AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047204

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047204.t1 MTR_2g006070 99.115 339 3 0 2 340 3 341 0.0 686
MS.gene047204.t1 MTR_2g006070 99.174 242 2 0 2 243 3 244 3.52e-174 483
MS.gene047204.t1 MTR_8g081650 70.569 299 88 0 11 309 2 300 1.43e-154 437
MS.gene047204.t1 MTR_3g083960 66.163 331 101 2 11 341 2 321 9.60e-153 432
MS.gene047204.t1 MTR_4g074050 62.752 298 111 0 14 311 4 301 1.64e-144 411
MS.gene047204.t1 MTR_5g090020 65.574 305 104 1 11 314 2 306 1.09e-143 410
MS.gene047204.t1 MTR_2g006070 99.492 197 1 0 2 198 3 199 1.75e-139 394
MS.gene047204.t1 MTR_8g095060 63.729 295 107 0 12 306 1 295 9.21e-138 395
MS.gene047204.t1 MTR_3g097220 62.799 293 109 0 13 305 3 295 4.19e-137 393
MS.gene047204.t1 MTR_3g097220 62.799 293 109 0 13 305 3 295 1.90e-136 392
MS.gene047204.t1 MTR_5g090020 64.898 245 86 0 70 314 17 261 1.70e-109 322
MS.gene047204.t1 MTR_3g097220 61.111 198 77 0 108 305 1 198 4.08e-86 260
MS.gene047204.t1 MTR_5g049870 54.545 66 26 1 249 314 166 227 3.35e-14 72.0
MS.gene047204.t1 MTR_6g033100 21.451 317 213 4 45 328 38 351 4.16e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047204.t1 AT1G71900 78.736 348 62 3 1 341 1 343 0.0 568
MS.gene047204.t1 AT1G34470 78.754 353 62 5 1 341 1 352 0.0 547
MS.gene047204.t1 AT1G71900 75.504 347 76 3 1 339 1 346 0.0 538
MS.gene047204.t1 AT4G09640 75.766 359 69 4 1 341 1 359 0.0 514
MS.gene047204.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene047204.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene047204.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene047204.t1 AT4G13800 70.064 314 93 1 10 322 2 315 2.12e-152 432
MS.gene047204.t1 AT4G38730 62.540 315 118 0 12 326 1 315 1.22e-146 417
MS.gene047204.t1 AT2G21120 59.633 327 130 1 12 336 1 327 2.67e-146 416
MS.gene047204.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene047204.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene047204.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene047204.t1 AT3G23870 70.492 305 90 0 10 314 2 306 1.51e-141 404
MS.gene047204.t1 AT4G13800 71.321 265 76 0 10 274 2 266 2.91e-128 368
MS.gene047204.t1 AT4G13800 71.321 265 76 0 10 274 2 266 2.91e-128 368
MS.gene047204.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene047204.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene047204.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene047204.t1 AT4G13800 68.908 238 74 0 10 247 2 239 2.68e-108 316
MS.gene047204.t1 AT3G23870 64.840 219 77 0 96 314 8 226 1.10e-102 302
MS.gene047204.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4
MS.gene047204.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4
MS.gene047204.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4
MS.gene047204.t1 AT3G26670 21.070 299 200 4 59 323 50 346 3.76e-12 67.4

Find 90 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGACAGAGTTAACTTTA+TGG 0.185357 2.2:+73452800 None:intergenic
CCAAATGAATTATTTAAATA+AGG 0.190611 2.2:-73452712 MS.gene047204:intron
TGTGAACATAACATAATAAA+TGG 0.201399 2.2:+73452059 None:intergenic
GGCCAGTGTTATCATGTTTA+AGG 0.207394 2.2:-73452022 MS.gene047204:intron
GTCTCTCCCGTAAGATAATA+TGG 0.212620 2.2:+73453307 None:intergenic
TCATGGATTCTTGCCTTCTA+AGG 0.229929 2.2:+73450313 None:intergenic
CTACATATATTTGGAGTTCT+TGG 0.240196 2.2:-73453285 MS.gene047204:CDS
CGGGAGAGACTACATATATT+TGG 0.245641 2.2:-73453294 MS.gene047204:CDS
AAATGCATATGCTGCAAAAT+TGG 0.267357 2.2:+73453463 None:intergenic
CCTTATTTAAATAATTCATT+TGG 0.278708 2.2:+73452712 None:intergenic
TTCCACTTCATTCCTCTATA+TGG 0.280932 2.2:-73453015 MS.gene047204:CDS
TTGAATCAGTGCCAGAAGTA+TGG 0.285857 2.2:-73453200 MS.gene047204:CDS
TGCATTTGCTCCAGCTATAT+TGG 0.303829 2.2:-73453447 MS.gene047204:CDS
GTGCTCTTAGCATTATTATC+AGG 0.309781 2.2:-73453412 MS.gene047204:intron
GCCATAAAGTTAACTCTGTC+TGG 0.320249 2.2:-73452801 MS.gene047204:CDS
GGGTTTGTGACGATACTTTC+AGG 0.333057 2.2:-73450578 MS.gene047204:CDS
ATCGGCGTTTGTTCCCTTGT+AGG 0.337139 2.2:-73452970 MS.gene047204:CDS
AGCTAATTTACCCTCAAACT+TGG 0.354302 2.2:-73452770 MS.gene047204:CDS
CTCTTGCCCATATTATCTTA+CGG 0.372307 2.2:-73453314 MS.gene047204:CDS
TTGAAGGGATTCCCCTTAGA+AGG 0.372897 2.2:-73450326 MS.gene047204:CDS
TCTTGCCCATATTATCTTAC+GGG 0.384489 2.2:-73453313 MS.gene047204:CDS
CTTATTTAAATAATTCATTT+GGG 0.394380 2.2:+73452713 None:intergenic
TCTGCACAAGACTAAGGATA+TGG 0.397502 2.2:-73450546 MS.gene047204:CDS
GTTATGAGTGTTAAAGCTCT+TGG 0.407571 2.2:-73452828 MS.gene047204:CDS
GAAGTGGAAGACTAGAATAA+AGG 0.410967 2.2:+73453029 None:intergenic
GCTAGCACCGATGAAGAAAC+TGG 0.411958 2.2:+73455339 None:intergenic
GGTTGCGCTTTGTGTGTTGT+GGG 0.447928 2.2:-73453264 MS.gene047204:CDS
CTTTCATCCAGTTTCTTCAT+CGG 0.449336 2.2:-73455346 MS.gene047204:CDS
TATAAACCATTATGTGTGTC+TGG 0.458957 2.2:+73452992 None:intergenic
CGTACTTGTATGAACCACTT+TGG 0.464077 2.2:-73454121 MS.gene047204:CDS
ACACACATAATGGTTTATAT+CGG 0.464257 2.2:-73452988 MS.gene047204:CDS
TGGTTGCGCTTTGTGTGTTG+TGG 0.474355 2.2:-73453265 MS.gene047204:CDS
ATAGCAAGATCCCATACTTC+TGG 0.477024 2.2:+73453189 None:intergenic
ATATGGCCAGACACACATAA+TGG 0.478390 2.2:-73452998 MS.gene047204:CDS
CATGGATTCTTGCCTTCTAA+GGG 0.480099 2.2:+73450314 None:intergenic
GCTAATTTACCCTCAAACTT+GGG 0.485071 2.2:-73452769 MS.gene047204:CDS
