Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057722.t1 | XP_013456503.1 | 98.8 | 334 | 4 | 0 | 1 | 334 | 1 | 334 | 9.20E-180 | 639.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057722.t1 | Q8GWX2 | 76.7 | 322 | 71 | 2 | 4 | 324 | 3 | 321 | 5.3e-136 | 485.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057722.t1 | A0A072UL97 | 98.8 | 334 | 4 | 0 | 1 | 334 | 1 | 334 | 6.6e-180 | 639.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057722 | MS.gene002040 | PPI |
| MS.gene057722 | MS.gene00614 | PPI |
| MS.gene057722 | MS.gene90964 | PPI |
| MS.gene057722 | MS.gene047204 | PPI |
| MS.gene057722 | MS.gene045378 | PPI |
| MS.gene057722 | MS.gene77513 | PPI |
| MS.gene77513 | MS.gene057722 | PPI |
| MS.gene057722 | MS.gene072062 | PPI |
| MS.gene057722 | MS.gene75691 | PPI |
| MS.gene057722 | MS.gene79876 | PPI |
| MS.gene057722 | MS.gene52088 | PPI |
| MS.gene52088 | MS.gene057722 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057722.t1 | MTR_4g074050 | 98.802 | 334 | 4 | 0 | 1 | 334 | 1 | 334 | 0.0 | 676 |
| MS.gene057722.t1 | MTR_3g097220 | 62.687 | 335 | 115 | 2 | 1 | 331 | 1 | 329 | 4.18e-149 | 423 |
| MS.gene057722.t1 | MTR_3g097220 | 63.110 | 328 | 114 | 1 | 1 | 321 | 1 | 328 | 1.75e-148 | 422 |
| MS.gene057722.t1 | MTR_8g095060 | 60.058 | 343 | 124 | 3 | 4 | 333 | 3 | 345 | 2.13e-147 | 419 |
| MS.gene057722.t1 | MTR_5g090020 | 66.887 | 302 | 98 | 2 | 1 | 300 | 1 | 302 | 8.67e-142 | 405 |
| MS.gene057722.t1 | MTR_2g006070 | 62.081 | 298 | 113 | 0 | 4 | 301 | 15 | 312 | 3.36e-136 | 390 |
| MS.gene057722.t1 | MTR_8g081650 | 59.596 | 297 | 119 | 1 | 1 | 296 | 1 | 297 | 8.84e-130 | 374 |
| MS.gene057722.t1 | MTR_3g083960 | 58.117 | 308 | 128 | 1 | 1 | 307 | 1 | 308 | 6.37e-125 | 361 |
| MS.gene057722.t1 | MTR_5g090020 | 64.315 | 241 | 86 | 0 | 60 | 300 | 17 | 257 | 7.40e-108 | 317 |
| MS.gene057722.t1 | MTR_2g006070 | 63.478 | 230 | 84 | 0 | 4 | 233 | 15 | 244 | 1.04e-101 | 299 |
| MS.gene057722.t1 | MTR_3g097220 | 57.576 | 231 | 91 | 1 | 98 | 321 | 1 | 231 | 2.54e-92 | 275 |
| MS.gene057722.t1 | MTR_2g006070 | 62.162 | 185 | 70 | 0 | 4 | 188 | 15 | 199 | 7.84e-75 | 229 |
| MS.gene057722.t1 | MTR_5g049870 | 59.677 | 62 | 21 | 1 | 239 | 300 | 166 | 223 | 2.60e-13 | 69.3 |
| MS.gene057722.t1 | MTR_6g033100 | 19.926 | 271 | 197 | 4 | 54 | 307 | 57 | 324 | 4.00e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057722.t1 | AT2G21120 | 76.708 | 322 | 71 | 2 | 4 | 324 | 3 | 321 | 0.0 | 510 |
| MS.gene057722.t1 | AT4G38730 | 73.520 | 321 | 81 | 2 | 3 | 323 | 2 | 318 | 9.91e-175 | 488 |
