 206 | 7 | 16 | 295 | 109 | 384 | 9.45e-15 | 74.3 |
| MS.gene023557.t1 | AT5G51050 | 30.526 | 190 | 107 | 6 | 1 | 181 | 305 | 478 | 3.81e-13 | 70.1 |
| MS.gene023557.t1 | AT5G07320 | 30.120 | 166 | 99 | 6 | 24 | 181 | 303 | 459 | 6.55e-13 | 69.3 |
| MS.gene023557.t1 | AT5G46800 | 28.873 | 284 | 174 | 8 | 19 | 280 | 6 | 283 | 1.15e-12 | 67.8 |
| MS.gene023557.t1 | AT5G46800 | 28.873 | 284 | 174 | 8 | 19 | 280 | 6 | 283 | 1.15e-12 | 67.8 |
| MS.gene023557.t1 | AT5G46800 | 28.873 | 284 | 174 | 8 | 19 | 280 | 6 | 283 | 1.15e-12 | 67.8 |
| MS.gene023557.t1 | AT5G42130 | 26.316 | 171 | 121 | 3 | 15 | 180 | 205 | 375 | 5.52e-11 | 63.2 |
Find 89 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTGTTGCTGCTGGTTTC+TGG | 0.111154 | 4.3:-14468346 | MS.gene023557:CDS |
| CCTCAACCAGCTCCAGAAAT+TGG | 0.196597 | 4.3:-14463980 | MS.gene023557:CDS |
| GGAGAAAAGTTATGGGTTAT+AGG | 0.255079 | 4.3:-14463959 | None:intergenic |
| TTCGTCAATGGTGGTGCTTC+TGG | 0.275917 | 4.3:-14468308 | MS.gene023557:CDS |
| TTAGGTGCAAGTAGTGTATC+TGG | 0.278521 | 4.3:-14464324 | MS.gene023557:intron |
| CAGAAATTGGAGAAAAGTTA+TGG | 0.301655 | 4.3:-14463967 | MS.gene023557:CDS |
| TTCTTGCAGGGTCTATCAGC+TGG | 0.316238 | 4.3:-14467751 | MS.gene023557:intron |
| AGTTGGTAGTCCAGCTGATT+TGG | 0.324876 | 4.3:-14467284 | MS.gene023557:CDS |
| CTTTCACTGTGGAAAGGTGC+TGG | 0.335848 | 4.3:-14467157 | MS.gene023557:CDS |
| GGGCTGACTGCTGGTGCAAT+TGG | 0.358637 | 4.3:-14467313 | MS.gene023557:CDS |
| AAACTACACAAACGCCTTCC+AGG | 0.363434 | 4.3:-14467212 | MS.gene023557:CDS |
| GGGTGTTGGTGCTTTCTATA+AGG | 0.363669 | 4.3:-14468071 | MS.gene023557:intron |
| CTGCACGCCTTGGAACATTT+AGG | 0.364412 | 4.3:-14467702 | MS.gene023557:intron |
| TGGCAGGGGCTTGCCATCAT+TGG | 0.380343 | 4.3:+14467357 | None:intergenic |
| GGAAGGCGTTTGTGTAGTTT+CGG | 0.380503 | 4.3:+14467215 | None:intergenic |
| CCAATTTCTGGAGCTGGTTG+AGG | 0.389193 | 4.3:+14463980 | None:intergenic |
| AATTCAGGTTAGGATTCAAC+TGG | 0.396885 | 4.3:-14468140 | MS.gene023557:intron |
| GAAGGGTCCTCCAGATTTGA+AGG | 0.417928 | 4.3:+14464182 | None:intergenic |
| AGAAATTGGAGAAAAGTTAT+GGG | 0.426080 | 4.3:-14463966 | MS.gene023557:CDS |
| ACCATTGACGAAAGGCTTGA+TGG | 0.428395 | 4.3:+14468319 | None:intergenic |
| GCTGTCAAGACCTTCAAATC+TGG | 0.432966 | 4.3:-14464192 | MS.gene023557:CDS |
| CAGTCAAGAGAGCCGGTGTA+TGG | 0.437255 | 4.3:+14464216 | None:intergenic |
| GGCCAGAAACCAGCAGCAAC+AGG | 0.443267 | 4.3:+14468344 | None:intergenic |
| CATACCTTGATCATATCAAT+AGG | 0.451587 | 4.3:+14468260 | None:intergenic |
| TGAGTCTTCACATAATCAAA+TGG | 0.453835 | 4.3:+14464276 | None:intergenic |
| TACCGTATCGGTGCAGATGA+AGG | 0.455491 | 4.3:-14467184 | MS.gene023557:CDS |
| ACCATCAAGCCTTTCGTCAA+TGG | 0.457555 | 4.3:-14468320 | MS.gene023557:CDS |
| CACCGATACGGTAAAGTGCC+TGG | 0.473291 | 4.3:+14467194 | None:intergenic |
| TCAAAGTGTTGAGTTCTTCA+AGG | 0.476440 | 4.3:-14467080 | MS.gene023557:CDS |
| TTCAAGGATACCGTTGGTCT+AGG | 0.476717 | 4.3:-14467064 | MS.gene023557:CDS |
| GTCTATCAGCTGGGTTACTC+AGG | 0.478134 | 4.3:-14467741 | MS.gene023557:CDS |
| GATTCCCTGTCTACTGTGTC+AGG | 0.479793 | 4.3:-14464146 | MS.gene023557:CDS |
| TTTCACTGTGGAAAGGTGCT+GGG | 0.480851 | 4.3:-14467156 | MS.gene023557:CDS |
| TCAACCTATTGATATGATCA+AGG | 0.487786 | 4.3:-14468264 | MS.gene023557:intron |
| AAGCCTAAGCCTGTTGCTGC+TGG | 0.491227 | 4.3:-14468353 | MS.gene023557:CDS |
| TTCTACCATGCTTAAGAATG+AGG | 0.497892 | 4.3:-14468092 | MS.gene023557:CDS |
| CTTGACAAATAAAGCAATTG+AGG | 0.499499 | 4.3:-14467380 | MS.gene023557:CDS |
| ACTTACACCACTGCACGCCT+TGG | 0.499902 | 4.3:-14467712 | MS.gene023557:CDS |
| TTTGGCACTCATTCGTATGC+AGG | 0.500271 | 4.3:-14467266 | MS.gene023557:CDS |
| GACACAGTAGACAGGGAATC+CGG | 0.501193 | 4.3:+14464149 | None:intergenic |
| AAGAGCCATGGCATTGAACA+TGG | 0.503929 | 4.3:-14467122 | MS.gene023557:CDS |
| GAATCCGGTGTAAAATTTGA+AGG | 0.507310 | 4.3:+14464164 | None:intergenic |
| GCAATCCTGACACAGTAGAC+AGG | 0.508794 | 4.3:+14464141 | None:intergenic |
| ATCAGCTGGGTTACTCAGGC+AGG | 0.514032 | 4.3:-14467737 | MS.gene023557:CDS |
| GCTCTATGTGGGCTGACTGC+TGG | 0.520808 | 4.3:-14467322 | MS.gene023557:CDS |
| CGAATGAGTGCCAAATCAGC+TGG | 0.523817 | 4.3:+14467274 | None:intergenic |
| AAAGCAATTGAGGCCAATGA+TGG | 0.524756 | 4.3:-14467370 | MS.gene023557:CDS |
| TTCCAGGCACTTTACCGTAT+CGG | 0.534625 | 4.3:-14467196 | MS.gene023557:CDS |
| TCTTGCAGGGTCTATCAGCT+GGG | 0.537823 | 4.3:-14467750 | MS.gene023557:intron |
