Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56403.t1 | XP_003607905.1 | 97.4 | 549 | 12 | 1 | 1 | 549 | 1 | 547 | 2.0e-309 | 1070.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56403.t1 | Q88BD4 | 28.3 | 434 | 277 | 13 | 93 | 521 | 17 | 421 | 6.5e-38 | 160.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56403.t1 | G7JJZ2 | 97.4 | 549 | 12 | 1 | 1 | 549 | 1 | 547 | 1.5e-309 | 1070.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene56403 | -0.809202 | 2.13E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene56403 | -0.81339 | 2.62E-51 | -1.69E-46 |
| MS.gene050811 | MS.gene56403 | -0.83547 | 1.65E-56 | -1.69E-46 |
| MS.gene05081 | MS.gene56403 | 0.817538 | 3.13E-52 | -1.69E-46 |
| MS.gene051208 | MS.gene56403 | 0.814038 | 1.89E-51 | -1.69E-46 |
| MS.gene051244 | MS.gene56403 | 0.808539 | 2.95E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene56403 | 0.83587 | 1.30E-56 | -1.69E-46 |
| MS.gene051552 | MS.gene56403 | -0.833199 | 6.12E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene56403 | -0.804878 | 1.75E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene56403 | 0.817068 | 3.99E-52 | -1.69E-46 |
| MS.gene052589 | MS.gene56403 | 0.845956 | 2.94E-59 | -1.69E-46 |
| MS.gene053330 | MS.gene56403 | 0.863973 | 1.70E-64 | -1.69E-46 |
| MS.gene054102 | MS.gene56403 | 0.805255 | 1.46E-49 | -1.69E-46 |
| MS.gene054107 | MS.gene56403 | 0.815389 | 9.48E-52 | -1.69E-46 |
| MS.gene054110 | MS.gene56403 | 0.825086 | 5.68E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene56403 | 0.841529 | 4.50E-58 | -1.69E-46 |
| MS.gene054344 | MS.gene56403 | 0.824261 | 8.89E-54 | -1.69E-46 |
| MS.gene054719 | MS.gene56403 | 0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene56403 | -0.810601 | 1.06E-50 | -1.69E-46 |
| MS.gene055370 | MS.gene56403 | 0.840652 | 7.64E-58 | -1.69E-46 |
| MS.gene055488 | MS.gene56403 | -0.801962 | 7.03E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene56403 | 0.888005 | 8.66E-73 | -1.69E-46 |
| MS.gene056633 | MS.gene56403 | 0.872063 | 4.24E-67 | -1.69E-46 |
| MS.gene056877 | MS.gene56403 | 0.840474 | 8.51E-58 | -1.69E-46 |
| MS.gene057196 | MS.gene56403 | 0.847356 | 1.22E-59 | -1.69E-46 |
| MS.gene057332 | MS.gene56403 | 0.839843 | 1.24E-57 | -1.69E-46 |
| MS.gene058418 | MS.gene56403 | -0.817746 | 2.81E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene56403 | 0.8312 | 1.91E-55 | -1.69E-46 |
| MS.gene058746 | MS.gene56403 | 0.863925 | 1.76E-64 | -1.69E-46 |
| MS.gene059303 | MS.gene56403 | 0.820366 | 7.12E-53 | -1.69E-46 |
| MS.gene059512 | MS.gene56403 | 0.950378 | 1.86E-108 | -1.69E-46 |
| MS.gene059683 | MS.gene56403 | 0.803881 | 2.82E-49 | -1.69E-46 |
| MS.gene061231 | MS.gene56403 | 0.81727 | 3.60E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56403 | MS.gene54796 | PPI |
| MS.gene34039 | MS.gene56403 | PPI |
| MS.gene56403 | MS.gene49437 | PPI |
| MS.gene56403 | MS.gene005970 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56403.t1 | MTR_4g084270 | 97.450 | 549 | 12 | 1 | 1 | 549 | 1 | 547 | 0.0 | 1103 |
| MS.gene56403.t1 | MTR_1g094980 | 49.417 | 429 | 199 | 7 | 73 | 489 | 18 | 440 | 5.53e-133 | 398 |
| MS.gene56403.t1 | MTR_1g094980 | 45.674 | 497 | 241 | 11 | 15 | 489 | 23 | 512 | 6.23e-132 | 397 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56403.t1 | AT1G70820 | 74.773 | 551 | 128 | 5 | 1 | 549 | 1 | 542 | 0.0 | 850 |
| MS.gene56403.t1 | AT1G70820 | 74.773 | 551 | 128 | 5 | 1 | 549 | 1 | 542 | 0.0 | 850 |
| MS.gene56403.t1 | AT5G17530 | 47.797 | 454 | 214 | 7 | 75 | 512 | 20 | 466 | 2.22e-132 | 396 |
| MS.gene56403.t1 | AT5G17530 | 47.797 | 454 | 214 | 7 | 75 | 512 | 59 | 505 | 1.33e-131 | 395 |
| MS.gene56403.t1 | AT5G17530 | 47.797 | 454 | 214 | 7 | 75 | 512 | 59 | 505 | 1.33e-131 | 395 |
| MS.gene56403.t1 | AT5G17530 | 47.797 | 454 | 214 | 7 | 75 | 512 | 59 | 505 | 1.33e-131 | 395 |
| MS.gene56403.t1 | AT5G17530 | 47.797 | 454 | 214 | 7 | 75 | 512 | 59 | 505 | 1.33e-131 | 395 |
| MS.gene56403.t1 | AT5G17530 | 47.797 | 454 | 214 | 7 | 75 | 512 | 92 | 538 | 4.71e-131 | 395 |
| MS.gene56403.t1 | AT5G17530 | 47.722 | 461 | 216 | 8 | 70 | 512 | 85 | 538 | 6.96e-131 | 396 |
Find 128 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCACTTAAGGGATTTC+AGG | 0.200454 | 4.4:-28604828 | MS.gene56403:intron |
| TCTCCTTGATGATTTCTCTT+AGG | 0.241263 | 4.4:+28604876 | None:intergenic |
