Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90964.t1 | XP_013456503.1 | 98.8 | 334 | 4 | 0 | 1 | 334 | 1 | 334 | 7.00E-180 | 639.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90964.t1 | Q8GWX2 | 76.4 | 322 | 72 | 2 | 4 | 324 | 3 | 321 | 1.2e-135 | 484.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90964.t1 | A0A072UL97 | 98.8 | 334 | 4 | 0 | 1 | 334 | 1 | 334 | 5.1e-180 | 639.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52088 | MS.gene90964 | PPI |
| MS.gene057722 | MS.gene90964 | PPI |
| MS.gene90964 | MS.gene002040 | PPI |
| MS.gene90964 | MS.gene00614 | PPI |
| MS.gene90964 | MS.gene072062 | PPI |
| MS.gene77513 | MS.gene90964 | PPI |
| MS.gene90964 | MS.gene047204 | PPI |
| MS.gene90964 | MS.gene045378 | PPI |
| MS.gene90964 | MS.gene75691 | PPI |
| MS.gene90964 | MS.gene79876 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90964.t1 | MTR_4g074050 | 98.802 | 334 | 4 | 0 | 1 | 334 | 1 | 334 | 0.0 | 676 |
| MS.gene90964.t1 | MTR_3g097220 | 62.388 | 335 | 116 | 2 | 1 | 331 | 1 | 329 | 1.68e-148 | 421 |
| MS.gene90964.t1 | MTR_3g097220 | 62.805 | 328 | 115 | 1 | 1 | 321 | 1 | 328 | 6.01e-148 | 420 |
| MS.gene90964.t1 | MTR_8g095060 | 60.058 | 343 | 124 | 3 | 4 | 333 | 3 | 345 | 1.39e-147 | 419 |
| MS.gene90964.t1 | MTR_5g090020 | 66.887 | 302 | 98 | 2 | 1 | 300 | 1 | 302 | 1.30e-141 | 404 |
| MS.gene90964.t1 | MTR_2g006070 | 61.745 | 298 | 114 | 0 | 4 | 301 | 15 | 312 | 1.19e-135 | 389 |
| MS.gene90964.t1 | MTR_8g081650 | 59.259 | 297 | 120 | 1 | 1 | 296 | 1 | 297 | 2.29e-129 | 372 |
| MS.gene90964.t1 | MTR_3g083960 | 57.792 | 308 | 129 | 1 | 1 | 307 | 1 | 308 | 2.31e-124 | 360 |
| MS.gene90964.t1 | MTR_5g090020 | 64.315 | 241 | 86 | 0 | 60 | 300 | 17 | 257 | 9.93e-108 | 317 |
| MS.gene90964.t1 | MTR_2g006070 | 63.043 | 230 | 85 | 0 | 4 | 233 | 15 | 244 | 3.28e-101 | 298 |
| MS.gene90964.t1 | MTR_3g097220 | 57.143 | 231 | 92 | 1 | 98 | 321 | 1 | 231 | 8.90e-92 | 274 |
| MS.gene90964.t1 | MTR_2g006070 | 61.622 | 185 | 71 | 0 | 4 | 188 | 15 | 199 | 1.97e-74 | 228 |
| MS.gene90964.t1 | MTR_5g049870 | 59.677 | 62 | 21 | 1 | 239 | 300 | 166 | 223 | 2.58e-13 | 69.3 |
| MS.gene90964.t1 | MTR_6g033100 | 19.926 | 271 | 197 | 4 | 54 | 307 | 57 | 324 | 2.94e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90964.t1 | AT2G21120 | 76.398 | 322 | 72 | 2 | 4 | 324 | 3 | 321 | 0.0 | 509 |
| MS.gene90964.t1 | AT4G38730 | 73.209 | 321 | 82 | 2 | 3 | 323 | 2 | 318 | 8.02e-174 | 485 |
| MS.gene90964.t1 | AT1G71900 | 63.423 | 298 | 109 | 0 | 4 | 301 | 17 | 314 | 1.05e-144 | 412 |
| MS.gene90964.t1 | AT1G71900 | 63.851 | 296 | 107 | 0 | 4 | 299 | 17 | 312 | 2.50e-144 | 411 |
| MS.gene90964.t1 | AT1G34470 | 61.745 | 298 | 114 | 0 | 4 | 301 | 17 | 314 | 1.57e-140 | 402 |
| MS.gene90964.t1 | AT4G09640 | 59.006 | 322 | 123 | 2 | 4 | 325 | 17 | 329 | 1.40e-132 | 383 |
| MS.gene90964.t1 | AT4G13800 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.98e-127 | 367 |
| MS.gene90964.t1 | AT4G13800 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.98e-127 | 367 |
| MS.gene90964.t1 | AT4G13800 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.98e-127 | 367 |
| MS.gene90964.t1 | AT4G13800 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.98e-127 | 367 |
| MS.gene90964.t1 | AT3G23870 | 60.855 | 304 | 118 | 1 | 5 | 307 | 7 | 310 | 1.46e-119 | 348 |
| MS.gene90964.t1 | AT3G23870 | 60.855 | 304 | 118 | 1 | 5 | 307 | 7 | 310 | 1.46e-119 | 348 |
| MS.gene90964.t1 | AT3G23870 | 60.855 | 304 | 118 | 1 | 5 | 307 | 7 | 310 | 1.46e-119 | 348 |
| MS.gene90964.t1 | AT3G23870 | 60.855 | 304 | 118 | 1 | 5 | 307 | 7 | 310 | 1.46e-119 | 348 |
| MS.gene90964.t1 | AT4G13800 | 63.077 | 260 | 96 | 0 | 5 | 264 | 7 | 266 | 3.41e-110 | 322 |
| MS.gene90964.t1 | AT4G13800 | 63.077 | 260 | 96 | 0 | 5 | 264 | 7 | 266 | 3.41e-110 | 322 |
| MS.gene90964.t1 | AT4G13800 | 61.373 | 233 | 90 | 0 | 5 | 237 | 7 | 239 | 1.73e-92 | 276 |
| MS.gene90964.t1 | AT4G13800 | 61.373 | 233 | 90 | 0 | 5 | 237 | 7 | 239 | 1.73e-92 | 276 |
| MS.gene90964.t1 | AT4G13800 | 61.373 | 233 | 90 | 0 | 5 | 237 | 7 | 239 | 1.73e-92 | 276 |
| MS.gene90964.t1 | AT4G13800 | 61.373 | 233 | 90 | 0 | 5 | 237 | 7 | 239 | 1.73e-92 | 276 |
