Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071518.t1 | XP_003607905.1 | 97.3 | 623 | 15 | 1 | 1 | 623 | 1 | 621 | 0.00E+00 | 1213.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071518.t1 | Q88BD4 | 28.3 | 434 | 277 | 13 | 93 | 521 | 17 | 421 | 7.3e-38 | 160.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071518.t1 | G7JJZ2 | 97.3 | 623 | 15 | 1 | 1 | 623 | 1 | 621 | 0.0e+00 | 1213.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene071518 | -0.824933 | 6.17E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene071518 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene071518 | -0.826215 | 3.07E-54 | -1.69E-46 |
| MS.gene050811 | MS.gene071518 | -0.830498 | 2.84E-55 | -1.69E-46 |
| MS.gene05081 | MS.gene071518 | 0.835858 | 1.31E-56 | -1.69E-46 |
| MS.gene051208 | MS.gene071518 | 0.817806 | 2.72E-52 | -1.69E-46 |
| MS.gene051244 | MS.gene071518 | 0.815164 | 1.06E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene071518 | 0.845628 | 3.61E-59 | -1.69E-46 |
| MS.gene051552 | MS.gene071518 | -0.851882 | 6.64E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene071518 | 0.809965 | 1.46E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene071518 | -0.821215 | 4.55E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene071518 | 0.825284 | 5.10E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene071518 | 0.80526 | 1.45E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene071518 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene071518 | 0.802737 | 4.87E-49 | -1.69E-46 |
| MS.gene052589 | MS.gene071518 | 0.850637 | 1.49E-60 | -1.69E-46 |
| MS.gene053330 | MS.gene071518 | 0.872033 | 4.34E-67 | -1.69E-46 |
| MS.gene054102 | MS.gene071518 | 0.813384 | 2.63E-51 | -1.69E-46 |
| MS.gene054103 | MS.gene071518 | 0.806207 | 9.20E-50 | -1.69E-46 |
| MS.gene054107 | MS.gene071518 | 0.836693 | 8.06E-57 | -1.69E-46 |
| MS.gene054110 | MS.gene071518 | 0.831007 | 2.13E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene071518 | 0.860404 | 2.11E-63 | -1.69E-46 |
| MS.gene054344 | MS.gene071518 | 0.840405 | 8.87E-58 | -1.69E-46 |
| MS.gene054719 | MS.gene071518 | 0.807754 | 4.33E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene071518 | -0.828758 | 7.52E-55 | -1.69E-46 |
| MS.gene055370 | MS.gene071518 | 0.852777 | 3.69E-61 | -1.69E-46 |
| MS.gene055488 | MS.gene071518 | -0.805989 | 1.02E-49 | -1.69E-46 |
| MS.gene05556 | MS.gene071518 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene056351 | MS.gene071518 | 0.884176 | 2.40E-71 | -1.69E-46 |
| MS.gene056514 | MS.gene071518 | 0.803709 | 3.06E-49 | -1.69E-46 |
| MS.gene056633 | MS.gene071518 | 0.891835 | 2.76E-74 | -1.69E-46 |
| MS.gene056877 | MS.gene071518 | 0.850736 | 1.40E-60 | -1.69E-46 |
| MS.gene057196 | MS.gene071518 | 0.856878 | 2.39E-62 | -1.69E-46 |
| MS.gene057332 | MS.gene071518 | 0.850295 | 1.86E-60 | -1.69E-46 |
| MS.gene057658 | MS.gene071518 | 0.801505 | 8.72E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene071518 | -0.83768 | 4.51E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene071518 | 0.840152 | 1.03E-57 | -1.69E-46 |
| MS.gene058746 | MS.gene071518 | 0.87815 | 3.54E-69 | -1.69E-46 |
| MS.gene059061 | MS.gene071518 | -0.807165 | 5.77E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene071518 | 0.80951 | 1.83E-50 | -1.69E-46 |
| MS.gene059303 | MS.gene071518 | 0.825955 | 3.53E-54 | -1.69E-46 |
| MS.gene059512 | MS.gene071518 | 0.969815 | 1.11E-130 | -1.69E-46 |
| MS.gene059683 | MS.gene071518 | 0.800578 | 1.35E-48 | -1.69E-46 |
| MS.gene060087 | MS.gene071518 | -0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene071518 | 0.807196 | 5.69E-50 | -1.69E-46 |
| MS.gene061231 | MS.gene071518 | 0.820499 | 6.64E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071518 | MS.gene54796 | PPI |
| MS.gene34039 | MS.gene071518 | PPI |
| MS.gene071518 | MS.gene49437 | PPI |
| MS.gene071518 | MS.gene005970 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071518.t1 | MTR_4g084270 | 97.271 | 623 | 15 | 1 | 1 | 623 | 1 | 621 | 0.0 | 1255 |
| MS.gene071518.t1 | MTR_1g094980 | 42.908 | 557 | 273 | 12 | 73 | 617 | 18 | 541 | 1.81e-136 | 409 |
| MS.gene071518.t1 | MTR_1g094980 | 40.640 | 625 | 315 | 16 | 15 | 617 | 23 | 613 | 3.15e-135 | 409 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071518.t1 | AT1G70820 | 73.710 | 620 | 151 | 6 | 1 | 617 | 1 | 611 | 0.0 | 946 |
| MS.gene071518.t1 | AT1G70820 | 74.457 | 599 | 141 | 6 | 1 | 596 | 1 | 590 | 0.0 | 923 |
| MS.gene071518.t1 | AT5G17530 | 43.643 | 527 | 256 | 10 | 75 | 590 | 20 | 516 | 6.03e-134 | 403 |
| MS.gene071518.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene071518.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene071518.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene071518.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 52 | 555 | 2.10e-133 | 403 |
| MS.gene071518.t1 | AT5G17530 | 43.633 | 534 | 258 | 11 | 70 | 590 | 85 | 588 | 6.18e-133 | 403 |
| MS.gene071518.t1 | AT5G17530 | 44.466 | 524 | 248 | 11 | 70 | 580 | 85 | 578 | 4.28e-132 | 402 |
Find 142 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATAAGTTTGTTGAAAA+TGG | 0.159254 | 4.4:+28132005 | MS.gene071518:CDS |
