AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00614

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00614.t1 MTR_2g006070 99.115 339 3 0 2 340 3 341 0.0 686
MS.gene00614.t1 MTR_2g006070 99.174 242 2 0 2 243 3 244 3.52e-174 483
MS.gene00614.t1 MTR_8g081650 70.569 299 88 0 11 309 2 300 1.43e-154 437
MS.gene00614.t1 MTR_3g083960 66.163 331 101 2 11 341 2 321 9.60e-153 432
MS.gene00614.t1 MTR_4g074050 62.752 298 111 0 14 311 4 301 1.64e-144 411
MS.gene00614.t1 MTR_5g090020 65.574 305 104 1 11 314 2 306 1.09e-143 410
MS.gene00614.t1 MTR_2g006070 99.492 197 1 0 2 198 3 199 1.75e-139 394
MS.gene00614.t1 MTR_8g095060 63.729 295 107 0 12 306 1 295 9.21e-138 395
MS.gene00614.t1 MTR_3g097220 62.799 293 109 0 13 305 3 295 4.19e-137 393
MS.gene00614.t1 MTR_3g097220 62.799 293 109 0 13 305 3 295 1.90e-136 392
MS.gene00614.t1 MTR_5g090020 64.898 245 86 0 70 314 17 261 1.70e-109 322
MS.gene00614.t1 MTR_3g097220 61.111 198 77 0 108 305 1 198 4.08e-86 260
MS.gene00614.t1 MTR_5g049870 54.545 66 26 1 249 314 166 227 3.35e-14 72.0
MS.gene00614.t1 MTR_6g033100 21.451 317 213 4 45 328 38 351 4.16e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00614.t1 AT1G71900 78.736 348 62 3 1 341 1 343 0.0 568
MS.gene00614.t1 AT1G34470 78.754 353 62 5 1 341 1 352 0.0 547
MS.gene00614.t1 AT1G71900 75.504 347 76 3 1 339 1 346 0.0 538
MS.gene00614.t1 AT4G09640 75.766 359 69 4 1 341 1 359 0.0 514
MS.gene00614.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene00614.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene00614.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene00614.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene00614.t1 AT4G38730 62.540 315 118 0 12 326 1 315 1.22e-146 417
MS.gene00614.t1 AT2G21120 59.633 327 130 1 12 336 1 327 2.67e-146 416
MS.gene00614.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene00614.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene00614.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene00614.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene00614.t1 AT4G13800 71.321 265 76 0 10 274 2 266 2.91e-128 368
MS.gene00614.t1 AT4G13800 71.321 265 76 0 10 274 2 266 2.91e-128 368
MS.gene00614.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene00614.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene00614.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene00614.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene00614.t1 AT3G23870 64.840 219 77 0 96 314 8 226 1.10e-102 302
MS.gene00614.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4
MS.gene00614.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4
MS.gene00614.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4
MS.gene00614.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4

Find 87 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGACAGAGTTAACTTTA+TGG 0.185357 2.1:+75826359 None:intergenic
CCAAATGAATTATTTAAATA+AGG 0.190611 2.1:-75826271 MS.gene00614:intron
TGTGAACATAACATAATAAA+TGG 0.201399 2.1:+75825618 None:intergenic
GGCCAGTGTTATCATGTTTA+AGG 0.207394 2.1:-75825581 MS.gene00614:intron
GTCTCTCCCGTAAGATAATA+TGG 0.212620 2.1:+75826866 None:intergenic
TCATGGATTCTTGCCTTCTA+AGG 0.229929 2.1:+75823873 None:intergenic
CTACATATATTTGGAGTTCT+TGG 0.240196 2.1:-75826844 MS.gene00614:CDS
CGGGAGAGACTACATATATT+TGG 0.245641 2.1:-75826853 MS.gene00614:CDS
AAATGCATATGCTGCAAAAT+TGG 0.267357 2.1:+75827022 None:intergenic
CCTTATTTAAATAATTCATT+TGG 0.278708 2.1:+75826271 None:intergenic
TTCCACTTCATTCCTCTATA+TGG 0.280932 2.1:-75826574 MS.gene00614:CDS
TTGAATCAGTGCCAGAAGTA+TGG 0.285857 2.1:-75826759 MS.gene00614:CDS
TGCATTTGCTCCAGCTATAT+TGG 0.303829 2.1:-75827006 MS.gene00614:CDS
GTGCTCTTAGCATTATTATC+AGG 0.309781 2.1:-75826971 MS.gene00614:intron
GCCATAAAGTTAACTCTGTC+TGG 0.320249 2.1:-75826360 MS.gene00614:CDS
GGGTTTGTGACGATACTTTC+AGG 0.333057 2.1:-75824138 MS.gene00614:CDS
ATCGGCGTTTGTTCCCTTGT+AGG 0.337139 2.1:-75826529 MS.gene00614:CDS
AGCTAATTTACCCTCAAACT+TGG 0.354302 2.1:-75826329 MS.gene00614:CDS
CTCTTGCCCATATTATCTTA+CGG 0.372307 2.1:-75826873 MS.gene00614:CDS
TTGAAGGGATTCCCCTTAGA+AGG 0.372897 2.1:-75823886 MS.gene00614:CDS
TCTTGCCCATATTATCTTAC+GGG 0.384489 2.1:-75826872 MS.gene00614:CDS
CTTATTTAAATAATTCATTT+GGG 0.394380 2.1:+75826272 None:intergenic
TCTGCACAAGACTAAGGATA+TGG 0.397502 2.1:-75824106 MS.gene00614:CDS
GTTATGAGTGTTAAAGCTCT+TGG 0.407571 2.1:-75826387 MS.gene00614:CDS
GAAGTGGAAGACTAGAATAA+AGG 0.410967 2.1:+75826588 None:intergenic
GCTAGCACCGATGAAGAAAC+TGG 0.411958 2.1:+75828981 None:intergenic
CTTTCATCCAGTTTCTTCAT+CGG 0.435524 2.1:-75828988 MS.gene00614:CDS
GGTTGCGCTTTGTGTGTTGT+GGG 0.447928 2.1:-75826823 MS.gene00614:CDS
TATAAACCATTATGTGTGTC+TGG 0.458957 2.1:+75826551 None:intergenic
CGTACTTGTATGAACCACTT+TGG 0.464077 2.1:-75827682 MS.gene00614:CDS
ACACACATAATGGTTTATAT+CGG 0.464257 2.1:-75826547 MS.gene00614:CDS
TGGTTGCGCTTTGTGTGTTG+TGG 0.474355 2.1:-75826824 MS.gene00614:CDS
ATAGCAAGATCCCATACTTC+TGG 0.477024 2.1:+75826748 None:intergenic
ATATGGCCAGACACACATAA+TGG 0.478390 2.1:-75826557 MS.gene00614:CDS
CATGGATTCTTGCCTTCTAA+GGG 0.480099 2.1:+75823874 None:intergenic
GCTAATTTACCCTCAAACTT+GGG 0.485071 2.1:-75826328 MS.gene00614:CDS