| GTACAGGAAGGGAGGCTTAA+AGG | 0.243975 | 4.4:-28602987 | MS.gene56403:intron |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4.4:+28603803 | None:intergenic |
| GATATCCTCTTGAGAATGTT+AGG | 0.280295 | 4.4:-28605347 | MS.gene56403:CDS |
| GAGGCAATATCAGAGAGTTT+TGG | 0.300966 | 4.4:-28605405 | MS.gene56403:CDS |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4.4:+28603648 | None:intergenic |
| TGGTTGTATGGTGTTTGATA+TGG | 0.318441 | 4.4:-28605250 | MS.gene56403:CDS |
| AATGGTTTAGAGAAGGAAAA+AGG | 0.330346 | 4.4:-28605369 | MS.gene56403:CDS |
| GCATTATGAAACTCCACTTA+AGG | 0.337071 | 4.4:-28604837 | MS.gene56403:CDS |
| TGCTTTAGCATTTCGAGGTT+CGG | 0.347623 | 4.4:+28603279 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4.4:-28603881 | MS.gene56403:CDS |
| CATTATGAAACTCCACTTAA+GGG | 0.365922 | 4.4:-28604836 | MS.gene56403:CDS |
| TGTCTATGATGCTTCAATAA+TGG | 0.374026 | 4.4:-28605178 | MS.gene56403:intron |
| CTTATTACAGATTTATTGAA+TGG | 0.379212 | 4.4:+28605579 | None:intergenic |
| TTCAAACCATTGCGTGTGTA+AGG | 0.384986 | 4.4:+28605052 | None:intergenic |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4.4:-28604046 | MS.gene56403:CDS |
| ATGAAGAATTGGACAAGATT+AGG | 0.394518 | 4.4:-28605512 | MS.gene56403:CDS |
| AGAAGATGAGAAACCAAGTT+TGG | 0.394739 | 4.4:+28605605 | None:intergenic |
| GTAATAAGTGTGAAATGTTA+TGG | 0.397911 | 4.4:-28605564 | MS.gene56403:CDS |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4.4:-28603557 | MS.gene56403:intron |
| TGTACGAGCATCGGTTACTA+TGG | 0.406310 | 4.4:+28603736 | None:intergenic |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4.4:-28602956 | MS.gene56403:CDS |
| TTTGGGGAGTGGGTTATCAA+TGG | 0.408829 | 4.4:-28605387 | MS.gene56403:CDS |
| GGTTGTATGGTGTTTGATAT+GGG | 0.413997 | 4.4:-28605249 | MS.gene56403:CDS |
| TACAGGAAGGGAGGCTTAAA+GGG | 0.417177 | 4.4:-28602986 | MS.gene56403:intron |
| CATGGCTGCCATTGTATTGA+AGG | 0.421469 | 4.4:-28603774 | MS.gene56403:CDS |
| TTGAGTGTTGCAGTGTTTGC+CGG | 0.424973 | 4.4:-28605285 | MS.gene56403:CDS |
| ATATCTTTGCAAACCAAACT+TGG | 0.425190 | 4.4:-28605618 | MS.gene56403:CDS |
| TCTTGCTCGTGCTGGTTGTA+TGG | 0.433556 | 4.4:-28605262 | MS.gene56403:CDS |
| TCGGGATTGGGAATGTGATT+AGG | 0.440559 | 4.4:+28603941 | None:intergenic |
| CAGAATGGTTCGGATGTTAG+AGG | 0.441225 | 4.4:-28605483 | MS.gene56403:CDS |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4.4:-28603995 | MS.gene56403:CDS |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4.4:+28603552 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4.4:+28603316 | None:intergenic |
| AGTAGTGGTGGATGAAGAAT+TGG | 0.460522 | 4.4:-28605523 | MS.gene56403:CDS |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4.4:+28603746 | None:intergenic |
| TGTTACTATCATTCTTTGCT+AGG | 0.462385 | 4.4:-28605648 | MS.gene56403:CDS |
| CAAACCTGAAATCCCTTAAG+TGG | 0.467227 | 4.4:+28604824 | None:intergenic |
| TTTGCCGGTCTTGCTCGTGC+TGG | 0.468617 | 4.4:-28605270 | MS.gene56403:CDS |
| GGACGCGACCCTCGAGTCAC+AGG | 0.474920 | 4.4:-28605315 | MS.gene56403:CDS |
| GTTGCATTGGAAGGCGAGAA+AGG | 0.478585 | 4.4:-28605459 | MS.gene56403:CDS |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4.4:-28603815 | MS.gene56403:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4.4:+28603956 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4.4:-28602955 | MS.gene56403:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4.4:-28603596 | MS.gene56403:CDS |
| CCTCGAAATGCTAAAGCAAA+AGG | 0.489207 | 4.4:-28603274 | MS.gene56403:CDS |
| CCTCCACGGCAGGAGGAGTA+AGG | 0.491033 | 4.4:+28605424 | None:intergenic |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4.4:-28603401 | MS.gene56403:CDS |
| TCTGATATTGCCTCCACGGC+AGG | 0.494254 | 4.4:+28605414 | None:intergenic |
| ACTAAGTTTATAACTGATAG+AGG | 0.494389 | 4.4:-28603701 | MS.gene56403:CDS |
| CTTATGAATCAGTAGAACTT+AGG | 0.496088 | 4.4:-28603315 | MS.gene56403:CDS |
| TAGGAGGCTTCAGAATGGTT+CGG | 0.500282 | 4.4:-28605493 | MS.gene56403:CDS |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4.4:-28602944 | MS.gene56403:CDS |
| GAGAATGTTAGGGTGTCTCT+TGG | 0.518716 | 4.4:-28605336 | MS.gene56403:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4.4:-28603370 | MS.gene56403:CDS |
| ATTGAAGCATCATAGACAAA+TGG | 0.520839 | 4.4:+28605183 | None:intergenic |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4.4:-28604058 | MS.gene56403:intron |
| TCGTAAATATGCAAATAGAT+TGG | 0.522642 | 4.4:-28604966 | MS.gene56403:CDS |
| ATATTGATGCTCAAATGTAC+AGG | 0.524473 | 4.4:-28602890 | None:intergenic |