| MS.gene90964.t1 | AT3G23870 | 56.054 | 223 | 97 | 1 | 86 | 307 | 8 | 230 | 1.91e-88 | 266 |
Find 84 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTTCTTGGACAGAATT+TGG | 0.146072 | 4.2:-34640444 | None:intergenic |
| TGCCAGCGCAATAATGTTTA+AGG | 0.152481 | 4.2:+34641940 | MS.gene90964:CDS |
| CTTGGGAATCTGTTCATTAA+TGG | 0.160246 | 4.2:+34640672 | MS.gene90964:CDS |
| CAAATTCTGTCCAAGAAATA+TGG | 0.182740 | 4.2:+34640445 | MS.gene90964:CDS |
| GCAATAAAGCTTACCCTTGA+TGG | 0.257921 | 4.2:+34641006 | MS.gene90964:CDS |
| GAACACCTTATCGTTATAAA+TGG | 0.262491 | 4.2:+34642383 | MS.gene90964:CDS |
| CGCAACGGTTTCAGTAGTTT+TGG | 0.284010 | 4.2:+34640597 | MS.gene90964:CDS |
| TGGCCAATTCCCATATTTCT+TGG | 0.298454 | 4.2:-34640455 | None:intergenic |
| ATATATTGCCAGTTCTGTTT+TGG | 0.310127 | 4.2:+34640314 | MS.gene90964:intron |
| TTGGGAATCTGTTCATTAAT+GGG | 0.315254 | 4.2:+34640673 | MS.gene90964:CDS |
| TATTCAGGTTATGAGCATTA+AGG | 0.365174 | 4.2:+34640972 | MS.gene90964:intron |
| TATCTGCCAACAGTGATTAC+TGG | 0.376516 | 4.2:+34640127 | MS.gene90964:intron |
| TGTCCAAGAAATATGGGAAT+TGG | 0.400693 | 4.2:+34640452 | MS.gene90964:CDS |
| TTCATTAATGGGTTCACTTA+CGG | 0.404625 | 4.2:+34640684 | MS.gene90964:CDS |
| GGATTCATCACCGTCCTTAC+GGG | 0.409126 | 4.2:+34642124 | MS.gene90964:CDS |
| TTTGGCCCACTTCTTGTTGA+AGG | 0.412006 | 4.2:+34640332 | MS.gene90964:CDS |
| TGGATTCATCACCGTCCTTA+CGG | 0.413632 | 4.2:+34642123 | MS.gene90964:CDS |
| TTGAAATTTGCAGGGGTTGG+TGG | 0.419893 | 4.2:+34639981 | MS.gene90964:intron |
| ATTCTGCACTCACCTTGTTA+AGG | 0.421446 | 4.2:-34641107 | None:intergenic |
| GTTTGTTCAAGTGGATTCAT+TGG | 0.433985 | 4.2:+34638761 | MS.gene90964:CDS |
| TTCATCCTCAACGCACTTTG+TGG | 0.436278 | 4.2:-34642363 | None:intergenic |
| ATTGGCGGGAATGGGAGTTT+CGG | 0.444614 | 4.2:+34638712 | None:intergenic |
| CTTATCTACTAGAGCCACTT+TGG | 0.445524 | 4.2:+34640009 | MS.gene90964:CDS |
| CCCACTTCTTGTTGAAGGAA+AGG | 0.449464 | 4.2:+34640337 | MS.gene90964:CDS |
| CTAGAGCCACTTTGGTGGGT+TGG | 0.450700 | 4.2:+34640017 | MS.gene90964:CDS |
| GAAGGAAAGGCTTCAGAAGA+TGG | 0.459990 | 4.2:+34640350 | MS.gene90964:CDS |
| ATTACAGGATTGGTCTGGTC+AGG | 0.460119 | 4.2:+34642072 | MS.gene90964:intron |
| AGGTTCAAAATTTAAAATCA+AGG | 0.462094 | 4.2:-34640620 | None:intergenic |
| AAATTCTGTCCAAGAAATAT+GGG | 0.463697 | 4.2:+34640446 | MS.gene90964:CDS |
| GGATGTTTGTCCTGCATCAT+GGG | 0.474400 | 4.2:+34640381 | MS.gene90964:CDS |
| CTATTTGACTTATTCCATCA+AGG | 0.474956 | 4.2:-34641020 | None:intergenic |
| TGGTTGCATCGAATGTATCC+AGG | 0.479552 | 4.2:-34641871 | None:intergenic |
| GAGTGTGTTCTTGTGGTGCA+TGG | 0.480134 | 4.2:-34640422 | None:intergenic |
| TGGGGAAGCTGCAAATTTCG+TGG | 0.490031 | 4.2:+34640147 | MS.gene90964:CDS |
| CTGAACCATTTATAACGATA+AGG | 0.490270 | 4.2:-34642388 | None:intergenic |
| AGGATGTTTGTCCTGCATCA+TGG | 0.490515 | 4.2:+34640380 | MS.gene90964:CDS |
| GCCACTTTGGTGGGTTGGCA+TGG | 0.496440 | 4.2:+34640022 | MS.gene90964:CDS |
| GTGAACATCACATAATATAC+AGG | 0.497099 | 4.2:-34641902 | None:intergenic |
| TAGTTTCATCTTGAAGAAGA+AGG | 0.499105 | 4.2:+34638787 | MS.gene90964:CDS |
| TACCTTAAACATTATTGCGC+TGG | 0.499770 | 4.2:-34641942 | None:intergenic |
| ATACTTGCGGTTTGTTCAAG+TGG | 0.499989 | 4.2:+34638752 | MS.gene90964:CDS |
| ATCTGCCAACAGTGATTACT+GGG | 0.505809 | 4.2:+34640128 | MS.gene90964:intron |
| GTTATGAGCATTAAGGCCAT+TGG | 0.506421 | 4.2:+34640979 | MS.gene90964:CDS |
| GCAGTTCTAGTCACTCCTCT+TGG | 0.506507 | 4.2:+34640187 | MS.gene90964:CDS |
| AAGGAAAGGCTTCAGAAGAT+GGG | 0.508144 | 4.2:+34640351 | MS.gene90964:CDS |
| GCCTTTCCTTCAACAAGAAG+TGG | 0.508462 | 4.2:-34640338 | None:intergenic |
| TCTACTAGAGCCACTTTGGT+GGG | 0.510157 | 4.2:+34640013 | MS.gene90964:CDS |
| CTGGTGCAGGGAGCATGTCA+TGG | 0.510195 | 4.2:+34642324 | MS.gene90964:intron |
| AACAATTGATCCCATGATGC+AGG | 0.510554 | 4.2:-34640391 | None:intergenic |
| TTTGCATTACAGGATTGGTC+TGG | 0.512734 | 4.2:+34642067 | MS.gene90964:intron |
| GCTTCACGCGGTACTCGTGC+TGG | 0.514502 | 4.2:+34638824 | MS.gene90964:CDS |
| GCGCACTCAGCATCATTGTC+AGG | 0.519115 | 4.2:+34640209 | MS.gene90964:CDS |
| GAATTTGGAGTGTGTTCTTG+TGG | 0.522100 | 4.2:-34640429 | None:intergenic |
