Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56074.t1 | XP_003607905.1 | 97.3 | 623 | 15 | 1 | 1 | 623 | 1 | 621 | 0.00E+00 | 1213.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56074.t1 | Q88BD4 | 28.3 | 434 | 277 | 13 | 93 | 521 | 17 | 421 | 7.3e-38 | 160.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56074.t1 | G7JJZ2 | 97.3 | 623 | 15 | 1 | 1 | 623 | 1 | 621 | 0.0e+00 | 1213.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene56074 | -0.826953 | 2.04E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene56074 | 0.809009 | 2.34E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene56074 | -0.828691 | 7.81E-55 | -1.69E-46 |
| MS.gene050811 | MS.gene56074 | -0.832627 | 8.49E-56 | -1.69E-46 |
| MS.gene05081 | MS.gene56074 | 0.83356 | 4.97E-56 | -1.69E-46 |
| MS.gene051208 | MS.gene56074 | 0.821422 | 4.07E-53 | -1.69E-46 |
| MS.gene051244 | MS.gene56074 | 0.816115 | 6.53E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene56074 | 0.846386 | 2.24E-59 | -1.69E-46 |
| MS.gene051552 | MS.gene56074 | -0.849993 | 2.26E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene56074 | 0.8113 | 7.50E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene56074 | -0.822179 | 2.72E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene56074 | 0.830103 | 3.55E-55 | -1.69E-46 |
| MS.gene052135 | MS.gene56074 | 0.810315 | 1.23E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene56074 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene56074 | 0.80299 | 4.32E-49 | -1.69E-46 |
| MS.gene052589 | MS.gene56074 | 0.856226 | 3.71E-62 | -1.69E-46 |
| MS.gene053330 | MS.gene56074 | 0.876476 | 1.35E-68 | -1.69E-46 |
| MS.gene054102 | MS.gene56074 | 0.816788 | 4.62E-52 | -1.69E-46 |
| MS.gene054103 | MS.gene56074 | 0.803496 | 3.39E-49 | -1.69E-46 |
| MS.gene054107 | MS.gene56074 | 0.836695 | 8.05E-57 | -1.69E-46 |
| MS.gene054110 | MS.gene56074 | 0.831423 | 1.68E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene56074 | 0.860793 | 1.61E-63 | -1.69E-46 |
| MS.gene054344 | MS.gene56074 | 0.83679 | 7.61E-57 | -1.69E-46 |
| MS.gene054719 | MS.gene56074 | 0.806538 | 7.83E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene56074 | -0.831822 | 1.34E-55 | -1.69E-46 |
| MS.gene055370 | MS.gene56074 | 0.856024 | 4.26E-62 | -1.69E-46 |
| MS.gene055488 | MS.gene56074 | -0.80738 | 5.20E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene56074 | 0.801359 | 9.35E-49 | -1.69E-46 |
| MS.gene05556 | MS.gene56074 | 0.80023 | 1.59E-48 | -1.69E-46 |
| MS.gene056351 | MS.gene56074 | 0.884218 | 2.31E-71 | -1.69E-46 |
| MS.gene056514 | MS.gene56074 | 0.801594 | 8.36E-49 | -1.69E-46 |
| MS.gene056633 | MS.gene56074 | 0.89578 | 6.92E-76 | -1.69E-46 |
| MS.gene056664 | MS.gene56074 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene056877 | MS.gene56074 | 0.85 | 2.25E-60 | -1.69E-46 |
| MS.gene057196 | MS.gene56074 | 0.856592 | 2.90E-62 | -1.69E-46 |
| MS.gene057332 | MS.gene56074 | 0.848167 | 7.28E-60 | -1.69E-46 |
| MS.gene057658 | MS.gene56074 | 0.800775 | 1.23E-48 | -1.69E-46 |
| MS.gene058418 | MS.gene56074 | -0.834106 | 3.63E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene56074 | 0.840303 | 9.43E-58 | -1.69E-46 |
| MS.gene058746 | MS.gene56074 | 0.884388 | 2.00E-71 | -1.69E-46 |
| MS.gene059061 | MS.gene56074 | -0.811337 | 7.36E-51 | -1.69E-46 |
| MS.gene05914 | MS.gene56074 | 0.809754 | 1.62E-50 | -1.69E-46 |
| MS.gene059303 | MS.gene56074 | 0.82441 | 8.20E-54 | -1.69E-46 |
| MS.gene059512 | MS.gene56074 | 0.970601 | 7.26E-132 | -1.69E-46 |
| MS.gene060087 | MS.gene56074 | -0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene56074 | 0.807609 | 4.65E-50 | -1.69E-46 |
| MS.gene061231 | MS.gene56074 | 0.81685 | 4.47E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56074 | MS.gene005970 | PPI |
| MS.gene56074 | MS.gene34039 | PPI |
| MS.gene56074 | MS.gene54796 | PPI |
| MS.gene56074 | MS.gene49437 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56074.t1 | MTR_4g084270 | 97.271 | 623 | 15 | 1 | 1 | 623 | 1 | 621 | 0.0 | 1255 |
| MS.gene56074.t1 | MTR_1g094980 | 42.908 | 557 | 273 | 12 | 73 | 617 | 18 | 541 | 1.81e-136 | 409 |
| MS.gene56074.t1 | MTR_1g094980 | 40.640 | 625 | 315 | 16 | 15 | 617 | 23 | 613 | 3.15e-135 | 409 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56074.t1 | AT1G70820 | 73.710 | 620 | 151 | 6 | 1 | 617 | 1 | 611 | 0.0 | 946 |
| MS.gene56074.t1 | AT1G70820 | 74.457 | 599 | 141 | 6 | 1 | 596 | 1 | 590 | 0.0 | 923 |
| MS.gene56074.t1 | AT5G17530 | 43.643 | 527 | 256 | 10 | 75 | 590 | 20 | 516 | 6.03e-134 | 403 |
| MS.gene56074.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene56074.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene56074.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene56074.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene56074.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 85 | 588 | 6.18e-133 | 403 |
| MS.gene56074.t1 | AT5G17530 | 44.466 | 524 | 248 | 11 | 70 | 580 | 85 | 578 | 4.28e-132 | 402 |
Find 142 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATAAGTTTGTTGAAAA+TGG | 0.159254 | 4.4:+28170871 | MS.gene56074:CDS |