| AACTCCACTTAAGGGATTTC+AGG | 0.200454 | 4.4:+28129540 | MS.gene071518:CDS |
| TCTCCTTGATGATTTCTCTT+AGG | 0.241263 | 4.4:-28129492 | None:intergenic |
| GTACAGGAAGGGAGGCTTAA+AGG | 0.243975 | 4.4:+28131381 | MS.gene071518:intron |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4.4:-28130565 | None:intergenic |
| GATATCCTCTTGAGAATGTT+AGG | 0.280295 | 4.4:+28129021 | MS.gene071518:CDS |
| GAGGCAATATCAGAGAGTTT+TGG | 0.300966 | 4.4:+28128963 | MS.gene071518:CDS |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4.4:-28130720 | None:intergenic |
| TGCAAGTTCACAGCAATGTT+TGG | 0.318198 | 4.4:-28131784 | None:intergenic |
| TGGTTGTATGGTGTTTGATA+TGG | 0.318441 | 4.4:+28129118 | MS.gene071518:CDS |
| AATGGTTTAGAGAAGGAAAA+AGG | 0.330346 | 4.4:+28128999 | MS.gene071518:CDS |
| GCATTATGAAACTCCACTTA+AGG | 0.337071 | 4.4:+28129531 | MS.gene071518:CDS |
| TGCTTTAGCATTTCGAGGTT+CGG | 0.347623 | 4.4:-28131089 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4.4:+28130487 | MS.gene071518:CDS |
| CATTATGAAACTCCACTTAA+GGG | 0.365922 | 4.4:+28129532 | MS.gene071518:CDS |
| TGTCTATGATGCTTCAATAA+TGG | 0.374026 | 4.4:+28129190 | MS.gene071518:CDS |
| CTTATTACAGATTTATTGAA+TGG | 0.379212 | 4.4:-28128789 | None:intergenic |
| TTCAAACCATTGCGTGTGTA+AGG | 0.384986 | 4.4:-28129316 | None:intergenic |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4.4:+28130322 | MS.gene071518:CDS |
| ATGAAGAATTGGACAAGATT+AGG | 0.394518 | 4.4:+28128856 | MS.gene071518:CDS |
| AGAAGATGAGAAACCAAGTT+TGG | 0.394739 | 4.4:-28128763 | None:intergenic |
| GTAATAAGTGTGAAATGTTA+TGG | 0.397911 | 4.4:+28128804 | MS.gene071518:CDS |
| GCAAGTTCACAGCAATGTTT+GGG | 0.402997 | 4.4:-28131783 | None:intergenic |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4.4:+28130811 | MS.gene071518:CDS |
| TGTACGAGCATCGGTTACTA+TGG | 0.406310 | 4.4:-28130632 | None:intergenic |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4.4:+28131412 | MS.gene071518:CDS |
| TTTGGGGAGTGGGTTATCAA+TGG | 0.408829 | 4.4:+28128981 | MS.gene071518:CDS |
| GGTTGTATGGTGTTTGATAT+GGG | 0.413997 | 4.4:+28129119 | MS.gene071518:CDS |
| TACAGGAAGGGAGGCTTAAA+GGG | 0.417177 | 4.4:+28131382 | MS.gene071518:intron |
| CATGGCTGCCATTGTATTGA+AGG | 0.421469 | 4.4:+28130594 | MS.gene071518:CDS |
| TTGAGTGTTGCAGTGTTTGC+CGG | 0.424973 | 4.4:+28129083 | MS.gene071518:CDS |
| ATATCTTTGCAAACCAAACT+TGG | 0.425190 | 4.4:+28128750 | MS.gene071518:CDS |
| TCTTGCTCGTGCTGGTTGTA+TGG | 0.433556 | 4.4:+28129106 | MS.gene071518:CDS |
| TCGGGATTGGGAATGTGATT+AGG | 0.440559 | 4.4:-28130427 | None:intergenic |
| CAGAATGGTTCGGATGTTAG+AGG | 0.441225 | 4.4:+28128885 | MS.gene071518:CDS |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4.4:+28130373 | MS.gene071518:CDS |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4.4:-28130816 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4.4:-28131052 | None:intergenic |
| AGTAGTGGTGGATGAAGAAT+TGG | 0.460522 | 4.4:+28128845 | MS.gene071518:CDS |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4.4:-28130622 | None:intergenic |
| TGTTACTATCATTCTTTGCT+AGG | 0.462385 | 4.4:+28128720 | MS.gene071518:CDS |
| CAAACCTGAAATCCCTTAAG+TGG | 0.467227 | 4.4:-28129544 | None:intergenic |
| TTTGCCGGTCTTGCTCGTGC+TGG | 0.468617 | 4.4:+28129098 | MS.gene071518:CDS |
| GGACGCGACCCTCGAGTCAC+AGG | 0.474920 | 4.4:+28129053 | MS.gene071518:CDS |
| GTTGCATTGGAAGGCGAGAA+AGG | 0.478585 | 4.4:+28128909 | MS.gene071518:CDS |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4.4:+28130553 | MS.gene071518:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4.4:-28130412 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4.4:+28131413 | MS.gene071518:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4.4:+28130772 | MS.gene071518:CDS |
| CCTCGAAATGCTAAAGCAAA+AGG | 0.489207 | 4.4:+28131094 | MS.gene071518:CDS |
| CCTCCACGGCAGGAGGAGTA+AGG | 0.491033 | 4.4:-28128944 | None:intergenic |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4.4:+28130967 | MS.gene071518:CDS |
| TCTGATATTGCCTCCACGGC+AGG | 0.494254 | 4.4:-28128954 | None:intergenic |
| ACTAAGTTTATAACTGATAG+AGG | 0.494389 | 4.4:+28130667 | MS.gene071518:CDS |
| CTTATGAATCAGTAGAACTT+AGG | 0.496088 | 4.4:+28131053 | MS.gene071518:CDS |
| TATCAATTTGAGCAATGTCT+AGG | 0.498567 | 4.4:-28131989 | None:intergenic |
| TAGGAGGCTTCAGAATGGTT+CGG | 0.500282 | 4.4:+28128875 | MS.gene071518:CDS |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4.4:+28131424 | MS.gene071518:CDS |
| TCAAGGAGGTTGCTTGTCAA+TGG | 0.508461 | 4.4:+28131816 | MS.gene071518:CDS |
| TGAACATGGACAACATGGTT+GGG | 0.514106 | 4.4:+28131735 | MS.gene071518:CDS |
| ATGAACATGGACAACATGGT+TGG | 0.518204 | 4.4:+28131734 | MS.gene071518:CDS |
| GAGAATGTTAGGGTGTCTCT+TGG | 0.518716 | 4.4:+28129032 | MS.gene071518:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4.4:+28130998 | MS.gene071518:CDS |
| ATTGAAGCATCATAGACAAA+TGG | 0.520839 | 4.4:-28129185 | None:intergenic |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4.4:+28130310 | MS.gene071518:intron |
| TCGTAAATATGCAAATAGAT+TGG | 0.522642 | 4.4:+28129402 | MS.gene071518:CDS |