GTGAACATAACATAATAAAT+GGG 0.492015 2.2:+73452060 None:intergenic
TGGGATCTTGCTATGGATCC+AGG 0.492129 2.2:-73453180 MS.gene047204:intron
GCTATATTGGTCACTCCGCT+TGG 0.493806 2.2:-73453434 MS.gene047204:CDS
CTTGATATCAGGACTGGGAT+AGG 0.499274 2.2:-73450634 MS.gene047204:intron
TCTACATGCTCCTCAAGAAC+GGG 0.499881 2.2:-73453226 MS.gene047204:CDS
TTCCCTTGTAGGCTCCCTAT+CGG 0.502213 2.2:-73452959 MS.gene047204:intron
TGAATCAGTGCCAGAAGTAT+GGG 0.505992 2.2:-73453199 MS.gene047204:CDS
AATATATCATGGCGATCTCA+TGG 0.507463 2.2:+73450296 None:intergenic
CAAGTTATCACAGAAATATG+TGG 0.508255 2.2:-73450599 MS.gene047204:CDS
ACTTGTATGAACCACTTTGG+TGG 0.510370 2.2:-73454118 MS.gene047204:CDS
TGGCGAGTTCCTCTTCTAGT+TGG 0.513230 2.2:-73455414 MS.gene047204:CDS
GATGAAGAAACTGGATGAAA+GGG 0.513895 2.2:+73455348 None:intergenic
ATACCGATAGGGAGCCTACA+AGG 0.517647 2.2:+73452956 None:intergenic
ATTTCTGTGATAACTTGTGT+TGG 0.520381 2.2:+73450605 None:intergenic
TCTCTCCCGTAAGATAATAT+GGG 0.523037 2.2:+73453308 None:intergenic
AGCGGAGTGACCAATATAGC+TGG 0.526859 2.2:+73453437 None:intergenic
CTTGTATGAACCACTTTGGT+GGG 0.529827 2.2:-73454117 MS.gene047204:CDS
ATGTGTGTCTGGCCATATAG+AGG 0.529961 2.2:+73453003 None:intergenic
TCCTCTTCTAGTTGGCGAGA+GGG 0.533762 2.2:-73455406 MS.gene047204:CDS
GGCACTGGATACTTTCAATA+CGG 0.534954 2.2:-73452094 MS.gene047204:CDS
TTCTACATGCTCCTCAAGAA+CGG 0.536732 2.2:-73453227 MS.gene047204:CDS
GATTCAATTTCCCGTTCTTG+AGG 0.538754 2.2:+73453216 None:intergenic
TGCTCTGATTCCACTGGCAC+CGG 0.540042 2.2:+73455285 None:intergenic
TCCCTCTCGCCAACTAGAAG+AGG 0.541854 2.2:+73455405 None:intergenic
CCATAAAGTTAACTCTGTCT+GGG 0.546365 2.2:-73452800 MS.gene047204:CDS
CGATGAAGAAACTGGATGAA+AGG 0.548392 2.2:+73455347 None:intergenic
GGTGCCAGTGGAATCAGAGC+AGG 0.559422 2.2:-73455283 MS.gene047204:intron
ATGTCCTCTGATAATATCAA+AGG 0.560524 2.2:-73455382 MS.gene047204:CDS
AGAAGTATGGGATCTTGCTA+TGG 0.564419 2.2:-73453187 MS.gene047204:CDS
TACCTTAAACATGATAACAC+TGG 0.564492 2.2:+73452020 None:intergenic
GATGGCTTTGATGATGTTGA+AGG 0.564589 2.2:-73450342 MS.gene047204:CDS
TATGAACCACTTTGGTGGGT+GGG 0.572479 2.2:-73454113 MS.gene047204:CDS
AGAACCTGCTCTGATTCCAC+TGG 0.576009 2.2:+73455279 None:intergenic
ACTTAATAAGCATTCAGAAG+AGG 0.578484 2.2:-73450364 MS.gene047204:CDS
AAGTTATCACAGAAATATGT+GGG 0.587076 2.2:-73450598 MS.gene047204:CDS
AATAAGCATTCAGAAGAGGA+TGG 0.595448 2.2:-73450360 MS.gene047204:CDS
GTATGAACCACTTTGGTGGG+TGG 0.597992 2.2:-73454114 MS.gene047204:CDS
ATGGCTTTGATGATGTTGAA+GGG 0.603839 2.2:-73450341 MS.gene047204:CDS
GATGATGAGACATACCGATA+GGG 0.605404 2.2:+73452945 None:intergenic
TTCCTCTTCTAGTTGGCGAG+AGG 0.609756 2.2:-73455407 MS.gene047204:CDS
TAAACCTTTGATATTATCAG+AGG 0.611108 2.2:+73455378 None:intergenic
CATGATAACACTGGCCACGA+TGG 0.614833 2.2:+73452029 None:intergenic
GTTGCGCTTTGTGTGTTGTG+GGG 0.616455 2.2:-73453263 MS.gene047204:CDS
ATCATGCCCACCCACCAAAG+TGG 0.624074 2.2:+73454107 None:intergenic
GGCCATATAGAGGAATGAAG+TGG 0.624973 2.2:+73453013 None:intergenic
TTATATGTTACAGGAAGTGG+AGG 0.627071 2.2:-73454149 MS.gene047204:intron
AGAAACTGGATGAAAGGGCG+AGG 0.630061 2.2:+73455353 None:intergenic
GGATACTTTCAATACGGCAG+TGG 0.630256 2.2:-73452088 MS.gene047204:CDS
AAGACTAAGGATATGGCAGA+AGG 0.630919 2.2:-73450539 MS.gene047204:intron
ATGGATTCTTGCCTTCTAAG+GGG 0.654525 2.2:+73450315 None:intergenic
TACCGATAGGGAGCCTACAA+GGG 0.655917 2.2:+73452957 None:intergenic
GTTCACAACATTAACCATCG+TGG 0.718448 2.2:-73452043 MS.gene047204:CDS
GGTAGCTGTTATAACCAATG+CGG 0.739413 2.2:+73453050 None:intergenic
ATAATGCTAAGAGCACCAAG+CGG 0.786625 2.2:+73453419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTTAAATAATTCATTT+GGG + chr2.2:73453007-73453026 None:intergenic 10.0%
!! TTAAATATGTTAAAATGAAA+TGG - chr2.2:73451348-73451367 MS.gene047204:intron 10.0%
!! TTAAATATGTTAACATAAAA+TGG - chr2.2:73451143-73451162 MS.gene047204:intron 10.0%
!!! AATACATAAAAATGATTTTT+CGG - chr2.2:73453097-73453116 MS.gene047204:intron 10.0%
!! ATAAATAATGATGTAAAACA+TGG + chr2.2:73453258-73453277 None:intergenic 15.0%
!! CCAAATGAATTATTTAAATA+AGG - chr2.2:73453005-73453024 MS.gene047204:CDS 15.0%
!! CTTAAAAAAAATCAAAATGA+AGG + chr2.2:73454935-73454954 None:intergenic 15.0%
!!! ATGTTTTACATCATTATTTA+TGG - chr2.2:73453257-73453276 MS.gene047204:CDS 15.0%
!!! CCTTATTTAAATAATTCATT+TGG + chr2.2:73453008-73453027 None:intergenic 15.0%
!!! TCATTTTCTCAAATTATTAT+TGG + chr2.2:73451222-73451241 None:intergenic 15.0%
!!! TCATTTTGATTTTTTTTAAG+AGG - chr2.2:73454935-73454954 MS.gene047204:intron 15.0%
!!! TTAATAATCATGTTTTAAGA+TGG + chr2.2:73455293-73455312 None:intergenic 15.0%
!!! TTTTTTCTTCTTTTTTTTGA+CGG - chr2.2:73454538-73454557 MS.gene047204:intron 15.0%
!! AACATTATACAAGTTTAGAT+AGG + chr2.2:73451840-73451859 None:intergenic 20.0%
!! AACCTTAACAAATCTTAATA+GGG - chr2.2:73451872-73451891 MS.gene047204:intron 20.0%
!! ACAATATAAATACAGAAAGA+AGG + chr2.2:73452851-73452870 None:intergenic 20.0%
!! ACTATAACATAAGTAAAATC+AGG + chr2.2:73454664-73454683 None:intergenic 20.0%
!! AGCTTCATTGTTAAAAAAAA+GGG - chr2.2:73450398-73450417 MS.gene047204:intron 20.0%
!! GAAAGAAGGAAAAAAATAAA+CGG + chr2.2:73452837-73452856 None:intergenic 20.0%
!! GTGAACATAACATAATAAAT+GGG + chr2.2:73453660-73453679 None:intergenic 20.0%
!! TAGCTTCATTGTTAAAAAAA+AGG - chr2.2:73450397-73450416 MS.gene047204:intron 20.0%
!! TGAATATTAAACTTGATATC+AGG - chr2.2:73455072-73455091 MS.gene047204:intron 20.0%