| AACTCCACTTAAGGGATTTC+AGG | 0.200454 | 4.4:+28168406 | MS.gene56074:CDS |
| TCTCCTTGATGATTTCTCTT+AGG | 0.241263 | 4.4:-28168358 | None:intergenic |
| GTACAGGAAGGGAGGCTTAA+AGG | 0.243975 | 4.4:+28170247 | MS.gene56074:intron |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4.4:-28169431 | None:intergenic |
| GATATCCTCTTGAGAATGTT+AGG | 0.280295 | 4.4:+28167887 | MS.gene56074:CDS |
| GAGGCAATATCAGAGAGTTT+TGG | 0.300966 | 4.4:+28167829 | MS.gene56074:CDS |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4.4:-28169586 | None:intergenic |
| TGCAAGTTCACAGCAATGTT+TGG | 0.318198 | 4.4:-28170650 | None:intergenic |
| TGGTTGTATGGTGTTTGATA+TGG | 0.318441 | 4.4:+28167984 | MS.gene56074:CDS |
| AATGGTTTAGAGAAGGAAAA+AGG | 0.330346 | 4.4:+28167865 | MS.gene56074:CDS |
| GCATTATGAAACTCCACTTA+AGG | 0.337071 | 4.4:+28168397 | MS.gene56074:CDS |
| TGCTTTAGCATTTCGAGGTT+CGG | 0.347623 | 4.4:-28169955 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4.4:+28169353 | MS.gene56074:CDS |
| CATTATGAAACTCCACTTAA+GGG | 0.365922 | 4.4:+28168398 | MS.gene56074:CDS |
| TGTCTATGATGCTTCAATAA+TGG | 0.374026 | 4.4:+28168056 | MS.gene56074:CDS |
| CTTATTACAGATTTATTGAA+TGG | 0.379212 | 4.4:-28167655 | None:intergenic |
| TTCAAACCATTGCGTGTGTA+AGG | 0.384986 | 4.4:-28168182 | None:intergenic |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4.4:+28169188 | MS.gene56074:CDS |
| ATGAAGAATTGGACAAGATT+AGG | 0.394518 | 4.4:+28167722 | MS.gene56074:CDS |
| AGAAGATGAGAAACCAAGTT+TGG | 0.394739 | 4.4:-28167629 | None:intergenic |
| GTAATAAGTGTGAAATGTTA+TGG | 0.397911 | 4.4:+28167670 | MS.gene56074:CDS |
| GCAAGTTCACAGCAATGTTT+GGG | 0.402997 | 4.4:-28170649 | None:intergenic |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4.4:+28169677 | MS.gene56074:CDS |
| TGTACGAGCATCGGTTACTA+TGG | 0.406310 | 4.4:-28169498 | None:intergenic |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4.4:+28170278 | MS.gene56074:CDS |
| TTTGGGGAGTGGGTTATCAA+TGG | 0.408829 | 4.4:+28167847 | MS.gene56074:CDS |
| GGTTGTATGGTGTTTGATAT+GGG | 0.413997 | 4.4:+28167985 | MS.gene56074:CDS |
| TACAGGAAGGGAGGCTTAAA+GGG | 0.417177 | 4.4:+28170248 | MS.gene56074:intron |
| CATGGCTGCCATTGTATTGA+AGG | 0.421469 | 4.4:+28169460 | MS.gene56074:CDS |
| TTGAGTGTTGCAGTGTTTGC+CGG | 0.424973 | 4.4:+28167949 | MS.gene56074:CDS |
| ATATCTTTGCAAACCAAACT+TGG | 0.425190 | 4.4:+28167616 | MS.gene56074:CDS |
| TCTTGCTCGTGCTGGTTGTA+TGG | 0.433556 | 4.4:+28167972 | MS.gene56074:CDS |
| TCGGGATTGGGAATGTGATT+AGG | 0.440559 | 4.4:-28169293 | None:intergenic |
| CAGAATGGTTCGGATGTTAG+AGG | 0.441225 | 4.4:+28167751 | MS.gene56074:CDS |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4.4:+28169239 | MS.gene56074:CDS |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4.4:-28169682 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4.4:-28169918 | None:intergenic |
| AGTAGTGGTGGATGAAGAAT+TGG | 0.460522 | 4.4:+28167711 | MS.gene56074:CDS |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4.4:-28169488 | None:intergenic |
| TGTTACTATCATTCTTTGCT+AGG | 0.462385 | 4.4:+28167586 | MS.gene56074:CDS |
| CAAACCTGAAATCCCTTAAG+TGG | 0.467227 | 4.4:-28168410 | None:intergenic |
| TTTGCCGGTCTTGCTCGTGC+TGG | 0.468617 | 4.4:+28167964 | MS.gene56074:CDS |
| GGACGCGACCCTCGAGTCAC+AGG | 0.474920 | 4.4:+28167919 | MS.gene56074:CDS |
| GTTGCATTGGAAGGCGAGAA+AGG | 0.478585 | 4.4:+28167775 | MS.gene56074:CDS |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4.4:+28169419 | MS.gene56074:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4.4:-28169278 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4.4:+28170279 | MS.gene56074:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4.4:+28169638 | MS.gene56074:CDS |
| CCTCGAAATGCTAAAGCAAA+AGG | 0.489207 | 4.4:+28169960 | MS.gene56074:CDS |
| CCTCCACGGCAGGAGGAGTA+AGG | 0.491033 | 4.4:-28167810 | None:intergenic |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4.4:+28169833 | MS.gene56074:CDS |
| TCTGATATTGCCTCCACGGC+AGG | 0.494254 | 4.4:-28167820 | None:intergenic |
| ACTAAGTTTATAACTGATAG+AGG | 0.494389 | 4.4:+28169533 | MS.gene56074:CDS |
| CTTATGAATCAGTAGAACTT+AGG | 0.496088 | 4.4:+28169919 | MS.gene56074:CDS |
| TATCAATTTGAGCAATGTCT+AGG | 0.498567 | 4.4:-28170855 | None:intergenic |
| TAGGAGGCTTCAGAATGGTT+CGG | 0.500282 | 4.4:+28167741 | MS.gene56074:CDS |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4.4:+28170290 | MS.gene56074:CDS |
| TCAAGGAGGTTGCTTGTCAA+TGG | 0.508461 | 4.4:+28170682 | MS.gene56074:CDS |
| TGAACATGGACAACATGGTT+GGG | 0.514106 | 4.4:+28170601 | MS.gene56074:CDS |
| ATGAACATGGACAACATGGT+TGG | 0.518204 | 4.4:+28170600 | MS.gene56074:CDS |
| GAGAATGTTAGGGTGTCTCT+TGG | 0.518716 | 4.4:+28167898 | MS.gene56074:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4.4:+28169864 | MS.gene56074:CDS |
| ATTGAAGCATCATAGACAAA+TGG | 0.520839 | 4.4:-28168051 | None:intergenic |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4.4:+28169176 | MS.gene56074:intron |
| TCGTAAATATGCAAATAGAT+TGG | 0.522642 | 4.4:+28168268 | MS.gene56074:CDS |