| MS.gene057722.t1 | AT1G71900 | 63.758 | 298 | 108 | 0 | 4 | 301 | 17 | 314 | 4.22e-145 | 413 |
| MS.gene057722.t1 | AT1G71900 | 64.189 | 296 | 106 | 0 | 4 | 299 | 17 | 312 | 5.07e-145 | 413 |
| MS.gene057722.t1 | AT1G34470 | 62.081 | 298 | 113 | 0 | 4 | 301 | 17 | 314 | 3.84e-141 | 404 |
| MS.gene057722.t1 | AT4G09640 | 59.317 | 322 | 122 | 2 | 4 | 325 | 17 | 329 | 4.76e-133 | 384 |
| MS.gene057722.t1 | AT4G13800 | 61.513 | 304 | 116 | 1 | 5 | 307 | 7 | 310 | 2.17e-127 | 368 |
| MS.gene057722.t1 | AT4G13800 | 61.513 | 304 | 116 | 1 | 5 | 307 | 7 | 310 | 2.17e-127 | 368 |
| MS.gene057722.t1 | AT4G13800 | 61.513 | 304 | 116 | 1 | 5 | 307 | 7 | 310 | 2.17e-127 | 368 |
| MS.gene057722.t1 | AT4G13800 | 61.513 | 304 | 116 | 1 | 5 | 307 | 7 | 310 | 2.17e-127 | 368 |
| MS.gene057722.t1 | AT3G23870 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.18e-120 | 349 |
| MS.gene057722.t1 | AT3G23870 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.18e-120 | 349 |
| MS.gene057722.t1 | AT3G23870 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.18e-120 | 349 |
| MS.gene057722.t1 | AT3G23870 | 61.184 | 304 | 117 | 1 | 5 | 307 | 7 | 310 | 4.18e-120 | 349 |
| MS.gene057722.t1 | AT4G13800 | 63.462 | 260 | 95 | 0 | 5 | 264 | 7 | 266 | 9.84e-111 | 323 |
| MS.gene057722.t1 | AT4G13800 | 63.462 | 260 | 95 | 0 | 5 | 264 | 7 | 266 | 9.84e-111 | 323 |
| MS.gene057722.t1 | AT4G13800 | 61.803 | 233 | 89 | 0 | 5 | 237 | 7 | 239 | 5.17e-93 | 277 |
| MS.gene057722.t1 | AT4G13800 | 61.803 | 233 | 89 | 0 | 5 | 237 | 7 | 239 | 5.17e-93 | 277 |
| MS.gene057722.t1 | AT4G13800 | 61.803 | 233 | 89 | 0 | 5 | 237 | 7 | 239 | 5.17e-93 | 277 |
| MS.gene057722.t1 | AT4G13800 | 61.803 | 233 | 89 | 0 | 5 | 237 | 7 | 239 | 5.17e-93 | 277 |
| MS.gene057722.t1 | AT3G23870 | 56.502 | 223 | 96 | 1 | 86 | 307 | 8 | 230 | 6.15e-89 | 267 |
Find 85 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTTCTTGGACAGAATT+TGG | 0.146072 | 4.4:+35960915 | None:intergenic |
| TGCCAGCGCAATAATGTTTA+AGG | 0.152481 | 4.4:-35959483 | MS.gene057722:intron |
| CTTGGGAATCTGTTCATTAA+TGG | 0.160246 | 4.4:-35960687 | MS.gene057722:CDS |
| CAAATTCTGTCCAAGAAATA+TGG | 0.182740 | 4.4:-35960914 | MS.gene057722:CDS |
| GCAATAAAGCTTACCCTTGA+TGG | 0.257921 | 4.4:-35960350 | MS.gene057722:CDS |
| GAACACCTTATCGTTATAAA+TGG | 0.262491 | 4.4:-35959003 | MS.gene057722:CDS |
| CGCAACGGTTTCAGTAGTTT+TGG | 0.286333 | 4.4:-35960762 | MS.gene057722:CDS |
| TGGCCAATTCCCATATTTCT+TGG | 0.298454 | 4.4:+35960904 | None:intergenic |