| CGTGGCTTATATTTATGCTC+CGG | 0.534616 | 4.2:+34640165 | MS.gene90964:CDS |
| AAGCTTTATTGCAATTCCAA+TGG | 0.536342 | 4.2:-34640995 | None:intergenic |
| TGGGAATTGGCCACTCAACC+AGG | 0.542211 | 4.2:+34640465 | MS.gene90964:CDS |
| TATTTGACTTATTCCATCAA+GGG | 0.543563 | 4.2:-34641019 | None:intergenic |
| ATCTACTAGAGCCACTTTGG+TGG | 0.549132 | 4.2:+34640012 | MS.gene90964:CDS |
| AAATAGCTTATCCTCAGACT+TGG | 0.552061 | 4.2:+34641037 | MS.gene90964:CDS |
| CTGTGTAACGACGCATATTG+TGG | 0.552275 | 4.2:-34641076 | None:intergenic |
| CAAGAAGAATCTACTAGGAA+AGG | 0.554656 | 4.2:+34642175 | MS.gene90964:CDS |
| AGTTTCATCTTGAAGAAGAA+GGG | 0.554873 | 4.2:+34638788 | MS.gene90964:CDS |
| GCAAAATTATTGTTCCCGTA+AGG | 0.557492 | 4.2:-34642138 | None:intergenic |
| AAGAACAAGAAGAATCTACT+AGG | 0.560901 | 4.2:+34642170 | MS.gene90964:CDS |
| TACAAGCCAACCTGGTTGAG+TGG | 0.576933 | 4.2:-34640475 | None:intergenic |
| AATTATTGTTCCCGTAAGGA+CGG | 0.583221 | 4.2:-34642134 | None:intergenic |
| AGAGGAGTGACTAGAACTGC+CGG | 0.586116 | 4.2:-34640184 | None:intergenic |
| TTACAAAGGGTTGATACTTG+CGG | 0.590092 | 4.2:+34638739 | MS.gene90964:CDS |
| GGAGTTTCGGAGAATTACAA+AGG | 0.591179 | 4.2:+34638725 | MS.gene90964:CDS |
| TATGATTTATGCTGCCGCAA+CGG | 0.604508 | 4.2:+34640582 | MS.gene90964:CDS |
| GAGTTTCGGAGAATTACAAA+GGG | 0.611491 | 4.2:+34638726 | MS.gene90964:CDS |
| CCTTTCCTTCAACAAGAAGT+GGG | 0.611534 | 4.2:-34640337 | None:intergenic |
| AGGAAAGGCTTCAGAAGATG+GGG | 0.615805 | 4.2:+34640352 | MS.gene90964:CDS |
| AGCATAGCTTCTGAGATATG+TGG | 0.619389 | 4.2:+34642103 | MS.gene90964:CDS |
| ACCATGCCAACCCACCAAAG+TGG | 0.619871 | 4.2:-34640023 | None:intergenic |
| CTTAAACGTGCTGCTTCACG+CGG | 0.625267 | 4.2:+34638812 | MS.gene90964:CDS |
| ACAGTTGAATTACCTTAACA+AGG | 0.637833 | 4.2:+34641095 | MS.gene90964:CDS |
| GGTTGCATCGAATGTATCCA+GGG | 0.642191 | 4.2:-34641870 | None:intergenic |
| ATAATATACAGGAGTAACAA+TGG | 0.648515 | 4.2:-34641891 | None:intergenic |
| ATGATGCTGAGTGCGCCAAG+AGG | 0.665488 | 4.2:-34640202 | None:intergenic |
| AGATTCCACAAAGTGCGTTG+AGG | 0.668208 | 4.2:+34642358 | MS.gene90964:CDS |
| CAAAACTACTGAAACCGTTG+CGG | 0.677080 | 4.2:-34640596 | None:intergenic |
| GGAAAGGCTTCAGAAGATGG+GGG | 0.709721 | 4.2:+34640353 | MS.gene90964:CDS |
| TCTGCCAACAGTGATTACTG+GGG | 0.791567 | 4.2:+34640129 | MS.gene90964:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAAATTAGAAATTTC+TGG | + | chr4.2:34640246-34640265 | MS.gene90964:intron | 10.0% |
| !! | TAAATTAAATTGAATTGAAT+AGG | - | chr4.2:34638866-34638885 | None:intergenic | 10.0% |
| !! | AATTTAAGAGTAAACTAAAA+TGG | - | chr4.2:34640505-34640524 | None:intergenic | 15.0% |
| !! | ATTTAAGAGTAAACTAAAAT+GGG | - | chr4.2:34640504-34640523 | None:intergenic | 15.0% |
| !! | CAAAATTTCTTAAAAGAATA+AGG | - | chr4.2:34641814-34641833 | None:intergenic | 15.0% |
| !! | CTATTGTTTATTTAATATAC+TGG | + | chr4.2:34641170-34641189 | MS.gene90964:intron | 15.0% |
| !! | TAAACAATAGTTTATAGTTT+CGG | - | chr4.2:34641160-34641179 | None:intergenic | 15.0% |
| !!! | AATGATTTTTTAAACTATTC+AGG | + | chr4.2:34640957-34640976 | MS.gene90964:intron | 15.0% |
| !! | AATCATAAATTCTGTTGAAA+AGG | - | chr4.2:34640569-34640588 | None:intergenic | 20.0% |
| !! | ACCTGAATAAAAATCATTAT+TGG | - | chr4.2:34641496-34641515 | None:intergenic | 20.0% |
| !! | AGTTTATCAAAAATATGTTG+TGG | - | chr4.2:34639031-34639050 | None:intergenic | 20.0% |
| !! | ATAAGATTTCTCTATAACAA+TGG | + | chr4.2:34642275-34642294 | MS.gene90964:intron | 20.0% |
| !! | ATCATAAATTCTGTTGAAAA+GGG | - | chr4.2:34640568-34640587 | None:intergenic | 20.0% |
| !! | ATTGTTATAGAGAAATCTTA+TGG | - | chr4.2:34642276-34642295 | None:intergenic | 20.0% |
| !! | CAAAATCAAATTTAAGTCTT+CGG | + | chr4.2:34639887-34639906 | MS.gene90964:intron | 20.0% |
| !! | TCATGCATTAAATAAAATCA+AGG | - | chr4.2:34641216-34641235 | None:intergenic | 20.0% |
| !! | TTCTATGTATTAATTGCAAT+AGG | - | chr4.2:34641565-34641584 | None:intergenic | 20.0% |
| !!! | AATCATTATTGGCTTTTTTT+TGG | - | chr4.2:34641485-34641504 | None:intergenic | 20.0% |
| !!! | AGAGTTGATCTATTTAAATT+AGG | + | chr4.2:34641373-34641392 | MS.gene90964:intron | 20.0% |