| ATATTGATGCTCAAATGTAC+AGG | 0.524473 | 4.4:+28131478 | MS.gene071518:CDS |
| TGACAAACTCATTGCTCTCA+TGG | 0.524707 | 4.4:+28130576 | MS.gene071518:CDS |
| ATATAATGAAGGGGCCTACA+TGG | 0.525333 | 4.4:+28130943 | MS.gene071518:intron |
| TTTGAGCATCAATATGAGCC+GGG | 0.527926 | 4.4:-28131470 | None:intergenic |
| CATATTGTAAATCAGGCTGA+TGG | 0.528700 | 4.4:-28132029 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4.4:+28131423 | MS.gene071518:CDS |
| ATTTGAGCATCAATATGAGC+CGG | 0.540769 | 4.4:-28131471 | None:intergenic |
| ATATCCTCTTGAGAATGTTA+GGG | 0.543188 | 4.4:+28129022 | MS.gene071518:CDS |
| ACAACCAGCACGAGCAAGAC+CGG | 0.545469 | 4.4:-28129102 | None:intergenic |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4.4:+28130316 | MS.gene071518:CDS |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4.4:-28130389 | None:intergenic |
| ATTGTATTGAAGGAAAATCC+AGG | 0.558299 | 4.4:+28130604 | MS.gene071518:CDS |
| CACCATTGTTTATACCGCGT+TGG | 0.558868 | 4.4:+28130694 | MS.gene071518:CDS |
| AACAATGAACATGGACAACA+TGG | 0.562336 | 4.4:+28131730 | MS.gene071518:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4.4:-28130822 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4.4:+28131004 | MS.gene071518:CDS |
| CGACCTTACTCCTCCTGCCG+TGG | 0.566388 | 4.4:+28128941 | MS.gene071518:CDS |
| GGTTATCAATGGTTTAGAGA+AGG | 0.568136 | 4.4:+28128992 | MS.gene071518:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4.4:+28130358 | MS.gene071518:CDS |
| CATTTGCCTTACACACGCAA+TGG | 0.572460 | 4.4:+28129310 | MS.gene071518:CDS |
| GGATGTTAGAGGAGTTGCAT+TGG | 0.576031 | 4.4:+28128896 | MS.gene071518:CDS |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4.4:+28130539 | MS.gene071518:CDS |
| ATTTAGACCCTGTGACTCGA+GGG | 0.578792 | 4.4:-28129061 | None:intergenic |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.582640 | 4.4:+28130735 | MS.gene071518:CDS |
| CCTTACTCCTCCTGCCGTGG+AGG | 0.582653 | 4.4:+28128944 | MS.gene071518:CDS |
| AACTTGCAATCATCTGCTCA+AGG | 0.583771 | 4.4:+28131799 | MS.gene071518:CDS |
| GTTAGAGGAGTTGCATTGGA+AGG | 0.585950 | 4.4:+28128900 | MS.gene071518:CDS |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4.4:+28130397 | MS.gene071518:CDS |
| AGTGGAGTTTCATAATGCAA+AGG | 0.592830 | 4.4:-28129526 | None:intergenic |
| ATATTGTAAATCAGGCTGAT+GGG | 0.593285 | 4.4:-28132028 | None:intergenic |
| ATGTTGCTGTACAGGAAGGG+AGG | 0.593434 | 4.4:+28131373 | MS.gene071518:intron |
| AAGAATTGGACAAGATTAGG+AGG | 0.597154 | 4.4:+28128859 | MS.gene071518:CDS |
| GATATTGCCTCCACGGCAGG+AGG | 0.597822 | 4.4:-28128951 | None:intergenic |
| AAGATTAGGAGGCTTCAGAA+TGG | 0.602089 | 4.4:+28128870 | MS.gene071518:CDS |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4.4:+28130986 | MS.gene071518:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4.4:+28130983 | MS.gene071518:CDS |
| ACTCTCTGATATTGCCTCCA+CGG | 0.605057 | 4.4:-28128958 | None:intergenic |
| TCCCGAGGACAAAATTGCCA+TGG | 0.605099 | 4.4:+28130444 | MS.gene071518:CDS |
| GGAAGGGAGGCTTAAAGGGT+GGG | 0.606977 | 4.4:+28131386 | MS.gene071518:intron |
| GACGCGACCCTCGAGTCACA+GGG | 0.611240 | 4.4:+28129054 | MS.gene071518:CDS |
| GATACCGATGTTGACAGAAG+CGG | 0.611913 | 4.4:+28130520 | MS.gene071518:CDS |
| AATTTAGACCCTGTGACTCG+AGG | 0.613432 | 4.4:-28129062 | None:intergenic |
| AATGTGCTCATGAAACAAGC+GGG | 0.613902 | 4.4:-28129155 | None:intergenic |
| AAATGCTAAAGCAAAAGGAT+CGG | 0.620165 | 4.4:+28131099 | MS.gene071518:CDS |
| GAAGCATCATAGACAAATGG+AGG | 0.622415 | 4.4:-28129182 | None:intergenic |
| TGCTAAAGCAAAAGGATCGG+AGG | 0.622933 | 4.4:+28131102 | MS.gene071518:CDS |
| GGAGTTCAGCTTAACAAGGA+GGG | 0.622995 | 4.4:+28130739 | MS.gene071518:CDS |
| CAATGTGCTCATGAAACAAG+CGG | 0.623267 | 4.4:-28129156 | None:intergenic |
| GACACCCTAACATTCTCAAG+AGG | 0.625174 | 4.4:-28129026 | None:intergenic |
| CGACATGCTTGTACGAGCAT+CGG | 0.627032 | 4.4:-28130641 | None:intergenic |
| AGGAAGGGAGGCTTAAAGGG+TGG | 0.627499 | 4.4:+28131385 | MS.gene071518:intron |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4.4:+28130538 | MS.gene071518:CDS |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4.4:+28130999 | MS.gene071518:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4.4:+28130325 | MS.gene071518:CDS |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4.4:+28130718 | MS.gene071518:CDS |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4.4:+28130778 | MS.gene071518:CDS |
| TGCAAAGTATGATGAAGTAG+TGG | 0.641435 | 4.4:+28128830 | MS.gene071518:CDS |
| AACATGGTTGGGTACACATG+AGG | 0.643450 | 4.4:+28131746 | MS.gene071518:CDS |
| AAAGTATCAAACAATGAACA+TGG | 0.643511 | 4.4:+28131721 | MS.gene071518:CDS |
| GCACCTAAGAGAAATCATCA+AGG | 0.645515 | 4.4:+28129489 | MS.gene071518:CDS |
| AACCAACGCGGTATAAACAA+TGG | 0.648208 | 4.4:-28130696 | None:intergenic |
| TTTAAGCAGAGTAGACACTC+TGG | 0.648407 | 4.4:-28129425 | None:intergenic |
| GGGTGGGAGTTAGACTCATG+TGG | 0.663424 | 4.4:+28131402 | MS.gene071518:CDS |
| GGGTGTCATTTGTATCAACA+AGG | 0.663565 | 4.4:-28131449 | None:intergenic |
| AGGAGTTCAGCTTAACAAGG+AGG | 0.668823 | 4.4:+28130738 | MS.gene071518:CDS |
| CGATGTTGACAGAAGCGGCG+TGG | 0.670101 | 4.4:+28130525 | MS.gene071518:CDS |