| TGACAAACTCATTGCTCTCA+TGG | 0.524707 | 4.4:-28603792 | MS.gene56403:CDS |
| ATATAATGAAGGGGCCTACA+TGG | 0.525333 | 4.4:-28603425 | MS.gene56403:intron |
| TTTGAGCATCAATATGAGCC+GGG | 0.527926 | 4.4:+28602898 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4.4:-28602945 | MS.gene56403:CDS |
| ATTTGAGCATCAATATGAGC+CGG | 0.540769 | 4.4:+28602897 | None:intergenic |
| ATATCCTCTTGAGAATGTTA+GGG | 0.543188 | 4.4:-28605346 | MS.gene56403:CDS |
| ACAACCAGCACGAGCAAGAC+CGG | 0.545469 | 4.4:+28605266 | None:intergenic |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4.4:-28604052 | MS.gene56403:CDS |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4.4:+28603979 | None:intergenic |
| ATTGTATTGAAGGAAAATCC+AGG | 0.558299 | 4.4:-28603764 | MS.gene56403:CDS |
| CACCATTGTTTATACCGCGT+TGG | 0.558868 | 4.4:-28603674 | MS.gene56403:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4.4:+28603546 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4.4:-28603364 | MS.gene56403:CDS |
| CGACCTTACTCCTCCTGCCG+TGG | 0.566388 | 4.4:-28605427 | MS.gene56403:CDS |
| GGTTATCAATGGTTTAGAGA+AGG | 0.568136 | 4.4:-28605376 | MS.gene56403:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4.4:-28604010 | MS.gene56403:CDS |
| CATTTGCCTTACACACGCAA+TGG | 0.572460 | 4.4:-28605058 | MS.gene56403:CDS |
| GGATGTTAGAGGAGTTGCAT+TGG | 0.576031 | 4.4:-28605472 | MS.gene56403:CDS |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4.4:-28603829 | MS.gene56403:CDS |
| ATTTAGACCCTGTGACTCGA+GGG | 0.578792 | 4.4:+28605307 | None:intergenic |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.582640 | 4.4:-28603633 | MS.gene56403:CDS |
| CCTTACTCCTCCTGCCGTGG+AGG | 0.582653 | 4.4:-28605424 | MS.gene56403:CDS |
| GTTAGAGGAGTTGCATTGGA+AGG | 0.585950 | 4.4:-28605468 | MS.gene56403:CDS |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4.4:-28603971 | MS.gene56403:CDS |
| AGTGGAGTTTCATAATGCAA+AGG | 0.592830 | 4.4:+28604842 | None:intergenic |
| ATGTTGCTGTACAGGAAGGG+AGG | 0.593434 | 4.4:-28602995 | MS.gene56403:intron |
| AAGAATTGGACAAGATTAGG+AGG | 0.597154 | 4.4:-28605509 | MS.gene56403:CDS |
| GATATTGCCTCCACGGCAGG+AGG | 0.597822 | 4.4:+28605417 | None:intergenic |
| AAGATTAGGAGGCTTCAGAA+TGG | 0.602089 | 4.4:-28605498 | MS.gene56403:CDS |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4.4:-28603382 | MS.gene56403:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4.4:-28603385 | MS.gene56403:CDS |
| ACTCTCTGATATTGCCTCCA+CGG | 0.605057 | 4.4:+28605410 | None:intergenic |
| TCCCGAGGACAAAATTGCCA+TGG | 0.605099 | 4.4:-28603924 | MS.gene56403:CDS |
| GGAAGGGAGGCTTAAAGGGT+GGG | 0.606977 | 4.4:-28602982 | MS.gene56403:CDS |
| GACGCGACCCTCGAGTCACA+GGG | 0.611240 | 4.4:-28605314 | MS.gene56403:CDS |
| GATACCGATGTTGACAGAAG+CGG | 0.611913 | 4.4:-28603848 | MS.gene56403:CDS |
| AATTTAGACCCTGTGACTCG+AGG | 0.613432 | 4.4:+28605306 | None:intergenic |
| AATGTGCTCATGAAACAAGC+GGG | 0.613902 | 4.4:+28605213 | None:intergenic |
| AAATGCTAAAGCAAAAGGAT+CGG | 0.620165 | 4.4:-28603269 | MS.gene56403:CDS |
| GAAGCATCATAGACAAATGG+AGG | 0.622415 | 4.4:+28605186 | None:intergenic |
| TGCTAAAGCAAAAGGATCGG+AGG | 0.622933 | 4.4:-28603266 | MS.gene56403:CDS |
| GGAGTTCAGCTTAACAAGGA+GGG | 0.622995 | 4.4:-28603629 | MS.gene56403:CDS |
| CAATGTGCTCATGAAACAAG+CGG | 0.623267 | 4.4:+28605212 | None:intergenic |
| GACACCCTAACATTCTCAAG+AGG | 0.625174 | 4.4:+28605342 | None:intergenic |
| CGACATGCTTGTACGAGCAT+CGG | 0.627032 | 4.4:+28603727 | None:intergenic |
| AGGAAGGGAGGCTTAAAGGG+TGG | 0.627499 | 4.4:-28602983 | MS.gene56403:CDS |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4.4:-28603830 | MS.gene56403:CDS |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4.4:-28603369 | MS.gene56403:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4.4:-28604043 | MS.gene56403:CDS |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4.4:-28603650 | MS.gene56403:CDS |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4.4:-28603590 | MS.gene56403:CDS |
| TGCAAAGTATGATGAAGTAG+TGG | 0.641435 | 4.4:-28605538 | MS.gene56403:CDS |
| GCACCTAAGAGAAATCATCA+AGG | 0.645515 | 4.4:-28604879 | MS.gene56403:CDS |
| AACCAACGCGGTATAAACAA+TGG | 0.648208 | 4.4:+28603672 | None:intergenic |
| TTTAAGCAGAGTAGACACTC+TGG | 0.648407 | 4.4:+28604943 | None:intergenic |
| GGGTGGGAGTTAGACTCATG+TGG | 0.663424 | 4.4:-28602966 | MS.gene56403:CDS |
| GGGTGTCATTTGTATCAACA+AGG | 0.663565 | 4.4:+28602919 | None:intergenic |