| ATATTGATGCTCAAATGTAC+AGG | 0.524473 | 4.4:+28170344 | MS.gene56074:CDS |
| TGACAAACTCATTGCTCTCA+TGG | 0.524707 | 4.4:+28169442 | MS.gene56074:CDS |
| ATATAATGAAGGGGCCTACA+TGG | 0.525333 | 4.4:+28169809 | MS.gene56074:intron |
| TTTGAGCATCAATATGAGCC+GGG | 0.527926 | 4.4:-28170336 | None:intergenic |
| CATATTGTAAATCAGGCTGA+TGG | 0.528700 | 4.4:-28170895 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4.4:+28170289 | MS.gene56074:CDS |
| ATTTGAGCATCAATATGAGC+CGG | 0.540769 | 4.4:-28170337 | None:intergenic |
| ATATCCTCTTGAGAATGTTA+GGG | 0.543188 | 4.4:+28167888 | MS.gene56074:CDS |
| ACAACCAGCACGAGCAAGAC+CGG | 0.545469 | 4.4:-28167968 | None:intergenic |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4.4:+28169182 | MS.gene56074:CDS |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4.4:-28169255 | None:intergenic |
| ATTGTATTGAAGGAAAATCC+AGG | 0.558299 | 4.4:+28169470 | MS.gene56074:CDS |
| CACCATTGTTTATACCGCGT+TGG | 0.558868 | 4.4:+28169560 | MS.gene56074:CDS |
| AACAATGAACATGGACAACA+TGG | 0.562336 | 4.4:+28170596 | MS.gene56074:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4.4:-28169688 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4.4:+28169870 | MS.gene56074:CDS |
| CGACCTTACTCCTCCTGCCG+TGG | 0.566388 | 4.4:+28167807 | MS.gene56074:CDS |
| GGTTATCAATGGTTTAGAGA+AGG | 0.568136 | 4.4:+28167858 | MS.gene56074:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4.4:+28169224 | MS.gene56074:CDS |
| CATTTGCCTTACACACGCAA+TGG | 0.572460 | 4.4:+28168176 | MS.gene56074:CDS |
| GGATGTTAGAGGAGTTGCAT+TGG | 0.576031 | 4.4:+28167762 | MS.gene56074:CDS |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4.4:+28169405 | MS.gene56074:CDS |
| ATTTAGACCCTGTGACTCGA+GGG | 0.578792 | 4.4:-28167927 | None:intergenic |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.582640 | 4.4:+28169601 | MS.gene56074:CDS |
| CCTTACTCCTCCTGCCGTGG+AGG | 0.582653 | 4.4:+28167810 | MS.gene56074:CDS |
| AACTTGCAATCATCTGCTCA+AGG | 0.583771 | 4.4:+28170665 | MS.gene56074:CDS |
| GTTAGAGGAGTTGCATTGGA+AGG | 0.585950 | 4.4:+28167766 | MS.gene56074:CDS |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4.4:+28169263 | MS.gene56074:CDS |
| AGTGGAGTTTCATAATGCAA+AGG | 0.592830 | 4.4:-28168392 | None:intergenic |
| ATATTGTAAATCAGGCTGAT+GGG | 0.593285 | 4.4:-28170894 | None:intergenic |
| ATGTTGCTGTACAGGAAGGG+AGG | 0.593434 | 4.4:+28170239 | MS.gene56074:intron |
| AAGAATTGGACAAGATTAGG+AGG | 0.597154 | 4.4:+28167725 | MS.gene56074:CDS |
| GATATTGCCTCCACGGCAGG+AGG | 0.597822 | 4.4:-28167817 | None:intergenic |
| AAGATTAGGAGGCTTCAGAA+TGG | 0.602089 | 4.4:+28167736 | MS.gene56074:CDS |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4.4:+28169852 | MS.gene56074:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4.4:+28169849 | MS.gene56074:CDS |
| ACTCTCTGATATTGCCTCCA+CGG | 0.605057 | 4.4:-28167824 | None:intergenic |
| TCCCGAGGACAAAATTGCCA+TGG | 0.605099 | 4.4:+28169310 | MS.gene56074:CDS |
| GGAAGGGAGGCTTAAAGGGT+GGG | 0.606977 | 4.4:+28170252 | MS.gene56074:intron |
| GACGCGACCCTCGAGTCACA+GGG | 0.611240 | 4.4:+28167920 | MS.gene56074:CDS |
| GATACCGATGTTGACAGAAG+CGG | 0.611913 | 4.4:+28169386 | MS.gene56074:CDS |
| AATTTAGACCCTGTGACTCG+AGG | 0.613432 | 4.4:-28167928 | None:intergenic |
| AATGTGCTCATGAAACAAGC+GGG | 0.613902 | 4.4:-28168021 | None:intergenic |
| AAATGCTAAAGCAAAAGGAT+CGG | 0.620165 | 4.4:+28169965 | MS.gene56074:CDS |
| GAAGCATCATAGACAAATGG+AGG | 0.622415 | 4.4:-28168048 | None:intergenic |
| TGCTAAAGCAAAAGGATCGG+AGG | 0.622933 | 4.4:+28169968 | MS.gene56074:CDS |
| GGAGTTCAGCTTAACAAGGA+GGG | 0.622995 | 4.4:+28169605 | MS.gene56074:CDS |
| CAATGTGCTCATGAAACAAG+CGG | 0.623267 | 4.4:-28168022 | None:intergenic |
| GACACCCTAACATTCTCAAG+AGG | 0.625174 | 4.4:-28167892 | None:intergenic |
| CGACATGCTTGTACGAGCAT+CGG | 0.627032 | 4.4:-28169507 | None:intergenic |
| AGGAAGGGAGGCTTAAAGGG+TGG | 0.627499 | 4.4:+28170251 | MS.gene56074:intron |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4.4:+28169404 | MS.gene56074:CDS |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4.4:+28169865 | MS.gene56074:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4.4:+28169191 | MS.gene56074:CDS |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4.4:+28169584 | MS.gene56074:CDS |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4.4:+28169644 | MS.gene56074:CDS |
| TGCAAAGTATGATGAAGTAG+TGG | 0.641435 | 4.4:+28167696 | MS.gene56074:CDS |
| AACATGGTTGGGTACACATG+AGG | 0.643450 | 4.4:+28170612 | MS.gene56074:CDS |
| AAAGTATCAAACAATGAACA+TGG | 0.643511 | 4.4:+28170587 | MS.gene56074:CDS |
| GCACCTAAGAGAAATCATCA+AGG | 0.645515 | 4.4:+28168355 | MS.gene56074:CDS |
| AACCAACGCGGTATAAACAA+TGG | 0.648208 | 4.4:-28169562 | None:intergenic |
| TTTAAGCAGAGTAGACACTC+TGG | 0.648407 | 4.4:-28168291 | None:intergenic |
| GGGTGGGAGTTAGACTCATG+TGG | 0.663424 | 4.4:+28170268 | MS.gene56074:CDS |
| GGGTGTCATTTGTATCAACA+AGG | 0.663565 | 4.4:-28170315 | None:intergenic |
| AGGAGTTCAGCTTAACAAGG+AGG | 0.668823 | 4.4:+28169604 | MS.gene56074:CDS |
| CGATGTTGACAGAAGCGGCG+TGG | 0.670101 | 4.4:+28169391 | MS.gene56074:CDS |