| CAGGATTGCTCCCCATGTCA+TGG | 0.543518 | 4.3:-14464127 | MS.gene023557:intron |
| TCCCTTCATCTGCACCGATA+CGG | 0.543890 | 4.3:+14467182 | None:intergenic |
| ACCGTATCGGTGCAGATGAA+GGG | 0.548027 | 4.3:-14467183 | MS.gene023557:CDS |
| AAACCAGCAGCAACAGGCTT+AGG | 0.550180 | 4.3:+14468350 | None:intergenic |
| TTGACGAAAGGCTTGATGGT+TGG | 0.552826 | 4.3:+14468323 | None:intergenic |
| CATCCCCATGTTCAATGCCA+TGG | 0.555090 | 4.3:+14467117 | None:intergenic |
| ACTGCTTATGGCAGATGACA+TGG | 0.559975 | 4.3:-14464008 | MS.gene023557:intron |
| GTTAGGATTCAACTGGGTCA+AGG | 0.566704 | 4.3:-14468133 | MS.gene023557:CDS |
| GAGTTCTTCAAGGATACCGT+TGG | 0.572249 | 4.3:-14467070 | MS.gene023557:CDS |
| GACAGCACAGTCAAGAGAGC+CGG | 0.574269 | 4.3:+14464209 | None:intergenic |
| AAAGATGCAACCTGATGCTG+AGG | 0.582204 | 4.3:-14464247 | MS.gene023557:CDS |
| TAGTTTCGGCGCTGAGCAAG+AGG | 0.584237 | 4.3:+14467229 | None:intergenic |
| ATCAATAGGTTGAATAACAC+AGG | 0.588855 | 4.3:+14468274 | None:intergenic |
| GGGATTCTTTCACTGTGGAA+AGG | 0.593663 | 4.3:-14467163 | MS.gene023557:CDS |
| AACACCCTCATTCTTAAGCA+TGG | 0.601421 | 4.3:+14468087 | None:intergenic |
| GTCAAGACCTTCAAATCTGG+AGG | 0.605904 | 4.3:-14464189 | MS.gene023557:CDS |
| AAGAGAATAGTACCATGACA+TGG | 0.606457 | 4.3:+14464115 | None:intergenic |
| AGAGCCATGGCATTGAACAT+GGG | 0.610100 | 4.3:-14467121 | MS.gene023557:CDS |
| AAATGTTCCAAGGCGTGCAG+TGG | 0.610327 | 4.3:+14467705 | None:intergenic |
| GAGCCATGGCATTGAACATG+GGG | 0.612866 | 4.3:-14467120 | MS.gene023557:CDS |
| ATCAAGCCTTTCGTCAATGG+TGG | 0.613468 | 4.3:-14468317 | MS.gene023557:CDS |
| AGAGAATAGTACCATGACAT+GGG | 0.614065 | 4.3:+14464116 | None:intergenic |
| TCTACCATGCTTAAGAATGA+GGG | 0.614254 | 4.3:-14468091 | MS.gene023557:CDS |
| AATCCGGTGTAAAATTTGAA+GGG | 0.616204 | 4.3:+14464165 | None:intergenic |
| CAATCCTGACACAGTAGACA+GGG | 0.622100 | 4.3:+14464142 | None:intergenic |
| CAACTCACCTAAATGTTCCA+AGG | 0.622902 | 4.3:+14467695 | None:intergenic |
| ATGAAGGGATTCTTTCACTG+TGG | 0.628478 | 4.3:-14467168 | MS.gene023557:CDS |
| GGTGAAATGACTACTGTGGT+TGG | 0.629754 | 4.3:-14467043 | MS.gene023557:intron |
| GATACGGTAAAGTGCCTGGA+AGG | 0.630447 | 4.3:+14467198 | None:intergenic |
| GCCATGGCTCTTACTACAGT+AGG | 0.638558 | 4.3:+14467133 | None:intergenic |
| GCCTACTGTAGTAAGAGCCA+TGG | 0.642788 | 4.3:-14467134 | MS.gene023557:CDS |
| GGTGCAATTGGAGCAACAGT+TGG | 0.654003 | 4.3:-14467301 | MS.gene023557:CDS |
| GAAGCACCACCATTGACGAA+AGG | 0.656464 | 4.3:+14468311 | None:intergenic |
| ATTCAGGTTAGGATTCAACT+GGG | 0.656898 | 4.3:-14468139 | MS.gene023557:intron |
| GAGGGAAAATATCCATACAC+CGG | 0.660454 | 4.3:-14464228 | MS.gene023557:CDS |
| AGTCATTTCACCTAGACCAA+CGG | 0.665426 | 4.3:+14467054 | None:intergenic |
| ATGCTTAAGAATGAGGGTGT+TGG | 0.674370 | 4.3:-14468085 | MS.gene023557:CDS |
| GAGAATAGTACCATGACATG+GGG | 0.680357 | 4.3:+14464117 | None:intergenic |
| AAGATGCAACCTGATGCTGA+GGG | 0.680874 | 4.3:-14464246 | MS.gene023557:CDS |
| TCTAGGTGAAATGACTACTG+TGG | 0.723327 | 4.3:-14467047 | MS.gene023557:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATTCATTTTTTTTAAC+TGG | - | chr4.3:14467145-14467164 | MS.gene023557:CDS | 10.0% |
| !!! | CTAATTTATTCTTTTATAAA+AGG | + | chr4.3:14465641-14465660 | None:intergenic | 10.0% |
| !!! | TAAATTCATTTTTTTTAACT+GGG | - | chr4.3:14467146-14467165 | MS.gene023557:CDS | 10.0% |
| !!! | TTTTTTTATATTGTTTACTT+TGG | - | chr4.3:14464468-14464487 | MS.gene023557:intron | 10.0% |
| !! | CAAAAAAAAACAAAAAAGAT+AGG | + | chr4.3:14467338-14467357 | None:intergenic | 15.0% |
| !! | TTCTGTTATCTATTAAAAAA+AGG | + | chr4.3:14466129-14466148 | None:intergenic | 15.0% |
| !!! | AATTAGTCAAACTTTTTATT+AGG | - | chr4.3:14465655-14465674 | MS.gene023557:intron | 15.0% |
| !!! | TTAATTTCAATTTTGTAACT+TGG | - | chr4.3:14466742-14466761 | MS.gene023557:intron | 15.0% |
| !! | AAACTAACAACAGTATATTA+TGG | - | chr4.3:14465886-14465905 | MS.gene023557:intron | 20.0% |
| !! | AAATCTAATATTGGATGATA+AGG | - | chr4.3:14466056-14466075 | MS.gene023557:intron | 20.0% |
| !! | AACATTTCCCTTTATAAAAA+GGG | + | chr4.3:14465445-14465464 | None:intergenic | 20.0% |
| !! | AACTAACAACAGTATATTAT+GGG | - | chr4.3:14465887-14465906 | MS.gene023557:intron | 20.0% |
| !! | AATCTAATATTGGATGATAA+GGG | - | chr4.3:14466057-14466076 | MS.gene023557:intron | 20.0% |
| !! | ATTGCAATATTCATCAAAAT+TGG | - | chr4.3:14464668-14464687 | MS.gene023557:intron | 20.0% |