| AGGAGTTCAGCTTAACAAGG+AGG | 0.668823 | 4.4:-28603630 | MS.gene56403:CDS |
| CGATGTTGACAGAAGCGGCG+TGG | 0.670101 | 4.4:-28603843 | MS.gene56403:CDS |
| TTGAGCATCAATATGAGCCG+GGG | 0.674597 | 4.4:+28602899 | None:intergenic |
| TAATGAAGGGGCCTACATGG+TGG | 0.680927 | 4.4:-28603422 | MS.gene56403:intron |
| TGTTGATACAAATGACACCC+CGG | 0.681662 | 4.4:-28602916 | MS.gene56403:CDS |
| AAAGTATGATGAAGTAGTGG+TGG | 0.692926 | 4.4:-28605535 | MS.gene56403:CDS |
| TAATCACATTCCCAATCCCG+AGG | 0.693986 | 4.4:-28603939 | MS.gene56403:CDS |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4.4:-28603698 | MS.gene56403:CDS |
| TGACATTTCGGTAACCAACG+CGG | 0.705467 | 4.4:+28603660 | None:intergenic |
| CACGCCGCTTCTGTCAACAT+CGG | 0.714678 | 4.4:+28603844 | None:intergenic |
| AACATTTCGAAACTACATCG+AGG | 0.755001 | 4.4:-28603236 | MS.gene56403:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATCTTAATATATTGAAT+AGG | + | chr4.4:28603884-28603903 | None:intergenic | 15.0% |
| !! | AGATCTTAATATATTGAATA+GGG | + | chr4.4:28603883-28603902 | None:intergenic | 15.0% |
| !! | ATTCAATATATTAAGATCTT+AGG | - | chr4.4:28603884-28603903 | MS.gene56403:CDS | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | - | chr4.4:28605167-28605186 | MS.gene56403:intron | 15.0% |
| !! | TTTCTGTATATATATAATGA+AGG | - | chr4.4:28605166-28605185 | MS.gene56403:intron | 15.0% |
| !!! | AAATTTTCAAAGAAAATAGA+GGG | + | chr4.4:28604491-28604510 | None:intergenic | 15.0% |
| !!! | TAAATTTTCAAAGAAAATAG+AGG | + | chr4.4:28604492-28604511 | None:intergenic | 15.0% |
| !! | CTTATTACAGATTTATTGAA+TGG | + | chr4.4:28603026-28603045 | None:intergenic | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | - | chr4.4:28605201-28605220 | MS.gene56403:CDS | 20.0% |
| !! | TACACGTATATAAAAAATTG+TGG | + | chr4.4:28605478-28605497 | None:intergenic | 20.0% |
| !! | TCTGTATATATATAATGAAG+GGG | - | chr4.4:28605168-28605187 | MS.gene56403:intron | 20.0% |
| !!! | ATTATGTATAGTACTTTTGA+AGG | + | chr4.4:28603470-28603489 | None:intergenic | 20.0% |
| ! | AATATATTGAATAGGGCATA+AGG | + | chr4.4:28603876-28603895 | None:intergenic | 25.0% |
| ! | AATTGCATTTAGACTTAGTT+TGG | + | chr4.4:28604412-28604431 | None:intergenic | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | - | chr4.4:28605575-28605594 | MS.gene56403:CDS | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | - | chr4.4:28604901-28604920 | MS.gene56403:CDS | 25.0% |
| ! | ACTAGTTAAACTGTTCAATT+CGG | + | chr4.4:28603942-28603961 | None:intergenic | 25.0% |
| ! | ATTTAGAAGATACCAAATAC+AGG | + | chr4.4:28603845-28603864 | None:intergenic | 25.0% |
| ! | GTAATAAGTGTGAAATGTTA+TGG | - | chr4.4:28603038-28603057 | MS.gene56403:intron | 25.0% |
| ! | GTTATTTATTCAACAGATGA+CGG | - | chr4.4:28603516-28603535 | MS.gene56403:intron | 25.0% |
| ! | TATTAAGATCTTAGGAACTA+CGG | - | chr4.4:28603892-28603911 | MS.gene56403:CDS | 25.0% |
| ! | TCGTAAATATGCAAATAGAT+TGG | - | chr4.4:28603636-28603655 | MS.gene56403:CDS | 25.0% |
| ! | TTAATTTAAACATGACCTAG+AGG | - | chr4.4:28604148-28604167 | MS.gene56403:intron | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | - | chr4.4:28605080-28605099 | MS.gene56403:intron | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | - | chr4.4:28605511-28605530 | MS.gene56403:CDS | 25.0% |
| !! | ATTTAGACTTAGTTTGGATT+AGG | + | chr4.4:28604406-28604425 | None:intergenic | 25.0% |
| !!! | TGAAATTTTTTACGAAGAGA+GGG | - | chr4.4:28603569-28603588 | MS.gene56403:CDS | 25.0% |
| !!! | TTGAAATTTTTTACGAAGAG+AGG | - | chr4.4:28603568-28603587 | MS.gene56403:CDS | 25.0% |
| AAAGCTAGTTGAAGTTTAGT+TGG | + | chr4.4:28605404-28605423 | None:intergenic | 30.0% | |
| AAATAACTGAACCGTAAACA+GGG | + | chr4.4:28604095-28604114 | None:intergenic | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | - | chr4.4:28605333-28605352 | MS.gene56403:CDS | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | - | chr4.4:28604787-28604806 | MS.gene56403:intron | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | - | chr4.4:28604904-28604923 | MS.gene56403:CDS | 30.0% | |
| AATGGTTTAGAGAAGGAAAA+AGG | - | chr4.4:28603233-28603252 | MS.gene56403:intron | 30.0% | |
| ATAATAGTGAATGCTGGAAA+CGG | - | chr4.4:28604550-28604569 | MS.gene56403:intron | 30.0% | |
| ATATCCTCTTGAGAATGTTA+GGG | - | chr4.4:28603256-28603275 | MS.gene56403:CDS | 30.0% | |
| ATATCTTTGCAAACCAAACT+TGG | - | chr4.4:28602984-28603003 | MS.gene56403:CDS | 30.0% | |