GTGAACATAACATAATAAAT+GGG 0.492015 2.1:+75825619 None:intergenic
TGGGATCTTGCTATGGATCC+AGG 0.492129 2.1:-75826739 MS.gene00614:intron
GCTATATTGGTCACTCCGCT+TGG 0.493806 2.1:-75826993 MS.gene00614:CDS
CTTGATATCAGGACTGGGAT+AGG 0.499274 2.1:-75824194 MS.gene00614:intron
TCTACATGCTCCTCAAGAAC+GGG 0.499881 2.1:-75826785 MS.gene00614:CDS
TTCCCTTGTAGGCTCCCTAT+CGG 0.502213 2.1:-75826518 MS.gene00614:intron
TGAATCAGTGCCAGAAGTAT+GGG 0.505992 2.1:-75826758 MS.gene00614:CDS
AATATATCATGGCGATCTCA+TGG 0.507463 2.1:+75823856 None:intergenic
CAAGTTATCACAGAAATATG+TGG 0.508255 2.1:-75824159 MS.gene00614:CDS
ACTTGTATGAACCACTTTGG+TGG 0.510370 2.1:-75827679 MS.gene00614:CDS
TGGCGAGTTCCTCTTCTAGT+TGG 0.513230 2.1:-75829056 MS.gene00614:CDS
ATACCGATAGGGAGCCTACA+AGG 0.517647 2.1:+75826515 None:intergenic
ATTTCTGTGATAACTTGTGT+TGG 0.520381 2.1:+75824165 None:intergenic
TCTCTCCCGTAAGATAATAT+GGG 0.523037 2.1:+75826867 None:intergenic
AGCGGAGTGACCAATATAGC+TGG 0.526859 2.1:+75826996 None:intergenic
CTTGTATGAACCACTTTGGT+GGG 0.529827 2.1:-75827678 MS.gene00614:CDS
ATGTGTGTCTGGCCATATAG+AGG 0.529961 2.1:+75826562 None:intergenic
TCCTCTTCTAGTTGGCGAGA+GGG 0.533762 2.1:-75829048 MS.gene00614:CDS
GGCACTGGATACTTTCAATA+CGG 0.534954 2.1:-75825653 MS.gene00614:CDS
TTCTACATGCTCCTCAAGAA+CGG 0.536732 2.1:-75826786 MS.gene00614:CDS
GATTCAATTTCCCGTTCTTG+AGG 0.538754 2.1:+75826775 None:intergenic
TGCTCTGATTCCACTGGCAC+CGG 0.540042 2.1:+75828927 None:intergenic
TCCCTCTCGCCAACTAGAAG+AGG 0.541854 2.1:+75829047 None:intergenic
CCATAAAGTTAACTCTGTCT+GGG 0.546365 2.1:-75826359 MS.gene00614:CDS
GGTGCCAGTGGAATCAGAGC+AGG 0.559422 2.1:-75828925 MS.gene00614:intron
ATGTCCTCTGATAATATCAA+AGG 0.560524 2.1:-75829024 MS.gene00614:CDS
AGAAGTATGGGATCTTGCTA+TGG 0.564419 2.1:-75826746 MS.gene00614:CDS
TACCTTAAACATGATAACAC+TGG 0.564492 2.1:+75825579 None:intergenic
GATGGCTTTGATGATGTTGA+AGG 0.564589 2.1:-75823902 MS.gene00614:CDS
TATGAACCACTTTGGTGGGT+GGG 0.572479 2.1:-75827674 MS.gene00614:CDS
AGAACCTGCTCTGATTCCAC+TGG 0.576009 2.1:+75828921 None:intergenic
ACTTAATAAGCATTCAGAAG+AGG 0.578484 2.1:-75823924 MS.gene00614:CDS
AAGTTATCACAGAAATATGT+GGG 0.587076 2.1:-75824158 MS.gene00614:CDS
AATAAGCATTCAGAAGAGGA+TGG 0.595448 2.1:-75823920 MS.gene00614:CDS
GTATGAACCACTTTGGTGGG+TGG 0.597992 2.1:-75827675 MS.gene00614:CDS
ATGGCTTTGATGATGTTGAA+GGG 0.603839 2.1:-75823901 MS.gene00614:CDS
GATGATGAGACATACCGATA+GGG 0.605404 2.1:+75826504 None:intergenic
TTCCTCTTCTAGTTGGCGAG+AGG 0.609756 2.1:-75829049 MS.gene00614:CDS
TAAACCTTTGATATTATCAG+AGG 0.611108 2.1:+75829020 None:intergenic
CATGATAACACTGGCCACGA+TGG 0.614833 2.1:+75825588 None:intergenic
GTTGCGCTTTGTGTGTTGTG+GGG 0.616455 2.1:-75826822 MS.gene00614:CDS
ATCATGCCCACCCACCAAAG+TGG 0.624074 2.1:+75827668 None:intergenic
GGCCATATAGAGGAATGAAG+TGG 0.624973 2.1:+75826572 None:intergenic
TTATATGTTACAGGAAGTGG+AGG 0.627071 2.1:-75827710 MS.gene00614:intron
GGATACTTTCAATACGGCAG+TGG 0.630256 2.1:-75825647 MS.gene00614:CDS
AAGACTAAGGATATGGCAGA+AGG 0.630919 2.1:-75824099 MS.gene00614:intron
ATGGATTCTTGCCTTCTAAG+GGG 0.654525 2.1:+75823875 None:intergenic
TACCGATAGGGAGCCTACAA+GGG 0.655917 2.1:+75826516 None:intergenic
GTTCACAACATTAACCATCG+TGG 0.718448 2.1:-75825602 MS.gene00614:CDS
GGTAGCTGTTATAACCAATG+CGG 0.739413 2.1:+75826609 None:intergenic
ATAATGCTAAGAGCACCAAG+CGG 0.786625 2.1:+75826978 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTTAAATAATTCATTT+GGG + chr2.1:75826650-75826669 None:intergenic 10.0%
!! TTAAATATGTTAAAATGAAA+TGG - chr2.1:75824992-75825011 MS.gene00614:intron 10.0%
!! TTAAATATGTTAACATAAAA+TGG - chr2.1:75824787-75824806 MS.gene00614:intron 10.0%
!!! AATACATAAAAATGATTTTT+CGG - chr2.1:75826740-75826759 MS.gene00614:CDS 10.0%
!!! ATATTTATTTTTTGTATGAA+TGG - chr2.1:75828242-75828261 MS.gene00614:intron 10.0%
!! ATAAATAATGATGTAAAACA+TGG + chr2.1:75826901-75826920 None:intergenic 15.0%
!! CCAAATGAATTATTTAAATA+AGG - chr2.1:75826648-75826667 MS.gene00614:intron 15.0%
!! CTTAAAAAAAATCAAAATGA+AGG + chr2.1:75828577-75828596 None:intergenic 15.0%
!!! ATGTTTTACATCATTATTTA+TGG - chr2.1:75826900-75826919 MS.gene00614:intron 15.0%
!!! CCTTATTTAAATAATTCATT+TGG + chr2.1:75826651-75826670 None:intergenic 15.0%
!!! TAGAAGGATTTTTTTTTTTT+TGG - chr2.1:75825651-75825670 MS.gene00614:CDS 15.0%
!!! TCATTTTCTCAAATTATTAT+TGG + chr2.1:75824866-75824885 None:intergenic 15.0%
!!! TCATTTTGATTTTTTTTAAG+AGG - chr2.1:75828577-75828596 MS.gene00614:intron 15.0%
!!! TTAATAATCATGTTTTAAGA+TGG + chr2.1:75828935-75828954 None:intergenic 15.0%
!!! TTTTTTCTTCTTTTTTTTGA+CGG - chr2.1:75828180-75828199 MS.gene00614:intron 15.0%
!! AACATTATACAAGTTTAGAT+AGG + chr2.1:75825481-75825500 None:intergenic 20.0%
!! AACCTTAACAAATCTTAATA+GGG - chr2.1:75825513-75825532 MS.gene00614:intron 20.0%
!! ACAATATAAATACAGAAAGA+AGG + chr2.1:75826494-75826513 None:intergenic 20.0%
!! ACTATAACATAAGTAAAATC+AGG + chr2.1:75828306-75828325 None:intergenic 20.0%
!! AGCTTCATTGTTAAAAAAAA+GGG - chr2.1:75823958-75823977 MS.gene00614:intron 20.0%
!! CATTTATTTATACCAACAAA+TGG - chr2.1:75825819-75825838 MS.gene00614:intron 20.0%
!! GAAAGAAGGAAAAAAATAAA+CGG + chr2.1:75826480-75826499 None:intergenic 20.0%
!! GTGAACATAACATAATAAAT+GGG + chr2.1:75827303-75827322 None:intergenic 20.0%