| !! | ATTTATTGAGTCATTGTATT+TGG | - | chr4.3:14464498-14464517 | MS.gene023557:intron | 20.0% |
| !! | ATTTGATATGATGAATAAAG+GGG | + | chr4.3:14466213-14466232 | None:intergenic | 20.0% |
| !! | CATTTGATATGATGAATAAA+GGG | + | chr4.3:14466214-14466233 | None:intergenic | 20.0% |
| !! | GTGAAATTATAGTTTGATTA+AGG | + | chr4.3:14467545-14467564 | None:intergenic | 20.0% |
| !! | TAAAAACACAATGTAATTGT+AGG | + | chr4.3:14464774-14464793 | None:intergenic | 20.0% |
| !! | TAAAGGTAGAAAAAAAATCT+TGG | - | chr4.3:14465498-14465517 | MS.gene023557:intron | 20.0% |
| !! | TAACATTTCCCTTTATAAAA+AGG | + | chr4.3:14465446-14465465 | None:intergenic | 20.0% |
| !! | TATTGTATTTACTAGCTAAT+TGG | - | chr4.3:14466267-14466286 | MS.gene023557:intron | 20.0% |
| !!! | AAGGTTTTGAAATCTAATAT+TGG | - | chr4.3:14466047-14466066 | MS.gene023557:intron | 20.0% |
| !!! | ATAAAACATATCCTTTTGAA+TGG | + | chr4.3:14464819-14464838 | None:intergenic | 20.0% |
| !!! | ATCTAAGTGTAATTTGTTAA+GGG | + | chr4.3:14467197-14467216 | None:intergenic | 20.0% |
| !!! | ATTACCAATTTTCTTCTAAT+CGG | - | chr4.3:14467874-14467893 | MS.gene023557:intron | 20.0% |
| !!! | ATTGATTTTTTTATTGCCTT+TGG | - | chr4.3:14468239-14468258 | MS.gene023557:intron | 20.0% |
| !!! | TATTTCAGTTTTTTACAATC+AGG | + | chr4.3:14466416-14466435 | None:intergenic | 20.0% |
| !!! | TCTTTCATTTTTTGATGATT+TGG | - | chr4.3:14464109-14464128 | MS.gene023557:intron | 20.0% |
| !!! | TGTTTTTTTGTTTTGAATTC+AGG | - | chr4.3:14464173-14464192 | MS.gene023557:CDS | 20.0% |
| !!! | TTTTTGATGATTTGGTATTT+GGG | - | chr4.3:14464117-14464136 | MS.gene023557:intron | 20.0% |
| !!! | TTTTTTGATGATTTGGTATT+TGG | - | chr4.3:14464116-14464135 | MS.gene023557:intron | 20.0% |
| ! | AAATAGATACTATCTTGAGT+AGG | - | chr4.3:14466545-14466564 | MS.gene023557:intron | 25.0% |
| ! | AACAACCTAATAAACATTGA+TGG | - | chr4.3:14467405-14467424 | MS.gene023557:intron | 25.0% |
| ! | AAGATAATTGAAACAACATC+TGG | + | chr4.3:14464304-14464323 | None:intergenic | 25.0% |
| ! | AATAGATACTATCTTGAGTA+GGG | - | chr4.3:14466546-14466565 | MS.gene023557:intron | 25.0% |
| ! | ACATTTCCCTTTATAAAAAG+GGG | + | chr4.3:14465444-14465463 | None:intergenic | 25.0% |
| ! | ACTAACAACAGTATATTATG+GGG | - | chr4.3:14465888-14465907 | MS.gene023557:intron | 25.0% |
| ! | AGAAATCAGTCTTAATTTCA+TGG | - | chr4.3:14466634-14466653 | MS.gene023557:intron | 25.0% |
| ! | AGAAATTGGAGAAAAGTTAT+GGG | - | chr4.3:14468362-14468381 | MS.gene023557:CDS | 25.0% |
| ! | AGACTCAATTTATACAAGAT+TGG | + | chr4.3:14466707-14466726 | None:intergenic | 25.0% |
| ! | AGTGGCAATAAAAAATCTTA+AGG | - | chr4.3:14466028-14466047 | MS.gene023557:intron | 25.0% |
| ! | ATATTCATCAAAATTGGATC+TGG | - | chr4.3:14464674-14464693 | MS.gene023557:intron | 25.0% |
| ! | ATGAGTCAACAATATCAAAA+TGG | + | chr4.3:14465318-14465337 | None:intergenic | 25.0% |
| ! | ATGATAGAAACAAAAACATG+TGG | + | chr4.3:14467680-14467699 | None:intergenic | 25.0% |
| ! | ATTAATGTACACAATCCAAA+TGG | + | chr4.3:14467912-14467931 | None:intergenic | 25.0% |
| ! | ATTGTACCATAATCACAAAT+TGG | + | chr4.3:14467761-14467780 | None:intergenic | 25.0% |
| ! | ATTTCATCTTAGTTCATGTT+TGG | - | chr4.3:14466435-14466454 | MS.gene023557:intron | 25.0% |
| ! | ATTTGTGATTATGGTACAAT+CGG | - | chr4.3:14467761-14467780 | MS.gene023557:intron | 25.0% |
| ! | CCATTTGATATGATGAATAA+AGG | + | chr4.3:14466215-14466234 | None:intergenic | 25.0% |
| ! | CCTTTATTCATCATATCAAA+TGG | - | chr4.3:14466212-14466231 | MS.gene023557:intron | 25.0% |
| ! | GAGCTTAAATTAATCCAAAT+TGG | + | chr4.3:14466661-14466680 | None:intergenic | 25.0% |
| ! | TATTGTCAAACTTGACATTA+GGG | + | chr4.3:14466990-14467009 | None:intergenic | 25.0% |
| ! | TCAAGTTTATATACTGCTTA+TGG | - | chr4.3:14468308-14468327 | MS.gene023557:CDS | 25.0% |
| ! | TGAAGAGGTTGTTTATTTAT+TGG | - | chr4.3:14467310-14467329 | MS.gene023557:CDS | 25.0% |
| ! | TGTGTGAACAATTCTTAAAA+CGG | + | chr4.3:14467370-14467389 | None:intergenic | 25.0% |
| ! | TTAATTTCTACTTTGCTGAA+GGG | - | chr4.3:14466001-14466020 | MS.gene023557:intron | 25.0% |
| ! | TTCTCAAATGATGAAAAGAT+AGG | + | chr4.3:14465849-14465868 | None:intergenic | 25.0% |
| !! | AATGTATGTAAGTTCAAGTT+TGG | - | chr4.3:14466888-14466907 | MS.gene023557:intron | 25.0% |
| !! | AGAAAATTGGTAATCAGAAA+AGG | + | chr4.3:14467868-14467887 | None:intergenic | 25.0% |
| !! | ATACTGTTGTTAGTTTCAAA+AGG | + | chr4.3:14465882-14465901 | None:intergenic | 25.0% |