| TTGAGCATCAATATGAGCCG+GGG | 0.674597 | 4.4:-28170335 | None:intergenic |
| TAATGAAGGGGCCTACATGG+TGG | 0.680927 | 4.4:+28169812 | MS.gene56074:intron |
| TGTTGATACAAATGACACCC+CGG | 0.681662 | 4.4:+28170318 | MS.gene56074:CDS |
| AAAGTATGATGAAGTAGTGG+TGG | 0.692926 | 4.4:+28167699 | MS.gene56074:CDS |
| TAATCACATTCCCAATCCCG+AGG | 0.693986 | 4.4:+28169295 | MS.gene56074:CDS |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4.4:+28169536 | MS.gene56074:CDS |
| TTGCAATCATCTGCTCAAGG+AGG | 0.704569 | 4.4:+28170668 | MS.gene56074:CDS |
| TGACATTTCGGTAACCAACG+CGG | 0.705467 | 4.4:-28169574 | None:intergenic |
| CACGCCGCTTCTGTCAACAT+CGG | 0.714678 | 4.4:-28169390 | None:intergenic |
| AACATTTCGAAACTACATCG+AGG | 0.755001 | 4.4:+28169998 | MS.gene56074:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTATTTTTTACAAAAA+AGG | + | chr4.4:28170471-28170490 | MS.gene56074:intron | 10.0% |
| !! | AAGATCTTAATATATTGAAT+AGG | - | chr4.4:28168516-28168535 | None:intergenic | 15.0% |
| !! | AGATCTTAATATATTGAATA+GGG | - | chr4.4:28168515-28168534 | None:intergenic | 15.0% |
| !! | ATTCAATATATTAAGATCTT+AGG | + | chr4.4:28168516-28168535 | MS.gene56074:intron | 15.0% |
| !! | TGAAAAAATCCTTATATTTA+AGG | - | chr4.4:28170440-28170459 | None:intergenic | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | - | chr4.4:28170804-28170823 | None:intergenic | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | + | chr4.4:28169799-28169818 | MS.gene56074:intron | 15.0% |
| !! | TTTCTGTATATATATAATGA+AGG | + | chr4.4:28169798-28169817 | MS.gene56074:intron | 15.0% |
| !!! | AAATTTTCAAAGAAAATAGA+GGG | - | chr4.4:28169123-28169142 | None:intergenic | 15.0% |
| !!! | TAAATTTTCAAAGAAAATAG+AGG | - | chr4.4:28169124-28169143 | None:intergenic | 15.0% |
| !!! | TTATTTTTTACAAAAAAGGA+CGG | + | chr4.4:28170475-28170494 | MS.gene56074:intron | 15.0% |
| !! | CTTATTACAGATTTATTGAA+TGG | - | chr4.4:28167658-28167677 | None:intergenic | 20.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | + | chr4.4:28170428-28170447 | MS.gene56074:intron | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | + | chr4.4:28169833-28169852 | MS.gene56074:CDS | 20.0% |
| !! | TACACGTATATAAAAAATTG+TGG | - | chr4.4:28170110-28170129 | None:intergenic | 20.0% |
| !! | TCTGTATATATATAATGAAG+GGG | + | chr4.4:28169800-28169819 | MS.gene56074:intron | 20.0% |
| !!! | ATTATGTATAGTACTTTTGA+AGG | - | chr4.4:28168102-28168121 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | + | chr4.4:28170871-28170890 | MS.gene56074:CDS | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | - | chr4.4:28170743-28170762 | None:intergenic | 20.0% |
| ! | AATATATTGAATAGGGCATA+AGG | - | chr4.4:28168508-28168527 | None:intergenic | 25.0% |
| ! | AATTGCATTTAGACTTAGTT+TGG | - | chr4.4:28169044-28169063 | None:intergenic | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | + | chr4.4:28170207-28170226 | MS.gene56074:intron | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | + | chr4.4:28169533-28169552 | MS.gene56074:CDS | 25.0% |
| ! | ACTAGTTAAACTGTTCAATT+CGG | - | chr4.4:28168574-28168593 | None:intergenic | 25.0% |
| ! | ATTTAGAAGATACCAAATAC+AGG | - | chr4.4:28168477-28168496 | None:intergenic | 25.0% |
| ! | CAAAATGTGCTTATAAATAG+AGG | - | chr4.4:28170403-28170422 | None:intergenic | 25.0% |
| ! | GTAATAAGTGTGAAATGTTA+TGG | + | chr4.4:28167670-28167689 | MS.gene56074:CDS | 25.0% |
| ! | GTTATTTATTCAACAGATGA+CGG | + | chr4.4:28168148-28168167 | MS.gene56074:intron | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | - | chr4.4:28170780-28170799 | None:intergenic | 25.0% |
| ! | TATTAAGATCTTAGGAACTA+CGG | + | chr4.4:28168524-28168543 | MS.gene56074:intron | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | + | chr4.4:28170765-28170784 | MS.gene56074:intron | 25.0% |
| ! | TCGTAAATATGCAAATAGAT+TGG | + | chr4.4:28168268-28168287 | MS.gene56074:CDS | 25.0% |
| ! | TTAATTTAAACATGACCTAG+AGG | + | chr4.4:28168780-28168799 | MS.gene56074:intron | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | + | chr4.4:28169712-28169731 | MS.gene56074:intron | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | + | chr4.4:28170587-28170606 | MS.gene56074:CDS | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | + | chr4.4:28170143-28170162 | MS.gene56074:intron | 25.0% |
| !! | ATTTAGACTTAGTTTGGATT+AGG | - | chr4.4:28169038-28169057 | None:intergenic | 25.0% |
| !! | CATAAAAACTGACTTTATTG+AGG | + | chr4.4:28170551-28170570 | MS.gene56074:intron | 25.0% |
| !! | CTCTATTTATAAGCACATTT+TGG | + | chr4.4:28170401-28170420 | MS.gene56074:intron | 25.0% |
| !!! | TGAAATTTTTTACGAAGAGA+GGG | + | chr4.4:28168201-28168220 | MS.gene56074:CDS | 25.0% |
| !!! | TTGAAATTTTTTACGAAGAG+AGG | + | chr4.4:28168200-28168219 | MS.gene56074:CDS | 25.0% |
| AAAGCTAGTTGAAGTTTAGT+TGG | - | chr4.4:28170036-28170055 | None:intergenic | 30.0% | |
| AAATAACTGAACCGTAAACA+GGG | - | chr4.4:28168727-28168746 | None:intergenic | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | + | chr4.4:28169965-28169984 | MS.gene56074:CDS | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | + | chr4.4:28169419-28169438 | MS.gene56074:CDS | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | + | chr4.4:28169536-28169555 | MS.gene56074:CDS | 30.0% | |