| ATGAAGAATTGGACAAGATT+AGG | - | chr4.4:28603090-28603109 | MS.gene56403:intron | 30.0% | |
| ATTGTATTGAAGGAAAATCC+AGG | - | chr4.4:28604838-28604857 | MS.gene56403:CDS | 30.0% | |
| CACAATGTGTCAAAATATGT+AGG | + | chr4.4:28605563-28605582 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | + | chr4.4:28605131-28605150 | None:intergenic | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | - | chr4.4:28605006-28605025 | MS.gene56403:CDS | 30.0% | |
| CATTATGAAACTCCACTTAA+GGG | - | chr4.4:28603766-28603785 | MS.gene56403:CDS | 30.0% | |
| CTTATGAATCAGTAGAACTT+AGG | - | chr4.4:28605287-28605306 | MS.gene56403:CDS | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | + | chr4.4:28605059-28605078 | None:intergenic | 30.0% | |
| TATGATGCTTCAATAATGGT+CGG | - | chr4.4:28603428-28603447 | MS.gene56403:intron | 30.0% | |
| TGTCTATGATGCTTCAATAA+TGG | - | chr4.4:28603424-28603443 | MS.gene56403:intron | 30.0% | |
| TGTTACTATCATTCTTTGCT+AGG | - | chr4.4:28602954-28602973 | MS.gene56403:CDS | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | - | chr4.4:28604721-28604740 | MS.gene56403:intron | 30.0% | |
| TTGTTACATATGCCTGTATT+TGG | - | chr4.4:28603830-28603849 | MS.gene56403:CDS | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | - | chr4.4:28605403-28605422 | MS.gene56403:CDS | 30.0% |
| ! | ATTGAAGCATCATAGACAAA+TGG | + | chr4.4:28603422-28603441 | None:intergenic | 30.0% |
| ! | CAAAGATGTTGAGAATTTTG+CGG | + | chr4.4:28602910-28602929 | None:intergenic | 30.0% |
| ! | CTCATGAAATCAACTTTTGT+TGG | + | chr4.4:28603691-28603710 | None:intergenic | 30.0% |
| ! | TATAATTTTCACCACCATGT+AGG | + | chr4.4:28605194-28605213 | None:intergenic | 30.0% |
| ! | TGGATTTTCCTTCAATACAA+TGG | + | chr4.4:28604839-28604858 | None:intergenic | 30.0% |
| !! | CTAAATGCAATTTTGAAGAG+AGG | - | chr4.4:28604420-28604439 | MS.gene56403:intron | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | + | chr4.4:28605289-28605308 | None:intergenic | 30.0% |
| !!! | AAATTTTTTACGAAGAGAGG+GGG | - | chr4.4:28603571-28603590 | MS.gene56403:CDS | 30.0% |
| !!! | CTACATATTTTGACACATTG+TGG | - | chr4.4:28605561-28605580 | MS.gene56403:CDS | 30.0% |
| !!! | GAAATTTTTTACGAAGAGAG+GGG | - | chr4.4:28603570-28603589 | MS.gene56403:CDS | 30.0% |
| AAAGTATGATGAAGTAGTGG+TGG | - | chr4.4:28603067-28603086 | MS.gene56403:intron | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | - | chr4.4:28605366-28605385 | MS.gene56403:CDS | 35.0% | |
| AAGAATTGGACAAGATTAGG+AGG | - | chr4.4:28603093-28603112 | MS.gene56403:intron | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | + | chr4.4:28605053-28605072 | None:intergenic | 35.0% | |
| AGAAGATGAGAAACCAAGTT+TGG | + | chr4.4:28603000-28603019 | None:intergenic | 35.0% | |
| AGTGGAGTTTCATAATGCAA+AGG | + | chr4.4:28603763-28603782 | None:intergenic | 35.0% | |
| ATGAGTTTGTCACCGTTTAT+TGG | + | chr4.4:28604802-28604821 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | - | chr4.4:28605012-28605031 | MS.gene56403:CDS | 35.0% | |
| ATGCCAGCTTATGAGTTAAA+AGG | + | chr4.4:28604367-28604386 | None:intergenic | 35.0% | |
| ATGGTCGGTTACATAAAACT+TGG | - | chr4.4:28603443-28603462 | MS.gene56403:intron | 35.0% | |
| ATTTGAATACAGCGCATTAC+AGG | + | chr4.4:28604457-28604476 | None:intergenic | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | + | chr4.4:28605708-28605727 | None:intergenic | 35.0% | |
| CAAATAACTGAACCGTAAAC+AGG | + | chr4.4:28604096-28604115 | None:intergenic | 35.0% | |
| CTACAGATAATAGTGAATGC+TGG | - | chr4.4:28604544-28604563 | MS.gene56403:intron | 35.0% | |
| CTATGGTTATTTGAGTGGTT+CGG | - | chr4.4:28603988-28604007 | MS.gene56403:CDS | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | + | chr4.4:28604957-28604976 | None:intergenic | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | - | chr4.4:28605045-28605064 | MS.gene56403:CDS | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | - | chr4.4:28605217-28605236 | MS.gene56403:CDS | 35.0% | |
| GATATCCTCTTGAGAATGTT+AGG | - | chr4.4:28603255-28603274 | MS.gene56403:CDS | 35.0% | |
| GCATTATGAAACTCCACTTA+AGG | - | chr4.4:28603765-28603784 | MS.gene56403:CDS | 35.0% | |
| GGTTATCAATGGTTTAGAGA+AGG | - | chr4.4:28603226-28603245 | MS.gene56403:intron | 35.0% | |
| GGTTGTATGGTGTTTGATAT+GGG | - | chr4.4:28603353-28603372 | MS.gene56403:CDS | 35.0% | |
| TAAATGAGAGAGCTTCTCAA+AGG | + | chr4.4:28604340-28604359 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | - | chr4.4:28604952-28604971 | MS.gene56403:CDS | 35.0% | |