| !! | CTTTTTCTGTGTCTTTTAAA+AGG | + | chr4.3:14467464-14467483 | None:intergenic | 25.0% |
| !! | GTTTAAAATTAAGTGAGCTA+GGG | + | chr4.3:14467431-14467450 | None:intergenic | 25.0% |
| !! | TTTAATTTCTACTTTGCTGA+AGG | - | chr4.3:14466000-14466019 | MS.gene023557:intron | 25.0% |
| !!! | ATATCCTTTTGAATGGATTA+AGG | + | chr4.3:14464812-14464831 | None:intergenic | 25.0% |
| !!! | GAATACTTTTGAAACATCAA+TGG | + | chr4.3:14465415-14465434 | None:intergenic | 25.0% |
| !!! | GATCTAAGTGTAATTTGTTA+AGG | + | chr4.3:14467198-14467217 | None:intergenic | 25.0% |
| !!! | GTTATGGAATGCATTTTTTA+TGG | - | chr4.3:14464880-14464899 | MS.gene023557:intron | 25.0% |
| !!! | TATCCTTTTGAATGGATTAA+GGG | + | chr4.3:14464811-14464830 | None:intergenic | 25.0% |
| !!! | TGCATTTTTTATGGTGTTAA+CGG | - | chr4.3:14464889-14464908 | MS.gene023557:intron | 25.0% |
| !!! | TGTGTTGATAATTTCAATGT+GGG | - | chr4.3:14464371-14464390 | MS.gene023557:intron | 25.0% |
| !!! | TTGTGTTGATAATTTCAATG+TGG | - | chr4.3:14464370-14464389 | MS.gene023557:intron | 25.0% |
| !!! | TTTTGTTTTGAATTCAGGTT+AGG | - | chr4.3:14464178-14464197 | MS.gene023557:CDS | 25.0% |
| AAACTCCACAAAAATGAAAC+AGG | + | chr4.3:14465788-14465807 | None:intergenic | 30.0% | |
| AAATGTTAACTTATGCCCTT+GGG | - | chr4.3:14465458-14465477 | MS.gene023557:intron | 30.0% | |
| AACACAATGTAATTGTAGGA+TGG | + | chr4.3:14464770-14464789 | None:intergenic | 30.0% | |
| AACTAAATATGCCATCTCTT+GGG | + | chr4.3:14467645-14467664 | None:intergenic | 30.0% | |
| AACTCCACAAAAATGAAACA+GGG | + | chr4.3:14465787-14465806 | None:intergenic | 30.0% | |
| AATCCGGTGTAAAATTTGAA+GGG | + | chr4.3:14468166-14468185 | None:intergenic | 30.0% | |
| ACAACATCTGGAAAAAAAGA+AGG | + | chr4.3:14464292-14464311 | None:intergenic | 30.0% | |
| ACAAGTTAAGGAGCTTAAAA+TGG | + | chr4.3:14465592-14465611 | None:intergenic | 30.0% | |
| ACACAATGTAATTGTAGGAT+GGG | + | chr4.3:14464769-14464788 | None:intergenic | 30.0% | |
| ACTTGAGTTTGAATTGAACT+AGG | + | chr4.3:14466601-14466620 | None:intergenic | 30.0% | |
| ATACAACTATAGCACAAGAA+AGG | + | chr4.3:14466373-14466392 | None:intergenic | 30.0% | |
| ATCTCCGATTAGAAGAAAAT+TGG | + | chr4.3:14467881-14467900 | None:intergenic | 30.0% | |
| CAGAAATTGGAGAAAAGTTA+TGG | - | chr4.3:14468361-14468380 | MS.gene023557:CDS | 30.0% | |
| CATACCTTGATCATATCAAT+AGG | + | chr4.3:14464071-14464090 | None:intergenic | 30.0% | |
| CTTAATTTCATGGTCCAATT+TGG | - | chr4.3:14466644-14466663 | MS.gene023557:intron | 30.0% | |
| CTTGACAAATAAAGCAATTG+AGG | - | chr4.3:14464948-14464967 | MS.gene023557:intron | 30.0% | |
| GCATAAGTTAAAAAGGCTAA+AGG | - | chr4.3:14465481-14465500 | MS.gene023557:intron | 30.0% | |
| GTATTGTCAAACTTGACATT+AGG | + | chr4.3:14466991-14467010 | None:intergenic | 30.0% | |
| GTATTTACTAGCTAATTGGT+GGG | - | chr4.3:14466271-14466290 | MS.gene023557:intron | 30.0% | |
| TAACTAAATATGCCATCTCT+TGG | + | chr4.3:14467646-14467665 | None:intergenic | 30.0% | |
| TAGCTAGAAAAACATACCAA+AGG | + | chr4.3:14468258-14468277 | None:intergenic | 30.0% | |
| TCAACCTATTGATATGATCA+AGG | - | chr4.3:14464064-14464083 | MS.gene023557:intron | 30.0% | |
| TGAGTCTTCACATAATCAAA+TGG | + | chr4.3:14468055-14468074 | None:intergenic | 30.0% | |
| TGCATTCCAATTTGTGATTA+TGG | - | chr4.3:14467752-14467771 | MS.gene023557:intron | 30.0% | |
| TGTATTTACTAGCTAATTGG+TGG | - | chr4.3:14466270-14466289 | MS.gene023557:intron | 30.0% | |
| TTAACGGTTGTCTTACTTAT+TGG | - | chr4.3:14464905-14464924 | MS.gene023557:intron | 30.0% | |
| TTCTAGTCTAAGTCATGTAA+GGG | - | chr4.3:14467836-14467855 | MS.gene023557:intron | 30.0% | |
| ! | ATCAAAATTGGATCTGGAAT+TGG | - | chr4.3:14464680-14464699 | MS.gene023557:intron | 30.0% |
| ! | ATCAATAGGTTGAATAACAC+AGG | + | chr4.3:14464057-14464076 | None:intergenic | 30.0% |
| ! | CACAAACCCCTTTTTATAAA+GGG | - | chr4.3:14465435-14465454 | MS.gene023557:intron | 30.0% |
| ! | CATAACTTTTCTCCAATTTC+TGG | + | chr4.3:14468363-14468382 | None:intergenic | 30.0% |
| ! | GGTTTAAAATTAAGTGAGCT+AGG | + | chr4.3:14467432-14467451 | None:intergenic | 30.0% |
| ! | TTGACACTTGCTAAAAGATT+TGG | + | chr4.3:14465358-14465377 | None:intergenic | 30.0% |
| ! | TTTCTAGTCTAAGTCATGTA+AGG | - | chr4.3:14467835-14467854 | MS.gene023557:intron | 30.0% |
| ! | TTTTATCTACTGTGGTGTAA+AGG | + | chr4.3:14466179-14466198 | None:intergenic | 30.0% |
| !! | CGATTGCTACAATTTAGTTT+TGG | - | chr4.3:14467252-14467271 | MS.gene023557:CDS | 30.0% |