!! TGTGAACATAACATAATAAA+TGG + chr2.2:73453661-73453680 None:intergenic 20.0%
!! TTCAAAGAATTATATGTTAC+AGG - chr2.2:73451559-73451578 MS.gene047204:intron 20.0%
!! TTCTTGATGTTTACATTTAT+TGG - chr2.2:73453046-73453065 MS.gene047204:CDS 20.0%
!!! ACTTTTTTTTCTTCTTAATC+AGG - chr2.2:73453602-73453621 MS.gene047204:intron 20.0%
!!! GTTTTTACCTTTTCTTTAAT+GGG - chr2.2:73450588-73450607 MS.gene047204:CDS 20.0%
!!! TAATTTTTGAAGTACCTTAA+TGG - chr2.2:73453069-73453088 MS.gene047204:intron 20.0%
!!! TCTTCTTGCTTTTAATATAA+TGG - chr2.2:73453893-73453912 MS.gene047204:intron 20.0%
!!! TGTAGAAGGATTTTTTTTTT+TGG - chr2.2:73452008-73452027 MS.gene047204:intron 20.0%
!!! TTATGTATTGTTTTCCATTA+AGG + chr2.2:73453086-73453105 None:intergenic 20.0%
!!! TTTTTCTTCTTTTTTTTGAC+GGG - chr2.2:73454539-73454558 MS.gene047204:intron 20.0%
!!! TTTTTTTACATTATCCAGAT+TGG - chr2.2:73453767-73453786 MS.gene047204:intron 20.0%
! AAAAAAATAAACGGAGAACT+GGG + chr2.2:73452828-73452847 None:intergenic 25.0%
! AAAGTTACCCATTAAAGAAA+AGG + chr2.2:73450598-73450617 None:intergenic 25.0%
! AAATCCTTCTACAATAAATC+TGG + chr2.2:73452001-73452020 None:intergenic 25.0%
! AACATTTCAAGATTGAAACA+TGG + chr2.2:73452566-73452585 None:intergenic 25.0%
! AAGTTATCACAGAAATATGT+GGG - chr2.2:73455119-73455138 MS.gene047204:intron 25.0%
! AATCATTACAAAGAAAGTTG+AGG + chr2.2:73454329-73454348 None:intergenic 25.0%
! ACACACATAATGGTTTATAT+CGG - chr2.2:73452729-73452748 MS.gene047204:CDS 25.0%
! ACATAATTCAGTGTAATCAT+AGG - chr2.2:73451241-73451260 MS.gene047204:intron 25.0%
! ACCTTAACAAATCTTAATAG+GGG - chr2.2:73451873-73451892 MS.gene047204:intron 25.0%
! AGTTTAACATTATCATGATC+AGG + chr2.2:73451049-73451068 None:intergenic 25.0%
! ATAGTTTCGAACTTATGTTT+AGG - chr2.2:73453448-73453467 MS.gene047204:CDS 25.0%
! ATCTTCAAATTAGCAAACAA+TGG + chr2.2:73455041-73455060 None:intergenic 25.0%
! ATGAATTTCACTAAATCATG+TGG + chr2.2:73454474-73454493 None:intergenic 25.0%
! ATGCATATAAATGCAAGTTT+AGG - chr2.2:73453389-73453408 MS.gene047204:intron 25.0%
! CAAACAGTTAAAAGATGAAA+AGG + chr2.2:73450655-73450674 None:intergenic 25.0%
! CAACTTTCATAAAATTGGAT+TGG - chr2.2:73450522-73450541 MS.gene047204:intron 25.0%
! CACGATAAAAATCAAAATGA+AGG + chr2.2:73454962-73454981 None:intergenic 25.0%
! CATTTATTGATACCAACAAA+TGG - chr2.2:73452176-73452195 MS.gene047204:intron 25.0%
! CTTTCTGTATTTATATTGTC+AGG - chr2.2:73452852-73452871 MS.gene047204:intron 25.0%
! GAACCTTAACAAATCTTAAT+AGG - chr2.2:73451871-73451890 MS.gene047204:intron 25.0%
! GACTTCAACTTTCATAAAAT+TGG - chr2.2:73450517-73450536 MS.gene047204:intron 25.0%
! GGATAATGTAAAAAAAGCTA+CGG + chr2.2:73453763-73453782 None:intergenic 25.0%
! GTTTATCCTATAATCTTTCT+AGG + chr2.2:73450878-73450897 None:intergenic 25.0%
! TAAACCTTTGATATTATCAG+AGG + chr2.2:73450342-73450361 None:intergenic 25.0%
! TAAATTAAGCTTACTCGTTT+AGG + chr2.2:73450693-73450712 None:intergenic 25.0%
! TAACAAGAAACACAAATATG+AGG + chr2.2:73451498-73451517 None:intergenic 25.0%
! TACATCATTATTTATGGAAG+AGG - chr2.2:73453263-73453282 MS.gene047204:CDS 25.0%
! TCTCAAATTATTATTGGTGT+CGG + chr2.2:73451216-73451235 None:intergenic 25.0%
! TCTTAACGATACTTATATAC+AGG - chr2.2:73454009-73454028 MS.gene047204:intron 25.0%
! TGAAACTTTAATCCATTTGT+TGG + chr2.2:73452191-73452210 None:intergenic 25.0%
! TGAATTTCACTAAATCATGT+GGG + chr2.2:73454473-73454492 None:intergenic 25.0%
! TGATCTATAGATTAATGAGT+TGG - chr2.2:73450907-73450926 MS.gene047204:intron 25.0%
! TTTAAATTAAGCAACCAATC+TGG + chr2.2:73453784-73453803 None:intergenic 25.0%
! TTTAATCGTCATGAAGAAAA+TGG - chr2.2:73451011-73451030 MS.gene047204:intron 25.0%
!! ACATTATCTATTTTGCATGA+TGG - chr2.2:73453167-73453186 MS.gene047204:intron 25.0%
!! GAAAAAAAGATTGTGTCTTT+TGG + chr2.2:73452627-73452646 None:intergenic 25.0%
!! GGTTTTTACCTTTTCTTTAA+TGG - chr2.2:73450587-73450606 MS.gene047204:CDS 25.0%
!! TATTTCTACATTCCAATCTA+TGG - chr2.2:73452107-73452126 MS.gene047204:intron 25.0%
!! TTCATAAAATTGGATTGGAT+TGG - chr2.2:73450527-73450546 MS.gene047204:intron 25.0%
!!! ACTTTAACTGTTTTTCAAAC+TGG - chr2.2:73450613-73450632 MS.gene047204:CDS 25.0%
!!! ATGAATGGAGTACTTATTTT+TGG - chr2.2:73454615-73454634 MS.gene047204:intron 25.0%
!!! CTTAAGATCTGCATTTTTTT+GGG - chr2.2:73450565-73450584 MS.gene047204:CDS 25.0%
!!! TTAAGATCTGCATTTTTTTG+GGG - chr2.2:73450566-73450585 MS.gene047204:CDS 25.0%
!!! TTGTTTTCATGTTGTTTGTA+TGG - chr2.2:73451097-73451116 MS.gene047204:intron 25.0%
!!! TTTTCTTCTTTTTTTTGACG+GGG - chr2.2:73454540-73454559 MS.gene047204:intron 25.0%
!!! TTTTGTTGTGCTATTTGATA+TGG - chr2.2:73450775-73450794 MS.gene047204:intron 25.0%
AAAAAATAAACGGAGAACTG+GGG + chr2.2:73452827-73452846 None:intergenic 30.0%
AAAAAGGGTTTGAAAAAAGC+CGG - chr2.2:73450413-73450432 MS.gene047204:intron 30.0%
AAATAAACCAGTTCGACAAT+AGG + chr2.2:73453824-73453843 None:intergenic 30.0%
AAATGCATATGCTGCAAAAT+TGG + chr2.2:73452257-73452276 None:intergenic 30.0%
AACTCCAATCGTAGTAAAAA+TGG + chr2.2:73454305-73454324 None:intergenic 30.0%
AAGAAACACAAATATGAGGA+GGG + chr2.2:73451494-73451513 None:intergenic 30.0%
AAGCAAGAAGAACATAAACA+TGG + chr2.2:73453884-73453903 None:intergenic 30.0%
AAGCTAGATATGACACATTA+TGG - chr2.2:73453925-73453944 MS.gene047204:intron 30.0%
ACCAGTTTATGACATATATG+TGG + chr2.2:73454718-73454737 None:intergenic 30.0%