| AATGGTTTAGAGAAGGAAAA+AGG | + | chr4.4:28167865-28167884 | MS.gene56074:CDS | 30.0% | |
| AATGTGCTTATAAATAGAGG+CGG | - | chr4.4:28170400-28170419 | None:intergenic | 30.0% | |
| ACTTTATTGAGGCAAATCAA+GGG | + | chr4.4:28170562-28170581 | MS.gene56074:intron | 30.0% | |
| ATAATAGTGAATGCTGGAAA+CGG | + | chr4.4:28169182-28169201 | MS.gene56074:CDS | 30.0% | |
| ATATCCTCTTGAGAATGTTA+GGG | + | chr4.4:28167888-28167907 | MS.gene56074:CDS | 30.0% | |
| ATATCTTTGCAAACCAAACT+TGG | + | chr4.4:28167616-28167635 | MS.gene56074:CDS | 30.0% | |
| ATATTGATGCTCAAATGTAC+AGG | + | chr4.4:28170344-28170363 | MS.gene56074:CDS | 30.0% | |
| ATGAAGAATTGGACAAGATT+AGG | + | chr4.4:28167722-28167741 | MS.gene56074:CDS | 30.0% | |
| ATTGTATTGAAGGAAAATCC+AGG | + | chr4.4:28169470-28169489 | MS.gene56074:CDS | 30.0% | |
| CACAATGTGTCAAAATATGT+AGG | - | chr4.4:28170195-28170214 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | - | chr4.4:28169763-28169782 | None:intergenic | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | + | chr4.4:28169638-28169657 | MS.gene56074:CDS | 30.0% | |
| CATTATGAAACTCCACTTAA+GGG | + | chr4.4:28168398-28168417 | MS.gene56074:CDS | 30.0% | |
| CTTATGAATCAGTAGAACTT+AGG | + | chr4.4:28169919-28169938 | MS.gene56074:CDS | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | - | chr4.4:28169691-28169710 | None:intergenic | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | - | chr4.4:28170858-28170877 | None:intergenic | 30.0% | |
| TATGATGCTTCAATAATGGT+CGG | + | chr4.4:28168060-28168079 | MS.gene56074:intron | 30.0% | |
| TGTCTATGATGCTTCAATAA+TGG | + | chr4.4:28168056-28168075 | MS.gene56074:CDS | 30.0% | |
| TGTTACTATCATTCTTTGCT+AGG | + | chr4.4:28167586-28167605 | MS.gene56074:CDS | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | + | chr4.4:28169353-28169372 | MS.gene56074:CDS | 30.0% | |
| TTGTTACATATGCCTGTATT+TGG | + | chr4.4:28168462-28168481 | MS.gene56074:intron | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | + | chr4.4:28170035-28170054 | MS.gene56074:intron | 30.0% |
| ! | ATTGAAGCATCATAGACAAA+TGG | - | chr4.4:28168054-28168073 | None:intergenic | 30.0% |
| ! | CAAAGATGTTGAGAATTTTG+CGG | - | chr4.4:28167542-28167561 | None:intergenic | 30.0% |
| ! | CTCATGAAATCAACTTTTGT+TGG | - | chr4.4:28168323-28168342 | None:intergenic | 30.0% |
| ! | TATAATTTTCACCACCATGT+AGG | - | chr4.4:28169826-28169845 | None:intergenic | 30.0% |
| ! | TGGATTTTCCTTCAATACAA+TGG | - | chr4.4:28169471-28169490 | None:intergenic | 30.0% |
| ! | TTTTTACAAAAAAGGACGGA+GGG | + | chr4.4:28170479-28170498 | MS.gene56074:intron | 30.0% |
| !! | CTAAATGCAATTTTGAAGAG+AGG | + | chr4.4:28169052-28169071 | MS.gene56074:intron | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | - | chr4.4:28169921-28169940 | None:intergenic | 30.0% |
| !! | TTTATAAGCACATTTTGGAG+AGG | + | chr4.4:28170406-28170425 | MS.gene56074:intron | 30.0% |
| !!! | AAATTTTTTACGAAGAGAGG+GGG | + | chr4.4:28168203-28168222 | MS.gene56074:CDS | 30.0% |
| !!! | CTACATATTTTGACACATTG+TGG | + | chr4.4:28170193-28170212 | MS.gene56074:intron | 30.0% |
| !!! | GAAATTTTTTACGAAGAGAG+GGG | + | chr4.4:28168202-28168221 | MS.gene56074:CDS | 30.0% |
| !!! | TTTTTTACAAAAAAGGACGG+AGG | + | chr4.4:28170478-28170497 | MS.gene56074:intron | 30.0% |
| AAAGTATGATGAAGTAGTGG+TGG | + | chr4.4:28167699-28167718 | MS.gene56074:CDS | 35.0% | |
| AACAATGAACATGGACAACA+TGG | + | chr4.4:28170596-28170615 | MS.gene56074:CDS | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | + | chr4.4:28169998-28170017 | MS.gene56074:CDS | 35.0% | |
| AAGAATTGGACAAGATTAGG+AGG | + | chr4.4:28167725-28167744 | MS.gene56074:CDS | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | - | chr4.4:28169685-28169704 | None:intergenic | 35.0% | |
| AGAAGATGAGAAACCAAGTT+TGG | - | chr4.4:28167632-28167651 | None:intergenic | 35.0% | |
| AGTGGAGTTTCATAATGCAA+AGG | - | chr4.4:28168395-28168414 | None:intergenic | 35.0% | |
| ATGAGTTTGTCACCGTTTAT+TGG | - | chr4.4:28169434-28169453 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | + | chr4.4:28169644-28169663 | MS.gene56074:CDS | 35.0% | |
| ATGCCAGCTTATGAGTTAAA+AGG | - | chr4.4:28168999-28169018 | None:intergenic | 35.0% | |
| ATGGTCGGTTACATAAAACT+TGG | + | chr4.4:28168075-28168094 | MS.gene56074:intron | 35.0% | |
| ATTTGAATACAGCGCATTAC+AGG | - | chr4.4:28169089-28169108 | None:intergenic | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | - | chr4.4:28170340-28170359 | None:intergenic | 35.0% | |
| CAAATAACTGAACCGTAAAC+AGG | - | chr4.4:28168728-28168747 | None:intergenic | 35.0% | |
| CTACAGATAATAGTGAATGC+TGG | + | chr4.4:28169176-28169195 | MS.gene56074:intron | 35.0% | |
| CTATGGTTATTTGAGTGGTT+CGG | + | chr4.4:28168620-28168639 | MS.gene56074:intron | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | - | chr4.4:28169589-28169608 | None:intergenic | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | + | chr4.4:28169677-28169696 | MS.gene56074:CDS | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | + | chr4.4:28169849-28169868 | MS.gene56074:CDS | 35.0% | |