| !! | GCTCTGAAAGAAATTACAAA+AGG | + | chr4.3:14464710-14464729 | None:intergenic | 30.0% |
| !! | GTTCTTTGAAATAGTGAATC+TGG | - | chr4.3:14467566-14467585 | MS.gene023557:intron | 30.0% |
| !! | TGAGTCATTGTATTTGGTTT+TGG | - | chr4.3:14464504-14464523 | MS.gene023557:intron | 30.0% |
| !! | TTTTAGATCTGTGAGTTGAA+GGG | - | chr4.3:14464443-14464462 | MS.gene023557:intron | 30.0% |
| !!! | ATACGAGTCTAGTTTTGAAA+AGG | + | chr4.3:14466316-14466335 | None:intergenic | 30.0% |
| !!! | TACGAGTCTAGTTTTGAAAA+GGG | + | chr4.3:14466315-14466334 | None:intergenic | 30.0% |
| AAACAAAAACATGTGGCAAC+AGG | + | chr4.3:14467673-14467692 | None:intergenic | 35.0% | |
| AAACAGCAAAGAAACAGAAC+AGG | + | chr4.3:14465750-14465769 | None:intergenic | 35.0% | |
| AAGAGAATAGTACCATGACA+TGG | + | chr4.3:14468216-14468235 | None:intergenic | 35.0% | |
| AATGTTAACTTATGCCCTTG+GGG | - | chr4.3:14465459-14465478 | MS.gene023557:intron | 35.0% | |
| AATTGTAGCAATCGCACTAT+AGG | + | chr4.3:14467246-14467265 | None:intergenic | 35.0% | |
| ACGAAGATGAAGGTTATATC+TGG | - | chr4.3:14467034-14467053 | MS.gene023557:intron | 35.0% | |
| ACTAGACTCGTATAGATCAA+AGG | - | chr4.3:14466323-14466342 | MS.gene023557:intron | 35.0% | |
| ACTGTGGTGTAAAGGAAATA+GGG | + | chr4.3:14466171-14466190 | None:intergenic | 35.0% | |
| AGAAGAGATTCAGTAGCAAA+TGG | + | chr4.3:14467984-14468003 | None:intergenic | 35.0% | |
| AGAGAATAGTACCATGACAT+GGG | + | chr4.3:14468215-14468234 | None:intergenic | 35.0% | |
| AGTTCAAGACACATATTGCA+AGG | + | chr4.3:14467706-14467725 | None:intergenic | 35.0% | |
| AGTTTGAATTGAACTAGGTC+TGG | + | chr4.3:14466596-14466615 | None:intergenic | 35.0% | |
| ATGAATAAAGGGGAAACTAG+GGG | + | chr4.3:14466203-14466222 | None:intergenic | 35.0% | |
| ATGCAAAGGACTAATGACAA+AGG | + | chr4.3:14464858-14464877 | None:intergenic | 35.0% | |
| CAACTTACAGCAACAAAACA+AGG | + | chr4.3:14467492-14467511 | None:intergenic | 35.0% | |
| CCTTTATAAAAAGGGGTTTG+TGG | + | chr4.3:14465437-14465456 | None:intergenic | 35.0% | |
| CGGAGATATGATATTCCATT+TGG | - | chr4.3:14467894-14467913 | MS.gene023557:intron | 35.0% | |
| CTAAATCCATACCTCAACAA+AGG | + | chr4.3:14464537-14464556 | None:intergenic | 35.0% | |
| CTCATTGAGTTTCAAAAGTC+GGG | + | chr4.3:14466684-14466703 | None:intergenic | 35.0% | |
| GAAATGTTAACTTATGCCCT+TGG | - | chr4.3:14465457-14465476 | MS.gene023557:intron | 35.0% | |
| GAACATAGTACCATTGACAT+TGG | + | chr4.3:14467604-14467623 | None:intergenic | 35.0% | |
| GAATCCGGTGTAAAATTTGA+AGG | + | chr4.3:14468167-14468186 | None:intergenic | 35.0% | |
| GATGAATAAAGGGGAAACTA+GGG | + | chr4.3:14466204-14466223 | None:intergenic | 35.0% | |
| GCTCATTGAGTTTCAAAAGT+CGG | + | chr4.3:14466685-14466704 | None:intergenic | 35.0% | |
| GTTCAAGACACATATTGCAA+GGG | + | chr4.3:14467705-14467724 | None:intergenic | 35.0% | |
| TAAGAGATACACGAAGATGA+AGG | - | chr4.3:14467024-14467043 | MS.gene023557:intron | 35.0% | |
| TACTGTGGTGTAAAGGAAAT+AGG | + | chr4.3:14466172-14466191 | None:intergenic | 35.0% | |
| TAGGGCCATCAATGTTTATT+AGG | + | chr4.3:14467413-14467432 | None:intergenic | 35.0% | |
| TCATTGAGTTTCAAAAGTCG+GGG | + | chr4.3:14466683-14466702 | None:intergenic | 35.0% | |
| TCTACCAAAAAGCTCTATGT+GGG | - | chr4.3:14464995-14465014 | MS.gene023557:intron | 35.0% | |
| TCTACCATGCTTAAGAATGA+GGG | - | chr4.3:14464237-14464256 | MS.gene023557:CDS | 35.0% | |
| TGATGAATAAAGGGGAAACT+AGG | + | chr4.3:14466205-14466224 | None:intergenic | 35.0% | |
| TGCTACTGAATCTCTTCTTT+AGG | - | chr4.3:14467986-14468005 | MS.gene023557:intron | 35.0% | |
| TTCACACATCAAAAGTGAAC+TGG | - | chr4.3:14467382-14467401 | MS.gene023557:CDS | 35.0% | |
| TTCTACCATGCTTAAGAATG+AGG | - | chr4.3:14464236-14464255 | MS.gene023557:CDS | 35.0% | |
| TTGTCATTAGTCCTTTGCAT+TGG | - | chr4.3:14464858-14464877 | MS.gene023557:intron | 35.0% | |
| TTGTTGAGGTATGGATTTAG+TGG | - | chr4.3:14464537-14464556 | MS.gene023557:intron | 35.0% | |
| ! | AATTCAGGTTAGGATTCAAC+TGG | - | chr4.3:14464188-14464207 | MS.gene023557:CDS | 35.0% |
| ! | ATTCAGGTTAGGATTCAACT+GGG | - | chr4.3:14464189-14464208 | MS.gene023557:CDS | 35.0% |
| ! | ATTGAGTCTTTTATGCTCAG+TGG | - | chr4.3:14466718-14466737 | MS.gene023557:intron | 35.0% |
| ! | CCACAAACCCCTTTTTATAA+AGG | - | chr4.3:14465434-14465453 | MS.gene023557:intron | 35.0% |
| ! | GGAGAAAAGTTATGGGTTAT+AGG | - | chr4.3:14468369-14468388 | MS.gene023557:CDS | 35.0% |