!! TAGCTTCATTGTTAAAAAAA+AGG - chr2.1:75823957-75823976 MS.gene00614:intron 20.0%
!! TGAATATTAAACTTGATATC+AGG - chr2.1:75828714-75828733 MS.gene00614:intron 20.0%
!! TGTGAACATAACATAATAAA+TGG + chr2.1:75827304-75827323 None:intergenic 20.0%
!! TTCAAAGAATTATATGTTAC+AGG - chr2.1:75825200-75825219 MS.gene00614:intron 20.0%
!! TTCTTGATGTTTACATTTAT+TGG - chr2.1:75826689-75826708 MS.gene00614:intron 20.0%
!!! ACTTTTTTTTCTTCTTAATC+AGG - chr2.1:75827245-75827264 MS.gene00614:intron 20.0%
!!! GTTTTTACCTTTTCTTTAAT+GGG - chr2.1:75824147-75824166 MS.gene00614:CDS 20.0%
!!! TAATTTTTGAAGTACCTTAA+TGG - chr2.1:75826712-75826731 MS.gene00614:intron 20.0%
!!! TCTTCTTGCTTTTAATATAA+TGG - chr2.1:75827536-75827555 MS.gene00614:intron 20.0%
!!! TTATGTATTGTTTTCCATTA+AGG + chr2.1:75826729-75826748 None:intergenic 20.0%
!!! TTGGGATTATTTAATTTTCA+TGG - chr2.1:75824369-75824388 MS.gene00614:intron 20.0%
!!! TTTTTCTTCTTTTTTTTGAC+GGG - chr2.1:75828181-75828200 MS.gene00614:intron 20.0%
!!! TTTTTTTACATTATCCAGAT+TGG - chr2.1:75827410-75827429 MS.gene00614:intron 20.0%
! AAAAAAATAAACGGAGAACT+GGG + chr2.1:75826471-75826490 None:intergenic 25.0%
! AAAGTTACCCATTAAAGAAA+AGG + chr2.1:75824157-75824176 None:intergenic 25.0%
! AAATCCTTCTACAATAAATC+TGG + chr2.1:75825642-75825661 None:intergenic 25.0%
! AACATTTCAAGATTGAAACA+TGG + chr2.1:75826209-75826228 None:intergenic 25.0%
! AAGTTATCACAGAAATATGT+GGG - chr2.1:75828761-75828780 MS.gene00614:intron 25.0%
! AATCATTACAAAGAAAGTTG+AGG + chr2.1:75827972-75827991 None:intergenic 25.0%
! ACACACATAATGGTTTATAT+CGG - chr2.1:75826372-75826391 MS.gene00614:CDS 25.0%
! ACATAATTCAGTGTAATCAT+AGG - chr2.1:75824885-75824904 MS.gene00614:intron 25.0%
! ACCTTAACAAATCTTAATAG+GGG - chr2.1:75825514-75825533 MS.gene00614:intron 25.0%
! AGTTTAACATTATCATGATC+AGG + chr2.1:75824693-75824712 None:intergenic 25.0%
! ATAGTTTCGAACTTATGTTT+AGG - chr2.1:75827091-75827110 MS.gene00614:intron 25.0%
! ATCTTCAAATTAGCAAACAA+TGG + chr2.1:75828683-75828702 None:intergenic 25.0%
! ATGAATTTCACTAAATCATG+TGG + chr2.1:75828117-75828136 None:intergenic 25.0%
! ATGCATATAAATGCAAGTTT+AGG - chr2.1:75827032-75827051 MS.gene00614:CDS 25.0%
! CAAACACTTAAAAGATGAAA+AGG + chr2.1:75824214-75824233 None:intergenic 25.0%
! CAACTTTCATAAAATTGGAT+TGG - chr2.1:75824082-75824101 MS.gene00614:intron 25.0%
! CACGATAAAAATCAAAATGA+AGG + chr2.1:75828604-75828623 None:intergenic 25.0%
! CTTTCTGTATTTATATTGTC+AGG - chr2.1:75826495-75826514 MS.gene00614:intron 25.0%
! GAACCTTAACAAATCTTAAT+AGG - chr2.1:75825512-75825531 MS.gene00614:intron 25.0%
! GACTTCAACTTTCATAAAAT+TGG - chr2.1:75824077-75824096 MS.gene00614:intron 25.0%
! GGATAATGTAAAAAAAGCTA+CGG + chr2.1:75827406-75827425 None:intergenic 25.0%
! GTTTATCCTATAATCTTTCT+AGG + chr2.1:75824522-75824541 None:intergenic 25.0%
! TAAACCTTTGATATTATCAG+AGG + chr2.1:75823902-75823921 None:intergenic 25.0%
! TAAATTAAGCTTACTCGTTT+AGG + chr2.1:75824252-75824271 None:intergenic 25.0%
! TAACAAGAAACACAAATATG+AGG + chr2.1:75825139-75825158 None:intergenic 25.0%
! TACATCATTATTTATGGAAG+AGG - chr2.1:75826906-75826925 MS.gene00614:intron 25.0%
! TCTCAAATTATTATTGGTGT+CGG + chr2.1:75824860-75824879 None:intergenic 25.0%
! TCTTAACGATACTTATATAC+AGG - chr2.1:75827652-75827671 MS.gene00614:intron 25.0%
! TGAAACTTTAATCCATTTGT+TGG + chr2.1:75825834-75825853 None:intergenic 25.0%
! TGAATTTCACTAAATCATGT+GGG + chr2.1:75828116-75828135 None:intergenic 25.0%
! TGATACATGATAGAACATTA+TGG - chr2.1:75824583-75824602 MS.gene00614:intron 25.0%
! TGATCTATAGATTAATGAGT+TGG - chr2.1:75824551-75824570 MS.gene00614:intron 25.0%
! TTTAAATTAAGCAACCAATC+TGG + chr2.1:75827427-75827446 None:intergenic 25.0%
! TTTAATCGTCATGAAGAAAA+TGG - chr2.1:75824655-75824674 MS.gene00614:intron 25.0%
!! ACATTATCTATTTTGCATGA+TGG - chr2.1:75826810-75826829 MS.gene00614:CDS 25.0%
!! GAAAAAAAGATTGTGTCTTT+TGG + chr2.1:75826270-75826289 None:intergenic 25.0%
!! GGTTTTTACCTTTTCTTTAA+TGG - chr2.1:75824146-75824165 MS.gene00614:CDS 25.0%
!! TATTTCTACATTCCAATCTA+TGG - chr2.1:75825750-75825769 MS.gene00614:intron 25.0%
!! TTCATAAAATTGGATTGGAT+TGG - chr2.1:75824087-75824106 MS.gene00614:intron 25.0%
!!! ACTTTAACTGTTTTTCAAAC+TGG - chr2.1:75824172-75824191 MS.gene00614:CDS 25.0%
!!! ATGAATGGAGTACTTATTTT+TGG - chr2.1:75828257-75828276 MS.gene00614:intron 25.0%
!!! TTGTTTTCATGTTGTTTGTA+TGG - chr2.1:75824741-75824760 MS.gene00614:intron 25.0%
!!! TTTTCTTCTTTTTTTTGACG+GGG - chr2.1:75828182-75828201 MS.gene00614:intron 25.0%
AAAAAATAAACGGAGAACTG+GGG + chr2.1:75826470-75826489 None:intergenic 30.0%
AAAAAGGGTTTGAAAAAAGC+CGG - chr2.1:75823973-75823992 MS.gene00614:intron 30.0%
AAATAAACCAGTTCGACAAT+AGG + chr2.1:75827467-75827486 None:intergenic 30.0%
AAATGCATATGCTGCAAAAT+TGG + chr2.1:75825900-75825919 None:intergenic 30.0%
AACTCCAATCGTAGTAAAAA+TGG + chr2.1:75827948-75827967 None:intergenic 30.0%
AAGAAACACAAATATGAGGA+GGG + chr2.1:75825135-75825154 None:intergenic 30.0%
AAGCAAGAAGAACATAAACA+TGG + chr2.1:75827527-75827546 None:intergenic 30.0%
AAGCTAGATATGACACATTA+TGG - chr2.1:75827568-75827587 MS.gene00614:intron 30.0%
ACCAGTTTATGACATATATG+TGG + chr2.1:75828360-75828379 None:intergenic 30.0%
ACTTAAAAGATGAAAAGGCT+TGG + chr2.1:75824209-75824228 None:intergenic 30.0%
ACTTAATAAGCATTCAGAAG+AGG - chr2.1:75828995-75829014 MS.gene00614:CDS 30.0%