| GACTTTATTGAGGCAAATCA+AGG | + | chr4.4:28170561-28170580 | MS.gene56074:intron | 35.0% | |
| GATATCCTCTTGAGAATGTT+AGG | + | chr4.4:28167887-28167906 | MS.gene56074:CDS | 35.0% | |
| GCATTATGAAACTCCACTTA+AGG | + | chr4.4:28168397-28168416 | MS.gene56074:CDS | 35.0% | |
| GGTTATCAATGGTTTAGAGA+AGG | + | chr4.4:28167858-28167877 | MS.gene56074:CDS | 35.0% | |
| GGTTGTATGGTGTTTGATAT+GGG | + | chr4.4:28167985-28168004 | MS.gene56074:CDS | 35.0% | |
| TAAATGAGAGAGCTTCTCAA+AGG | - | chr4.4:28168972-28168991 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | + | chr4.4:28169584-28169603 | MS.gene56074:CDS | 35.0% | |
| TGCAAAGTATGATGAAGTAG+TGG | + | chr4.4:28167696-28167715 | MS.gene56074:CDS | 35.0% | |
| TGGTTGTATGGTGTTTGATA+TGG | + | chr4.4:28167984-28168003 | MS.gene56074:CDS | 35.0% | |
| TTTATGTTGCTGTACAGGAA+GGG | + | chr4.4:28170236-28170255 | MS.gene56074:intron | 35.0% | |
| ! | AGGCAATATCAGAGAGTTTT+GGG | + | chr4.4:28167830-28167849 | MS.gene56074:CDS | 35.0% |
| ! | TCTCCTTGATGATTTCTCTT+AGG | - | chr4.4:28168361-28168380 | None:intergenic | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | + | chr4.4:28170235-28170254 | MS.gene56074:intron | 35.0% |
| !! | CTTCCTTTTAACTCATAAGC+TGG | + | chr4.4:28168993-28169012 | MS.gene56074:intron | 35.0% |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | + | chr4.4:28170231-28170250 | MS.gene56074:intron | 35.0% |
| !!! | AATTTTTTACGAAGAGAGGG+GGG | + | chr4.4:28168204-28168223 | MS.gene56074:CDS | 35.0% |
| AACCAACGCGGTATAAACAA+TGG | - | chr4.4:28169565-28169584 | None:intergenic | 40.0% | |
| AACTCCACTTAAGGGATTTC+AGG | + | chr4.4:28168406-28168425 | MS.gene56074:CDS | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | + | chr4.4:28170665-28170684 | MS.gene56074:CDS | 40.0% | |
| AAGATTAGGAGGCTTCAGAA+TGG | + | chr4.4:28167736-28167755 | MS.gene56074:CDS | 40.0% | |
| AATGTGCTCATGAAACAAGC+GGG | - | chr4.4:28168024-28168043 | None:intergenic | 40.0% | |
| AATTAGCAATGCCTGCACTA+TGG | + | chr4.4:28168603-28168622 | MS.gene56074:intron | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | + | chr4.4:28170279-28170298 | MS.gene56074:CDS | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | + | chr4.4:28169809-28169828 | MS.gene56074:intron | 40.0% | |
| ATGAACATGGACAACATGGT+TGG | + | chr4.4:28170600-28170619 | MS.gene56074:CDS | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | + | chr4.4:28169852-28169871 | MS.gene56074:CDS | 40.0% | |
| ATTGAATAGGGCATAAGGCA+AGG | - | chr4.4:28168503-28168522 | None:intergenic | 40.0% | |
| CAAACCTGAAATCCCTTAAG+TGG | - | chr4.4:28168413-28168432 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | + | chr4.4:28169601-28169620 | MS.gene56074:CDS | 40.0% | |
| CAATGTGCTCATGAAACAAG+CGG | - | chr4.4:28168025-28168044 | None:intergenic | 40.0% | |
| CACTCAAATAACCATAGTGC+AGG | - | chr4.4:28168617-28168636 | None:intergenic | 40.0% | |
| CAGTTTAACCATGACTCAGA+CGG | + | chr4.4:28168676-28168695 | MS.gene56074:intron | 40.0% | |
| CATAAGCTGGCATAAAGCAT+AGG | + | chr4.4:28169006-28169025 | MS.gene56074:intron | 40.0% | |
| CCATGAATTGACCCTGTTTA+CGG | + | chr4.4:28168713-28168732 | MS.gene56074:intron | 40.0% | |
| CCTCGAAATGCTAAAGCAAA+AGG | + | chr4.4:28169960-28169979 | MS.gene56074:CDS | 40.0% | |
| CTGCACTATGGTTATTTGAG+TGG | + | chr4.4:28168615-28168634 | MS.gene56074:intron | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | - | chr4.4:28170652-28170671 | None:intergenic | 40.0% | |
| GCACCTAAGAGAAATCATCA+AGG | + | chr4.4:28168355-28168374 | MS.gene56074:CDS | 40.0% | |
| GGAACTACGGCATTTATGAT+AGG | + | chr4.4:28168537-28168556 | MS.gene56074:intron | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | + | chr4.4:28169224-28169243 | MS.gene56074:CDS | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | + | chr4.4:28170278-28170297 | MS.gene56074:CDS | 40.0% | |
| TGAACATGGACAACATGGTT+GGG | + | chr4.4:28170601-28170620 | MS.gene56074:CDS | 40.0% | |
| TGACAAACTCATTGCTCTCA+TGG | + | chr4.4:28169442-28169461 | MS.gene56074:CDS | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | - | chr4.4:28169281-28169300 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | - | chr4.4:28170653-28170672 | None:intergenic | 40.0% | |
| TGCTTATAAATAGAGGCGGA+GGG | - | chr4.4:28170396-28170415 | None:intergenic | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | - | chr4.4:28169958-28169977 | None:intergenic | 40.0% | |
| TGTTGATACAAATGACACCC+CGG | + | chr4.4:28170318-28170337 | MS.gene56074:CDS | 40.0% | |
| TTCAAACCATTGCGTGTGTA+AGG | - | chr4.4:28168185-28168204 | None:intergenic | 40.0% | |
| TTGAATAGGGCATAAGGCAA+GGG | - | chr4.4:28168502-28168521 | None:intergenic | 40.0% | |
| TTTAAGCAGAGTAGACACTC+TGG | - | chr4.4:28168294-28168313 | None:intergenic | 40.0% | |
| TTTCCTTCTCTATGAGTCAG+TGG | - | chr4.4:28168868-28168887 | None:intergenic | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | - | chr4.4:28170339-28170358 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | - | chr4.4:28169963-28169982 | None:intergenic | 40.0% |