| ! | TTGAGTCTTTTATGCTCAGT+GGG | - | chr4.3:14466719-14466738 | MS.gene023557:intron | 35.0% |
| ! | TTTAGATCTGTGAGTTGAAG+GGG | - | chr4.3:14464444-14464463 | MS.gene023557:intron | 35.0% |
| ! | TTTGACTGCTTTGTTCTTAG+TGG | - | chr4.3:14464340-14464359 | MS.gene023557:intron | 35.0% |
| !! | AATGCCCTGTTTCATTTTTG+TGG | - | chr4.3:14465780-14465799 | MS.gene023557:intron | 35.0% |
| !! | AGTGAATCTGGTTCTTTATC+TGG | - | chr4.3:14467578-14467597 | MS.gene023557:intron | 35.0% |
| !! | CTTTTAGATCTGTGAGTTGA+AGG | - | chr4.3:14464442-14464461 | MS.gene023557:intron | 35.0% |
| !! | GCATTTCTTTCTAGTTGGAT+AGG | - | chr4.3:14467168-14467187 | MS.gene023557:CDS | 35.0% |
| !! | GTTCTGTTTCTTTGCTGTTT+AGG | - | chr4.3:14465750-14465769 | MS.gene023557:intron | 35.0% |
| !! | TCAAAGTGTTGAGTTCTTCA+AGG | - | chr4.3:14465248-14465267 | MS.gene023557:intron | 35.0% |
| !! | TTAGTCCTTTGCATTGGTTA+TGG | - | chr4.3:14464864-14464883 | MS.gene023557:intron | 35.0% |
| !!! | ACGAGTCTAGTTTTGAAAAG+GGG | + | chr4.3:14466314-14466333 | None:intergenic | 35.0% |
| !!! | CTTGTTTTGTTGCTGTAAGT+TGG | - | chr4.3:14467490-14467509 | MS.gene023557:intron | 35.0% |
| !!! | CTTTTTAACTTATGCCCCAA+GGG | + | chr4.3:14465476-14465495 | None:intergenic | 35.0% |
| AAAGCAATTGAGGCCAATGA+TGG | - | chr4.3:14464958-14464977 | MS.gene023557:intron | 40.0% | |
| AACACCCTCATTCTTAAGCA+TGG | + | chr4.3:14464244-14464263 | None:intergenic | 40.0% | |
| AAGCTGAATCACTTCTTGCA+GGG | - | chr4.3:14464565-14464584 | MS.gene023557:intron | 40.0% | |
| AGTCATTTCACCTAGACCAA+CGG | + | chr4.3:14465277-14465296 | None:intergenic | 40.0% | |
| ATGAAGGGATTCTTTCACTG+TGG | - | chr4.3:14465160-14465179 | MS.gene023557:intron | 40.0% | |
| CAACTCACAGATCTAAAAGC+AGG | + | chr4.3:14464441-14464460 | None:intergenic | 40.0% | |
| CAACTCACCTAAATGTTCCA+AGG | + | chr4.3:14464636-14464655 | None:intergenic | 40.0% | |
| CAGCCCTTAATCCATTCAAA+AGG | - | chr4.3:14464805-14464824 | MS.gene023557:intron | 40.0% | |
| CCTTGGGGCATAAGTTAAAA+AGG | - | chr4.3:14465474-14465493 | MS.gene023557:intron | 40.0% | |
| CTCTACCAAAAAGCTCTATG+TGG | - | chr4.3:14464994-14465013 | MS.gene023557:intron | 40.0% | |
| CTTCATCCTTTGTTGAGGTA+TGG | - | chr4.3:14464528-14464547 | MS.gene023557:intron | 40.0% | |
| CTTTATCTGGCCAATGTCAA+TGG | - | chr4.3:14467591-14467610 | MS.gene023557:intron | 40.0% | |
| GAGAATAGTACCATGACATG+GGG | + | chr4.3:14468214-14468233 | None:intergenic | 40.0% | |
| GAGGGAAAATATCCATACAC+CGG | - | chr4.3:14468100-14468119 | MS.gene023557:CDS | 40.0% | |
| GATACTATCTTGAGTAGGGT+TGG | - | chr4.3:14466550-14466569 | MS.gene023557:intron | 40.0% | |
| GCATTCCATAACCAATGCAA+AGG | + | chr4.3:14464872-14464891 | None:intergenic | 40.0% | |
| TAACTCAGTGAACTGTGAAG+AGG | - | chr4.3:14467295-14467314 | MS.gene023557:CDS | 40.0% | |
| TAAGCTGAATCACTTCTTGC+AGG | - | chr4.3:14464564-14464583 | MS.gene023557:intron | 40.0% | |
| TAGGGAGGAAGATTAGATGA+TGG | + | chr4.3:14466153-14466172 | None:intergenic | 40.0% | |
| TATGGTACAATCGGTAGTCT+TGG | - | chr4.3:14467770-14467789 | MS.gene023557:intron | 40.0% | |
| TCTAGGTGAAATGACTACTG+TGG | - | chr4.3:14465281-14465300 | MS.gene023557:intron | 40.0% | |
| TGTCAAACTTGACATTAGGG+CGG | + | chr4.3:14466987-14467006 | None:intergenic | 40.0% | |
| TTAGGTGCAAGTAGTGTATC+TGG | - | chr4.3:14468004-14468023 | MS.gene023557:intron | 40.0% | |
| TTGGACTTCATCCTTTGTTG+AGG | - | chr4.3:14464523-14464542 | MS.gene023557:intron | 40.0% | |
| ! | ACTGGGCATTTCTTTCTAGT+TGG | - | chr4.3:14467163-14467182 | MS.gene023557:CDS | 40.0% |
| ! | ATGCTTAAGAATGAGGGTGT+TGG | - | chr4.3:14464243-14464262 | MS.gene023557:CDS | 40.0% |
| ! | CTAGGGGATTTTATCTACTG+TGG | + | chr4.3:14466187-14466206 | None:intergenic | 40.0% |
| ! | CTTTCTGTACTGAGTTGAGT+AGG | - | chr4.3:14466936-14466955 | MS.gene023557:intron | 40.0% |
| ! | GGACCCTTCAAATTTTACAC+CGG | - | chr4.3:14468160-14468179 | MS.gene023557:intron | 40.0% |
| !! | AGAAGCATCACTGTTATTCG+AGG | - | chr4.3:14466843-14466862 | MS.gene023557:intron | 40.0% |
| !! | CATAGAGCTTTTTGGTAGAG+TGG | + | chr4.3:14464994-14465013 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr4.3:14465616-14465635 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr4.3:14465617-14465636 | None:intergenic | 40.0% |
| !! | TCTTTTAAAAGGCTGACGCA+TGG | + | chr4.3:14467453-14467472 | None:intergenic | 40.0% |
| !!! | CCTTTTTAACTTATGCCCCA+AGG | + | chr4.3:14465477-14465496 | None:intergenic | 40.0% |