ACTTAATAAGCATTCAGAAG+AGG - chr2.2:73455353-73455372 MS.gene047204:CDS 30.0%
ACTTCAGATTTCCTTCTATT+GGG - chr2.2:73455238-73455257 MS.gene047204:intron 30.0%
AGAGTCAAGCATAAATATGA+AGG + chr2.2:73452345-73452364 None:intergenic 30.0%
AGTTAAAAGATGAAAAGGCT+TGG + chr2.2:73450650-73450669 None:intergenic 30.0%
ATGTCCTCTGATAATATCAA+AGG - chr2.2:73450335-73450354 MS.gene047204:CDS 30.0%
ATTAAACTTGATATCAGGAC+TGG - chr2.2:73455077-73455096 MS.gene047204:intron 30.0%
CAAATCTCAATTTCTCTGAA+TGG - chr2.2:73454147-73454166 MS.gene047204:intron 30.0%
CAAGTTATCACAGAAATATG+TGG - chr2.2:73455118-73455137 MS.gene047204:intron 30.0%
CAATCGTAGTAAAAATGGTA+GGG + chr2.2:73454300-73454319 None:intergenic 30.0%
CAATTCTTAATGTGTACCAA+AGG + chr2.2:73454905-73454924 None:intergenic 30.0%
CCAGTTTATGACATATATGT+GGG + chr2.2:73454717-73454736 None:intergenic 30.0%
CTTAGCATTATTATCAGGTA+TGG - chr2.2:73452310-73452329 MS.gene047204:intron 30.0%
CTTTGGTACACATTAAGAAT+TGG - chr2.2:73454903-73454922 MS.gene047204:intron 30.0%
GAAAAAAATAAACGGAGAAC+TGG + chr2.2:73452829-73452848 None:intergenic 30.0%
GAATTATATGTTACAGGAAG+TGG - chr2.2:73451565-73451584 MS.gene047204:intron 30.0%
GATACTTATATACAGGTTGT+TGG - chr2.2:73454016-73454035 MS.gene047204:intron 30.0%
TACACAGTTTAATTCGTAGA+AGG + chr2.2:73453528-73453547 None:intergenic 30.0%
TACCTTAAACATGATAACAC+TGG + chr2.2:73453700-73453719 None:intergenic 30.0%
TACTTCAGATTTCCTTCTAT+TGG - chr2.2:73455237-73455256 MS.gene047204:intron 30.0%
TATAAACCATTATGTGTGTC+TGG + chr2.2:73452728-73452747 None:intergenic 30.0%
TCAGATCAATAAGTTGTACA+TGG + chr2.2:73452148-73452167 None:intergenic 30.0%
TGGTACATGATAGAACATTA+TGG - chr2.2:73450939-73450958 MS.gene047204:intron 30.0%
TTAAACTTGATATCAGGACT+GGG - chr2.2:73455078-73455097 MS.gene047204:intron 30.0%
TTCAGTGCAACAAACTAATT+GGG - chr2.2:73450719-73450738 MS.gene047204:intron 30.0%
TTGTCCAGATTTATTGTAGA+AGG - chr2.2:73451994-73452013 MS.gene047204:intron 30.0%
TTGTGCAACATCTTATTGTT+TGG - chr2.2:73451715-73451734 MS.gene047204:intron 30.0%
TTTCAGTGCAACAAACTAAT+TGG - chr2.2:73450718-73450737 MS.gene047204:intron 30.0%
! AATCCTAAATGTTTTGTGCA+CGG - chr2.2:73453501-73453520 MS.gene047204:intron 30.0%
! ACACATTGGTACATCTATTT+TGG - chr2.2:73453557-73453576 MS.gene047204:intron 30.0%
! ACCAATAGAATAGTGTGTTT+TGG - chr2.2:73454504-73454523 MS.gene047204:intron 30.0%
! ATAGATTAATGAGTTGGACA+GGG - chr2.2:73450913-73450932 MS.gene047204:intron 30.0%
! ATTTCTGTGATAACTTGTGT+TGG + chr2.2:73455115-73455134 None:intergenic 30.0%
! CACATTGGTACATCTATTTT+GGG - chr2.2:73453558-73453577 MS.gene047204:intron 30.0%
! CCAATAGAATAGTGTGTTTT+GGG - chr2.2:73454505-73454524 MS.gene047204:intron 30.0%
! CTACATATATTTGGAGTTCT+TGG - chr2.2:73452432-73452451 MS.gene047204:intron 30.0%
! GTGTAGTAACTTTTACACAT+TGG - chr2.2:73453543-73453562 MS.gene047204:intron 30.0%
! GTTGTACATGGATAATTTGT+TGG + chr2.2:73452136-73452155 None:intergenic 30.0%
! TATAGATTAATGAGTTGGAC+AGG - chr2.2:73450912-73450931 MS.gene047204:intron 30.0%
! TCTTCTTTTACATGCTTACT+AGG - chr2.2:73455318-73455337 MS.gene047204:CDS 30.0%
! TGCACAAAACATTTAGGATT+AGG + chr2.2:73453501-73453520 None:intergenic 30.0%
! TTCTTGTTATATACCCAATC+AGG - chr2.2:73451509-73451528 MS.gene047204:intron 30.0%
! TTGGATTGGATTGGATTATT+AGG - chr2.2:73450536-73450555 MS.gene047204:intron 30.0%
! TTGTCAGGTTCTCTTTTAAT+AGG - chr2.2:73452867-73452886 MS.gene047204:intron 30.0%
! TTTTCTATTTTATGCCGCAT+TGG - chr2.2:73452653-73452672 MS.gene047204:intron 30.0%
!! AACATCTTATTGTTTGGTGT+TGG - chr2.2:73451721-73451740 MS.gene047204:intron 30.0%
!! ACCCCTATTAAGATTTGTTA+AGG + chr2.2:73451877-73451896 None:intergenic 30.0%
!! GGTAAATTTTGTTATGAGAC+TGG - chr2.2:73453716-73453735 MS.gene047204:intron 30.0%
!! TTAGTTTGTTGCACTGAAAA+TGG + chr2.2:73450717-73450736 None:intergenic 30.0%
!! TTTGATTTTTATCGTGTTCC+AGG - chr2.2:73454966-73454985 MS.gene047204:intron 30.0%
!!! AAAATGGTAGGGTTTTGATT+TGG + chr2.2:73454289-73454308 None:intergenic 30.0%
!!! AAATGGTAGGGTTTTGATTT+GGG + chr2.2:73454288-73454307 None:intergenic 30.0%
!!! GCTTAAGATCTGCATTTTTT+TGG - chr2.2:73450564-73450583 MS.gene047204:CDS 30.0%
!!! TAATCATGTTTTAAGATGGC+AGG + chr2.2:73455289-73455308 None:intergenic 30.0%
!!! TTTCTTCTTTTTTTTGACGG+GGG - chr2.2:73454541-73454560 MS.gene047204:intron 30.0%
AAAAATAAACGGAGAACTGG+GGG + chr2.2:73452826-73452845 None:intergenic 35.0%
AATAAGCATTCAGAAGAGGA+TGG - chr2.2:73455357-73455376 MS.gene047204:CDS 35.0%
AGAAACACAAATATGAGGAG+GGG + chr2.2:73451493-73451512 None:intergenic 35.0%
AGCACAATAGTTACATGTAG+AGG + chr2.2:73454200-73454219 None:intergenic 35.0%
AGCTAATTTACCCTCAAACT+TGG - chr2.2:73452947-73452966 MS.gene047204:intron 35.0%
ATTTGCATGATCTATCACAC+TGG + chr2.2:73454132-73454151 None:intergenic 35.0%
CAAGAAACACAAATATGAGG+AGG + chr2.2:73451495-73451514 None:intergenic 35.0%
CCAATCGTAGTAAAAATGGT+AGG + chr2.2:73454301-73454320 None:intergenic 35.0%
CCATAAAGTTAACTCTGTCT+GGG - chr2.2:73452917-73452936 MS.gene047204:intron 35.0%
CCCAAAACACACTATTCTAT+TGG + chr2.2:73454508-73454527 None:intergenic 35.0%
CCCACATATATGTCATAAAC+TGG - chr2.2:73454714-73454733 MS.gene047204:intron 35.0%
CTCTTGCCCATATTATCTTA+CGG - chr2.2:73452403-73452422 MS.gene047204:intron 35.0%
CTTTCATCCAGTTTCTTCAT+CGG - chr2.2:73450371-73450390 MS.gene047204:CDS 35.0%
GAAGTGGAAGACTAGAATAA+AGG + chr2.2:73452691-73452710 None:intergenic 35.0%