| ATATATTGCCAGTTCTGTTT+TGG | 0.310127 | 4.4:-35961045 | MS.gene057722:intron |
| TTGGGAATCTGTTCATTAAT+GGG | 0.315254 | 4.4:-35960686 | MS.gene057722:CDS |
| TATTCAGGTTATGAGCATTA+AGG | 0.365174 | 4.4:-35960384 | MS.gene057722:intron |
| TATCTGCCAACAGTGATTAC+TGG | 0.376516 | 4.4:-35961232 | MS.gene057722:intron |
| TGTCCAAGAAATATGGGAAT+TGG | 0.400693 | 4.4:-35960907 | MS.gene057722:CDS |
| TATAGTAGTAATGGGAGTTT+CGG | 0.402619 | 4.4:-35962966 | None:intergenic |
| TTCATTAATGGGTTCACTTA+CGG | 0.404625 | 4.4:-35960675 | MS.gene057722:intron |
| GGATTCATCACCGTCCTTAC+GGG | 0.409126 | 4.4:-35959293 | MS.gene057722:CDS |
| TTTGGCCCACTTCTTGTTGA+AGG | 0.412006 | 4.4:-35961027 | MS.gene057722:CDS |
| TGGATTCATCACCGTCCTTA+CGG | 0.413632 | 4.4:-35959294 | MS.gene057722:CDS |
| TTGAAATTTGCAGGGGTTGG+TGG | 0.419893 | 4.4:-35961378 | MS.gene057722:intron |
| ATTCTGCACTCACCTTGTTA+AGG | 0.421446 | 4.4:+35960249 | None:intergenic |
| GTTTGTTCAAGTGGATTCAT+TGG | 0.433985 | 4.4:-35962917 | MS.gene057722:CDS |
| CTTATCTACTAGAGCCACTT+TGG | 0.445524 | 4.4:-35961350 | MS.gene057722:CDS |
| CCCACTTCTTGTTGAAGGAA+AGG | 0.449464 | 4.4:-35961022 | MS.gene057722:CDS |
| CTAGAGCCACTTTGGTGGGT+TGG | 0.450700 | 4.4:-35961342 | MS.gene057722:CDS |
| CCTTATCGTTATAAATGGTT+CGG | 0.453250 | 4.4:-35958998 | MS.gene057722:CDS |
| GAAGGAAAGGCTTCAGAAGA+TGG | 0.459990 | 4.4:-35961009 | MS.gene057722:CDS |
| ATTACAGGATTGGTCTGGTC+AGG | 0.460119 | 4.4:-35959345 | MS.gene057722:intron |
| AGGTTCAAAATTTAAAATCA+AGG | 0.462094 | 4.4:+35960739 | None:intergenic |
| TTCATCCTCAACGCACTTTG+CGG | 0.462155 | 4.4:+35959023 | None:intergenic |
| AAATTCTGTCCAAGAAATAT+GGG | 0.463697 | 4.4:-35960913 | MS.gene057722:CDS |
| CTATTTGACTTATTCCATCA+AGG | 0.474956 | 4.4:+35960336 | None:intergenic |
| TGGTTGCATCGAATGTATCC+AGG | 0.479552 | 4.4:+35959552 | None:intergenic |
| GAGTGTGTTCTTGTGGTGCA+TGG | 0.480134 | 4.4:+35960937 | None:intergenic |
| TGGGGAAGCTGCAAATTTCG+TGG | 0.490031 | 4.4:-35961212 | MS.gene057722:CDS |
| ATACTTGCGGTTTGTTCAAG+TGG | 0.491654 | 4.4:-35962926 | MS.gene057722:CDS |
| CCGAACCATTTATAACGATA+AGG | 0.492627 | 4.4:+35958998 | None:intergenic |
| GCCACTTTGGTGGGTTGGCA+TGG | 0.496440 | 4.4:-35961337 | MS.gene057722:CDS |
| GTGAACATCACATAATATAC+AGG | 0.497099 | 4.4:+35959521 | None:intergenic |
| TAGTTTCATCTTGAAGAAGA+AGG | 0.499105 | 4.4:-35962891 | MS.gene057722:CDS |
| TACCTTAAACATTATTGCGC+TGG | 0.499360 | 4.4:+35959481 | None:intergenic |
| ATCTGCCAACAGTGATTACT+GGG | 0.505809 | 4.4:-35961231 | MS.gene057722:intron |
| GTTATGAGCATTAAGGCCAT+TGG | 0.506421 | 4.4:-35960377 | MS.gene057722:CDS |