| !!! | AGGTTCAAAATTTAAAATCA+AGG | - | chr4.2:34640623-34640642 | None:intergenic | 20.0% |
| !!! | ATTAGCTAAAAGTTTGTTTA+AGG | + | chr4.2:34639740-34639759 | MS.gene90964:intron | 20.0% |
| !!! | GTATATTTAGATTCACTTTT+GGG | - | chr4.2:34639929-34639948 | None:intergenic | 20.0% |
| !!! | GTGTTTTTAGTTATTTTGTA+AGG | + | chr4.2:34641284-34641303 | MS.gene90964:intron | 20.0% |
| !!! | TCTATGATAAATCATTTTGA+AGG | + | chr4.2:34640715-34640734 | MS.gene90964:intron | 20.0% |
| !!! | TGTATATTTAGATTCACTTT+TGG | - | chr4.2:34639930-34639949 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTGAAATTTGCA+GGG | + | chr4.2:34639973-34639992 | MS.gene90964:intron | 20.0% |
| ! | AAATTCTGTCCAAGAAATAT+GGG | + | chr4.2:34640446-34640465 | MS.gene90964:CDS | 25.0% |
| ! | AAGGAAAACTTATGAAATCA+CGG | + | chr4.2:34641303-34641322 | MS.gene90964:intron | 25.0% |
| ! | AATAACTAAAAACACAGAAG+AGG | - | chr4.2:34641279-34641298 | None:intergenic | 25.0% |
| ! | ACTAAATTGTATGATCGAAT+CGG | - | chr4.2:34638947-34638966 | None:intergenic | 25.0% |
| ! | ATAATAATGCTGTCAAATAG+AGG | - | chr4.2:34640901-34640920 | None:intergenic | 25.0% |
| ! | ATAATATACAGGAGTAACAA+TGG | - | chr4.2:34641894-34641913 | None:intergenic | 25.0% |
| ! | ATTTGCAAGTTTGTAACATT+TGG | - | chr4.2:34639842-34639861 | None:intergenic | 25.0% |
| ! | CTTATTTAAGCTTAACTTAG+TGG | - | chr4.2:34639109-34639128 | None:intergenic | 25.0% |
| ! | TAGATGGACAATAAGAAAAT+TGG | - | chr4.2:34641768-34641787 | None:intergenic | 25.0% |
| ! | TGATCATTGTTAAATGCATT+AGG | - | chr4.2:34638984-34639003 | None:intergenic | 25.0% |
| ! | TTAAGAACGCAAACAAATTA+AGG | - | chr4.2:34639361-34639380 | None:intergenic | 25.0% |
| ! | TTAGTTATAACTACCTTCAT+TGG | + | chr4.2:34639636-34639655 | MS.gene90964:intron | 25.0% |
| ! | TTGAATGTAAAATTCACGTT+TGG | + | chr4.2:34639814-34639833 | MS.gene90964:intron | 25.0% |
| ! | TTGAATTGAATAGGTGAAAA+AGG | - | chr4.2:34638857-34638876 | None:intergenic | 25.0% |
| !! | AATGATTTTTATTCAGGTGT+GGG | + | chr4.2:34641498-34641517 | MS.gene90964:intron | 25.0% |
| !! | GCCAATAATGATTTTTATTC+AGG | + | chr4.2:34641492-34641511 | MS.gene90964:intron | 25.0% |
| !! | TAATGATTTTTATTCAGGTG+TGG | + | chr4.2:34641497-34641516 | MS.gene90964:intron | 25.0% |
| !! | TATTTGACTTATTCCATCAA+GGG | - | chr4.2:34641022-34641041 | None:intergenic | 25.0% |
| !! | TTAAATTTTGAACCTCGTTA+TGG | + | chr4.2:34640628-34640647 | MS.gene90964:CDS | 25.0% |
| !!! | AAATTTGATTTTGGCATGTT+TGG | - | chr4.2:34639880-34639899 | None:intergenic | 25.0% |
| !!! | AATTTGATTTTGGCATGTTT+GGG | - | chr4.2:34639879-34639898 | None:intergenic | 25.0% |
| !!! | CGAAGACTTAAATTTGATTT+TGG | - | chr4.2:34639889-34639908 | None:intergenic | 25.0% |
| !!! | CGATCATACAATTTAGTTTT+GGG | + | chr4.2:34638950-34638969 | MS.gene90964:intron | 25.0% |
| !!! | CTTTATGTTTTGAAATTTGC+AGG | + | chr4.2:34639972-34639991 | MS.gene90964:intron | 25.0% |
| !!! | TCACTATTCAACTATTTTTC+AGG | + | chr4.2:34641847-34641866 | MS.gene90964:intron | 25.0% |
| !!! | TCGATCATACAATTTAGTTT+TGG | + | chr4.2:34638949-34638968 | MS.gene90964:intron | 25.0% |
| !!! | TTATGTTTTGAAATTTGCAG+GGG | + | chr4.2:34639974-34639993 | MS.gene90964:intron | 25.0% |
| !!! | TTTAGTTTTAGTCTGAATGT+GGG | + | chr4.2:34639574-34639593 | MS.gene90964:intron | 25.0% |
| !!! | TTTTAGTTTTAGTCTGAATG+TGG | + | chr4.2:34639573-34639592 | MS.gene90964:intron | 25.0% |
| !!! | TTTTTGAAATGAAACTCACA+TGG | + | chr4.2:34640095-34640114 | MS.gene90964:intron | 25.0% |
| !!! | TTTTTGGTTATTATGCAGAT+AGG | - | chr4.2:34641469-34641488 | None:intergenic | 25.0% |
| AACTACCTTCATTGGAAATA+AGG | + | chr4.2:34639644-34639663 | MS.gene90964:intron | 30.0% | |
| AAGAACAAGAAGAATCTACT+AGG | + | chr4.2:34642170-34642189 | MS.gene90964:CDS | 30.0% | |
| ACACTGGTATATGAAAAGAT+TGG | + | chr4.2:34642027-34642046 | MS.gene90964:intron | 30.0% | |
| ACAGTTGAATTACCTTAACA+AGG | + | chr4.2:34641095-34641114 | MS.gene90964:CDS | 30.0% | |
| ACTACCTTCATTGGAAATAA+GGG | + | chr4.2:34639645-34639664 | MS.gene90964:intron | 30.0% | |
| ACTTACTGATACAACATAGA+TGG | - | chr4.2:34641784-34641803 | None:intergenic | 30.0% | |
| AGTTTCATCTTGAAGAAGAA+GGG | + | chr4.2:34638788-34638807 | MS.gene90964:CDS | 30.0% | |