GAATAAATTACCTTCTGCTG+AGG - chr2.2:73454763-73454782 MS.gene047204:intron 35.0%
GAATAACAGTAGAGATAGAG+CGG + chr2.2:73454374-73454393 None:intergenic 35.0%
GATAACAAGTGAGTCATTCA+TGG - chr2.2:73451630-73451649 MS.gene047204:intron 35.0%
GATGAAGAAACTGGATGAAA+GGG + chr2.2:73450372-73450391 None:intergenic 35.0%
GATGATGCAAGTGTAATGAA+TGG - chr2.2:73453353-73453372 MS.gene047204:intron 35.0%
GCACAATAGTTACATGTAGA+GGG + chr2.2:73454199-73454218 None:intergenic 35.0%
GCTAATTTACCCTCAAACTT+GGG - chr2.2:73452948-73452967 MS.gene047204:intron 35.0%
GCTCATTTCTTAAACAAGCA+TGG - chr2.2:73454867-73454886 MS.gene047204:intron 35.0%
GGAAGACCTAGAAAGATTAT+AGG - chr2.2:73450869-73450888 MS.gene047204:intron 35.0%
GGAATGTAGAAATATTCCCA+TGG + chr2.2:73452101-73452120 None:intergenic 35.0%
GTGCTCTTAGCATTATTATC+AGG - chr2.2:73452305-73452324 MS.gene047204:intron 35.0%
GTTATGAGTGTTAAAGCTCT+TGG - chr2.2:73452889-73452908 MS.gene047204:intron 35.0%
GTTGATGCCTTATATTCGAA+TGG - chr2.2:73453300-73453319 MS.gene047204:CDS 35.0%
TAATGAAATGAAGCAGCAAG+TGG + chr2.2:73450479-73450498 None:intergenic 35.0%
TCTCTCCCGTAAGATAATAT+GGG + chr2.2:73452412-73452431 None:intergenic 35.0%
TCTTGCCCATATTATCTTAC+GGG - chr2.2:73452404-73452423 MS.gene047204:intron 35.0%
TGGATGCTTATCAACTCTAT+TGG - chr2.2:73451368-73451387 MS.gene047204:intron 35.0%
TTACATGTAGAGGGAAGATT+AGG + chr2.2:73454190-73454209 None:intergenic 35.0%
TTATATGTTACAGGAAGTGG+AGG - chr2.2:73451568-73451587 MS.gene047204:intron 35.0%
TTCAGTGTAATCATAGGTGT+CGG - chr2.2:73451247-73451266 MS.gene047204:intron 35.0%
TTCCACTTCATTCCTCTATA+TGG - chr2.2:73452702-73452721 MS.gene047204:intron 35.0%
TTTGATATGGAGAAGATTCG+TGG - chr2.2:73450788-73450807 MS.gene047204:intron 35.0%
! AACACTTGTGACTTTTTGCT+AGG + chr2.2:73451945-73451964 None:intergenic 35.0%
! CAAAGATCTCTCTCTTCTTT+TGG + chr2.2:73454742-73454761 None:intergenic 35.0%
! CTCTGAATGGTTTGACTTAT+AGG - chr2.2:73454160-73454179 MS.gene047204:intron 35.0%
! TGCTTTCACACATTTTCCAT+GGG - chr2.2:73452082-73452101 MS.gene047204:CDS 35.0%
! TTGCTTTCACACATTTTCCA+TGG - chr2.2:73452081-73452100 MS.gene047204:CDS 35.0%
! TTTTCTTCTGCACAAGACTA+AGG - chr2.2:73455165-73455184 MS.gene047204:intron 35.0%
! TTTTCTTCTTAATCAGGCAC+TGG - chr2.2:73453608-73453627 MS.gene047204:intron 35.0%
!! AATCAGGTTGACATACTTCT+AGG + chr2.2:73454648-73454667 None:intergenic 35.0%
!! AGATTTGTTAAGGTTCTGCA+TGG + chr2.2:73451867-73451886 None:intergenic 35.0%
!! ATGGCTTTGATGATGTTGAA+GGG - chr2.2:73455376-73455395 MS.gene047204:CDS 35.0%
!! ATTGGTACATCTATTTTGGG+TGG - chr2.2:73453561-73453580 MS.gene047204:intron 35.0%
!! CCTACCATTTTTACTACGAT+TGG - chr2.2:73454298-73454317 MS.gene047204:intron 35.0%
!!! GCTTTTTCAACAGTGATTGT+CGG - chr2.2:73452223-73452242 MS.gene047204:intron 35.0%
AAAACGAAGCAGGATTTGTG+GGG + chr2.2:73451776-73451795 None:intergenic 40.0%
AAAATAAACGGAGAACTGGG+GGG + chr2.2:73452825-73452844 None:intergenic 40.0%
AACCAAATCCTATTTCCGCT+TGG - chr2.2:73454059-73454078 MS.gene047204:intron 40.0%
AAGACTAAGGATATGGCAGA+AGG - chr2.2:73455178-73455197 MS.gene047204:intron 40.0%
AAGATTGAAACATGGCTACC+TGG + chr2.2:73452558-73452577 None:intergenic 40.0%
ACGTACACATACCTTCAACA+GGG - chr2.2:73454824-73454843 MS.gene047204:intron 40.0%
ACTTGTATGAACCACTTTGG+TGG - chr2.2:73451599-73451618 MS.gene047204:intron 40.0%
AGAGCAAAAACCCAAGTTTG+AGG + chr2.2:73452961-73452980 None:intergenic 40.0%
AGATGATGAGACATACCGAT+AGG + chr2.2:73452776-73452795 None:intergenic 40.0%
ATAGAGCGGAAGACTAGAAA+TGG + chr2.2:73454360-73454379 None:intergenic 40.0%
ATAGCAAGATCCCATACTTC+TGG + chr2.2:73452531-73452550 None:intergenic 40.0%
ATATGGCCAGACACACATAA+TGG - chr2.2:73452719-73452738 MS.gene047204:CDS 40.0%
ATGGATTCTTGCCTTCTAAG+GGG + chr2.2:73455405-73455424 None:intergenic 40.0%
CATGGATTCTTGCCTTCTAA+GGG + chr2.2:73455406-73455425 None:intergenic 40.0%
CCCAGACAGAGTTAACTTTA+TGG + chr2.2:73452920-73452939 None:intergenic 40.0%
CGATGAAGAAACTGGATGAA+AGG + chr2.2:73450373-73450392 None:intergenic 40.0%
CGGGAGAGACTACATATATT+TGG - chr2.2:73452423-73452442 MS.gene047204:intron 40.0%
CGTACTTGTATGAACCACTT+TGG - chr2.2:73451596-73451615 MS.gene047204:intron 40.0%
CTGCAAGCCATTCGAATATA+AGG + chr2.2:73453310-73453329 None:intergenic 40.0%
CTGTGGCAGTTATGCTATAA+AGG - chr2.2:73453210-73453229 MS.gene047204:CDS 40.0%
CTTGTATGAACCACTTTGGT+GGG - chr2.2:73451600-73451619 MS.gene047204:intron 40.0%
GAAAACGAAGCAGGATTTGT+GGG + chr2.2:73451777-73451796 None:intergenic 40.0%
GAAGAAAATGGAGTATGCTG+TGG - chr2.2:73451023-73451042 MS.gene047204:intron 40.0%
GAATTGTGCATGACCTGATT+GGG + chr2.2:73451525-73451544 None:intergenic 40.0%
GACCCATAAAACCACCAATT+CGG + chr2.2:73454242-73454261 None:intergenic 40.0%
GAGCAAAAACCCAAGTTTGA+GGG + chr2.2:73452960-73452979 None:intergenic 40.0%
GATGATGAGACATACCGATA+GGG + chr2.2:73452775-73452794 None:intergenic 40.0%
GATTCAATTTCCCGTTCTTG+AGG + chr2.2:73452504-73452523 None:intergenic 40.0%
GCCATAAAGTTAACTCTGTC+TGG - chr2.2:73452916-73452935 MS.gene047204:intron 40.0%
GGCCAGTGTTATCATGTTTA+AGG - chr2.2:73453695-73453714 MS.gene047204:intron 40.0%
GGTAGCTGTTATAACCAATG+CGG + chr2.2:73452670-73452689 None:intergenic 40.0%
GTCTCTCCCGTAAGATAATA+TGG + chr2.2:73452413-73452432 None:intergenic 40.0%
GTTCACAACATTAACCATCG+TGG - chr2.2:73453674-73453693 MS.gene047204:intron 40.0%