ACTTCAGATTTCCTTCTATT+GGG - chr2.1:75828880-75828899 MS.gene00614:intron 30.0%
AGAGTCAAGCATAAATATGA+AGG + chr2.1:75825988-75826007 None:intergenic 30.0%
ATATTGAGAAACGAGTGATT+GGG - chr2.1:75824351-75824370 MS.gene00614:intron 30.0%
ATGTCCTCTGATAATATCAA+AGG - chr2.1:75823895-75823914 MS.gene00614:CDS 30.0%
ATTAAACTTGATATCAGGAC+TGG - chr2.1:75828719-75828738 MS.gene00614:intron 30.0%
CAAATCTCAATTTCTCTGAA+TGG - chr2.1:75827790-75827809 MS.gene00614:intron 30.0%
CAAGTTATCACAGAAATATG+TGG - chr2.1:75828760-75828779 MS.gene00614:intron 30.0%
CAATCGTAGTAAAAATGGTA+GGG + chr2.1:75827943-75827962 None:intergenic 30.0%
CAATTCTTAATGTGTACCAA+AGG + chr2.1:75828547-75828566 None:intergenic 30.0%
CCAGTTTATGACATATATGT+GGG + chr2.1:75828359-75828378 None:intergenic 30.0%
CTTAGCATTATTATCAGGTA+TGG - chr2.1:75825953-75825972 MS.gene00614:intron 30.0%
CTTTGGTACACATTAAGAAT+TGG - chr2.1:75828545-75828564 MS.gene00614:intron 30.0%
GAAAAAAATAAACGGAGAAC+TGG + chr2.1:75826472-75826491 None:intergenic 30.0%
GAATTATATGTTACAGGAAG+TGG - chr2.1:75825206-75825225 MS.gene00614:intron 30.0%
GATACTTATATACAGGTTGT+TGG - chr2.1:75827659-75827678 MS.gene00614:intron 30.0%
TACACAGTTTAATTCGTAGA+AGG + chr2.1:75827171-75827190 None:intergenic 30.0%
TACCTTAAACATGATAACAC+TGG + chr2.1:75827343-75827362 None:intergenic 30.0%
TACTTCAGATTTCCTTCTAT+TGG - chr2.1:75828879-75828898 MS.gene00614:intron 30.0%
TATAAACCATTATGTGTGTC+TGG + chr2.1:75826371-75826390 None:intergenic 30.0%
TCAGATCAATAAGTTGTACA+TGG + chr2.1:75825791-75825810 None:intergenic 30.0%
TTAAACTTGATATCAGGACT+GGG - chr2.1:75828720-75828739 MS.gene00614:intron 30.0%
TTGATTATTGAATTGCATGC+TGG - chr2.1:75825310-75825329 MS.gene00614:intron 30.0%
TTGTCCAGATTTATTGTAGA+AGG - chr2.1:75825635-75825654 MS.gene00614:CDS 30.0%
TTGTGCAACATCTTATTGTT+TGG - chr2.1:75825356-75825375 MS.gene00614:intron 30.0%
! AATCCTAAATGTTTTGTGCA+CGG - chr2.1:75827144-75827163 MS.gene00614:intron 30.0%
! ACACATTGGTACATCTATTT+TGG - chr2.1:75827200-75827219 MS.gene00614:intron 30.0%
! ATAGATTAATGAGTTGGACA+GGG - chr2.1:75824557-75824576 MS.gene00614:intron 30.0%
! ATTTCTGTGATAACTTGTGT+TGG + chr2.1:75828757-75828776 None:intergenic 30.0%
! CACATTGGTACATCTATTTT+GGG - chr2.1:75827201-75827220 MS.gene00614:intron 30.0%
! CTACATATATTTGGAGTTCT+TGG - chr2.1:75826075-75826094 MS.gene00614:intron 30.0%
! GTGTAGTAACTTTTACACAT+TGG - chr2.1:75827186-75827205 MS.gene00614:intron 30.0%
! GTTGTACATGGATAATTTGT+TGG + chr2.1:75825779-75825798 None:intergenic 30.0%
! TATAGATTAATGAGTTGGAC+AGG - chr2.1:75824556-75824575 MS.gene00614:intron 30.0%
! TCTTCTTTTACATGCTTACT+AGG - chr2.1:75828960-75828979 MS.gene00614:CDS 30.0%
! TGCACAAAACATTTAGGATT+AGG + chr2.1:75827144-75827163 None:intergenic 30.0%
! TTCTTGTTATATACCCAATC+AGG - chr2.1:75825150-75825169 MS.gene00614:intron 30.0%
! TTGGATTGGATTGGATTATT+AGG - chr2.1:75824096-75824115 MS.gene00614:intron 30.0%
! TTGTCAGGTTCTCTTTTAAT+AGG - chr2.1:75826510-75826529 MS.gene00614:intron 30.0%
! TTTTCTATTTTATGCCGCAT+TGG - chr2.1:75826296-75826315 MS.gene00614:CDS 30.0%
!! AACATCTTATTGTTTGGTGT+TGG - chr2.1:75825362-75825381 MS.gene00614:intron 30.0%
!! ACCCCTATTAAGATTTGTTA+AGG + chr2.1:75825518-75825537 None:intergenic 30.0%
!! GGTAAATTTTGTTATGAGAC+TGG - chr2.1:75827359-75827378 MS.gene00614:intron 30.0%
!! TTTGATTTTTATCGTGTTCC+AGG - chr2.1:75828608-75828627 MS.gene00614:intron 30.0%
!!! AAAATGGTAGGGTTTTGATT+TGG + chr2.1:75827932-75827951 None:intergenic 30.0%
!!! AAATGGTAGGGTTTTGATTT+GGG + chr2.1:75827931-75827950 None:intergenic 30.0%
!!! CTTAAGATCTGCATTTTTTG+GGG - chr2.1:75824125-75824144 MS.gene00614:CDS 30.0%
!!! GCTTAAGATCTGCATTTTTT+GGG - chr2.1:75824124-75824143 MS.gene00614:CDS 30.0%
!!! TAATCATGTTTTAAGATGGC+AGG + chr2.1:75828931-75828950 None:intergenic 30.0%
!!! TGCTTAAGATCTGCATTTTT+TGG - chr2.1:75824123-75824142 MS.gene00614:CDS 30.0%
!!! TTTCTTCTTTTTTTTGACGG+GGG - chr2.1:75828183-75828202 MS.gene00614:intron 30.0%
AAAAATAAACGGAGAACTGG+GGG + chr2.1:75826469-75826488 None:intergenic 35.0%
AATAAGCATTCAGAAGAGGA+TGG - chr2.1:75828999-75829018 MS.gene00614:CDS 35.0%
AGAAACACAAATATGAGGAG+GGG + chr2.1:75825134-75825153 None:intergenic 35.0%
AGCACAATAGTTACATGTAG+AGG + chr2.1:75827843-75827862 None:intergenic 35.0%
AGCTAATTTACCCTCAAACT+TGG - chr2.1:75826590-75826609 MS.gene00614:CDS 35.0%
ATTTGCATGATCTATCACAC+TGG + chr2.1:75827775-75827794 None:intergenic 35.0%
CAAGAAACACAAATATGAGG+AGG + chr2.1:75825136-75825155 None:intergenic 35.0%
CCAATCGTAGTAAAAATGGT+AGG + chr2.1:75827944-75827963 None:intergenic 35.0%
CCATAAAGTTAACTCTGTCT+GGG - chr2.1:75826560-75826579 MS.gene00614:CDS 35.0%
CCCACATATATGTCATAAAC+TGG - chr2.1:75828356-75828375 MS.gene00614:intron 35.0%
CTCTTGCCCATATTATCTTA+CGG - chr2.1:75826046-75826065 MS.gene00614:intron 35.0%
CTTTCATCCAGTTTCTTCAT+CGG - chr2.1:75823931-75823950 MS.gene00614:CDS 35.0%
GAAGTGGAAGACTAGAATAA+AGG + chr2.1:75826334-75826353 None:intergenic 35.0%
GAATAAATTACCTTCTGCTG+AGG - chr2.1:75828405-75828424 MS.gene00614:intron 35.0%
GAATAACAGTAGAGATAGAG+CGG + chr2.1:75828017-75828036 None:intergenic 35.0%
GATAACAAGTGAGTCATTCA+TGG - chr2.1:75825271-75825290 MS.gene00614:intron 35.0%
GATATTGAGAAACGAGTGAT+TGG - chr2.1:75824350-75824369 MS.gene00614:intron 35.0%