| ATAACAAAAAACCAAGTCTG+AGG | - | chr4.2:34641051-34641070 | None:intergenic | 30.0% | |
| CAAATTACGATAACATGAGA+CGG | + | chr4.2:34641539-34641558 | MS.gene90964:intron | 30.0% | |
| CAAATTCTGTCCAAGAAATA+TGG | + | chr4.2:34640445-34640464 | MS.gene90964:CDS | 30.0% | |
| CAACTGTGTTTCTTCAAAAT+TGG | - | chr4.2:34641702-34641721 | None:intergenic | 30.0% | |
| CAGAAATCAACTAACATATC+CGG | + | chr4.2:34640290-34640309 | MS.gene90964:intron | 30.0% | |
| CATATTTCTTGGACAGAATT+TGG | - | chr4.2:34640447-34640466 | None:intergenic | 30.0% | |
| CTGAACCATTTATAACGATA+AGG | - | chr4.2:34642391-34642410 | None:intergenic | 30.0% | |
| GAACACCTTATCGTTATAAA+TGG | + | chr4.2:34642383-34642402 | MS.gene90964:CDS | 30.0% | |
| GTGAACATCACATAATATAC+AGG | - | chr4.2:34641905-34641924 | None:intergenic | 30.0% | |
| TAGTTTCATCTTGAAGAAGA+AGG | + | chr4.2:34638787-34638806 | MS.gene90964:CDS | 30.0% | |
| TATAGCACTGTAGCATATAA+CGG | - | chr4.2:34640797-34640816 | None:intergenic | 30.0% | |
| TATAGTTTCTTACACTAGTG+TGG | + | chr4.2:34641238-34641257 | MS.gene90964:intron | 30.0% | |
| TATGAAACACAGTTTATGAG+AGG | + | chr4.2:34639173-34639192 | MS.gene90964:intron | 30.0% | |
| TTATGGACAGAAAAATATGC+TGG | + | chr4.2:34640645-34640664 | MS.gene90964:CDS | 30.0% | |
| TTGCAACATTGCTTAAACAA+AGG | - | chr4.2:34641618-34641637 | None:intergenic | 30.0% | |
| TTGGGAATCTGTTCATTAAT+GGG | + | chr4.2:34640673-34640692 | MS.gene90964:CDS | 30.0% | |
| ! | AAAAATATGCTGGTCTACTT+GGG | + | chr4.2:34640655-34640674 | MS.gene90964:CDS | 30.0% |
| ! | ATAAGAAAATTGGTGTCTGT+AGG | - | chr4.2:34641758-34641777 | None:intergenic | 30.0% |
| ! | ATATATTGCCAGTTCTGTTT+TGG | + | chr4.2:34640314-34640333 | MS.gene90964:intron | 30.0% |
| ! | ATATTTTTCTGTCCATAACG+AGG | - | chr4.2:34640643-34640662 | None:intergenic | 30.0% |
| ! | CTATTTGACTTATTCCATCA+AGG | - | chr4.2:34641023-34641042 | None:intergenic | 30.0% |
| ! | GGTTGAATATTGTGATTTTG+TGG | + | chr4.2:34640267-34640286 | MS.gene90964:intron | 30.0% |
| ! | TAACAATGATCACGAGTTTT+CGG | + | chr4.2:34638992-34639011 | MS.gene90964:intron | 30.0% |
| ! | TATTCAGGTTATGAGCATTA+AGG | + | chr4.2:34640972-34640991 | MS.gene90964:intron | 30.0% |
| ! | TCATGTTTCATGCATTCTTT+TGG | + | chr4.2:34641976-34641995 | MS.gene90964:intron | 30.0% |
| ! | TGCAGAATTTTAAACTCATC+CGG | + | chr4.2:34641122-34641141 | MS.gene90964:intron | 30.0% |
| !! | AAGCTTTATTGCAATTCCAA+TGG | - | chr4.2:34640998-34641017 | None:intergenic | 30.0% |
| !! | AGAGAGCATTAATTAAAGAC+TGG | - | chr4.2:34640538-34640557 | None:intergenic | 30.0% |
| !! | ATTGATTTGCATTACAGGAT+TGG | + | chr4.2:34642062-34642081 | MS.gene90964:intron | 30.0% |
| !! | ATTTGATTTTGGCATGTTTG+GGG | - | chr4.2:34639878-34639897 | None:intergenic | 30.0% |
| !! | CTTTCATTGATTTGCATTAC+AGG | + | chr4.2:34642057-34642076 | MS.gene90964:intron | 30.0% |
| !! | GCTGTTTTCATAAGCTATTT+TGG | - | chr4.2:34639224-34639243 | None:intergenic | 30.0% |
| !! | TAATACGTTTAGCTTTGTCA+AGG | - | chr4.2:34639545-34639564 | None:intergenic | 30.0% |
| !! | TTCATTAATGGGTTCACTTA+CGG | + | chr4.2:34640684-34640703 | MS.gene90964:CDS | 30.0% |
| !!! | GACTTGGTTTTTTGTTATAG+TGG | + | chr4.2:34641053-34641072 | MS.gene90964:CDS | 30.0% |
| !!! | TGCTCTTCTTGTTTTAACAT+CGG | + | chr4.2:34641343-34641362 | MS.gene90964:intron | 30.0% |
| AAATAAGGGTCTGTTTGGAT+TGG | - | chr4.2:34639132-34639151 | None:intergenic | 35.0% | |
| AAATAGCTTATCCTCAGACT+TGG | + | chr4.2:34641037-34641056 | MS.gene90964:CDS | 35.0% | |
| AATTATTGTTCCCGTAAGGA+CGG | - | chr4.2:34642137-34642156 | None:intergenic | 35.0% | |
| ACAGAACTGGCAATATATAC+CGG | - | chr4.2:34640312-34640331 | None:intergenic | 35.0% | |
| ATGTACTAAGTAACGTATCG+CGG | + | chr4.2:34640838-34640857 | MS.gene90964:intron | 35.0% | |
| CAAGAAGAATCTACTAGGAA+AGG | + | chr4.2:34642175-34642194 | MS.gene90964:CDS | 35.0% | |
| CGTCTCATGTTATCGTAATT+TGG | - | chr4.2:34641541-34641560 | None:intergenic | 35.0% | |
| CTTGGGAATCTGTTCATTAA+TGG | + | chr4.2:34640672-34640691 | MS.gene90964:CDS | 35.0% | |
| GAGTTTCGGAGAATTACAAA+GGG | + | chr4.2:34638726-34638745 | MS.gene90964:CDS | 35.0% | |
| GCAAAATTATTGTTCCCGTA+AGG | - | chr4.2:34642141-34642160 | None:intergenic | 35.0% | |