| ! | CTGCTTTAAACCACTAGAAC+CGG | - | chr4.4:28168659-28168678 | None:intergenic | 40.0% |
| ! | GAAGCATCATAGACAAATGG+AGG | - | chr4.4:28168051-28168070 | None:intergenic | 40.0% |
| ! | GAGGCAATATCAGAGAGTTT+TGG | + | chr4.4:28167829-28167848 | MS.gene56074:CDS | 40.0% |
| ! | GGCAATATCAGAGAGTTTTG+GGG | + | chr4.4:28167831-28167850 | MS.gene56074:CDS | 40.0% |
| ! | TGAGAATTTTGCGGAAGTAG+AGG | - | chr4.4:28167533-28167552 | None:intergenic | 40.0% |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | + | chr4.4:28170820-28170839 | MS.gene56074:intron | 40.0% |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | - | chr4.4:28169330-28169349 | None:intergenic | 40.0% |
| !! | AGTAGTGGTGGATGAAGAAT+TGG | + | chr4.4:28167711-28167730 | MS.gene56074:CDS | 40.0% |
| !! | GGGTGTCATTTGTATCAACA+AGG | - | chr4.4:28170318-28170337 | None:intergenic | 40.0% |
| AACATGGTTGGGTACACATG+AGG | + | chr4.4:28170612-28170631 | MS.gene56074:CDS | 45.0% | |
| AATTTAGACCCTGTGACTCG+AGG | - | chr4.4:28167931-28167950 | None:intergenic | 45.0% | |
| ACATGACCTAGAGGTCTCAT+TGG | + | chr4.4:28168789-28168808 | MS.gene56074:intron | 45.0% | |
| ACTCTCTGATATTGCCTCCA+CGG | - | chr4.4:28167827-28167846 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | + | chr4.4:28169604-28169623 | MS.gene56074:CDS | 45.0% | |
| ATCCAACCAATGAGACCTCT+AGG | - | chr4.4:28168798-28168817 | None:intergenic | 45.0% | |
| ATTTAGACCCTGTGACTCGA+GGG | - | chr4.4:28167930-28167949 | None:intergenic | 45.0% | |
| CACCATTGTTTATACCGCGT+TGG | + | chr4.4:28169560-28169579 | MS.gene56074:CDS | 45.0% | |
| CATGACTCAGACGGTTCAAT+CGG | + | chr4.4:28168685-28168704 | MS.gene56074:intron | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | + | chr4.4:28169460-28169479 | MS.gene56074:CDS | 45.0% | |
| CATTTGCCTTACACACGCAA+TGG | + | chr4.4:28168176-28168195 | MS.gene56074:CDS | 45.0% | |
| CCGTAAACAGGGTCAATTCA+TGG | - | chr4.4:28168716-28168735 | None:intergenic | 45.0% | |
| GACACCCTAACATTCTCAAG+AGG | - | chr4.4:28167895-28167914 | None:intergenic | 45.0% | |
| GATACCGATGTTGACAGAAG+CGG | + | chr4.4:28169386-28169405 | MS.gene56074:CDS | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | + | chr4.4:28169605-28169624 | MS.gene56074:CDS | 45.0% | |
| GGATGTTAGAGGAGTTGCAT+TGG | + | chr4.4:28167762-28167781 | MS.gene56074:CDS | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | + | chr4.4:28170290-28170309 | MS.gene56074:CDS | 45.0% | |
| GTGCTTATAAATAGAGGCGG+AGG | - | chr4.4:28170397-28170416 | None:intergenic | 45.0% | |
| GTTAGAGGAGTTGCATTGGA+AGG | + | chr4.4:28167766-28167785 | MS.gene56074:CDS | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | + | chr4.4:28169295-28169314 | MS.gene56074:CDS | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | + | chr4.4:28170248-28170267 | MS.gene56074:intron | 45.0% | |
| TAGGAGGCTTCAGAATGGTT+CGG | + | chr4.4:28167741-28167760 | MS.gene56074:CDS | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | + | chr4.4:28170682-28170701 | MS.gene56074:CDS | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | - | chr4.4:28169296-28169315 | None:intergenic | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | - | chr4.4:28169491-28169510 | None:intergenic | 45.0% | |
| TCTCTGCATCTCAAACCTGA+TGG | + | chr4.4:28169263-28169282 | MS.gene56074:CDS | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | - | chr4.4:28169577-28169596 | None:intergenic | 45.0% | |
| TGCTAAAGCAAAAGGATCGG+AGG | + | chr4.4:28169968-28169987 | MS.gene56074:CDS | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | - | chr4.4:28170338-28170357 | None:intergenic | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | + | chr4.4:28170668-28170687 | MS.gene56074:CDS | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | + | chr4.4:28169864-28169883 | MS.gene56074:CDS | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | + | chr4.4:28169865-28169884 | MS.gene56074:CDS | 45.0% |
| ! | CAGAATGGTTCGGATGTTAG+AGG | + | chr4.4:28167751-28167770 | MS.gene56074:CDS | 45.0% |
| ! | GAGAATGTTAGGGTGTCTCT+TGG | + | chr4.4:28167898-28167917 | MS.gene56074:CDS | 45.0% |
| ! | GAGCGATCACAGTTTCGTTT+TGG | + | chr4.4:28168747-28168766 | MS.gene56074:intron | 45.0% |
| ! | GCAATTTTGTCCTCGGGATT+GGG | - | chr4.4:28169308-28169327 | None:intergenic | 45.0% |
| ! | GGTCTCATTGGTTGGATGTT+CGG | + | chr4.4:28168801-28168820 | MS.gene56074:intron | 45.0% |
| ! | GTGCAGGCATTGCTAATTCA+TGG | - | chr4.4:28168601-28168620 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | - | chr4.4:28169315-28169334 | None:intergenic | 45.0% |
| ! | TTGAGTGTTGCAGTGTTTGC+CGG | + | chr4.4:28167949-28167968 | MS.gene56074:CDS | 45.0% |
| ! | TTTGAGATGCAGAGAGCCAA+AGG | - | chr4.4:28169258-28169277 | None:intergenic | 45.0% |
| !! | AAGCTTGGTGCAGATACCTT+TGG | + | chr4.4:28169239-28169258 | MS.gene56074:CDS | 45.0% |
| !! | TCTCCACTGACTCATAGAGA+AGG | + | chr4.4:28168862-28168881 | MS.gene56074:intron | 45.0% |
| !! | TGTACGAGCATCGGTTACTA+TGG | - | chr4.4:28169501-28169520 | None:intergenic | 45.0% |
| !! | TTTGGGGAGTGGGTTATCAA+TGG | + | chr4.4:28167847-28167866 | MS.gene56074:CDS | 45.0% |