GATGATGCAAGTGTAATGAA+TGG - chr2.1:75826996-75827015 MS.gene00614:CDS 35.0%
GCACAATAGTTACATGTAGA+GGG + chr2.1:75827842-75827861 None:intergenic 35.0%
GCTAATTTACCCTCAAACTT+GGG - chr2.1:75826591-75826610 MS.gene00614:CDS 35.0%
GCTCATTTCTTAAACAAGCA+TGG - chr2.1:75828509-75828528 MS.gene00614:intron 35.0%
GGAAGACCTAGAAAGATTAT+AGG - chr2.1:75824513-75824532 MS.gene00614:intron 35.0%
GGAATGTAGAAATATTCCCA+TGG + chr2.1:75825744-75825763 None:intergenic 35.0%
GTGCTCTTAGCATTATTATC+AGG - chr2.1:75825948-75825967 MS.gene00614:intron 35.0%
GTTATGAGTGTTAAAGCTCT+TGG - chr2.1:75826532-75826551 MS.gene00614:CDS 35.0%
GTTGATGCCTTATATTCGAA+TGG - chr2.1:75826943-75826962 MS.gene00614:intron 35.0%
TAATGAAATGAAGCAGCAAG+TGG + chr2.1:75824039-75824058 None:intergenic 35.0%
TCTCTCCCGTAAGATAATAT+GGG + chr2.1:75826055-75826074 None:intergenic 35.0%
TCTTGCCCATATTATCTTAC+GGG - chr2.1:75826047-75826066 MS.gene00614:intron 35.0%
TGGATGCTTATCAACTCTAT+TGG - chr2.1:75825012-75825031 MS.gene00614:intron 35.0%
TTACATGTAGAGGGAAGATT+AGG + chr2.1:75827833-75827852 None:intergenic 35.0%
TTATATGTTACAGGAAGTGG+AGG - chr2.1:75825209-75825228 MS.gene00614:intron 35.0%
TTCAGCGCAACAAACTAATT+GGG - chr2.1:75824278-75824297 MS.gene00614:intron 35.0%
TTCAGTGTAATCATAGGTGT+CGG - chr2.1:75824891-75824910 MS.gene00614:intron 35.0%
TTCCACTTCATTCCTCTATA+TGG - chr2.1:75826345-75826364 MS.gene00614:CDS 35.0%
TTTCAGCGCAACAAACTAAT+TGG - chr2.1:75824277-75824296 MS.gene00614:intron 35.0%
! CAAAGATCTCTCTCTTCTTT+TGG + chr2.1:75828384-75828403 None:intergenic 35.0%
! CTCTGAATGGTTTGACTTAT+AGG - chr2.1:75827803-75827822 MS.gene00614:intron 35.0%
! TGCTTTCACACATTTTCCAT+GGG - chr2.1:75825725-75825744 MS.gene00614:intron 35.0%
! TTCATGGAGAGTATATCAGA+TGG - chr2.1:75824385-75824404 MS.gene00614:intron 35.0%
! TTGCTTTCACACATTTTCCA+TGG - chr2.1:75825724-75825743 MS.gene00614:intron 35.0%
! TTTTCTTCTGCACAAGACTA+AGG - chr2.1:75828807-75828826 MS.gene00614:intron 35.0%
! TTTTCTTCTTAATCAGGCAC+TGG - chr2.1:75827251-75827270 MS.gene00614:intron 35.0%
!! AATCAGGTTGACATACTTCT+AGG + chr2.1:75828290-75828309 None:intergenic 35.0%
!! AGATTTGTTAAGGTTCTGCA+TGG + chr2.1:75825508-75825527 None:intergenic 35.0%
!! ATGGCTTTGATGATGTTGAA+GGG - chr2.1:75829018-75829037 MS.gene00614:CDS 35.0%
!! ATTGGTACATCTATTTTGGG+TGG - chr2.1:75827204-75827223 MS.gene00614:intron 35.0%
!! CCTACCATTTTTACTACGAT+TGG - chr2.1:75827941-75827960 MS.gene00614:intron 35.0%
!! TTAGTTTGTTGCGCTGAAAA+TGG + chr2.1:75824276-75824295 None:intergenic 35.0%
!!! GCTTTTTCAACAGTGATTGT+CGG - chr2.1:75825866-75825885 MS.gene00614:intron 35.0%
AAAACGAAGCAGGATTTGTG+GGG + chr2.1:75825417-75825436 None:intergenic 40.0%
AAAATAAACGGAGAACTGGG+GGG + chr2.1:75826468-75826487 None:intergenic 40.0%
AACCAAATCCTATTTCCGCT+TGG - chr2.1:75827702-75827721 MS.gene00614:intron 40.0%
AAGACTAAGGATATGGCAGA+AGG - chr2.1:75828820-75828839 MS.gene00614:intron 40.0%
AAGATTGAAACATGGCTACC+TGG + chr2.1:75826201-75826220 None:intergenic 40.0%
ACGTACACATACCTTCAACA+GGG - chr2.1:75828466-75828485 MS.gene00614:intron 40.0%
ACTTGTATGAACCACTTTGG+TGG - chr2.1:75825240-75825259 MS.gene00614:intron 40.0%
AGAGCAAAAACCCAAGTTTG+AGG + chr2.1:75826604-75826623 None:intergenic 40.0%
AGATGATGAGACATACCGAT+AGG + chr2.1:75826419-75826438 None:intergenic 40.0%
ATAGAGCGGAAGACTAGAAA+TGG + chr2.1:75828003-75828022 None:intergenic 40.0%
ATAGCAAGATCCCATACTTC+TGG + chr2.1:75826174-75826193 None:intergenic 40.0%
ATATGGCCAGACACACATAA+TGG - chr2.1:75826362-75826381 MS.gene00614:CDS 40.0%
ATGGATTCTTGCCTTCTAAG+GGG + chr2.1:75829047-75829066 None:intergenic 40.0%
CATGGATTCTTGCCTTCTAA+GGG + chr2.1:75829048-75829067 None:intergenic 40.0%
CCCAGACAGAGTTAACTTTA+TGG + chr2.1:75826563-75826582 None:intergenic 40.0%
CGGGAGAGACTACATATATT+TGG - chr2.1:75826066-75826085 MS.gene00614:intron 40.0%
CGTACTTGTATGAACCACTT+TGG - chr2.1:75825237-75825256 MS.gene00614:intron 40.0%
CTGCAAGCCATTCGAATATA+AGG + chr2.1:75826953-75826972 None:intergenic 40.0%
CTGTGGCAGTTATGCTATAA+AGG - chr2.1:75826853-75826872 MS.gene00614:CDS 40.0%
CTTGTATGAACCACTTTGGT+GGG - chr2.1:75825241-75825260 MS.gene00614:intron 40.0%
GAAAACGAAGCAGGATTTGT+GGG + chr2.1:75825418-75825437 None:intergenic 40.0%
GAAGAAAATGGAGTATGCTG+TGG - chr2.1:75824667-75824686 MS.gene00614:intron 40.0%
GAATTGTGCATGACCTGATT+GGG + chr2.1:75825166-75825185 None:intergenic 40.0%
GACCCATAAAACCACCAATT+CGG + chr2.1:75827885-75827904 None:intergenic 40.0%
GAGCAAAAACCCAAGTTTGA+GGG + chr2.1:75826603-75826622 None:intergenic 40.0%
GATGATGAGACATACCGATA+GGG + chr2.1:75826418-75826437 None:intergenic 40.0%
GATTCAATTTCCCGTTCTTG+AGG + chr2.1:75826147-75826166 None:intergenic 40.0%
GCCATAAAGTTAACTCTGTC+TGG - chr2.1:75826559-75826578 MS.gene00614:CDS 40.0%
GGCCAGTGTTATCATGTTTA+AGG - chr2.1:75827338-75827357 MS.gene00614:intron 40.0%
GGTAGCTGTTATAACCAATG+CGG + chr2.1:75826313-75826332 None:intergenic 40.0%
GGTAGTGTCAAAATCACTAG+AGG - chr2.1:75824410-75824429 MS.gene00614:intron 40.0%
GTCTCTCCCGTAAGATAATA+TGG + chr2.1:75826056-75826075 None:intergenic 40.0%
GTTCACAACATTAACCATCG+TGG - chr2.1:75827317-75827336 MS.gene00614:intron 40.0%
TAAACCAATGAATCTGCACC+TGG + chr2.1:75828629-75828648 None:intergenic 40.0%
TACGTACACATACCTTCAAC+AGG - chr2.1:75828465-75828484 MS.gene00614:intron 40.0%