| TACATAGTGTTGTCGAATAG+TGG | - | chr4.2:34640823-34640842 | None:intergenic | 35.0% | |
| TACCTTAAACATTATTGCGC+TGG | - | chr4.2:34641945-34641964 | None:intergenic | 35.0% | |
| TGGTTATTATGCAGATAGGA+GGG | - | chr4.2:34641465-34641484 | None:intergenic | 35.0% | |
| TGTCCAAGAAATATGGGAAT+TGG | + | chr4.2:34640452-34640471 | MS.gene90964:CDS | 35.0% | |
| TTGGTTATTATGCAGATAGG+AGG | - | chr4.2:34641466-34641485 | None:intergenic | 35.0% | |
| TTTGTTTGCGTTCTTAAGCA+TGG | + | chr4.2:34639364-34639383 | MS.gene90964:intron | 35.0% | |
| ! | ACAACCCTTATTTCCAATGA+AGG | - | chr4.2:34639652-34639671 | None:intergenic | 35.0% |
| ! | ACGGGAACAATAATTTTGCA+TGG | + | chr4.2:34642142-34642161 | MS.gene90964:CDS | 35.0% |
| ! | ACTTTTCATCTGTTGAACAC+TGG | + | chr4.2:34642011-34642030 | MS.gene90964:intron | 35.0% |
| ! | AGCGCAATAATGTTTAAGGT+AGG | + | chr4.2:34641944-34641963 | MS.gene90964:intron | 35.0% |
| ! | ATCGTCGATTGCAGAAATAT+CGG | + | chr4.2:34640760-34640779 | MS.gene90964:intron | 35.0% |
| ! | CGGGAACAATAATTTTGCAT+GGG | + | chr4.2:34642143-34642162 | MS.gene90964:CDS | 35.0% |
| ! | GAAAAATATGCTGGTCTACT+TGG | + | chr4.2:34640654-34640673 | MS.gene90964:CDS | 35.0% |
| ! | GTTTGTTCAAGTGGATTCAT+TGG | + | chr4.2:34638761-34638780 | MS.gene90964:CDS | 35.0% |
| ! | TCTTCAAAATTGGTGTCTGT+AGG | - | chr4.2:34641692-34641711 | None:intergenic | 35.0% |
| ! | TTAACGCATTGACAAACATG+TGG | - | chr4.2:34642237-34642256 | None:intergenic | 35.0% |
| !! | TGCAGAAATATCGGTTTGTT+CGG | + | chr4.2:34640769-34640788 | MS.gene90964:intron | 35.0% |
| !! | TTACAAAGGGTTGATACTTG+CGG | + | chr4.2:34638739-34638758 | MS.gene90964:CDS | 35.0% |
| !!! | GGTTGTTTGTTTTACGTGTT+TGG | + | chr4.2:34639666-34639685 | MS.gene90964:intron | 35.0% |
| !!! | GTTTTACGTGTTTGGTTCTA+GGG | + | chr4.2:34639674-34639693 | MS.gene90964:intron | 35.0% |
| !!! | TGTTTTACGTGTTTGGTTCT+AGG | + | chr4.2:34639673-34639692 | MS.gene90964:intron | 35.0% |
| AACAATTGATCCCATGATGC+AGG | - | chr4.2:34640394-34640413 | None:intergenic | 40.0% | |
| AAGGAAAGGCTTCAGAAGAT+GGG | + | chr4.2:34640351-34640370 | MS.gene90964:CDS | 40.0% | |
| ATCTGCCAACAGTGATTACT+GGG | + | chr4.2:34640128-34640147 | MS.gene90964:intron | 40.0% | |
| ATGCTGTCAAATAGAGGCTT+TGG | - | chr4.2:34640895-34640914 | None:intergenic | 40.0% | |
| ATTCTGCACTCACCTTGTTA+AGG | - | chr4.2:34641110-34641129 | None:intergenic | 40.0% | |
| CAAAACTACTGAAACCGTTG+CGG | - | chr4.2:34640599-34640618 | None:intergenic | 40.0% | |
| CCAAACAGCCTCACAAATAA+GGG | - | chr4.2:34639146-34639165 | None:intergenic | 40.0% | |
| CCTTTCCTTCAACAAGAAGT+GGG | - | chr4.2:34640340-34640359 | None:intergenic | 40.0% | |
| CGTGGCTTATATTTATGCTC+CGG | + | chr4.2:34640165-34640184 | MS.gene90964:CDS | 40.0% | |
| CTCACAAATAAGGGTCTGTT+TGG | - | chr4.2:34639137-34639156 | None:intergenic | 40.0% | |
| CTTATCTACTAGAGCCACTT+TGG | + | chr4.2:34640009-34640028 | MS.gene90964:CDS | 40.0% | |
| GCAATAAAGCTTACCCTTGA+TGG | + | chr4.2:34641006-34641025 | MS.gene90964:CDS | 40.0% | |
| GGAGTTTCGGAGAATTACAA+AGG | + | chr4.2:34638725-34638744 | MS.gene90964:CDS | 40.0% | |
| GGTTATTATGCAGATAGGAG+GGG | - | chr4.2:34641464-34641483 | None:intergenic | 40.0% | |
| GTTATGAGCATTAAGGCCAT+TGG | + | chr4.2:34640979-34640998 | MS.gene90964:CDS | 40.0% | |
| GTTTCGGTTATAATCTGCAC+CGG | - | chr4.2:34641144-34641163 | None:intergenic | 40.0% | |
| TATCTGCCAACAGTGATTAC+TGG | + | chr4.2:34640127-34640146 | MS.gene90964:intron | 40.0% | |
| TATGATTTATGCTGCCGCAA+CGG | + | chr4.2:34640582-34640601 | MS.gene90964:CDS | 40.0% | |
| TATGTTGTGGATCTGATCCA+AGG | - | chr4.2:34639018-34639037 | None:intergenic | 40.0% | |
| TCCAAACAGCCTCACAAATA+AGG | - | chr4.2:34639147-34639166 | None:intergenic | 40.0% | |
| TGAAGTGACAGTATCTTCTC+TGG | + | chr4.2:34642305-34642324 | MS.gene90964:intron | 40.0% | |
| TGCCAGCGCAATAATGTTTA+AGG | + | chr4.2:34641940-34641959 | MS.gene90964:CDS | 40.0% | |
| TGGCCAATTCCCATATTTCT+TGG | - | chr4.2:34640458-34640477 | None:intergenic | 40.0% | |
| ! | ATACTTGCGGTTTGTTCAAG+TGG | + | chr4.2:34638752-34638771 | MS.gene90964:CDS | 40.0% |
| ! | CAAACAGACCCTTATTTGTG+AGG | + | chr4.2:34639135-34639154 | MS.gene90964:intron | 40.0% |