| !!! | ATCAGAGAGTTTTGGGGAGT+GGG | + | chr4.4:28167837-28167856 | MS.gene56074:CDS | 45.0% |
| !!! | TATCAGAGAGTTTTGGGGAG+TGG | + | chr4.4:28167836-28167855 | MS.gene56074:CDS | 45.0% |
| AATGCTGGAAACGGTTCAGG+AGG | + | chr4.4:28169191-28169210 | MS.gene56074:CDS | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | + | chr4.4:28170239-28170258 | MS.gene56074:intron | 50.0% | |
| CGACATGCTTGTACGAGCAT+CGG | - | chr4.4:28169510-28169529 | None:intergenic | 50.0% | |
| CGATTGAACCGTCTGAGTCA+TGG | - | chr4.4:28168687-28168706 | None:intergenic | 50.0% | |
| GACCTAGAGGTCTCATTGGT+TGG | + | chr4.4:28168793-28168812 | MS.gene56074:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | + | chr4.4:28170289-28170308 | MS.gene56074:CDS | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | + | chr4.4:28169870-28169889 | MS.gene56074:CDS | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | + | chr4.4:28170247-28170266 | MS.gene56074:intron | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | + | chr4.4:28169188-28169207 | MS.gene56074:CDS | 50.0% | |
| GTTGCATTGGAAGGCGAGAA+AGG | + | chr4.4:28167775-28167794 | MS.gene56074:CDS | 50.0% | |
| TAATGAAGGGGCCTACATGG+TGG | + | chr4.4:28169812-28169831 | MS.gene56074:intron | 50.0% | |
| TCCCGAGGACAAAATTGCCA+TGG | + | chr4.4:28169310-28169329 | MS.gene56074:CDS | 50.0% | |
| ! | CACTTTCGTTCCGGTTCTAG+TGG | + | chr4.4:28168646-28168665 | MS.gene56074:intron | 50.0% |
| ! | GCCATGGCAATTTTGTCCTC+GGG | - | chr4.4:28169314-28169333 | None:intergenic | 50.0% |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | - | chr4.4:28169309-28169328 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | + | chr4.4:28169404-28169423 | MS.gene56074:CDS | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | + | chr4.4:28169405-28169424 | MS.gene56074:CDS | 50.0% |
| !! | TCTTGCTCGTGCTGGTTGTA+TGG | + | chr4.4:28167972-28167991 | MS.gene56074:CDS | 50.0% |
| ACAACCAGCACGAGCAAGAC+CGG | - | chr4.4:28167971-28167990 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | + | chr4.4:28170251-28170270 | MS.gene56074:intron | 55.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | - | chr4.4:28169393-28169412 | None:intergenic | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | + | chr4.4:28170252-28170271 | MS.gene56074:intron | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | + | chr4.4:28170268-28170287 | MS.gene56074:CDS | 55.0% | |
| GTTCGGTCGCACTTTCGTTC+CGG | + | chr4.4:28168637-28168656 | MS.gene56074:intron | 55.0% | |
| TCTGATATTGCCTCCACGGC+AGG | - | chr4.4:28167823-28167842 | None:intergenic | 55.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | + | chr4.4:28169391-28169410 | MS.gene56074:CDS | 60.0% | |
| GATATTGCCTCCACGGCAGG+AGG | - | chr4.4:28167820-28167839 | None:intergenic | 60.0% | |
| TTTGCCGGTCTTGCTCGTGC+TGG | + | chr4.4:28167964-28167983 | MS.gene56074:CDS | 60.0% | |
| CCTCCACGGCAGGAGGAGTA+AGG | - | chr4.4:28167813-28167832 | None:intergenic | 65.0% | |
| CCTTACTCCTCCTGCCGTGG+AGG | + | chr4.4:28167810-28167829 | MS.gene56074:CDS | 65.0% | |
| CGACCTTACTCCTCCTGCCG+TGG | + | chr4.4:28167807-28167826 | MS.gene56074:CDS | 65.0% | |
| GACGCGACCCTCGAGTCACA+GGG | + | chr4.4:28167920-28167939 | MS.gene56074:CDS | 65.0% | |
| ! | AGGGGGGCTGACTTCACTGG+AGG | + | chr4.4:28168220-28168239 | MS.gene56074:CDS | 65.0% |
| ! | GAGAGGGGGGCTGACTTCAC+TGG | + | chr4.4:28168217-28168236 | MS.gene56074:CDS | 65.0% |
| GGACGCGACCCTCGAGTCAC+AGG | + | chr4.4:28167919-28167938 | MS.gene56074:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 28167523 | 28170906 | 28167523 | ID=MS.gene56074 |
| chr4.4 | mRNA | 28167523 | 28170906 | 28167523 | ID=MS.gene56074.t1;Parent=MS.gene56074 |
| chr4.4 | exon | 28167523 | 28168077 | 28167523 | ID=MS.gene56074.t1.exon1;Parent=MS.gene56074.t1 |
| chr4.4 | CDS | 28167523 | 28168077 | 28167523 | ID=cds.MS.gene56074.t1;Parent=MS.gene56074.t1 |
| chr4.4 | exon | 28168164 | 28168427 | 28168164 | ID=MS.gene56074.t1.exon2;Parent=MS.gene56074.t1 |
| chr4.4 | CDS | 28168164 | 28168427 | 28168164 | ID=cds.MS.gene56074.t1;Parent=MS.gene56074.t1 |
| chr4.4 | exon | 28169182 | 28169698 | 28169182 | ID=MS.gene56074.t1.exon3;Parent=MS.gene56074.t1 |
| chr4.4 | CDS | 28169182 | 28169698 | 28169182 | ID=cds.MS.gene56074.t1;Parent=MS.gene56074.t1 |
| chr4.4 | exon | 28169820 | 28170019 | 28169820 | ID=MS.gene56074.t1.exon4;Parent=MS.gene56074.t1 |
| chr4.4 | CDS | 28169820 | 28170019 | 28169820 | ID=cds.MS.gene56074.t1;Parent=MS.gene56074.t1 |
| chr4.4 | exon | 28170253 | 28170365 | 28170253 | ID=MS.gene56074.t1.exon5;Parent=MS.gene56074.t1 |
| chr4.4 | CDS | 28170253 | 28170365 | 28170253 | ID=cds.MS.gene56074.t1;Parent=MS.gene56074.t1 |
| chr4.4 | exon | 28170583 | 28170723 | 28170583 | ID=MS.gene56074.t1.exon6;Parent=MS.gene56074.t1 |
| chr4.4 | CDS | 28170583 | 28170723 | 28170583 | ID=cds.MS.gene56074.t1;Parent=MS.gene56074.t1 |
| chr4.4 | exon | 28170825 | 28170906 | 28170825 | ID=MS.gene56074.t1.exon7;Parent=MS.gene56074.t1 |
| chr4.4 | CDS | 28170825 | 28170906 | 28170825 | ID=cds.MS.gene56074.t1;Parent=MS.gene56074.t1 |
| Gene Sequence |
| Protein sequence |