| !!! | TTTTCTCCAATTTCTGGAGC+TGG | + | chr4.3:14468357-14468376 | None:intergenic | 40.0% |
| AAACTACACAAACGCCTTCC+AGG | - | chr4.3:14465116-14465135 | MS.gene023557:intron | 45.0% | |
| AAAGATGCAACCTGATGCTG+AGG | - | chr4.3:14468081-14468100 | MS.gene023557:CDS | 45.0% | |
| AAGATGCAACCTGATGCTGA+GGG | - | chr4.3:14468082-14468101 | MS.gene023557:CDS | 45.0% | |
| ACCATCAAGCCTTTCGTCAA+TGG | - | chr4.3:14464008-14464027 | MS.gene023557:intron | 45.0% | |
| ACCATTGACGAAAGGCTTGA+TGG | + | chr4.3:14464012-14464031 | None:intergenic | 45.0% | |
| ACTGCTTATGGCAGATGACA+TGG | - | chr4.3:14468320-14468339 | MS.gene023557:CDS | 45.0% | |
| ACTTTGCTGAAGGGATTGAG+TGG | - | chr4.3:14466010-14466029 | MS.gene023557:intron | 45.0% | |
| AGCATCACTGTTATTCGAGG+CGG | - | chr4.3:14466846-14466865 | MS.gene023557:intron | 45.0% | |
| ATCAAGCCTTTCGTCAATGG+TGG | - | chr4.3:14464011-14464030 | MS.gene023557:intron | 45.0% | |
| CAATCCTGACACAGTAGACA+GGG | + | chr4.3:14468189-14468208 | None:intergenic | 45.0% | |
| CTTTATGCACACCCAAGAGA+TGG | - | chr4.3:14467631-14467650 | MS.gene023557:intron | 45.0% | |
| GAATTGAACTAGGTCTGGCT+TGG | + | chr4.3:14466591-14466610 | None:intergenic | 45.0% | |
| GAGTTCTTCAAGGATACCGT+TGG | - | chr4.3:14465258-14465277 | MS.gene023557:intron | 45.0% | |
| GCTGTCAAGACCTTCAAATC+TGG | - | chr4.3:14468136-14468155 | MS.gene023557:CDS | 45.0% | |
| GGGATTCTTTCACTGTGGAA+AGG | - | chr4.3:14465165-14465184 | MS.gene023557:intron | 45.0% | |
| GGTGAAATGACTACTGTGGT+TGG | - | chr4.3:14465285-14465304 | MS.gene023557:intron | 45.0% | |
| GTCAAGACCTTCAAATCTGG+AGG | - | chr4.3:14468139-14468158 | MS.gene023557:intron | 45.0% | |
| GTGGTGTAAAGGAAATAGGG+AGG | + | chr4.3:14466168-14466187 | None:intergenic | 45.0% | |
| GTTAGGATTCAACTGGGTCA+AGG | - | chr4.3:14464195-14464214 | MS.gene023557:CDS | 45.0% | |
| TTCCAGGCACTTTACCGTAT+CGG | - | chr4.3:14465132-14465151 | MS.gene023557:intron | 45.0% | |
| TTTGGCACTCATTCGTATGC+AGG | - | chr4.3:14465062-14465081 | MS.gene023557:intron | 45.0% | |
| ! | AAGAGCCATGGCATTGAACA+TGG | - | chr4.3:14465206-14465225 | MS.gene023557:intron | 45.0% |
| ! | AGAGCCATGGCATTGAACAT+GGG | - | chr4.3:14465207-14465226 | MS.gene023557:intron | 45.0% |
| ! | GGATATTTTCCCTCAGCATC+AGG | + | chr4.3:14468094-14468113 | None:intergenic | 45.0% |
| ! | TCAGCCCACATAGAGCTTTT+TGG | + | chr4.3:14465002-14465021 | None:intergenic | 45.0% |
| ! | TTCAAGGATACCGTTGGTCT+AGG | - | chr4.3:14465264-14465283 | MS.gene023557:intron | 45.0% |
| ! | TTGACGAAAGGCTTGATGGT+TGG | + | chr4.3:14464008-14464027 | None:intergenic | 45.0% |
| !! | AGCTTTTTGGTAGAGTGGCA+GGG | + | chr4.3:14464989-14465008 | None:intergenic | 45.0% |
| !! | AGTTGGTAGTCCAGCTGATT+TGG | - | chr4.3:14465044-14465063 | MS.gene023557:intron | 45.0% |
| !! | CTCCTTAACTTGTGCCCTAA+GGG | - | chr4.3:14465599-14465618 | MS.gene023557:intron | 45.0% |
| !! | GGAAGGCGTTTGTGTAGTTT+CGG | + | chr4.3:14465116-14465135 | None:intergenic | 45.0% |
| !! | GGGTGTTGGTGCTTTCTATA+AGG | - | chr4.3:14464257-14464276 | MS.gene023557:CDS | 45.0% |
| !! | TCACTCTCTAGCTAGCTTTC+TGG | - | chr4.3:14466239-14466258 | MS.gene023557:intron | 45.0% |
| !! | TTTCACTGTGGAAAGGTGCT+GGG | - | chr4.3:14465172-14465191 | MS.gene023557:intron | 45.0% |
| !!! | TAATTTATTCTTTTATAAAA+GGG | + | chr4.3:14465640-14465659 | None:intergenic | 5.0% |
| AAACCAGCAGCAACAGGCTT+AGG | + | chr4.3:14463981-14464000 | None:intergenic | 50.0% | |
| AAATGTTCCAAGGCGTGCAG+TGG | + | chr4.3:14464626-14464645 | None:intergenic | 50.0% | |
| AGTTGAGTAGGCACAGGAGT+TGG | - | chr4.3:14466948-14466967 | MS.gene023557:intron | 50.0% | |
| CATCCCCATGTTCAATGCCA+TGG | + | chr4.3:14465214-14465233 | None:intergenic | 50.0% | |
| CCTCAACCAGCTCCAGAAAT+TGG | - | chr4.3:14468348-14468367 | MS.gene023557:CDS | 50.0% | |
| CGAATGAGTGCCAAATCAGC+TGG | + | chr4.3:14465057-14465076 | None:intergenic | 50.0% | |
| CTGCACGCCTTGGAACATTT+AGG | - | chr4.3:14464626-14464645 | MS.gene023557:intron | 50.0% | |
| GAAGGGTCCTCCAGATTTGA+AGG | + | chr4.3:14468149-14468168 | None:intergenic | 50.0% | |
| GACACAGTAGACAGGGAATC+CGG | + | chr4.3:14468182-14468201 | None:intergenic | 50.0% | |
| GATTCCCTGTCTACTGTGTC+AGG | - | chr4.3:14468182-14468201 | MS.gene023557:intron | 50.0% | |
| GCAATCCTGACACAGTAGAC+AGG | + | chr4.3:14468190-14468209 | None:intergenic | 50.0% | |
| GCCATGGCTCTTACTACAGT+AGG | + | chr4.3:14465198-14465217 | None:intergenic | 50.0% | |