| TTGAGCATCAATATGAGCCG+GGG | 0.674597 | 4.4:-28131469 | None:intergenic |
| TAATGAAGGGGCCTACATGG+TGG | 0.680927 | 4.4:+28130946 | MS.gene071518:intron |
| TGTTGATACAAATGACACCC+CGG | 0.681662 | 4.4:+28131452 | MS.gene071518:CDS |
| AAAGTATGATGAAGTAGTGG+TGG | 0.692926 | 4.4:+28128833 | MS.gene071518:CDS |
| TAATCACATTCCCAATCCCG+AGG | 0.693986 | 4.4:+28130429 | MS.gene071518:CDS |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4.4:+28130670 | MS.gene071518:CDS |
| TTGCAATCATCTGCTCAAGG+AGG | 0.704569 | 4.4:+28131802 | MS.gene071518:CDS |
| TGACATTTCGGTAACCAACG+CGG | 0.705467 | 4.4:-28130708 | None:intergenic |
| CACGCCGCTTCTGTCAACAT+CGG | 0.714678 | 4.4:-28130524 | None:intergenic |
| AACATTTCGAAACTACATCG+AGG | 0.755001 | 4.4:+28131132 | MS.gene071518:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTATTTTTTACAAAAA+AGG | + | chr4.4:28131605-28131624 | MS.gene071518:intron | 10.0% |
| !! | AAGATCTTAATATATTGAAT+AGG | - | chr4.4:28129650-28129669 | None:intergenic | 15.0% |
| !! | AGATCTTAATATATTGAATA+GGG | - | chr4.4:28129649-28129668 | None:intergenic | 15.0% |
| !! | ATTCAATATATTAAGATCTT+AGG | + | chr4.4:28129650-28129669 | MS.gene071518:intron | 15.0% |
| !! | TGAAAAAATCCTTATATTTA+AGG | - | chr4.4:28131574-28131593 | None:intergenic | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | - | chr4.4:28131938-28131957 | None:intergenic | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | + | chr4.4:28130933-28130952 | MS.gene071518:intron | 15.0% |
| !! | TTTCTGTATATATATAATGA+AGG | + | chr4.4:28130932-28130951 | MS.gene071518:intron | 15.0% |
| !!! | AAATTTTCAAAGAAAATAGA+GGG | - | chr4.4:28130257-28130276 | None:intergenic | 15.0% |
| !!! | TAAATTTTCAAAGAAAATAG+AGG | - | chr4.4:28130258-28130277 | None:intergenic | 15.0% |
| !!! | TTATTTTTTACAAAAAAGGA+CGG | + | chr4.4:28131609-28131628 | MS.gene071518:intron | 15.0% |
| !! | CTTATTACAGATTTATTGAA+TGG | - | chr4.4:28128792-28128811 | None:intergenic | 20.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | + | chr4.4:28131562-28131581 | MS.gene071518:intron | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | + | chr4.4:28130967-28130986 | MS.gene071518:CDS | 20.0% |
| !! | TACACGTATATAAAAAATTG+TGG | - | chr4.4:28131244-28131263 | None:intergenic | 20.0% |
| !! | TCTGTATATATATAATGAAG+GGG | + | chr4.4:28130934-28130953 | MS.gene071518:intron | 20.0% |
| !!! | ATTATGTATAGTACTTTTGA+AGG | - | chr4.4:28129236-28129255 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | + | chr4.4:28132005-28132024 | MS.gene071518:CDS | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | - | chr4.4:28131877-28131896 | None:intergenic | 20.0% |
| ! | AATATATTGAATAGGGCATA+AGG | - | chr4.4:28129642-28129661 | None:intergenic | 25.0% |
| ! | AATTGCATTTAGACTTAGTT+TGG | - | chr4.4:28130178-28130197 | None:intergenic | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | + | chr4.4:28131341-28131360 | MS.gene071518:intron | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | + | chr4.4:28130667-28130686 | MS.gene071518:CDS | 25.0% |
| ! | ACTAGTTAAACTGTTCAATT+CGG | - | chr4.4:28129708-28129727 | None:intergenic | 25.0% |
| ! | ATTTAGAAGATACCAAATAC+AGG | - | chr4.4:28129611-28129630 | None:intergenic | 25.0% |
| ! | CAAAATGTGCTTATAAATAG+AGG | - | chr4.4:28131537-28131556 | None:intergenic | 25.0% |
| ! | GTAATAAGTGTGAAATGTTA+TGG | + | chr4.4:28128804-28128823 | MS.gene071518:CDS | 25.0% |
| ! | GTTATTTATTCAACAGATGA+CGG | + | chr4.4:28129282-28129301 | MS.gene071518:intron | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | - | chr4.4:28131914-28131933 | None:intergenic | 25.0% |
| ! | TATTAAGATCTTAGGAACTA+CGG | + | chr4.4:28129658-28129677 | MS.gene071518:intron | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | + | chr4.4:28131899-28131918 | MS.gene071518:intron | 25.0% |
| ! | TCGTAAATATGCAAATAGAT+TGG | + | chr4.4:28129402-28129421 | MS.gene071518:CDS | 25.0% |
| ! | TTAATTTAAACATGACCTAG+AGG | + | chr4.4:28129914-28129933 | MS.gene071518:intron | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | + | chr4.4:28130846-28130865 | MS.gene071518:intron | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | + | chr4.4:28131721-28131740 | MS.gene071518:CDS | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | + | chr4.4:28131277-28131296 | MS.gene071518:intron | 25.0% |
| !! | ATTTAGACTTAGTTTGGATT+AGG | - | chr4.4:28130172-28130191 | None:intergenic | 25.0% |
| !! | CATAAAAACTGACTTTATTG+AGG | + | chr4.4:28131685-28131704 | MS.gene071518:intron | 25.0% |
| !! | CTCTATTTATAAGCACATTT+TGG | + | chr4.4:28131535-28131554 | MS.gene071518:intron | 25.0% |
| !!! | TGAAATTTTTTACGAAGAGA+GGG | + | chr4.4:28129335-28129354 | MS.gene071518:CDS | 25.0% |
| !!! | TTGAAATTTTTTACGAAGAG+AGG | + | chr4.4:28129334-28129353 | MS.gene071518:CDS | 25.0% |
| AAAGCTAGTTGAAGTTTAGT+TGG | - | chr4.4:28131170-28131189 | None:intergenic | 30.0% | |
| AAATAACTGAACCGTAAACA+GGG | - | chr4.4:28129861-28129880 | None:intergenic | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | + | chr4.4:28131099-28131118 | MS.gene071518:CDS | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | + | chr4.4:28130553-28130572 | MS.gene071518:CDS | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | + | chr4.4:28130670-28130689 | MS.gene071518:CDS | 30.0% | |