TACTCCTCGAATTATGTGTG+CGG + chr2.1:75824957-75824976 None:intergenic 40.0%
TCATGGATTCTTGCCTTCTA+AGG + chr2.1:75829049-75829068 None:intergenic 40.0%
TCTGCACAAGACTAAGGATA+TGG - chr2.1:75828813-75828832 MS.gene00614:intron 40.0%
TGAAAACGAAGCAGGATTTG+TGG + chr2.1:75825419-75825438 None:intergenic 40.0%
TGAATTGTGCATGACCTGAT+TGG + chr2.1:75825167-75825186 None:intergenic 40.0%
TGCAAGTTTAGGTATCTGAG+TGG - chr2.1:75827043-75827062 MS.gene00614:CDS 40.0%
TGCATTTGCTCCAGCTATAT+TGG - chr2.1:75825913-75825932 MS.gene00614:intron 40.0%
TGTCAAATCACTAGAGTCAG+CGG - chr2.1:75824492-75824511 MS.gene00614:intron 40.0%
TTCTACATGCTCCTCAAGAA+CGG - chr2.1:75826133-75826152 MS.gene00614:intron 40.0%
TTGAATCAGTGCCAGAAGTA+TGG - chr2.1:75826160-75826179 MS.gene00614:intron 40.0%
TTGATCTGACTCCACTTAGA+GGG - chr2.1:75824612-75824631 MS.gene00614:intron 40.0%
TTTGATCTGACTCCACTTAG+AGG - chr2.1:75824611-75824630 MS.gene00614:intron 40.0%
! AGAAGTATGGGATCTTGCTA+TGG - chr2.1:75826173-75826192 MS.gene00614:intron 40.0%
! ATGGAGAGTATATCAGATGG+AGG - chr2.1:75824388-75824407 MS.gene00614:intron 40.0%
! ATTTGTTGGCGTCCATAGAT+TGG + chr2.1:75825765-75825784 None:intergenic 40.0%
! CTTATATTCGAATGGCTTGC+AGG - chr2.1:75826951-75826970 MS.gene00614:intron 40.0%
! GATTCGTGGATTTTCTACTG+AGG - chr2.1:75824446-75824465 MS.gene00614:intron 40.0%
! GCTTATCAACTCTATTGGCT+CGG - chr2.1:75825017-75825036 MS.gene00614:intron 40.0%
! GGCACTGGATACTTTCAATA+CGG - chr2.1:75827266-75827285 MS.gene00614:intron 40.0%
! TGAATCAGTGCCAGAAGTAT+GGG - chr2.1:75826161-75826180 MS.gene00614:intron 40.0%
! TGGAGAGTATATCAGATGGA+GGG - chr2.1:75824389-75824408 MS.gene00614:intron 40.0%
!! ACTCCGAATTGGTGGTTTTA+TGG - chr2.1:75827879-75827898 MS.gene00614:intron 40.0%
!! AGTTATTTTGCAGTCTGCTG+TGG - chr2.1:75826836-75826855 MS.gene00614:CDS 40.0%
!! ATAATGCTAAGAGCACCAAG+CGG + chr2.1:75825944-75825963 None:intergenic 40.0%
!! GATGGCTTTGATGATGTTGA+AGG - chr2.1:75829017-75829036 MS.gene00614:CDS 40.0%
!!! CTCCGAATTGGTGGTTTTAT+GGG - chr2.1:75827880-75827899 MS.gene00614:intron 40.0%
ATGAAGCACAGATACAGACG+CGG - chr2.1:75824829-75824848 MS.gene00614:intron 45.0%
ATGGAGACTCGCAAATCCTT+TGG - chr2.1:75828528-75828547 MS.gene00614:intron 45.0%
ATGTGTGTCTGGCCATATAG+AGG + chr2.1:75826360-75826379 None:intergenic 45.0%
ATTCGGAGTAGAGTCGATAG+AGG + chr2.1:75827868-75827887 None:intergenic 45.0%
ATTTAGCCAACTCCACCAAG+CGG + chr2.1:75827720-75827739 None:intergenic 45.0%
CAAATCCTATTTCCGCTTGG+TGG - chr2.1:75827705-75827724 MS.gene00614:intron 45.0%
CACCAAGCGGAAATAGGATT+TGG + chr2.1:75827707-75827726 None:intergenic 45.0%
CCACTTAGAGGGATAAGACT+TGG - chr2.1:75824623-75824642 MS.gene00614:intron 45.0%
CTAGAAGCTGAAAACGAAGC+AGG + chr2.1:75825427-75825446 None:intergenic 45.0%
CTTGATATCAGGACTGGGAT+AGG - chr2.1:75828725-75828744 MS.gene00614:intron 45.0%
GATGTAAATGCCTCAGCAGA+AGG + chr2.1:75828418-75828437 None:intergenic 45.0%
GATTTGACACTACCCTCCAT+CGG + chr2.1:75824481-75824500 None:intergenic 45.0%
GCATGTTGAGAGAAGATTCG+TGG - chr2.1:75824432-75824451 MS.gene00614:intron 45.0%
GGACCGTGCACAAAACATTT+AGG + chr2.1:75827150-75827169 None:intergenic 45.0%
GGATACTTTCAATACGGCAG+TGG - chr2.1:75827272-75827291 MS.gene00614:intron 45.0%
GGCCATATAGAGGAATGAAG+TGG + chr2.1:75826350-75826369 None:intergenic 45.0%
GGGTTTGTGACGATACTTTC+AGG - chr2.1:75828781-75828800 MS.gene00614:intron 45.0%
GTTTGTATACGGAGTGGGTA+GGG - chr2.1:75825044-75825063 MS.gene00614:intron 45.0%
TCTACATGCTCCTCAAGAAC+GGG - chr2.1:75826134-75826153 MS.gene00614:intron 45.0%
TGCATTGTGAGCCCAATAGA+AGG + chr2.1:75828894-75828913 None:intergenic 45.0%
TGTTCCAGGTGCAGATTCAT+TGG - chr2.1:75828622-75828641 MS.gene00614:intron 45.0%
TTGAAGGGATTCCCCTTAGA+AGG - chr2.1:75829033-75829052 MS.gene00614:CDS 45.0%
TTTGTATACGGAGTGGGTAG+GGG - chr2.1:75825045-75825064 MS.gene00614:intron 45.0%
! ATATTCGAATGGCTTGCAGG+TGG - chr2.1:75826954-75826973 MS.gene00614:intron 45.0%
! CCAAGTCTTATCCCTCTAAG+TGG + chr2.1:75824626-75824645 None:intergenic 45.0%
! GCAGTTTTACACCCTGTTGA+AGG + chr2.1:75828480-75828499 None:intergenic 45.0%
! TATGAACCACTTTGGTGGGT+GGG - chr2.1:75825245-75825264 MS.gene00614:intron 45.0%
! TCTGAAGCCTATTGTCGAAC+TGG - chr2.1:75827457-75827476 MS.gene00614:intron 45.0%
!! CTATCGACTCTACTCCGAAT+TGG - chr2.1:75827868-75827887 MS.gene00614:intron 45.0%
!! GAGGAGTATCAGTGCTTCAT+AGG - chr2.1:75824969-75824988 MS.gene00614:intron 45.0%
!! GCTTGGTTTGTATACGGAGT+GGG - chr2.1:75825039-75825058 MS.gene00614:intron 45.0%
!! GGGGCAAGTTTCGTTTTTCA+AGG - chr2.1:75825065-75825084 MS.gene00614:intron 45.0%
!! GTACATCTATTTTGGGTGGC+TGG - chr2.1:75827208-75827227 MS.gene00614:intron 45.0%
ACTGAGGAGAGTAGATCCGA+TGG - chr2.1:75824462-75824481 MS.gene00614:intron 50.0%
AGAACCTGCTCTGATTCCAC+TGG + chr2.1:75824001-75824020 None:intergenic 50.0%
AGCGGAGTGACCAATATAGC+TGG + chr2.1:75825926-75825945 None:intergenic 50.0%
AGGAGAGTAGATCCGATGGA+GGG - chr2.1:75824466-75824485 MS.gene00614:intron 50.0%
ATACCGATAGGGAGCCTACA+AGG + chr2.1:75826407-75826426 None:intergenic 50.0%
ATCGGCGTTTGTTCCCTTGT+AGG - chr2.1:75826390-75826409 MS.gene00614:CDS 50.0%
CAACTCCACCAAGCGGAAAT+AGG + chr2.1:75827713-75827732 None:intergenic 50.0%
CAAGTAGAGAGGTCGCGATA+GGG + chr2.1:75828077-75828096 None:intergenic 50.0%