| GCCTACTGTAGTAAGAGCCA+TGG | - | chr4.3:14465194-14465213 | MS.gene023557:intron | 50.0% | |
| GGTGCAATTGGAGCAACAGT+TGG | - | chr4.3:14465027-14465046 | MS.gene023557:intron | 50.0% | |
| GTCTATCAGCTGGGTTACTC+AGG | - | chr4.3:14464587-14464606 | MS.gene023557:intron | 50.0% | |
| TCTTGCAGGGTCTATCAGCT+GGG | - | chr4.3:14464578-14464597 | MS.gene023557:intron | 50.0% | |
| TGCCCTTAGGGCACAAGTTA+AGG | + | chr4.3:14465604-14465623 | None:intergenic | 50.0% | |
| TTCTTGCAGGGTCTATCAGC+TGG | - | chr4.3:14464577-14464596 | MS.gene023557:intron | 50.0% | |
| ! | ACCGTATCGGTGCAGATGAA+GGG | - | chr4.3:14465145-14465164 | MS.gene023557:intron | 50.0% |
| ! | CTTTCACTGTGGAAAGGTGC+TGG | - | chr4.3:14465171-14465190 | MS.gene023557:intron | 50.0% |
| ! | GAAGCACCACCATTGACGAA+AGG | + | chr4.3:14464020-14464039 | None:intergenic | 50.0% |
| ! | GAGCCATGGCATTGAACATG+GGG | - | chr4.3:14465208-14465227 | MS.gene023557:intron | 50.0% |
| ! | GATACGGTAAAGTGCCTGGA+AGG | + | chr4.3:14465133-14465152 | None:intergenic | 50.0% |
| ! | GTACTGAGTTGAGTAGGCAC+AGG | - | chr4.3:14466942-14466961 | MS.gene023557:intron | 50.0% |
| ! | TACCGTATCGGTGCAGATGA+AGG | - | chr4.3:14465144-14465163 | MS.gene023557:intron | 50.0% |
| ! | TCCCTTCATCTGCACCGATA+CGG | + | chr4.3:14465149-14465168 | None:intergenic | 50.0% |
| ! | TTCGTCAATGGTGGTGCTTC+TGG | - | chr4.3:14464020-14464039 | MS.gene023557:intron | 50.0% |
| !! | CCAATTTCTGGAGCTGGTTG+AGG | + | chr4.3:14468351-14468370 | None:intergenic | 50.0% |
| !! | GAGCTTTTTGGTAGAGTGGC+AGG | + | chr4.3:14464990-14465009 | None:intergenic | 50.0% |
| !! | GCTCCTTAACTTGTGCCCTA+AGG | - | chr4.3:14465598-14465617 | MS.gene023557:intron | 50.0% |
| !! | GCTTTTTGGTAGAGTGGCAG+GGG | + | chr4.3:14464988-14465007 | None:intergenic | 50.0% |
| AAGCCTAAGCCTGTTGCTGC+TGG | - | chr4.3:14463975-14463994 | MS.gene023557:CDS | 55.0% | |
| ACTTACACCACTGCACGCCT+TGG | - | chr4.3:14464616-14464635 | MS.gene023557:intron | 55.0% | |
| ATCAGCTGGGTTACTCAGGC+AGG | - | chr4.3:14464591-14464610 | MS.gene023557:intron | 55.0% | |
| CAGGATTGCTCCCCATGTCA+TGG | - | chr4.3:14468201-14468220 | MS.gene023557:intron | 55.0% | |
| CAGTCAAGAGAGCCGGTGTA+TGG | + | chr4.3:14468115-14468134 | None:intergenic | 55.0% | |
| GACAGCACAGTCAAGAGAGC+CGG | + | chr4.3:14468122-14468141 | None:intergenic | 55.0% | |
| ! | CACCGATACGGTAAAGTGCC+TGG | + | chr4.3:14465137-14465156 | None:intergenic | 55.0% |
| ! | TAGTTTCGGCGCTGAGCAAG+AGG | + | chr4.3:14465102-14465121 | None:intergenic | 55.0% |
| !! | AGCCTGTTGCTGCTGGTTTC+TGG | - | chr4.3:14463982-14464001 | MS.gene023557:CDS | 55.0% |
| GGCCAGAAACCAGCAGCAAC+AGG | + | chr4.3:14463987-14464006 | None:intergenic | 60.0% | |
| GGGCTGACTGCTGGTGCAAT+TGG | - | chr4.3:14465015-14465034 | MS.gene023557:intron | 60.0% | |
| TGGCAGGGGCTTGCCATCAT+TGG | + | chr4.3:14464974-14464993 | None:intergenic | 60.0% | |
| ! | GCTCTATGTGGGCTGACTGC+TGG | - | chr4.3:14465006-14465025 | MS.gene023557:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 14463960 | 14468390 | 14463960 | ID=MS.gene023557 |
| chr4.3 | mRNA | 14463960 | 14468390 | 14463960 | ID=MS.gene023557.t1;Parent=MS.gene023557 |
| chr4.3 | exon | 14468265 | 14468390 | 14468265 | ID=MS.gene023557.t1.exon1;Parent=MS.gene023557.t1 |
| chr4.3 | CDS | 14468265 | 14468390 | 14468265 | ID=cds.MS.gene023557.t1;Parent=MS.gene023557.t1 |
| chr4.3 | exon | 14468072 | 14468155 | 14468072 | ID=MS.gene023557.t1.exon2;Parent=MS.gene023557.t1 |
| chr4.3 | CDS | 14468072 | 14468155 | 14468072 | ID=cds.MS.gene023557.t1;Parent=MS.gene023557.t1 |
| chr4.3 | exon | 14467703 | 14467764 | 14467703 | ID=MS.gene023557.t1.exon3;Parent=MS.gene023557.t1 |
| chr4.3 | CDS | 14467703 | 14467764 | 14467703 | ID=cds.MS.gene023557.t1;Parent=MS.gene023557.t1 |
| chr4.3 | exon | 14467044 | 14467405 | 14467044 | ID=MS.gene023557.t1.exon4;Parent=MS.gene023557.t1 |
| chr4.3 | CDS | 14467044 | 14467405 | 14467044 | ID=cds.MS.gene023557.t1;Parent=MS.gene023557.t1 |
| chr4.3 | exon | 14464128 | 14464342 | 14464128 | ID=MS.gene023557.t1.exon5;Parent=MS.gene023557.t1 |
| chr4.3 | CDS | 14464128 | 14464342 | 14464128 | ID=cds.MS.gene023557.t1;Parent=MS.gene023557.t1 |
| chr4.3 | exon | 14463960 | 14464016 | 14463960 | ID=MS.gene023557.t1.exon6;Parent=MS.gene023557.t1 |
| chr4.3 | CDS | 14463960 | 14464016 | 14463960 | ID=cds.MS.gene023557.t1;Parent=MS.gene023557.t1 |
| Gene Sequence |
| Protein sequence |