| AATGGTTTAGAGAAGGAAAA+AGG | + | chr4.4:28128999-28129018 | MS.gene071518:CDS | 30.0% | |
| AATGTGCTTATAAATAGAGG+CGG | - | chr4.4:28131534-28131553 | None:intergenic | 30.0% | |
| ACTTTATTGAGGCAAATCAA+GGG | + | chr4.4:28131696-28131715 | MS.gene071518:intron | 30.0% | |
| ATAATAGTGAATGCTGGAAA+CGG | + | chr4.4:28130316-28130335 | MS.gene071518:CDS | 30.0% | |
| ATATCCTCTTGAGAATGTTA+GGG | + | chr4.4:28129022-28129041 | MS.gene071518:CDS | 30.0% | |
| ATATCTTTGCAAACCAAACT+TGG | + | chr4.4:28128750-28128769 | MS.gene071518:CDS | 30.0% | |
| ATATTGATGCTCAAATGTAC+AGG | + | chr4.4:28131478-28131497 | MS.gene071518:CDS | 30.0% | |
| ATGAAGAATTGGACAAGATT+AGG | + | chr4.4:28128856-28128875 | MS.gene071518:CDS | 30.0% | |
| ATTGTATTGAAGGAAAATCC+AGG | + | chr4.4:28130604-28130623 | MS.gene071518:CDS | 30.0% | |
| CACAATGTGTCAAAATATGT+AGG | - | chr4.4:28131329-28131348 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | - | chr4.4:28130897-28130916 | None:intergenic | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | + | chr4.4:28130772-28130791 | MS.gene071518:CDS | 30.0% | |
| CATTATGAAACTCCACTTAA+GGG | + | chr4.4:28129532-28129551 | MS.gene071518:CDS | 30.0% | |
| CTTATGAATCAGTAGAACTT+AGG | + | chr4.4:28131053-28131072 | MS.gene071518:CDS | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | - | chr4.4:28130825-28130844 | None:intergenic | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | - | chr4.4:28131992-28132011 | None:intergenic | 30.0% | |
| TATGATGCTTCAATAATGGT+CGG | + | chr4.4:28129194-28129213 | MS.gene071518:intron | 30.0% | |
| TGTCTATGATGCTTCAATAA+TGG | + | chr4.4:28129190-28129209 | MS.gene071518:CDS | 30.0% | |
| TGTTACTATCATTCTTTGCT+AGG | + | chr4.4:28128720-28128739 | MS.gene071518:CDS | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | + | chr4.4:28130487-28130506 | MS.gene071518:CDS | 30.0% | |
| TTGTTACATATGCCTGTATT+TGG | + | chr4.4:28129596-28129615 | MS.gene071518:intron | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | + | chr4.4:28131169-28131188 | MS.gene071518:intron | 30.0% |
| ! | ATTGAAGCATCATAGACAAA+TGG | - | chr4.4:28129188-28129207 | None:intergenic | 30.0% |
| ! | CAAAGATGTTGAGAATTTTG+CGG | - | chr4.4:28128676-28128695 | None:intergenic | 30.0% |
| ! | CTCATGAAATCAACTTTTGT+TGG | - | chr4.4:28129457-28129476 | None:intergenic | 30.0% |
| ! | TATAATTTTCACCACCATGT+AGG | - | chr4.4:28130960-28130979 | None:intergenic | 30.0% |
| ! | TGGATTTTCCTTCAATACAA+TGG | - | chr4.4:28130605-28130624 | None:intergenic | 30.0% |
| ! | TTTTTACAAAAAAGGACGGA+GGG | + | chr4.4:28131613-28131632 | MS.gene071518:intron | 30.0% |
| !! | CTAAATGCAATTTTGAAGAG+AGG | + | chr4.4:28130186-28130205 | MS.gene071518:intron | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | - | chr4.4:28131055-28131074 | None:intergenic | 30.0% |
| !! | TTTATAAGCACATTTTGGAG+AGG | + | chr4.4:28131540-28131559 | MS.gene071518:intron | 30.0% |
| !!! | AAATTTTTTACGAAGAGAGG+GGG | + | chr4.4:28129337-28129356 | MS.gene071518:CDS | 30.0% |
| !!! | CTACATATTTTGACACATTG+TGG | + | chr4.4:28131327-28131346 | MS.gene071518:intron | 30.0% |
| !!! | GAAATTTTTTACGAAGAGAG+GGG | + | chr4.4:28129336-28129355 | MS.gene071518:CDS | 30.0% |
| !!! | TTTTTTACAAAAAAGGACGG+AGG | + | chr4.4:28131612-28131631 | MS.gene071518:intron | 30.0% |
| AAAGTATGATGAAGTAGTGG+TGG | + | chr4.4:28128833-28128852 | MS.gene071518:CDS | 35.0% | |
| AACAATGAACATGGACAACA+TGG | + | chr4.4:28131730-28131749 | MS.gene071518:CDS | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | + | chr4.4:28131132-28131151 | MS.gene071518:CDS | 35.0% | |
| AAGAATTGGACAAGATTAGG+AGG | + | chr4.4:28128859-28128878 | MS.gene071518:CDS | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | - | chr4.4:28130819-28130838 | None:intergenic | 35.0% | |
| AGAAGATGAGAAACCAAGTT+TGG | - | chr4.4:28128766-28128785 | None:intergenic | 35.0% | |
| AGTGGAGTTTCATAATGCAA+AGG | - | chr4.4:28129529-28129548 | None:intergenic | 35.0% | |
| ATGAGTTTGTCACCGTTTAT+TGG | - | chr4.4:28130568-28130587 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | + | chr4.4:28130778-28130797 | MS.gene071518:CDS | 35.0% | |
| ATGCCAGCTTATGAGTTAAA+AGG | - | chr4.4:28130133-28130152 | None:intergenic | 35.0% | |
| ATGGTCGGTTACATAAAACT+TGG | + | chr4.4:28129209-28129228 | MS.gene071518:intron | 35.0% | |
| ATTTGAATACAGCGCATTAC+AGG | - | chr4.4:28130223-28130242 | None:intergenic | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | - | chr4.4:28131474-28131493 | None:intergenic | 35.0% | |
| CAAATAACTGAACCGTAAAC+AGG | - | chr4.4:28129862-28129881 | None:intergenic | 35.0% | |
| CTACAGATAATAGTGAATGC+TGG | + | chr4.4:28130310-28130329 | MS.gene071518:intron | 35.0% | |
| CTATGGTTATTTGAGTGGTT+CGG | + | chr4.4:28129754-28129773 | MS.gene071518:intron | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | - | chr4.4:28130723-28130742 | None:intergenic | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | + | chr4.4:28130811-28130830 | MS.gene071518:CDS | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | + | chr4.4:28130983-28131002 | MS.gene071518:CDS | 35.0% | |