TAAACCAATGAATCTGCACC+TGG + chr2.2:73454987-73455006 None:intergenic 40.0%
TACGTACACATACCTTCAAC+AGG - chr2.2:73454823-73454842 MS.gene047204:intron 40.0%
TACTCCTCGAATTATGTGTG+CGG + chr2.2:73451313-73451332 None:intergenic 40.0%
TCATGGATTCTTGCCTTCTA+AGG + chr2.2:73455407-73455426 None:intergenic 40.0%
TCTGCACAAGACTAAGGATA+TGG - chr2.2:73455171-73455190 MS.gene047204:intron 40.0%
TGAAAACGAAGCAGGATTTG+TGG + chr2.2:73451778-73451797 None:intergenic 40.0%
TGAATTGTGCATGACCTGAT+TGG + chr2.2:73451526-73451545 None:intergenic 40.0%
TGCAAGTTTAGGTATCTGAG+TGG - chr2.2:73453400-73453419 MS.gene047204:intron 40.0%
TGCATTTGCTCCAGCTATAT+TGG - chr2.2:73452270-73452289 MS.gene047204:intron 40.0%
TTCTACATGCTCCTCAAGAA+CGG - chr2.2:73452490-73452509 MS.gene047204:intron 40.0%
TTGAATCAGTGCCAGAAGTA+TGG - chr2.2:73452517-73452536 MS.gene047204:intron 40.0%
TTGATCTGACTCCACTTAGA+GGG - chr2.2:73450968-73450987 MS.gene047204:intron 40.0%
TTTGATCTGACTCCACTTAG+AGG - chr2.2:73450967-73450986 MS.gene047204:intron 40.0%
! AGAAGTATGGGATCTTGCTA+TGG - chr2.2:73452530-73452549 MS.gene047204:intron 40.0%
! ATTTGTTGGCGTCCATAGAT+TGG + chr2.2:73452122-73452141 None:intergenic 40.0%
! CTTATATTCGAATGGCTTGC+AGG - chr2.2:73453308-73453327 MS.gene047204:CDS 40.0%
! GATTCGTGGATTTTCTACTG+AGG - chr2.2:73450802-73450821 MS.gene047204:intron 40.0%
! GCTTATCAACTCTATTGGCT+CGG - chr2.2:73451373-73451392 MS.gene047204:intron 40.0%
! GGCACTGGATACTTTCAATA+CGG - chr2.2:73453623-73453642 MS.gene047204:intron 40.0%
! TAATGAGTTGGACAGGGATA+TGG - chr2.2:73450919-73450938 MS.gene047204:intron 40.0%
! TGAATCAGTGCCAGAAGTAT+GGG - chr2.2:73452518-73452537 MS.gene047204:intron 40.0%
!! ACTCCGAATTGGTGGTTTTA+TGG - chr2.2:73454236-73454255 MS.gene047204:intron 40.0%
!! AGTTATTTTGCAGTCTGCTG+TGG - chr2.2:73453193-73453212 MS.gene047204:CDS 40.0%
!! ATAATGCTAAGAGCACCAAG+CGG + chr2.2:73452301-73452320 None:intergenic 40.0%
!! GATGGCTTTGATGATGTTGA+AGG - chr2.2:73455375-73455394 MS.gene047204:CDS 40.0%
!!! CTCCGAATTGGTGGTTTTAT+GGG - chr2.2:73454237-73454256 MS.gene047204:intron 40.0%
ATGAAGCACAGATACAGACG+CGG - chr2.2:73451185-73451204 MS.gene047204:intron 45.0%
ATGGAGACTCGCAAATCCTT+TGG - chr2.2:73454886-73454905 MS.gene047204:intron 45.0%
ATGTGTGTCTGGCCATATAG+AGG + chr2.2:73452717-73452736 None:intergenic 45.0%
ATTCGGAGTAGAGTCGATAG+AGG + chr2.2:73454225-73454244 None:intergenic 45.0%
ATTTAGCCAACTCCACCAAG+CGG + chr2.2:73454077-73454096 None:intergenic 45.0%
CAAATCCTATTTCCGCTTGG+TGG - chr2.2:73454062-73454081 MS.gene047204:intron 45.0%
CACCAAGCGGAAATAGGATT+TGG + chr2.2:73454064-73454083 None:intergenic 45.0%
CCACTTAGAGGGATAAGACT+TGG - chr2.2:73450979-73450998 MS.gene047204:intron 45.0%
CTAGAAGCTGAAAACGAAGC+AGG + chr2.2:73451786-73451805 None:intergenic 45.0%
CTTGATATCAGGACTGGGAT+AGG - chr2.2:73455083-73455102 MS.gene047204:intron 45.0%
GATGTAAATGCCTCAGCAGA+AGG + chr2.2:73454776-73454795 None:intergenic 45.0%
GATTTGACACTACCCTCCAT+CGG + chr2.2:73450837-73450856 None:intergenic 45.0%
GGACCGTGCACAAAACATTT+AGG + chr2.2:73453507-73453526 None:intergenic 45.0%
GGATACTTTCAATACGGCAG+TGG - chr2.2:73453629-73453648 MS.gene047204:intron 45.0%
GGCCATATAGAGGAATGAAG+TGG + chr2.2:73452707-73452726 None:intergenic 45.0%
GGGTAGTGTCAAATCACTAG+AGG - chr2.2:73450842-73450861 MS.gene047204:intron 45.0%
GGGTTTGTGACGATACTTTC+AGG - chr2.2:73455139-73455158 MS.gene047204:intron 45.0%
GTTTGTATACGGAGTGGGTA+GGG - chr2.2:73451400-73451419 MS.gene047204:intron 45.0%
TCTACATGCTCCTCAAGAAC+GGG - chr2.2:73452491-73452510 MS.gene047204:intron 45.0%
TGCATTGTGAGCCCAATAGA+AGG + chr2.2:73455252-73455271 None:intergenic 45.0%
TGTCAAATCACTAGAGGCAG+AGG - chr2.2:73450848-73450867 MS.gene047204:intron 45.0%
TGTTCCAGGTGCAGATTCAT+TGG - chr2.2:73454980-73454999 MS.gene047204:intron 45.0%
TTGAAGGGATTCCCCTTAGA+AGG - chr2.2:73455391-73455410 MS.gene047204:CDS 45.0%
TTTGTATACGGAGTGGGTAG+GGG - chr2.2:73451401-73451420 MS.gene047204:intron 45.0%
! ATATTCGAATGGCTTGCAGG+TGG - chr2.2:73453311-73453330 MS.gene047204:CDS 45.0%
! CCAAGTCTTATCCCTCTAAG+TGG + chr2.2:73450982-73451001 None:intergenic 45.0%
! GCAGTTTTACACCCTGTTGA+AGG + chr2.2:73454838-73454857 None:intergenic 45.0%
! TATGAACCACTTTGGTGGGT+GGG - chr2.2:73451604-73451623 MS.gene047204:intron 45.0%
! TCTGAAGCCTATTGTCGAAC+TGG - chr2.2:73453814-73453833 MS.gene047204:intron 45.0%
!! CTATCGACTCTACTCCGAAT+TGG - chr2.2:73454225-73454244 MS.gene047204:intron 45.0%
!! GAGGAGTATCAGTGCTTCAT+AGG - chr2.2:73451325-73451344 MS.gene047204:intron 45.0%
!! GCTTGGTTTGTATACGGAGT+GGG - chr2.2:73451395-73451414 MS.gene047204:intron 45.0%
!! GGGGCAAGTTTCGTTTTTCA+AGG - chr2.2:73451421-73451440 MS.gene047204:intron 45.0%
!! GTACATCTATTTTGGGTGGC+TGG - chr2.2:73453565-73453584 MS.gene047204:intron 45.0%
ACTGAGGAGAGTAGATCCGA+TGG - chr2.2:73450818-73450837 MS.gene047204:intron 50.0%
AGAAACTGGATGAAAGGGCG+AGG + chr2.2:73450367-73450386 None:intergenic 50.0%
AGAACCTGCTCTGATTCCAC+TGG + chr2.2:73450441-73450460 None:intergenic 50.0%
AGCAGCAGAAAGGTTGTGAG+AGG + chr2.2:73454404-73454423 None:intergenic 50.0%
AGCGGAGTGACCAATATAGC+TGG + chr2.2:73452283-73452302 None:intergenic 50.0%
AGGAGAGTAGATCCGATGGA+GGG - chr2.2:73450822-73450841 MS.gene047204:intron 50.0%
ATACCGATAGGGAGCCTACA+AGG + chr2.2:73452764-73452783 None:intergenic 50.0%
ATCGGCGTTTGTTCCCTTGT+AGG - chr2.2:73452747-73452766 MS.gene047204:CDS 50.0%