| GCAGTTCTAGTCACTCCTCT+TGG | 0.506507 | 4.4:-35961172 | MS.gene057722:CDS |
| AAGGAAAGGCTTCAGAAGAT+GGG | 0.508144 | 4.4:-35961008 | MS.gene057722:CDS |
| GCCTTTCCTTCAACAAGAAG+TGG | 0.508462 | 4.4:+35961021 | None:intergenic |
| TCTACTAGAGCCACTTTGGT+GGG | 0.510157 | 4.4:-35961346 | MS.gene057722:CDS |
| CTGGTGCAGGGAGCATGTCA+TGG | 0.510195 | 4.4:-35959062 | MS.gene057722:intron |
| TTTGCATTACAGGATTGGTC+TGG | 0.512734 | 4.4:-35959350 | MS.gene057722:intron |
| GCGCACTCAGCATCATTGTC+AGG | 0.519115 | 4.4:-35961150 | MS.gene057722:intron |
| AACAATTGATCCCACGATGC+AGG | 0.520476 | 4.4:+35960968 | None:intergenic |
| GAATTTGGAGTGTGTTCTTG+TGG | 0.522100 | 4.4:+35960930 | None:intergenic |
| CGTGGCTTATATTTATGCTC+CGG | 0.534616 | 4.4:-35961194 | MS.gene057722:CDS |
| AAGCTTTATTGCAATTCCAA+TGG | 0.536342 | 4.4:+35960361 | None:intergenic |
| TGGGAATTGGCCACTCAACC+AGG | 0.542211 | 4.4:-35960894 | MS.gene057722:intron |
| TATTTGACTTATTCCATCAA+GGG | 0.543563 | 4.4:+35960337 | None:intergenic |
| GCTTCACGCGGTACTCGTGC+AGG | 0.548482 | 4.4:-35962854 | MS.gene057722:intron |
| ATCTACTAGAGCCACTTTGG+TGG | 0.549132 | 4.4:-35961347 | MS.gene057722:CDS |
| AAATAGCTTATCCTCAGACT+TGG | 0.552061 | 4.4:-35960319 | MS.gene057722:CDS |
| CTGTGTAACGACGCATATTG+TGG | 0.552275 | 4.4:+35960280 | None:intergenic |
| CAAGAAGAATCTACTAGGAA+AGG | 0.554656 | 4.4:-35959242 | MS.gene057722:intron |
| AGTTTCATCTTGAAGAAGAA+GGG | 0.554873 | 4.4:-35962890 | MS.gene057722:CDS |
| TATGATTTATGCCGCCGCAA+CGG | 0.555705 | 4.4:-35960777 | MS.gene057722:CDS |
| GCAAAATTATTGTTCCCGTA+AGG | 0.557492 | 4.4:+35959279 | None:intergenic |
| GGATGTTTGTCCTGCATCGT+GGG | 0.557613 | 4.4:-35960978 | MS.gene057722:CDS |
| AAGAACAAGAAGAATCTACT+AGG | 0.560901 | 4.4:-35959247 | MS.gene057722:CDS |
| AATTATTGTTCCCGTAAGGA+CGG | 0.583221 | 4.4:+35959283 | None:intergenic |
| AGAGGAGTGACTAGAACTGC+CGG | 0.586116 | 4.4:+35961175 | None:intergenic |
| TTACAAAGGTTTGATACTTG+CGG | 0.591176 | 4.4:-35962939 | MS.gene057722:CDS |
| AACTACTGAAACCGTTGCGG+CGG | 0.596437 | 4.4:+35960766 | None:intergenic |
| TACATGCCAACCTGGTTGAG+TGG | 0.602894 | 4.4:+35960884 | None:intergenic |
| GGAGTTTCGGAGAATTACAA+AGG | 0.605243 | 4.4:-35962953 | MS.gene057722:CDS |
| CCTTTCCTTCAACAAGAAGT+GGG | 0.611534 | 4.4:+35961022 | None:intergenic |
| AGGAAAGGCTTCAGAAGATG+GGG | 0.615805 | 4.4:-35961007 | MS.gene057722:CDS |
| AGCATAGCTTCTGAGATATG+TGG | 0.619389 | 4.4:-35959314 | MS.gene057722:CDS |
| ACCATGCCAACCCACCAAAG+TGG | 0.619871 | 4.4:+35961336 | None:intergenic |