| GACTTTATTGAGGCAAATCA+AGG | + | chr4.4:28131695-28131714 | MS.gene071518:intron | 35.0% | |
| GATATCCTCTTGAGAATGTT+AGG | + | chr4.4:28129021-28129040 | MS.gene071518:CDS | 35.0% | |
| GCATTATGAAACTCCACTTA+AGG | + | chr4.4:28129531-28129550 | MS.gene071518:CDS | 35.0% | |
| GGTTATCAATGGTTTAGAGA+AGG | + | chr4.4:28128992-28129011 | MS.gene071518:CDS | 35.0% | |
| GGTTGTATGGTGTTTGATAT+GGG | + | chr4.4:28129119-28129138 | MS.gene071518:CDS | 35.0% | |
| TAAATGAGAGAGCTTCTCAA+AGG | - | chr4.4:28130106-28130125 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | + | chr4.4:28130718-28130737 | MS.gene071518:CDS | 35.0% | |
| TGCAAAGTATGATGAAGTAG+TGG | + | chr4.4:28128830-28128849 | MS.gene071518:CDS | 35.0% | |
| TGGTTGTATGGTGTTTGATA+TGG | + | chr4.4:28129118-28129137 | MS.gene071518:CDS | 35.0% | |
| TTTATGTTGCTGTACAGGAA+GGG | + | chr4.4:28131370-28131389 | MS.gene071518:intron | 35.0% | |
| ! | AGGCAATATCAGAGAGTTTT+GGG | + | chr4.4:28128964-28128983 | MS.gene071518:CDS | 35.0% |
| ! | TCTCCTTGATGATTTCTCTT+AGG | - | chr4.4:28129495-28129514 | None:intergenic | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | + | chr4.4:28131369-28131388 | MS.gene071518:intron | 35.0% |
| !! | CTTCCTTTTAACTCATAAGC+TGG | + | chr4.4:28130127-28130146 | MS.gene071518:intron | 35.0% |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | + | chr4.4:28131365-28131384 | MS.gene071518:intron | 35.0% |
| !!! | AATTTTTTACGAAGAGAGGG+GGG | + | chr4.4:28129338-28129357 | MS.gene071518:CDS | 35.0% |
| AACCAACGCGGTATAAACAA+TGG | - | chr4.4:28130699-28130718 | None:intergenic | 40.0% | |
| AACTCCACTTAAGGGATTTC+AGG | + | chr4.4:28129540-28129559 | MS.gene071518:CDS | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | + | chr4.4:28131799-28131818 | MS.gene071518:CDS | 40.0% | |
| AAGATTAGGAGGCTTCAGAA+TGG | + | chr4.4:28128870-28128889 | MS.gene071518:CDS | 40.0% | |
| AATGTGCTCATGAAACAAGC+GGG | - | chr4.4:28129158-28129177 | None:intergenic | 40.0% | |
| AATTAGCAATGCCTGCACTA+TGG | + | chr4.4:28129737-28129756 | MS.gene071518:intron | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | + | chr4.4:28131413-28131432 | MS.gene071518:CDS | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | + | chr4.4:28130943-28130962 | MS.gene071518:intron | 40.0% | |
| ATGAACATGGACAACATGGT+TGG | + | chr4.4:28131734-28131753 | MS.gene071518:CDS | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | + | chr4.4:28130986-28131005 | MS.gene071518:CDS | 40.0% | |
| ATTGAATAGGGCATAAGGCA+AGG | - | chr4.4:28129637-28129656 | None:intergenic | 40.0% | |
| CAAACCTGAAATCCCTTAAG+TGG | - | chr4.4:28129547-28129566 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | + | chr4.4:28130735-28130754 | MS.gene071518:CDS | 40.0% | |
| CAATGTGCTCATGAAACAAG+CGG | - | chr4.4:28129159-28129178 | None:intergenic | 40.0% | |
| CACTCAAATAACCATAGTGC+AGG | - | chr4.4:28129751-28129770 | None:intergenic | 40.0% | |
| CAGTTTAACCATGACTCAGA+CGG | + | chr4.4:28129810-28129829 | MS.gene071518:intron | 40.0% | |
| CATAAGCTGGCATAAAGCAT+AGG | + | chr4.4:28130140-28130159 | MS.gene071518:intron | 40.0% | |
| CCATGAATTGACCCTGTTTA+CGG | + | chr4.4:28129847-28129866 | MS.gene071518:intron | 40.0% | |
| CCTCGAAATGCTAAAGCAAA+AGG | + | chr4.4:28131094-28131113 | MS.gene071518:CDS | 40.0% | |
| CTGCACTATGGTTATTTGAG+TGG | + | chr4.4:28129749-28129768 | MS.gene071518:intron | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | - | chr4.4:28131786-28131805 | None:intergenic | 40.0% | |
| GCACCTAAGAGAAATCATCA+AGG | + | chr4.4:28129489-28129508 | MS.gene071518:CDS | 40.0% | |
| GGAACTACGGCATTTATGAT+AGG | + | chr4.4:28129671-28129690 | MS.gene071518:intron | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | + | chr4.4:28130358-28130377 | MS.gene071518:CDS | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | + | chr4.4:28131412-28131431 | MS.gene071518:CDS | 40.0% | |
| TGAACATGGACAACATGGTT+GGG | + | chr4.4:28131735-28131754 | MS.gene071518:CDS | 40.0% | |
| TGACAAACTCATTGCTCTCA+TGG | + | chr4.4:28130576-28130595 | MS.gene071518:CDS | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | - | chr4.4:28130415-28130434 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | - | chr4.4:28131787-28131806 | None:intergenic | 40.0% | |
| TGCTTATAAATAGAGGCGGA+GGG | - | chr4.4:28131530-28131549 | None:intergenic | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | - | chr4.4:28131092-28131111 | None:intergenic | 40.0% | |
| TGTTGATACAAATGACACCC+CGG | + | chr4.4:28131452-28131471 | MS.gene071518:CDS | 40.0% | |
| TTCAAACCATTGCGTGTGTA+AGG | - | chr4.4:28129319-28129338 | None:intergenic | 40.0% | |
| TTGAATAGGGCATAAGGCAA+GGG | - | chr4.4:28129636-28129655 | None:intergenic | 40.0% | |
| TTTAAGCAGAGTAGACACTC+TGG | - | chr4.4:28129428-28129447 | None:intergenic | 40.0% | |
| TTTCCTTCTCTATGAGTCAG+TGG | - | chr4.4:28130002-28130021 | None:intergenic | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | - | chr4.4:28131473-28131492 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | - | chr4.4:28131097-28131116 | None:intergenic | 40.0% |