| TGCAAAGTATGATGAAGTAG+TGG | - | chr4.4:28603064-28603083 | MS.gene56403:intron | 35.0% | |
| TGGTTGTATGGTGTTTGATA+TGG | - | chr4.4:28603352-28603371 | MS.gene56403:CDS | 35.0% | |
| TTTATGTTGCTGTACAGGAA+GGG | - | chr4.4:28605604-28605623 | MS.gene56403:CDS | 35.0% | |
| ! | AGGCAATATCAGAGAGTTTT+GGG | - | chr4.4:28603198-28603217 | MS.gene56403:intron | 35.0% |
| ! | TCTCCTTGATGATTTCTCTT+AGG | + | chr4.4:28603729-28603748 | None:intergenic | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | - | chr4.4:28605603-28605622 | MS.gene56403:CDS | 35.0% |
| !! | CTTCCTTTTAACTCATAAGC+TGG | - | chr4.4:28604361-28604380 | MS.gene56403:intron | 35.0% |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | - | chr4.4:28605599-28605618 | MS.gene56403:CDS | 35.0% |
| !!! | AATTTTTTACGAAGAGAGGG+GGG | - | chr4.4:28603572-28603591 | MS.gene56403:CDS | 35.0% |
| AACCAACGCGGTATAAACAA+TGG | + | chr4.4:28604933-28604952 | None:intergenic | 40.0% | |
| AACTCCACTTAAGGGATTTC+AGG | - | chr4.4:28603774-28603793 | MS.gene56403:CDS | 40.0% | |
| AAGATTAGGAGGCTTCAGAA+TGG | - | chr4.4:28603104-28603123 | MS.gene56403:intron | 40.0% | |
| AATGTGCTCATGAAACAAGC+GGG | + | chr4.4:28603392-28603411 | None:intergenic | 40.0% | |
| AATTAGCAATGCCTGCACTA+TGG | - | chr4.4:28603971-28603990 | MS.gene56403:CDS | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | - | chr4.4:28605647-28605666 | MS.gene56403:CDS | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | - | chr4.4:28605177-28605196 | MS.gene56403:intron | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | - | chr4.4:28605220-28605239 | MS.gene56403:CDS | 40.0% | |
| ATTGAATAGGGCATAAGGCA+AGG | + | chr4.4:28603871-28603890 | None:intergenic | 40.0% | |
| CAAACCTGAAATCCCTTAAG+TGG | + | chr4.4:28603781-28603800 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | - | chr4.4:28604969-28604988 | MS.gene56403:CDS | 40.0% | |
| CAATGTGCTCATGAAACAAG+CGG | + | chr4.4:28603393-28603412 | None:intergenic | 40.0% | |
| CACTCAAATAACCATAGTGC+AGG | + | chr4.4:28603985-28604004 | None:intergenic | 40.0% | |
| CAGTTTAACCATGACTCAGA+CGG | - | chr4.4:28604044-28604063 | MS.gene56403:CDS | 40.0% | |
| CATAAGCTGGCATAAAGCAT+AGG | - | chr4.4:28604374-28604393 | MS.gene56403:intron | 40.0% | |
| CCATGAATTGACCCTGTTTA+CGG | - | chr4.4:28604081-28604100 | MS.gene56403:intron | 40.0% | |
| CCTCGAAATGCTAAAGCAAA+AGG | - | chr4.4:28605328-28605347 | MS.gene56403:CDS | 40.0% | |
| CTGCACTATGGTTATTTGAG+TGG | - | chr4.4:28603983-28604002 | MS.gene56403:CDS | 40.0% | |
| GCACCTAAGAGAAATCATCA+AGG | - | chr4.4:28603723-28603742 | MS.gene56403:CDS | 40.0% | |
| GGAACTACGGCATTTATGAT+AGG | - | chr4.4:28603905-28603924 | MS.gene56403:CDS | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | - | chr4.4:28604592-28604611 | MS.gene56403:intron | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | - | chr4.4:28605646-28605665 | MS.gene56403:CDS | 40.0% | |
| TGACAAACTCATTGCTCTCA+TGG | - | chr4.4:28604810-28604829 | MS.gene56403:intron | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | + | chr4.4:28604649-28604668 | None:intergenic | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | + | chr4.4:28605326-28605345 | None:intergenic | 40.0% | |
| TGTTGATACAAATGACACCC+CGG | - | chr4.4:28605686-28605705 | MS.gene56403:CDS | 40.0% | |
| TTCAAACCATTGCGTGTGTA+AGG | + | chr4.4:28603553-28603572 | None:intergenic | 40.0% | |
| TTGAATAGGGCATAAGGCAA+GGG | + | chr4.4:28603870-28603889 | None:intergenic | 40.0% | |
| TTTAAGCAGAGTAGACACTC+TGG | + | chr4.4:28603662-28603681 | None:intergenic | 40.0% | |
| TTTCCTTCTCTATGAGTCAG+TGG | + | chr4.4:28604236-28604255 | None:intergenic | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | + | chr4.4:28605707-28605726 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | + | chr4.4:28605331-28605350 | None:intergenic | 40.0% |
| ! | CTGCTTTAAACCACTAGAAC+CGG | + | chr4.4:28604027-28604046 | None:intergenic | 40.0% |
| ! | GAAGCATCATAGACAAATGG+AGG | + | chr4.4:28603419-28603438 | None:intergenic | 40.0% |
| ! | GAGGCAATATCAGAGAGTTT+TGG | - | chr4.4:28603197-28603216 | MS.gene56403:intron | 40.0% |
| ! | GGCAATATCAGAGAGTTTTG+GGG | - | chr4.4:28603199-28603218 | MS.gene56403:intron | 40.0% |
| ! | TGAGAATTTTGCGGAAGTAG+AGG | + | chr4.4:28602901-28602920 | None:intergenic | 40.0% |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | + | chr4.4:28604698-28604717 | None:intergenic | 40.0% |