CAACTCCACCAAGCGGAAAT+AGG + chr2.2:73454070-73454089 None:intergenic 50.0%
CAAGTAGAGAGGTCGCGATA+GGG + chr2.2:73454434-73454453 None:intergenic 50.0%
CAGCAGCACTTCAAGTAGAG+AGG + chr2.2:73454445-73454464 None:intergenic 50.0%
CAGGTGGATAGTGAGTAGGA+AGG - chr2.2:73453327-73453346 MS.gene047204:intron 50.0%
CATGATAACACTGGCCACGA+TGG + chr2.2:73453691-73453710 None:intergenic 50.0%
CTTGCAGGTGGATAGTGAGT+AGG - chr2.2:73453323-73453342 MS.gene047204:intron 50.0%
GCAGCAGAAAGGTTGTGAGA+GGG + chr2.2:73454403-73454422 None:intergenic 50.0%
GCTATATTGGTCACTCCGCT+TGG - chr2.2:73452283-73452302 MS.gene047204:intron 50.0%
GGTTGCGCTTTGTGTGTTGT+GGG - chr2.2:73452453-73452472 MS.gene047204:intron 50.0%
GGTTTGTATACGGAGTGGGT+AGG - chr2.2:73451399-73451418 MS.gene047204:intron 50.0%
GTATGAACCACTTTGGTGGG+TGG - chr2.2:73451603-73451622 MS.gene047204:intron 50.0%
GTTGCGCTTTGTGTGTTGTG+GGG - chr2.2:73452454-73452473 MS.gene047204:intron 50.0%
TAAGATGGCAGGACAGCACT+AGG + chr2.2:73455278-73455297 None:intergenic 50.0%
TACCGATAGGGAGCCTACAA+GGG + chr2.2:73452763-73452782 None:intergenic 50.0%
TCAAGTAGAGAGGTCGCGAT+AGG + chr2.2:73454435-73454454 None:intergenic 50.0%
TCCTCGAATTATGTGTGCGG+CGG + chr2.2:73451310-73451329 None:intergenic 50.0%
TCGACTCTACTCCGAATTGG+TGG - chr2.2:73454228-73454247 MS.gene047204:intron 50.0%
TGGCGAGTTCCTCTTCTAGT+TGG - chr2.2:73450303-73450322 MS.gene047204:CDS 50.0%
TGGTTGCGCTTTGTGTGTTG+TGG - chr2.2:73452452-73452471 MS.gene047204:intron 50.0%
TTCCCTTGTAGGCTCCCTAT+CGG - chr2.2:73452758-73452777 MS.gene047204:CDS 50.0%
TTGTATACGGAGTGGGTAGG+GGG - chr2.2:73451402-73451421 MS.gene047204:intron 50.0%
! CTATTTCCGCTTGGTGGAGT+TGG - chr2.2:73454068-73454087 MS.gene047204:intron 50.0%
! TCCTCTTCTAGTTGGCGAGA+GGG - chr2.2:73450311-73450330 MS.gene047204:CDS 50.0%
! TGGGATCTTGCTATGGATCC+AGG - chr2.2:73452537-73452556 MS.gene047204:intron 50.0%
! TTCCTCTTCTAGTTGGCGAG+AGG - chr2.2:73450310-73450329 MS.gene047204:CDS 50.0%
! TTGAAAAAAGCCGGTGCCAG+TGG - chr2.2:73450422-73450441 MS.gene047204:intron 50.0%
!! GCTAGCACCGATGAAGAAAC+TGG + chr2.2:73450381-73450400 None:intergenic 50.0%
!! GGCTCGGCTTGGTTTGTATA+CGG - chr2.2:73451389-73451408 MS.gene047204:intron 50.0%
!! GGCTTGGTTTGTATACGGAG+TGG - chr2.2:73451394-73451413 MS.gene047204:intron 50.0%
!! TCAACTCTATTGGCTCGGCT+TGG - chr2.2:73451378-73451397 MS.gene047204:intron 50.0%
!!! GGTAGGGTTTTGATTTGGGC+TGG + chr2.2:73454284-73454303 None:intergenic 50.0%
ACCGCCGCACACATAATTCG+AGG - chr2.2:73451306-73451325 MS.gene047204:intron 55.0%
ATCATGCCCACCCACCAAAG+TGG + chr2.2:73451613-73451632 None:intergenic 55.0%
GAGGAGAGTAGATCCGATGG+AGG - chr2.2:73450821-73450840 MS.gene047204:intron 55.0%
GGAGAACTGGGGGGAAAACA+AGG + chr2.2:73452816-73452835 None:intergenic 55.0%
TCCCTCTCGCCAACTAGAAG+AGG + chr2.2:73450315-73450334 None:intergenic 55.0%
TGCTCTGATTCCACTGGCAC+CGG + chr2.2:73450435-73450454 None:intergenic 55.0%
! ACATGTGTCGGTGTCCGACA+TGG + chr2.2:73451281-73451300 None:intergenic 55.0%
! CGGCGGTGTCAAACATGTGT+CGG + chr2.2:73451293-73451312 None:intergenic 55.0%
!! TGTCGGTGTCGTGTCCATGT+CGG - chr2.2:73451264-73451283 MS.gene047204:intron 55.0%
GGGACAGAGCAGCAGCAGAA+AGG + chr2.2:73454414-73454433 None:intergenic 60.0%
GGTGCCAGTGGAATCAGAGC+AGG - chr2.2:73450434-73450453 MS.gene047204:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 73450302 73455437 73450302 ID=MS.gene047204
chr2.2 mRNA 73450302 73455437 73450302 ID=MS.gene047204.t1;Parent=MS.gene047204
chr2.2 exon 73455284 73455437 73455284 ID=MS.gene047204.t1.exon1;Parent=MS.gene047204.t1
chr2.2 CDS 73455284 73455437 73455284 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73454102 73454158 73454102 ID=MS.gene047204.t1.exon2;Parent=MS.gene047204.t1
chr2.2 CDS 73454102 73454158 73454102 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73453413 73453503 73453413 ID=MS.gene047204.t1.exon3;Parent=MS.gene047204.t1
chr2.2 CDS 73453413 73453503 73453413 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73453181 73453341 73453181 ID=MS.gene047204.t1.exon4;Parent=MS.gene047204.t1
chr2.2 CDS 73453181 73453341 73453181 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73452960 73453087 73452960 ID=MS.gene047204.t1.exon5;Parent=MS.gene047204.t1
chr2.2 CDS 73452960 73453087 73452960 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73452713 73452850 73452713 ID=MS.gene047204.t1.exon6;Parent=MS.gene047204.t1
chr2.2 CDS 73452713 73452850 73452713 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73452023 73452115 73452023 ID=MS.gene047204.t1.exon7;Parent=MS.gene047204.t1
chr2.2 CDS 73452023 73452115 73452023 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73450540 73450645 73450540 ID=MS.gene047204.t1.exon8;Parent=MS.gene047204.t1
chr2.2 CDS 73450540 73450645 73450540 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
chr2.2 exon 73450302 73450399 73450302 ID=MS.gene047204.t1.exon9;Parent=MS.gene047204.t1
chr2.2 CDS 73450302 73450399 73450302 ID=cds.MS.gene047204.t1;Parent=MS.gene047204.t1
Gene Sequence

>MS.gene047204