| ! | GAAGATACTGTCACTTCATG+AGG | - | chr4.2:34642303-34642322 | None:intergenic | 40.0% |
| ! | GAATTTGGAGTGTGTTCTTG+TGG | - | chr4.2:34640432-34640451 | None:intergenic | 40.0% |
| ! | TGCGTTCTTAAGCATGGTTT+TGG | + | chr4.2:34639370-34639389 | MS.gene90964:intron | 40.0% |
| !! | AGCATAGCTTCTGAGATATG+TGG | + | chr4.2:34642103-34642122 | MS.gene90964:CDS | 40.0% |
| !! | GTTTTAGTCTGAATGTGGGT+TGG | + | chr4.2:34639578-34639597 | MS.gene90964:intron | 40.0% |
| !! | TTTGCATTACAGGATTGGTC+TGG | + | chr4.2:34642067-34642086 | MS.gene90964:intron | 40.0% |
| !!! | GTTTTGAAATTTGCAGGGGT+TGG | + | chr4.2:34639978-34639997 | MS.gene90964:intron | 40.0% |
| !!! | TGGACGCAAATTTTCAAGTC+TGG | + | chr4.2:34641190-34641209 | MS.gene90964:intron | 40.0% |
| !!! | TTCAACTATTTTTCAGGCCC+TGG | + | chr4.2:34641853-34641872 | MS.gene90964:intron | 40.0% |
| ACAGTATCTTCTCTGGTGCA+GGG | + | chr4.2:34642312-34642331 | MS.gene90964:intron | 45.0% | |
| AGATTCCACAAAGTGCGTTG+AGG | + | chr4.2:34642358-34642377 | MS.gene90964:CDS | 45.0% | |
| AGCAATGCTCTTTCTCTCTC+AGG | + | chr4.2:34640059-34640078 | MS.gene90964:intron | 45.0% | |
| AGGAAAGGCTTCAGAAGATG+GGG | + | chr4.2:34640352-34640371 | MS.gene90964:CDS | 45.0% | |
| AGGATGTTTGTCCTGCATCA+TGG | + | chr4.2:34640380-34640399 | MS.gene90964:CDS | 45.0% | |
| AGGTGTGGGTCAGTAATAAC+GGG | + | chr4.2:34641512-34641531 | MS.gene90964:intron | 45.0% | |
| ATTATGCAGATAGGAGGGGA+AGG | - | chr4.2:34641460-34641479 | None:intergenic | 45.0% | |
| CAGGTGTGGGTCAGTAATAA+CGG | + | chr4.2:34641511-34641530 | MS.gene90964:intron | 45.0% | |
| CCCACTTCTTGTTGAAGGAA+AGG | + | chr4.2:34640337-34640356 | MS.gene90964:CDS | 45.0% | |
| CTCTTTCTCTCTCAGGTAGA+AGG | + | chr4.2:34640066-34640085 | MS.gene90964:intron | 45.0% | |
| CTGTGTAACGACGCATATTG+TGG | - | chr4.2:34641079-34641098 | None:intergenic | 45.0% | |
| GAAGGAAAGGCTTCAGAAGA+TGG | + | chr4.2:34640350-34640369 | MS.gene90964:CDS | 45.0% | |
| GCCTTTCCTTCAACAAGAAG+TGG | - | chr4.2:34640341-34640360 | None:intergenic | 45.0% | |
| GGATGTTTGTCCTGCATCAT+GGG | + | chr4.2:34640381-34640400 | MS.gene90964:CDS | 45.0% | |
| GGTTGCATCGAATGTATCCA+GGG | - | chr4.2:34641873-34641892 | None:intergenic | 45.0% | |
| TCTGCCAACAGTGATTACTG+GGG | + | chr4.2:34640129-34640148 | MS.gene90964:intron | 45.0% | |
| TGGATTCATCACCGTCCTTA+CGG | + | chr4.2:34642123-34642142 | MS.gene90964:CDS | 45.0% | |
| TGGTTGCATCGAATGTATCC+AGG | - | chr4.2:34641874-34641893 | None:intergenic | 45.0% | |
| TTCATCCTCAACGCACTTTG+TGG | - | chr4.2:34642366-34642385 | None:intergenic | 45.0% | |
| TTGAAATTTGCAGGGGTTGG+TGG | + | chr4.2:34639981-34640000 | MS.gene90964:intron | 45.0% | |
| TTTGGCCCACTTCTTGTTGA+AGG | + | chr4.2:34640332-34640351 | MS.gene90964:CDS | 45.0% | |
| ! | AAATAGAGGCTTTGGCGTAG+CGG | - | chr4.2:34640887-34640906 | None:intergenic | 45.0% |
| ! | ATCTACTAGAGCCACTTTGG+TGG | + | chr4.2:34640012-34640031 | MS.gene90964:CDS | 45.0% |
| ! | CCCTTATTTGTGAGGCTGTT+TGG | + | chr4.2:34639143-34639162 | MS.gene90964:intron | 45.0% |
| ! | CGCAACGGTTTCAGTAGTTT+TGG | + | chr4.2:34640597-34640616 | MS.gene90964:CDS | 45.0% |
| ! | TCTACTAGAGCCACTTTGGT+GGG | + | chr4.2:34640013-34640032 | MS.gene90964:CDS | 45.0% |
| !! | ACAAGAAGAGCATCCCTATG+AGG | - | chr4.2:34641335-34641354 | None:intergenic | 45.0% |
| !! | ATTACAGGATTGGTCTGGTC+AGG | + | chr4.2:34642072-34642091 | MS.gene90964:intron | 45.0% |
| !! | TTACGTGTTTGGTTCTAGGG+TGG | + | chr4.2:34639677-34639696 | MS.gene90964:intron | 45.0% |
| AATCACGGTCACAGCCTCAT+AGG | + | chr4.2:34641318-34641337 | MS.gene90964:intron | 50.0% | |
| AATTGGCCACTCAACCAGGT+TGG | + | chr4.2:34640469-34640488 | MS.gene90964:intron | 50.0% | |
| AGAGGAGTGACTAGAACTGC+CGG | - | chr4.2:34640187-34640206 | None:intergenic | 50.0% | |
| ATCACGGTCACAGCCTCATA+GGG | + | chr4.2:34641319-34641338 | MS.gene90964:intron | 50.0% | |
| ATGGGAGATACAAGCCAACC+TGG | - | chr4.2:34640486-34640505 | None:intergenic | 50.0% | |
| GAAGTGGGCCAAAACAGAAC+TGG | - | chr4.2:34640325-34640344 | None:intergenic | 50.0% | |
| GACAGTATCTTCTCTGGTGC+AGG | + | chr4.2:34642311-34642330 | MS.gene90964:intron | 50.0% | |