| !! | AGTAGTGGTGGATGAAGAAT+TGG | - | chr4.4:28603079-28603098 | MS.gene56403:intron | 40.0% |
| !! | GGGTGTCATTTGTATCAACA+AGG | + | chr4.4:28605686-28605705 | None:intergenic | 40.0% |
| AATTTAGACCCTGTGACTCG+AGG | + | chr4.4:28603299-28603318 | None:intergenic | 45.0% | |
| ACATGACCTAGAGGTCTCAT+TGG | - | chr4.4:28604157-28604176 | MS.gene56403:intron | 45.0% | |
| ACTCTCTGATATTGCCTCCA+CGG | + | chr4.4:28603195-28603214 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | - | chr4.4:28604972-28604991 | MS.gene56403:CDS | 45.0% | |
| ATCCAACCAATGAGACCTCT+AGG | + | chr4.4:28604166-28604185 | None:intergenic | 45.0% | |
| ATTTAGACCCTGTGACTCGA+GGG | + | chr4.4:28603298-28603317 | None:intergenic | 45.0% | |
| CACCATTGTTTATACCGCGT+TGG | - | chr4.4:28604928-28604947 | MS.gene56403:CDS | 45.0% | |
| CATGACTCAGACGGTTCAAT+CGG | - | chr4.4:28604053-28604072 | MS.gene56403:CDS | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | - | chr4.4:28604828-28604847 | MS.gene56403:intron | 45.0% | |
| CATTTGCCTTACACACGCAA+TGG | - | chr4.4:28603544-28603563 | MS.gene56403:intron | 45.0% | |
| CCGTAAACAGGGTCAATTCA+TGG | + | chr4.4:28604084-28604103 | None:intergenic | 45.0% | |
| GACACCCTAACATTCTCAAG+AGG | + | chr4.4:28603263-28603282 | None:intergenic | 45.0% | |
| GATACCGATGTTGACAGAAG+CGG | - | chr4.4:28604754-28604773 | MS.gene56403:intron | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | - | chr4.4:28604973-28604992 | MS.gene56403:CDS | 45.0% | |
| GGATGTTAGAGGAGTTGCAT+TGG | - | chr4.4:28603130-28603149 | MS.gene56403:intron | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | - | chr4.4:28605658-28605677 | MS.gene56403:CDS | 45.0% | |
| GTTAGAGGAGTTGCATTGGA+AGG | - | chr4.4:28603134-28603153 | MS.gene56403:intron | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | - | chr4.4:28604663-28604682 | MS.gene56403:intron | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | - | chr4.4:28605616-28605635 | MS.gene56403:CDS | 45.0% | |
| TAGGAGGCTTCAGAATGGTT+CGG | - | chr4.4:28603109-28603128 | MS.gene56403:intron | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | + | chr4.4:28604664-28604683 | None:intergenic | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | + | chr4.4:28604859-28604878 | None:intergenic | 45.0% | |
| TCTCTGCATCTCAAACCTGA+TGG | - | chr4.4:28604631-28604650 | MS.gene56403:intron | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | + | chr4.4:28604945-28604964 | None:intergenic | 45.0% | |
| TGCTAAAGCAAAAGGATCGG+AGG | - | chr4.4:28605336-28605355 | MS.gene56403:CDS | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | + | chr4.4:28605706-28605725 | None:intergenic | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | - | chr4.4:28605232-28605251 | MS.gene56403:CDS | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | - | chr4.4:28605233-28605252 | MS.gene56403:CDS | 45.0% |
| ! | CAGAATGGTTCGGATGTTAG+AGG | - | chr4.4:28603119-28603138 | MS.gene56403:intron | 45.0% |
| ! | GAGAATGTTAGGGTGTCTCT+TGG | - | chr4.4:28603266-28603285 | MS.gene56403:CDS | 45.0% |
| ! | GAGCGATCACAGTTTCGTTT+TGG | - | chr4.4:28604115-28604134 | MS.gene56403:intron | 45.0% |
| ! | GCAATTTTGTCCTCGGGATT+GGG | + | chr4.4:28604676-28604695 | None:intergenic | 45.0% |
| ! | GGTCTCATTGGTTGGATGTT+CGG | - | chr4.4:28604169-28604188 | MS.gene56403:intron | 45.0% |
| ! | GTGCAGGCATTGCTAATTCA+TGG | + | chr4.4:28603969-28603988 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | + | chr4.4:28604683-28604702 | None:intergenic | 45.0% |
| ! | TTGAGTGTTGCAGTGTTTGC+CGG | - | chr4.4:28603317-28603336 | MS.gene56403:CDS | 45.0% |
| ! | TTTGAGATGCAGAGAGCCAA+AGG | + | chr4.4:28604626-28604645 | None:intergenic | 45.0% |
| !! | AAGCTTGGTGCAGATACCTT+TGG | - | chr4.4:28604607-28604626 | MS.gene56403:intron | 45.0% |
| !! | TCTCCACTGACTCATAGAGA+AGG | - | chr4.4:28604230-28604249 | MS.gene56403:intron | 45.0% |
| !! | TGTACGAGCATCGGTTACTA+TGG | + | chr4.4:28604869-28604888 | None:intergenic | 45.0% |
| !! | TTTGGGGAGTGGGTTATCAA+TGG | - | chr4.4:28603215-28603234 | MS.gene56403:intron | 45.0% |
| !!! | ATCAGAGAGTTTTGGGGAGT+GGG | - | chr4.4:28603205-28603224 | MS.gene56403:intron | 45.0% |
| !!! | TATCAGAGAGTTTTGGGGAG+TGG | - | chr4.4:28603204-28603223 | MS.gene56403:intron | 45.0% |
| AATGCTGGAAACGGTTCAGG+AGG | - | chr4.4:28604559-28604578 | MS.gene56403:intron | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | - | chr4.4:28605607-28605626 | MS.gene56403:CDS | 50.0% | |