ATGGCGAGTTCCTCTTCTAGTTGGCGAGAGGGAATGTCCTCTGATAATATCAAAGGTTTAGTCCTCGCCCTTTCATCCAGTTTCTTCATCGGTGCTAGCTTCATTGTTAAAAAAAAGGGTTTGAAAAAAGCCGGTGCCAGTGGAATCAGAGCAGGTTCTATTCTATTCTTCGATCCACTTGCTGCTTCATTTCATTATGTTTACTTCTCATTCTCGACTTCAACTTTCATAAAATTGGATTGGATTGGATTATTAGGTTTTTGCTTAAGATCTGCATTTTTTTGGGGTTTTTACCTTTTCTTTAATGGGTAACTTTAACTGTTTTTCAAACTGGATTTTGCAATGCCAAGCCTTTTCATCTTTTAACTGTTTGCATAACATTTTACAACCTAAACGAGTAAGCTTAATTTATCCATTTTCAGTGCAACAAACTAATTGGGATAAAGATATCTCTTTGATGCTCTTATCTATTATTTTGTTGTGCTATTTGATATGGAGAAGATTCGTGGATTTTCTACTGAGGAGAGTAGATCCGATGGAGGGTAGTGTCAAATCACTAGAGGCAGAGGAAGACCTAGAAAGATTATAGGATAAACTATCAACAATGATCTATAGATTAATGAGTTGGACAGGGATATGGTACATGATAGAACATTATGGCGTACTTTGATCTGACTCCACTTAGAGGGATAAGACTTGGATGTTGTTGTTTAATCGTCATGAAGAAAATGGAGTATGCTGTGGCCTGATCATGATAATGTTAAACTATGTTGAAAAAACTGTCTACAAGTTAAATTGTTTTCATGTTGTTTGTATGGACATATTTTTCTTTCTCATACAGTTAAATATGTTAACATAAAATGGATGCGTACAGATTAATACTATGAAGCACAGATACAGACGCGGACACTCCGACACCAATAATAATTTGAGAAAATGACATAATTCAGTGTAATCATAGGTGTCGGTGTCGTGTCCATGTCGGACACCGACACATGTTTGACACCGCCGCACACATAATTCGAGGAGTATCAGTGCTTCATAGGTTAAATATGTTAAAATGAAATGGATGCTTATCAACTCTATTGGCTCGGCTTGGTTTGTATACGGAGTGGGTAGGGGGCAAGTTTCGTTTTTCAAGGAACTATTTTATTTTATGATTTTATCTGCGCAATAGTTGTTTTTTTTCCCCTCCTCATATTTGTGTTTCTTGTTATATACCCAATCAGGTCATGCACAATTCAATTGTAACTGACTTTCAAAGAATTATATGTTACAGGAAGTGGAGGCTATTCGTACTTGTATGAACCACTTTGGTGGGTGGGCATGATAACAAGTGAGTCATTCATGGTTCTATTTATTGTGAATTGATTATTGAATTGCATGCTCGTCTATATTTTCATTAAAATGTGTTTGTGCAACATCTTATTGTTTGGTGTTGGTGAACTGTATCTTTGATTTTTCTGTGCATCCCCACAAATCCTGCTTCGTTTTCAGCTTCTAGTGATTTTAGTAGTACAGAAAGTGATGTAGTTCCTATCTAAACTTGTATAATGTTAGTTCCATGCAGAACCTTAACAAATCTTAATAGGGGTGTTCTTCTGTATGTTTTTCTCTCATCGCTGTATGATTTATCATCTCCTAGCAAAAAGTCACAAGTGTTCGTTAAGTTATATAAATTTTTGTTACTTATTGTCCAGATTTATTGTAGAAGGATTTTTTTTTTTGGCTAAAGCTTGCATCTTTTCAGCTTTTCTTTCTAATCTTCTTACTTCTGTTTTGCTTTCACACATTTTCCATGGGAATATTTCTACATTCCAATCTATGGACGCCAACAAATTATCCATGTACAACTTATTGATCTGAGTTGCATACATTTATTGATACCAACAAATGGATTAAAGTTTCAATTTTAACATTTGCTTTTTCAACAGTGATTGTCGGAGAGATTGCCAATTTTGCAGCATATGCATTTGCTCCAGCTATATTGGTCACTCCGCTTGGTGCTCTTAGCATTATTATCAGGTATGGCAATTTTAACCTTCATATTTATGCTTGACTCTTTGTAAATTCTGATTTGTGATGATGTGCTGCAGTGCTGCTCTTGCCCATATTATCTTACGGGAGAGACTACATATATTTGGAGTTCTTGGTTGCGCTTTGTGTGTTGTGGGGTCTACAACAATTGTTCTACATGCTCCTCAAGAACGGGAAATTGAATCAGTGCCAGAAGTATGGGATCTTGCTATGGATCCAGGTAGCCATGTTTCAATCTTGAAATGTTAGTCTACTCAAAATATTGCATTGTAATCTAACTACTAACCAAAAGACACAATCTTTTTTTCTGCAGCTTTTCTATTTTATGCCGCATTGGTTATAACAGCTACCTTTATTCTAGTCTTCCACTTCATTCCTCTATATGGCCAGACACACATAATGGTTTATATCGGCGTTTGTTCCCTTGTAGGCTCCCTATCGGTATGTCTCATCATCTAGTTATTGATGAATAGTCCTTGTTTTCCCCCCAGTTCTCCGTTTATTTTTTTCCTTCTTTCTGTATTTATATTGTCAGGTTCTCTTTTAATAGGTTATGAGTGTTAAAGCTCTTGGAATTGCCATAAAGTTAACTCTGTCTGGGATGAATCAGCTAATTTACCCTCAAACTTGGGTTTTTGCTCTAGTTGTAATTGTTTGTGTTCTTACCCAAATGAATTATTTAAATAAGGTATGATAGCTTTTCTTGTTTCTTGATGTTTACATTTATTGGTAATTTTTGAAGTACCTTAATGGAAAACAATACATAAAAATGATTTTTCGGTGAAAAAATAAATCAAGAAAAAATTAATCTGTAGAGAAGTAACGAATACATTATCTATTTTGCATGATGGTGAAGTTATTTTGCAGTCTGCTGTGGCAGTTATGCTATAAAGGATAATGTTTTTCTTTAAAAACTCCATGTTTTACATCATTATTTATGGAAGAGGATTAGTACATTGAAGTTGATGCCTTATATTCGAATGGCTTGCAGGTGGATAGTGAGTAGGAAGGTCTGATGATGCAAGTGTAATGAATGGTTTAATAATTTAAATGCATATAAATGCAAGTTTAGGTATCTGAGTGGTCTATGTGAAAAGCTCATTATCTCTATAGTTTCGAACTTATGTTTAGGATTACAATGTGACTTCAATATACAGTTCCTAATCCTAAATGTTTTGTGCACGGTCCTTCTACGAATTAAACTGTGTAGTAACTTTTACACATTGGTACATCTATTTTGGGTGGCTGGCTAATTCATGTGATACTTTTTTTTCTTCTTAATCAGGCACTGGATACTTTCAATACGGCAGTGGTATCTCCCATTTATTATGTTATGTTCACAACATTAACCATCGTGGCCAGTGTTATCATGTTTAAGGTAAATTTTGTTATGAGACTGGTTTATTTTTATTTTAATGACTCCGTAGCTTTTTTTACATTATCCAGATTGGTTGCTTAATTTAAAATCTGTGTTTTCTGAAGCCTATTGTCGAACTGGTTTATTTAAAGCATAAAATATCTTTCTATGTATTATGTATTATTCCATGTTTATGTTCTTCTTGCTTTTAATATAATGGCAAAATAGAAAGCTAGATATGACACATTATGGCAGAGAAGTTCAATTTTAAGATGATATTTAACGTCATTTTGTGCTATTCTTGTCACAAGATTCTTAACGATACTTATATACAGGTTGTTGGCTAGAACTACAATAGCAAACAACCAAATCCTATTTCCGCTTGGTGGAGTTGGCTAAATAAACGAAACAAATATTTCGTCGTGAATCGAGTCCAGTGTGATAGATCATGCAAATCTCAATTTCTCTGAATGGTTTGACTTATAGGCTTTCCTAATCTTCCCTCTACATGTAACTATTGTGCTATCCTCTATCGACTCTACTCCGAATTGGTGGTTTTATGGGTCTTCTTTGCTCATTTTCAAGCCAGCCCAAATCAAAACCCTACCATTTTTACTACGATTGGAGTTGCCTCAACTTTCTTTGTAATGATTTTCTCGTTCCATTTCTAGTCTTCCGCTCTATCTCTACTGTTATTCTGCTTTCCCTCTCACAACCTTTCTGCTGCTGCTCTGTCCCTATCGCGACCTCTCTACTTGAAGTGCTGCTGTTGAGCCCACATGATTTAGTGAAATTCATTTGAATTTCAACCAATAGAATAGTGTGTTTTGGGAATAGTTTTTTTTTTTCTTCTTTTTTTTGACGGGGGAAGAGTGTGTTAAAGTGTGCATCACTAACACTTCTCATATTTATTTTTTGTATGAATGGAGTACTTATTTTTGGTATGATACCTAGAAGTATGTCAACCTGATTTTACTTATGTTATAGTCAAGAATCAAGCTTATCAAAGTAAGCGTGTCCCACATATATGTCATAAACTGGTTCCAAAAGAAGAGAGAGATCTTTGAGAATAAATTACCTTCTGCTGAGGCATTTACATCTAGAATGTATGAAAATTGAAAATCATGTACGTACACATACCTTCAACAGGGTGTAAAACTGCTTTCTTTTTGCTCATTTCTTAAACAAGCATGGAGACTCGCAAATCCTTTGGTACACATTAAGAATTGGTTTTATCCTTCATTTTGATTTTTTTTAAGAGGTCCTTCATTTTGATTTTTATCGTGTTCCAGGTGCAGATTCATTGGTTTAGATATTATATACATGTCAAATATCTGTCTGTCCATTGTTTGCTAATTTGAAGATTCATCTTTGACTGAATATTAAACTTGATATCAGGACTGGGATAGGCAAAGTCCAACACAAGTTATCACAGAAATATGTGGGTTTGTGACGATACTTTCAGGAACTTTTCTTCTGCACAAGACTAAGGATATGGCAGAAGGTATGCTCTAGTGATCTCATATGTTGTAATTTCACTTTACTTCAGATTTCCTTCTATTGGGCTCACAATGCACTTCCTAGTGCTGTCCTGCCATCTTAAAACATGATTATTAATGTTATCTTCTTTTACATGCTTACTAGGTTCATCTATTAGACTTAATAAGCATTCAGAAGAGGATGGCTTTGATGATGTTGAAGGGATTCCCCTTAGAAGGCAAGAATCCATGAGATCGCCATGA
Protein sequence

>MS.gene047204.t1

MASSSSSWREGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGIRAGSGGYSYLYEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGVLGCALCVVGSTTIVLHAPQEREIESVPEVWDLAMDPAFLFYAALVITATFILVFHFIPLYGQTHIMVYIGVCSLVGSLSVMSVKALGIAIKLTLSGMNQLIYPQTWVFALVVIVCVLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTIVASVIMFKDWDRQSPTQVITEICGFVTILSGTFLLHKTKDMAEGSSIRLNKHSEEDGFDDVEGIPLRRQESMRSP