CAGCAGCACTTCAAGTAGAG+AGG + chr2.1:75828088-75828107 None:intergenic 50.0%
CAGGTGGATAGTGAGTAGGA+AGG - chr2.1:75826970-75826989 MS.gene00614:intron 50.0%
CATGATAACACTGGCCACGA+TGG + chr2.1:75827334-75827353 None:intergenic 50.0%
CTTGCAGGTGGATAGTGAGT+AGG - chr2.1:75826966-75826985 MS.gene00614:intron 50.0%
GCTATATTGGTCACTCCGCT+TGG - chr2.1:75825926-75825945 MS.gene00614:intron 50.0%
GGTTGCGCTTTGTGTGTTGT+GGG - chr2.1:75826096-75826115 MS.gene00614:intron 50.0%
GGTTTGTATACGGAGTGGGT+AGG - chr2.1:75825043-75825062 MS.gene00614:intron 50.0%
GTATGAACCACTTTGGTGGG+TGG - chr2.1:75825244-75825263 MS.gene00614:intron 50.0%
GTTGCGCTTTGTGTGTTGTG+GGG - chr2.1:75826097-75826116 MS.gene00614:intron 50.0%
TAAGATGGCAGGACAGCACT+AGG + chr2.1:75828920-75828939 None:intergenic 50.0%
TACCGATAGGGAGCCTACAA+GGG + chr2.1:75826406-75826425 None:intergenic 50.0%
TCAAGTAGAGAGGTCGCGAT+AGG + chr2.1:75828078-75828097 None:intergenic 50.0%
TCCTCGAATTATGTGTGCGG+CGG + chr2.1:75824954-75824973 None:intergenic 50.0%
TCGACTCTACTCCGAATTGG+TGG - chr2.1:75827871-75827890 MS.gene00614:intron 50.0%
TGGCGAGTTCCTCTTCTAGT+TGG - chr2.1:75823863-75823882 MS.gene00614:CDS 50.0%
TGGTTGCGCTTTGTGTGTTG+TGG - chr2.1:75826095-75826114 MS.gene00614:intron 50.0%
TTCCCTTGTAGGCTCCCTAT+CGG - chr2.1:75826401-75826420 MS.gene00614:intron 50.0%
TTGTATACGGAGTGGGTAGG+GGG - chr2.1:75825046-75825065 MS.gene00614:intron 50.0%
! CTATTTCCGCTTGGTGGAGT+TGG - chr2.1:75827711-75827730 MS.gene00614:intron 50.0%
! TCCTCTTCTAGTTGGCGAGA+GGG - chr2.1:75823871-75823890 MS.gene00614:CDS 50.0%
! TGGGATCTTGCTATGGATCC+AGG - chr2.1:75826180-75826199 MS.gene00614:intron 50.0%
! TTCCTCTTCTAGTTGGCGAG+AGG - chr2.1:75823870-75823889 MS.gene00614:CDS 50.0%
! TTGAAAAAAGCCGGTGCCAG+TGG - chr2.1:75823982-75824001 MS.gene00614:intron 50.0%
!! GCTAGCACCGATGAAGAAAC+TGG + chr2.1:75823941-75823960 None:intergenic 50.0%
!! GGCTCGGCTTGGTTTGTATA+CGG - chr2.1:75825033-75825052 MS.gene00614:intron 50.0%
!! GGCTTGGTTTGTATACGGAG+TGG - chr2.1:75825038-75825057 MS.gene00614:intron 50.0%
!! TCAACTCTATTGGCTCGGCT+TGG - chr2.1:75825022-75825041 MS.gene00614:intron 50.0%
!!! GGTAGGGTTTTGATTTGGGC+TGG + chr2.1:75827927-75827946 None:intergenic 50.0%
ACCGCCGCACACATAATTCG+AGG - chr2.1:75824950-75824969 MS.gene00614:intron 55.0%
ATCATGCCCACCCACCAAAG+TGG + chr2.1:75825254-75825273 None:intergenic 55.0%
GAGGAGAGTAGATCCGATGG+AGG - chr2.1:75824465-75824484 MS.gene00614:intron 55.0%
GGAGAACTGGGGGGAAAACA+AGG + chr2.1:75826459-75826478 None:intergenic 55.0%
TCCCTCTCGCCAACTAGAAG+AGG + chr2.1:75823875-75823894 None:intergenic 55.0%
TGCTCTGATTCCACTGGCAC+CGG + chr2.1:75823995-75824014 None:intergenic 55.0%
! ACATGTGTCGGTGTCCGACA+TGG + chr2.1:75824925-75824944 None:intergenic 55.0%
! CGGCGGTGTCAAACATGTGT+CGG + chr2.1:75824937-75824956 None:intergenic 55.0%
!! TGTCGGTGTCGTGTCCATGT+CGG - chr2.1:75824908-75824927 MS.gene00614:intron 55.0%
GGGACAGAGCAGCAGCAGAA+AGG + chr2.1:75828057-75828076 None:intergenic 60.0%
GGTGCCAGTGGAATCAGAGC+AGG - chr2.1:75823994-75824013 MS.gene00614:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 75823862 75829079 75823862 ID=MS.gene00614
chr2.1 mRNA 75823862 75829079 75823862 ID=MS.gene00614.t1;Parent=MS.gene00614
chr2.1 exon 75828926 75829079 75828926 ID=MS.gene00614.t1.exon1;Parent=MS.gene00614.t1
chr2.1 CDS 75828926 75829079 75828926 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75827663 75827719 75827663 ID=MS.gene00614.t1.exon2;Parent=MS.gene00614.t1
chr2.1 CDS 75827663 75827719 75827663 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75826972 75827062 75826972 ID=MS.gene00614.t1.exon3;Parent=MS.gene00614.t1
chr2.1 CDS 75826972 75827062 75826972 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75826740 75826900 75826740 ID=MS.gene00614.t1.exon4;Parent=MS.gene00614.t1
chr2.1 CDS 75826740 75826900 75826740 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75826519 75826646 75826519 ID=MS.gene00614.t1.exon5;Parent=MS.gene00614.t1
chr2.1 CDS 75826519 75826646 75826519 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75826272 75826409 75826272 ID=MS.gene00614.t1.exon6;Parent=MS.gene00614.t1
chr2.1 CDS 75826272 75826409 75826272 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75825582 75825674 75825582 ID=MS.gene00614.t1.exon7;Parent=MS.gene00614.t1
chr2.1 CDS 75825582 75825674 75825582 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75824100 75824205 75824100 ID=MS.gene00614.t1.exon8;Parent=MS.gene00614.t1
chr2.1 CDS 75824100 75824205 75824100 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
chr2.1 exon 75823862 75823959 75823862 ID=MS.gene00614.t1.exon9;Parent=MS.gene00614.t1
chr2.1 CDS 75823862 75823959 75823862 ID=cds.MS.gene00614.t1;Parent=MS.gene00614.t1
Gene Sequence

>MS.gene00614