| GAGTGTGTTCTTGTGGTGCA+TGG | - | chr4.2:34640425-34640444 | None:intergenic | 50.0% | |
| GCTTCCCCAGTAATCACTGT+TGG | - | chr4.2:34640136-34640155 | None:intergenic | 50.0% | |
| GGAAAGGCTTCAGAAGATGG+GGG | + | chr4.2:34640353-34640372 | MS.gene90964:CDS | 50.0% | |
| GGATTCATCACCGTCCTTAC+GGG | + | chr4.2:34642124-34642143 | MS.gene90964:CDS | 50.0% | |
| TACAAGCCAACCTGGTTGAG+TGG | - | chr4.2:34640478-34640497 | None:intergenic | 50.0% | |
| TCTTACACTAGTGTGGTCCC+AGG | + | chr4.2:34641245-34641264 | MS.gene90964:intron | 50.0% | |
| TGGGGAAGCTGCAAATTTCG+TGG | + | chr4.2:34640147-34640166 | MS.gene90964:CDS | 50.0% | |
| ! | AATAGAGGCTTTGGCGTAGC+GGG | - | chr4.2:34640886-34640905 | None:intergenic | 50.0% |
| ! | GCAGTTCTAGTCACTCCTCT+TGG | + | chr4.2:34640187-34640206 | MS.gene90964:CDS | 50.0% |
| ! | TGATCACGAGTTTTCGGCCT+TGG | + | chr4.2:34638998-34639017 | MS.gene90964:intron | 50.0% |
| !! | CTTAAACGTGCTGCTTCACG+CGG | + | chr4.2:34638812-34638831 | MS.gene90964:CDS | 50.0% |
| !! | CTTCAGAAGATGGGGGTGTT+AGG | + | chr4.2:34640360-34640379 | MS.gene90964:CDS | 50.0% |
| ACAGAAGAGGCTTTGCCTCC+TGG | - | chr4.2:34641266-34641285 | None:intergenic | 55.0% | |
| ACCATGCCAACCCACCAAAG+TGG | - | chr4.2:34640026-34640045 | None:intergenic | 55.0% | |
| ATGATGCTGAGTGCGCCAAG+AGG | - | chr4.2:34640205-34640224 | None:intergenic | 55.0% | |
| CAGAAGAGGCTTTGCCTCCT+GGG | - | chr4.2:34641265-34641284 | None:intergenic | 55.0% | |
| GCGCACTCAGCATCATTGTC+AGG | + | chr4.2:34640209-34640228 | MS.gene90964:CDS | 55.0% | |
| TACACTAGTGTGGTCCCAGG+AGG | + | chr4.2:34641248-34641267 | MS.gene90964:intron | 55.0% | |
| TGGGAATTGGCCACTCAACC+AGG | + | chr4.2:34640465-34640484 | MS.gene90964:CDS | 55.0% | |
| ! | CTAGAGCCACTTTGGTGGGT+TGG | + | chr4.2:34640017-34640036 | MS.gene90964:CDS | 55.0% |
| !! | CGTGTTTGGTTCTAGGGTGG+CGG | + | chr4.2:34639680-34639699 | MS.gene90964:intron | 55.0% |
| ! | CTGGTGCAGGGAGCATGTCA+TGG | + | chr4.2:34642324-34642343 | MS.gene90964:intron | 60.0% |
| !! | GCCACTTTGGTGGGTTGGCA+TGG | + | chr4.2:34640022-34640041 | MS.gene90964:CDS | 60.0% |
| GCTTCACGCGGTACTCGTGC+TGG | + | chr4.2:34638824-34638843 | MS.gene90964:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 34638722 | 34642427 | 34638722 | ID=MS.gene90964 |
| chr4.2 | mRNA | 34638722 | 34642427 | 34638722 | ID=MS.gene90964.t1;Parent=MS.gene90964 |
| chr4.2 | exon | 34638722 | 34638845 | 34638722 | ID=MS.gene90964.t1.exon1;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34638722 | 34638845 | 34638722 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34639994 | 34640050 | 34639994 | ID=MS.gene90964.t1.exon2;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34639994 | 34640050 | 34639994 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34640140 | 34640230 | 34640140 | ID=MS.gene90964.t1.exon3;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34640140 | 34640230 | 34640140 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34640326 | 34640486 | 34640326 | ID=MS.gene90964.t1.exon4;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34640326 | 34640486 | 34640326 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34640578 | 34640705 | 34640578 | ID=MS.gene90964.t1.exon5;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34640578 | 34640705 | 34640578 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34640979 | 34641116 | 34640979 | ID=MS.gene90964.t1.exon6;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34640979 | 34641116 | 34640979 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34641869 | 34641961 | 34641869 | ID=MS.gene90964.t1.exon7;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34641869 | 34641961 | 34641869 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34642079 | 34642196 | 34642079 | ID=MS.gene90964.t1.exon8;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34642079 | 34642196 | 34642079 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| chr4.2 | exon | 34642333 | 34642427 | 34642333 | ID=MS.gene90964.t1.exon9;Parent=MS.gene90964.t1 |
| chr4.2 | CDS | 34642333 | 34642427 | 34642333 | ID=cds.MS.gene90964.t1;Parent=MS.gene90964.t1 |
| Gene Sequence |
| Protein sequence |