| CGACATGCTTGTACGAGCAT+CGG | + | chr4.4:28604878-28604897 | None:intergenic | 50.0% | |
| CGATTGAACCGTCTGAGTCA+TGG | + | chr4.4:28604055-28604074 | None:intergenic | 50.0% | |
| GACCTAGAGGTCTCATTGGT+TGG | - | chr4.4:28604161-28604180 | MS.gene56403:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | - | chr4.4:28605657-28605676 | MS.gene56403:CDS | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | - | chr4.4:28605238-28605257 | MS.gene56403:CDS | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | - | chr4.4:28605615-28605634 | MS.gene56403:CDS | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | - | chr4.4:28604556-28604575 | MS.gene56403:intron | 50.0% | |
| GTTGCATTGGAAGGCGAGAA+AGG | - | chr4.4:28603143-28603162 | MS.gene56403:intron | 50.0% | |
| TAATGAAGGGGCCTACATGG+TGG | - | chr4.4:28605180-28605199 | MS.gene56403:CDS | 50.0% | |
| TCCCGAGGACAAAATTGCCA+TGG | - | chr4.4:28604678-28604697 | MS.gene56403:intron | 50.0% | |
| ! | CACTTTCGTTCCGGTTCTAG+TGG | - | chr4.4:28604014-28604033 | MS.gene56403:CDS | 50.0% |
| ! | GCCATGGCAATTTTGTCCTC+GGG | + | chr4.4:28604682-28604701 | None:intergenic | 50.0% |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | + | chr4.4:28604677-28604696 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | - | chr4.4:28604772-28604791 | MS.gene56403:intron | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | - | chr4.4:28604773-28604792 | MS.gene56403:intron | 50.0% |
| !! | TCTTGCTCGTGCTGGTTGTA+TGG | - | chr4.4:28603340-28603359 | MS.gene56403:CDS | 50.0% |
| ACAACCAGCACGAGCAAGAC+CGG | + | chr4.4:28603339-28603358 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | - | chr4.4:28605619-28605638 | MS.gene56403:CDS | 55.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | + | chr4.4:28604761-28604780 | None:intergenic | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | - | chr4.4:28605620-28605639 | MS.gene56403:CDS | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | - | chr4.4:28605636-28605655 | MS.gene56403:CDS | 55.0% | |
| GTTCGGTCGCACTTTCGTTC+CGG | - | chr4.4:28604005-28604024 | MS.gene56403:CDS | 55.0% | |
| TCTGATATTGCCTCCACGGC+AGG | + | chr4.4:28603191-28603210 | None:intergenic | 55.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | - | chr4.4:28604759-28604778 | MS.gene56403:intron | 60.0% | |
| GATATTGCCTCCACGGCAGG+AGG | + | chr4.4:28603188-28603207 | None:intergenic | 60.0% | |
| TTTGCCGGTCTTGCTCGTGC+TGG | - | chr4.4:28603332-28603351 | MS.gene56403:CDS | 60.0% | |
| CCTCCACGGCAGGAGGAGTA+AGG | + | chr4.4:28603181-28603200 | None:intergenic | 65.0% | |
| CCTTACTCCTCCTGCCGTGG+AGG | - | chr4.4:28603178-28603197 | MS.gene56403:intron | 65.0% | |
| CGACCTTACTCCTCCTGCCG+TGG | - | chr4.4:28603175-28603194 | MS.gene56403:intron | 65.0% | |
| GACGCGACCCTCGAGTCACA+GGG | - | chr4.4:28603288-28603307 | MS.gene56403:CDS | 65.0% | |
| ! | AGGGGGGCTGACTTCACTGG+AGG | - | chr4.4:28603588-28603607 | MS.gene56403:CDS | 65.0% |
| ! | GAGAGGGGGGCTGACTTCAC+TGG | - | chr4.4:28603585-28603604 | MS.gene56403:CDS | 65.0% |
| GGACGCGACCCTCGAGTCAC+AGG | - | chr4.4:28603287-28603306 | MS.gene56403:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 28602891 | 28605733 | 28602891 | ID=MS.gene56403 |
| chr4.4 | mRNA | 28602891 | 28605733 | 28602891 | ID=MS.gene56403.t1;Parent=MS.gene56403 |
| chr4.4 | exon | 28605179 | 28605733 | 28605179 | ID=MS.gene56403.t1.exon1;Parent=MS.gene56403.t1 |
| chr4.4 | CDS | 28605179 | 28605733 | 28605179 | ID=cds.MS.gene56403.t1;Parent=MS.gene56403.t1 |
| chr4.4 | exon | 28604829 | 28605092 | 28604829 | ID=MS.gene56403.t1.exon2;Parent=MS.gene56403.t1 |
| chr4.4 | CDS | 28604829 | 28605092 | 28604829 | ID=cds.MS.gene56403.t1;Parent=MS.gene56403.t1 |
| chr4.4 | exon | 28603558 | 28604074 | 28603558 | ID=MS.gene56403.t1.exon3;Parent=MS.gene56403.t1 |
| chr4.4 | CDS | 28603558 | 28604074 | 28603558 | ID=cds.MS.gene56403.t1;Parent=MS.gene56403.t1 |
| chr4.4 | exon | 28603237 | 28603436 | 28603237 | ID=MS.gene56403.t1.exon4;Parent=MS.gene56403.t1 |
| chr4.4 | CDS | 28603237 | 28603436 | 28603237 | ID=cds.MS.gene56403.t1;Parent=MS.gene56403.t1 |
| chr4.4 | exon | 28602891 | 28603003 | 28602891 | ID=MS.gene56403.t1.exon5;Parent=MS.gene56403.t1 |
| chr4.4 | CDS | 28602891 | 28603003 | 28602891 | ID=cds.MS.gene56403.t1;Parent=MS.gene56403.t1 |
| Gene Sequence |
| Protein sequence |