ATGGCGAGTTCCTCTTCTAGTTGGCGAGAGGGAATGTCCTCTGATAATATCAAAGGTTTAGTTCTCGCTCTTTCATCCAGTTTCTTCATCGGTGCTAGCTTCATTGTTAAAAAAAAGGGTTTGAAAAAAGCCGGTGCCAGTGGAATCAGAGCAGGTTCTATTCTATTCTTCGATCCACTTGCTGCTTCATTTCATTATGTTTACTTCTCATTCTCGACTTCAACTTTCATAAAATTGGATTGGATTGGATTATTAGGTTTTTGCTTAAGATCTGCATTTTTTGGGGTTTTTACCTTTTCTTTAATGGGTAACTTTAACTGTTTTTCAAACTGGATTTTGCAATGCCAAGCCTTTTCATCTTTTAAGTGTTTGCATAACATTTTACAACCTAAACGAGTAAGCTTAATTTATCCATTTTCAGCGCAACAAACTAATTGGGATAAAGATATCTCTTTGATGCTCTTATCTATTATTTTCTTGTGCTATTTGATATTGAGAAACGAGTGATTGGGATTATTTAATTTTCATGGAGAGTATATCAGATGGAGGGTAGTGTCAAAATCACTAGAGGCATGTTGAGAGAAGATTCGTGGATTTTCTACTGAGGAGAGTAGATCCGATGGAGGGTAGTGTCAAATCACTAGAGTCAGCGGAAGACCTAGAAAGATTATAGGATAAACTATCAACAATGATCTATAGATTAATGAGTTGGACAGGGATATGATACATGATAGAACATTATGGCGTACTTTGATCTGACTCCACTTAGAGGGATAAGACTTGGATGTTGTTGTTTAATCGTCATGAAGAAAATGGAGTATGCTGTGGCCTGATCATGATAATGTTAAACTATGTTGAAAAAACTGTCTACAAGTTAAATTGTTTTCATGTTGTTTGTATGGACATATTTTTCTTTCTCATACAGTTAAATATGTTAACATAAAATGGATGCGTACAGATTAATACTATGAAGCACAGATACAGACGCGGACACTCCGACACCAATAATAATTTGAGAAAATGACATAATTCAGTGTAATCATAGGTGTCGGTGTCGTGTCCATGTCGGACACCGACACATGTTTGACACCGCCGCACACATAATTCGAGGAGTATCAGTGCTTCATAGGTTAAATATGTTAAAATGAAATGGATGCTTATCAACTCTATTGGCTCGGCTTGGTTTGTATACGGAGTGGGTAGGGGGCAAGTTTCGTTTTTCAAGGAACTATTTTATTTTATGATTTTATCTGCGCAATAGTTTTTTTTCCCCTCCTCATATTTGTGTTTCTTGTTATATACCCAATCAGGTCATGCACAATTCAATTGTAACTGACTTTCAAAGAATTATATGTTACAGGAAGTGGAGGCTATTCGTACTTGTATGAACCACTTTGGTGGGTGGGCATGATAACAAGTGAGTCATTCATGGTTCTATTTATTGTGAATTGATTATTGAATTGCATGCTGGTCTATATTTTCATTAAAATGTGTTTGTGCAACATCTTATTGTTTGGTGTTGGTGAACTGTATCTTTGATTTTTCTGTGCATCCCCACAAATCCTGCTTCGTTTTCAGCTTCTAGTGATTTTAGTAGTACAGAAAGTCATGTAGTTCCTATCTAAACTTGTATAATGTTAGTTCCATGCAGAACCTTAACAAATCTTAATAGGGGTGTTCTTCTGTATGTTTTTCTCTCATCGCTGTATGATTTATCATCTCTTAGCAAAAAGTCACAAGTGTACGTTAAGTTATATAAATTTTTGTTACTTATTGTCCAGATTTATTGTAGAAGGATTTTTTTTTTTTTGGCTAAAGCTTGCATCTTTTCAGCTTTTCTTTCTAATCTTCTTACTTCTGTTTTGCTTTCACACATTTTCCATGGGAATATTTCTACATTCCAATCTATGGACGCCAACAAATTATCCATGTACAACTTATTGATCTGAGTTGCATACATTTATTTATACCAACAAATGGATTAAAGTTTCAATTTTAACATTTGCTTTTTCAACAGTGATTGTCGGAGAGATTGCCAATTTTGCAGCATATGCATTTGCTCCAGCTATATTGGTCACTCCGCTTGGTGCTCTTAGCATTATTATCAGGTATGGCAATTTTAACCTTCATATTTATGCTTGACTCTTTGTAAATTCTGATTTGTGATGATGTGCTGCAGTGCTGCTCTTGCCCATATTATCTTACGGGAGAGACTACATATATTTGGAGTTCTTGGTTGCGCTTTGTGTGTTGTGGGGTCTACAACAATTGTTCTACATGCTCCTCAAGAACGGGAAATTGAATCAGTGCCAGAAGTATGGGATCTTGCTATGGATCCAGGTAGCCATGTTTCAATCTTGAAATGTTAGTCTACTCAAAATATTGCATTGTAATCTAACTACTAACCAAAAGACACAATCTTTTTTTCTGCAGCTTTTCTATTTTATGCCGCATTGGTTATAACAGCTACCTTTATTCTAGTCTTCCACTTCATTCCTCTATATGGCCAGACACACATAATGGTTTATATCGGCGTTTGTTCCCTTGTAGGCTCCCTATCGGTATGTCTCATCATCTAGTTATTGATGAATAGTCCTTGTTTTCCCCCCAGTTCTCCGTTTATTTTTTTCCTTCTTTCTGTATTTATATTGTCAGGTTCTCTTTTAATAGGTTATGAGTGTTAAAGCTCTTGGAATTGCCATAAAGTTAACTCTGTCTGGGATGAATCAGCTAATTTACCCTCAAACTTGGGTTTTTGCTCTAGTTGTAATTGTTTGTGTTCTTACCCAAATGAATTATTTAAATAAGGTATGATAGCTTTTCTTGTTTCTTGATGTTTACATTTATTGGTAATTTTTGAAGTACCTTAATGGAAAACAATACATAAAAATGATTTTTCGGTGAAAAAATAAATCAAGAAAAAATTAATCTGTAGAGAAGTAACGAATACATTATCTATTTTGCATGATGGTGAAGTTATTTTGCAGTCTGCTGTGGCAGTTATGCTATAAAGGATAATGTTTTTCTTTAAAAACTCCATGTTTTACATCATTATTTATGGAAGAGGATTAGTACATTGAAGTTGATGCCTTATATTCGAATGGCTTGCAGGTGGATAGTGAGTAGGAAGGTCTGATGATGCAAGTGTAATGAATGGTTTAATAATTTAAATGCATATAAATGCAAGTTTAGGTATCTGAGTGGTCTATGTGAAAAGCTCATTATCTCTATAGTTTCGAACTTATGTTTAGGATTACAATGTGACTTCAATATACAGTTCCTAATCCTAAATGTTTTGTGCACGGTCCTTCTACGAATTAAACTGTGTAGTAACTTTTACACATTGGTACATCTATTTTGGGTGGCTGGCTAATTCATGTGATACTTTTTTTTCTTCTTAATCAGGCACTGGATACTTTCAATACGGCAGTGGTATCTCCCATTTATTATGTTATGTTCACAACATTAACCATCGTGGCCAGTGTTATCATGTTTAAGGTAAATTTTGTTATGAGACTGGTTTATTTTTATTTTAATGACTCCGTAGCTTTTTTTACATTATCCAGATTGGTTGCTTAATTTAAAATCTGTGTTTTCTGAAGCCTATTGTCGAACTGGTTTATTTAAAGCATAAAATATCTTTCTATGTATTATGTATTATTCCATGTTTATGTTCTTCTTGCTTTTAATATAATGGCAAAATAGAAAGCTAGATATGACACATTATGGCAGAGAAGTTCAATTTTAAGATGATATTTAACGTCATTTTGTGCTATTCTTGTCACAAGATTCTTAACGATACTTATATACAGGTTGTTGGCTAGAACTACAATAGCAAACAACCAAATCCTATTTCCGCTTGGTGGAGTTGGCTAAATAAACGAAACAAATATTTCGTCGTGAATCGAGTCCAGTGTGATAGATCATGCAAATCTCAATTTCTCTGAATGGTTTGACTTATAGGCTTTCCTAATCTTCCCTCTACATGTAACTATTGTGCTATCCTCTATCGACTCTACTCCGAATTGGTGGTTTTATGGGTCTTCTTTGCTCATTTTCAAGCCAGCCCAAATCAAAACCCTACCATTTTTACTACGATTGGAGTTGCCTCAACTTTCTTTGTAATGATTTTCTCGTTCCATTTCTAGTCTTCCGCTCTATCTCTACTGTTATTCTGCTTTCTCTCTCACAACCTTTCTGCTGCTGCTCTGTCCCTATCGCGACCTCTCTACTTGAAGTGCTGCTGTTGAGCCCACATGATTTAGTGAAATTCATTTGAATTTCAACCAATAGAATAGTGTGTTTTGGGAATAGTTTTTTTTTTCTTCTTTTTTTTGACGGGGGAAGAGTGTGTTAAAGTGTGCATCACTAACACTTCTCATATTTATTTTTTGTATGAATGGAGTACTTATTTTTGGTATGATACCTAGAAGTATGTCAACCTGATTTTACTTATGTTATAGTCAAGAATCAAGCTTATCAAAGTAAGCGTGTCCCACATATATGTCATAAACTGGTTCCAAAAGAAGAGAGAGATCTTTGAGAATAAATTACCTTCTGCTGAGGCATTTACATCTAGAATGTATGAAAATTGAAAATCATGTACGTACACATACCTTCAACAGGGTGTAAAACTGCTTTCTTTTTGCTCATTTCTTAAACAAGCATGGAGACTCGCAAATCCTTTGGTACACATTAAGAATTGGTTTTATCCTTCATTTTGATTTTTTTTAAGAGGTCCTTCATTTTGATTTTTATCGTGTTCCAGGTGCAGATTCATTGGTTTAGATATTATATACATGTCAAATATCTGTCTGTCCATTGTTTGCTAATTTGAAGATTCATCTTTGACTGAATATTAAACTTGATATCAGGACTGGGATAGGCAAAGTCCAACACAAGTTATCACAGAAATATGTGGGTTTGTGACGATACTTTCAGGAACTTTTCTTCTGCACAAGACTAAGGATATGGCAGAAGGTATGCTCTAGTGATCTCATATGTTGTAATTTCACTTTACTTCAGATTTCCTTCTATTGGGCTCACAATGCACTTCCTAGTGCTGTCCTGCCATCTTAAAACATGATTATTAATGTTATCTTCTTTTACATGCTTACTAGGTTCATCTATTAGACTTAATAAGCATTCAGAAGAGGATGGCTTTGATGATGTTGAAGGGATTCCCCTTAGAAGGCAAGAATCCATGAGATCGCCATGA
Protein sequence

>MS.gene00614.t1

MASSSSSWREGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGSGGYSYLYEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGVLGCALCVVGSTTIVLHAPQEREIESVPEVWDLAMDPAFLFYAALVITATFILVFHFIPLYGQTHIMVYIGVCSLVGSLSVMSVKALGIAIKLTLSGMNQLIYPQTWVFALVVIVCVLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTIVASVIMFKDWDRQSPTQVITEICGFVTILSGTFLLHKTKDMAEGSSIRLNKHSEEDGFDDVEGIPLRRQESMRSP