| ! | CTGCTTTAAACCACTAGAAC+CGG | - | chr4.4:28129793-28129812 | None:intergenic | 40.0% |
| ! | GAAGCATCATAGACAAATGG+AGG | - | chr4.4:28129185-28129204 | None:intergenic | 40.0% |
| ! | GAGGCAATATCAGAGAGTTT+TGG | + | chr4.4:28128963-28128982 | MS.gene071518:CDS | 40.0% |
| ! | GGCAATATCAGAGAGTTTTG+GGG | + | chr4.4:28128965-28128984 | MS.gene071518:CDS | 40.0% |
| ! | TGAGAATTTTGCGGAAGTAG+AGG | - | chr4.4:28128667-28128686 | None:intergenic | 40.0% |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | + | chr4.4:28131954-28131973 | MS.gene071518:intron | 40.0% |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | - | chr4.4:28130464-28130483 | None:intergenic | 40.0% |
| !! | AGTAGTGGTGGATGAAGAAT+TGG | + | chr4.4:28128845-28128864 | MS.gene071518:CDS | 40.0% |
| !! | GGGTGTCATTTGTATCAACA+AGG | - | chr4.4:28131452-28131471 | None:intergenic | 40.0% |
| AACATGGTTGGGTACACATG+AGG | + | chr4.4:28131746-28131765 | MS.gene071518:CDS | 45.0% | |
| AATTTAGACCCTGTGACTCG+AGG | - | chr4.4:28129065-28129084 | None:intergenic | 45.0% | |
| ACATGACCTAGAGGTCTCAT+TGG | + | chr4.4:28129923-28129942 | MS.gene071518:intron | 45.0% | |
| ACTCTCTGATATTGCCTCCA+CGG | - | chr4.4:28128961-28128980 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | + | chr4.4:28130738-28130757 | MS.gene071518:CDS | 45.0% | |
| ATCCAACCAATGAGACCTCT+AGG | - | chr4.4:28129932-28129951 | None:intergenic | 45.0% | |
| ATTTAGACCCTGTGACTCGA+GGG | - | chr4.4:28129064-28129083 | None:intergenic | 45.0% | |
| CACCATTGTTTATACCGCGT+TGG | + | chr4.4:28130694-28130713 | MS.gene071518:CDS | 45.0% | |
| CATGACTCAGACGGTTCAAT+CGG | + | chr4.4:28129819-28129838 | MS.gene071518:intron | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | + | chr4.4:28130594-28130613 | MS.gene071518:CDS | 45.0% | |
| CATTTGCCTTACACACGCAA+TGG | + | chr4.4:28129310-28129329 | MS.gene071518:CDS | 45.0% | |
| CCGTAAACAGGGTCAATTCA+TGG | - | chr4.4:28129850-28129869 | None:intergenic | 45.0% | |
| GACACCCTAACATTCTCAAG+AGG | - | chr4.4:28129029-28129048 | None:intergenic | 45.0% | |
| GATACCGATGTTGACAGAAG+CGG | + | chr4.4:28130520-28130539 | MS.gene071518:CDS | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | + | chr4.4:28130739-28130758 | MS.gene071518:CDS | 45.0% | |
| GGATGTTAGAGGAGTTGCAT+TGG | + | chr4.4:28128896-28128915 | MS.gene071518:CDS | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | + | chr4.4:28131424-28131443 | MS.gene071518:CDS | 45.0% | |
| GTGCTTATAAATAGAGGCGG+AGG | - | chr4.4:28131531-28131550 | None:intergenic | 45.0% | |
| GTTAGAGGAGTTGCATTGGA+AGG | + | chr4.4:28128900-28128919 | MS.gene071518:CDS | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | + | chr4.4:28130429-28130448 | MS.gene071518:CDS | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | + | chr4.4:28131382-28131401 | MS.gene071518:intron | 45.0% | |
| TAGGAGGCTTCAGAATGGTT+CGG | + | chr4.4:28128875-28128894 | MS.gene071518:CDS | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | + | chr4.4:28131816-28131835 | MS.gene071518:CDS | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | - | chr4.4:28130430-28130449 | None:intergenic | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | - | chr4.4:28130625-28130644 | None:intergenic | 45.0% | |
| TCTCTGCATCTCAAACCTGA+TGG | + | chr4.4:28130397-28130416 | MS.gene071518:CDS | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | - | chr4.4:28130711-28130730 | None:intergenic | 45.0% | |
| TGCTAAAGCAAAAGGATCGG+AGG | + | chr4.4:28131102-28131121 | MS.gene071518:CDS | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | - | chr4.4:28131472-28131491 | None:intergenic | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | + | chr4.4:28131802-28131821 | MS.gene071518:CDS | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | + | chr4.4:28130998-28131017 | MS.gene071518:CDS | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | + | chr4.4:28130999-28131018 | MS.gene071518:CDS | 45.0% |
| ! | CAGAATGGTTCGGATGTTAG+AGG | + | chr4.4:28128885-28128904 | MS.gene071518:CDS | 45.0% |
| ! | GAGAATGTTAGGGTGTCTCT+TGG | + | chr4.4:28129032-28129051 | MS.gene071518:CDS | 45.0% |
| ! | GAGCGATCACAGTTTCGTTT+TGG | + | chr4.4:28129881-28129900 | MS.gene071518:intron | 45.0% |
| ! | GCAATTTTGTCCTCGGGATT+GGG | - | chr4.4:28130442-28130461 | None:intergenic | 45.0% |
| ! | GGTCTCATTGGTTGGATGTT+CGG | + | chr4.4:28129935-28129954 | MS.gene071518:intron | 45.0% |
| ! | GTGCAGGCATTGCTAATTCA+TGG | - | chr4.4:28129735-28129754 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | - | chr4.4:28130449-28130468 | None:intergenic | 45.0% |
| ! | TTGAGTGTTGCAGTGTTTGC+CGG | + | chr4.4:28129083-28129102 | MS.gene071518:CDS | 45.0% |
| ! | TTTGAGATGCAGAGAGCCAA+AGG | - | chr4.4:28130392-28130411 | None:intergenic | 45.0% |
| !! | AAGCTTGGTGCAGATACCTT+TGG | + | chr4.4:28130373-28130392 | MS.gene071518:CDS | 45.0% |
| !! | TCTCCACTGACTCATAGAGA+AGG | + | chr4.4:28129996-28130015 | MS.gene071518:intron | 45.0% |
| !! | TGTACGAGCATCGGTTACTA+TGG | - | chr4.4:28130635-28130654 | None:intergenic | 45.0% |
| !! | TTTGGGGAGTGGGTTATCAA+TGG | + | chr4.4:28128981-28129000 | MS.gene071518:CDS | 45.0% |
| !!! | ATCAGAGAGTTTTGGGGAGT+GGG | + | chr4.4:28128971-28128990 | MS.gene071518:CDS | 45.0% |
| !!! | TATCAGAGAGTTTTGGGGAG+TGG | + | chr4.4:28128970-28128989 | MS.gene071518:CDS | 45.0% |
| AATGCTGGAAACGGTTCAGG+AGG | + | chr4.4:28130325-28130344 | MS.gene071518:CDS | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | + | chr4.4:28131373-28131392 | MS.gene071518:intron | 50.0% | |
| CGACATGCTTGTACGAGCAT+CGG | - | chr4.4:28130644-28130663 | None:intergenic | 50.0% | |
| CGATTGAACCGTCTGAGTCA+TGG | - | chr4.4:28129821-28129840 | None:intergenic | 50.0% | |
| GACCTAGAGGTCTCATTGGT+TGG | + | chr4.4:28129927-28129946 | MS.gene071518:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | + | chr4.4:28131423-28131442 | MS.gene071518:CDS | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | + | chr4.4:28131004-28131023 | MS.gene071518:CDS | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | + | chr4.4:28131381-28131400 | MS.gene071518:intron | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | + | chr4.4:28130322-28130341 | MS.gene071518:CDS | 50.0% | |
| GTTGCATTGGAAGGCGAGAA+AGG | + | chr4.4:28128909-28128928 | MS.gene071518:CDS | 50.0% | |
| TAATGAAGGGGCCTACATGG+TGG | + | chr4.4:28130946-28130965 | MS.gene071518:intron | 50.0% | |
| TCCCGAGGACAAAATTGCCA+TGG | + | chr4.4:28130444-28130463 | MS.gene071518:CDS | 50.0% | |
| ! | CACTTTCGTTCCGGTTCTAG+TGG | + | chr4.4:28129780-28129799 | MS.gene071518:intron | 50.0% |
| ! | GCCATGGCAATTTTGTCCTC+GGG | - | chr4.4:28130448-28130467 | None:intergenic | 50.0% |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | - | chr4.4:28130443-28130462 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | + | chr4.4:28130538-28130557 | MS.gene071518:CDS | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | + | chr4.4:28130539-28130558 | MS.gene071518:CDS | 50.0% |
| !! | TCTTGCTCGTGCTGGTTGTA+TGG | + | chr4.4:28129106-28129125 | MS.gene071518:CDS | 50.0% |
| ACAACCAGCACGAGCAAGAC+CGG | - | chr4.4:28129105-28129124 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | + | chr4.4:28131385-28131404 | MS.gene071518:intron | 55.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | - | chr4.4:28130527-28130546 | None:intergenic | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | + | chr4.4:28131386-28131405 | MS.gene071518:intron | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | + | chr4.4:28131402-28131421 | MS.gene071518:CDS | 55.0% | |
| GTTCGGTCGCACTTTCGTTC+CGG | + | chr4.4:28129771-28129790 | MS.gene071518:intron | 55.0% | |
| TCTGATATTGCCTCCACGGC+AGG | - | chr4.4:28128957-28128976 | None:intergenic | 55.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | + | chr4.4:28130525-28130544 | MS.gene071518:CDS | 60.0% | |
| GATATTGCCTCCACGGCAGG+AGG | - | chr4.4:28128954-28128973 | None:intergenic | 60.0% | |
| TTTGCCGGTCTTGCTCGTGC+TGG | + | chr4.4:28129098-28129117 | MS.gene071518:CDS | 60.0% | |
| CCTCCACGGCAGGAGGAGTA+AGG | - | chr4.4:28128947-28128966 | None:intergenic | 65.0% | |
| CCTTACTCCTCCTGCCGTGG+AGG | + | chr4.4:28128944-28128963 | MS.gene071518:CDS | 65.0% | |
| CGACCTTACTCCTCCTGCCG+TGG | + | chr4.4:28128941-28128960 | MS.gene071518:CDS | 65.0% | |
| GACGCGACCCTCGAGTCACA+GGG | + | chr4.4:28129054-28129073 | MS.gene071518:CDS | 65.0% | |
| ! | AGGGGGGCTGACTTCACTGG+AGG | + | chr4.4:28129354-28129373 | MS.gene071518:CDS | 65.0% |
| ! | GAGAGGGGGGCTGACTTCAC+TGG | + | chr4.4:28129351-28129370 | MS.gene071518:CDS | 65.0% |
| GGACGCGACCCTCGAGTCAC+AGG | + | chr4.4:28129053-28129072 | MS.gene071518:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 28128657 | 28132040 | 28128657 | ID=MS.gene071518 |
| chr4.4 | mRNA | 28128657 | 28132040 | 28128657 | ID=MS.gene071518.t1;Parent=MS.gene071518 |
| chr4.4 | exon | 28128657 | 28129211 | 28128657 | ID=MS.gene071518.t1.exon1;Parent=MS.gene071518.t1 |
| chr4.4 | CDS | 28128657 | 28129211 | 28128657 | ID=cds.MS.gene071518.t1;Parent=MS.gene071518.t1 |
| chr4.4 | exon | 28129298 | 28129561 | 28129298 | ID=MS.gene071518.t1.exon2;Parent=MS.gene071518.t1 |
| chr4.4 | CDS | 28129298 | 28129561 | 28129298 | ID=cds.MS.gene071518.t1;Parent=MS.gene071518.t1 |
| chr4.4 | exon | 28130316 | 28130832 | 28130316 | ID=MS.gene071518.t1.exon3;Parent=MS.gene071518.t1 |
| chr4.4 | CDS | 28130316 | 28130832 | 28130316 | ID=cds.MS.gene071518.t1;Parent=MS.gene071518.t1 |
| chr4.4 | exon | 28130954 | 28131153 | 28130954 | ID=MS.gene071518.t1.exon4;Parent=MS.gene071518.t1 |
| chr4.4 | CDS | 28130954 | 28131153 | 28130954 | ID=cds.MS.gene071518.t1;Parent=MS.gene071518.t1 |
| chr4.4 | exon | 28131387 | 28131499 | 28131387 | ID=MS.gene071518.t1.exon5;Parent=MS.gene071518.t1 |
| chr4.4 | CDS | 28131387 | 28131499 | 28131387 | ID=cds.MS.gene071518.t1;Parent=MS.gene071518.t1 |
| chr4.4 | exon | 28131717 | 28131857 | 28131717 | ID=MS.gene071518.t1.exon6;Parent=MS.gene071518.t1 |
| chr4.4 | CDS | 28131717 | 28131857 | 28131717 | ID=cds.MS.gene071518.t1;Parent=MS.gene071518.t1 |
| chr4.4 | exon | 28131959 | 28132040 | 28131959 | ID=MS.gene071518.t1.exon7;Parent=MS.gene071518.t1 |
| chr4.4 | CDS | 28131959 | 28132040 | 28131959 | ID=cds.MS.gene071518.t1;Parent=MS.gene071518.t1 |
| Gene Sequence |
| Protein sequence |