| CTTAAACGTGCTGCTTCACG+CGG | 0.625267 | 4.4:-35962866 | MS.gene057722:CDS |
| AGGATGTTTGTCCTGCATCG+TGG | 0.637381 | 4.4:-35960979 | MS.gene057722:CDS |
| ACAGTTGAATTACCTTAACA+AGG | 0.637833 | 4.4:-35960261 | MS.gene057722:intron |
| GGTTGCATCGAATGTATCCA+GGG | 0.642191 | 4.4:+35959553 | None:intergenic |
| ATAATATACAGGAGTTACAA+TGG | 0.642946 | 4.4:+35959532 | None:intergenic |
| ATGATGCTGAGTGCGCCAAG+AGG | 0.665488 | 4.4:+35961157 | None:intergenic |
| AGATTCCGCAAAGTGCGTTG+AGG | 0.668208 | 4.4:-35959028 | MS.gene057722:CDS |
| CAAAACTACTGAAACCGTTG+CGG | 0.690409 | 4.4:+35960763 | None:intergenic |
| GGAAAGGCTTCAGAAGATGG+GGG | 0.709721 | 4.4:-35961006 | MS.gene057722:CDS |
| TCTGCCAACAGTGATTACTG+GGG | 0.791567 | 4.4:-35961230 | MS.gene057722:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAAAAAAAAAAATTAC+AGG | + | chr4.4:35959782-35959801 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAATTTACAG+GGG | - | chr4.4:35959948-35959967 | MS.gene057722:intron | 10.0% |
| !! | TAAAATAAATTAGAAATTTC+TGG | - | chr4.4:35960824-35960843 | MS.gene057722:intron | 10.0% |
| !! | TCAAAAAAAAAAAAATTACA+GGG | + | chr4.4:35959781-35959800 | None:intergenic | 10.0% |
| !! | TCTTGAAAAAAAAATAAAAT+CGG | - | chr4.4:35959866-35959885 | MS.gene057722:intron | 10.0% |
| !! | AAAAAAAAAAAAATTACAGG+GGG | + | chr4.4:35959779-35959798 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAATTTACAGG+GGG | - | chr4.4:35959949-35959968 | MS.gene057722:intron | 15.0% |
| !! | AATTTAAGAGTAAACTAAAA+TGG | + | chr4.4:35961083-35961102 | None:intergenic | 15.0% |
| !! | ATTTAAGAGTAAACTAAAAT+GGG | + | chr4.4:35961082-35961101 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAATTACAG+GGG | + | chr4.4:35959780-35959799 | None:intergenic | 15.0% |
| !! | CAAAATTTCTTAAAAGAATA+AGG | + | chr4.4:35962328-35962347 | None:intergenic | 15.0% |
| !! | CTATTGTTTATTTAATATAC+TGG | - | chr4.4:35961751-35961770 | MS.gene057722:intron | 15.0% |
| !! | TAAACAATAGTTTATAGTTT+CGG | + | chr4.4:35961741-35961760 | None:intergenic | 15.0% |
| !!! | AAAACAATAATTTTTTACAG+GGG | + | chr4.4:35959809-35959828 | None:intergenic | 15.0% |
| !!! | AAAACAATTTTTTTTTACAG+GGG | - | chr4.4:35959919-35959938 | MS.gene057722:intron | 15.0% |
| !!! | AATGATTTTTTAAACTATTC+AGG | - | chr4.4:35961538-35961557 | MS.gene057722:intron | 15.0% |
| !!! | CAAAACAATAATTTTTTACA+GGG | + | chr4.4:35959810-35959829 | None:intergenic | 15.0% |
| !!! | CAAAACAATTTTTTTTTACA+GGG | - | chr4.4:35959918-35959937 | MS.gene057722:intron | 15.0% |
| !!! | TATGATAAAAATCATTTTGA+AGG | - | chr4.4:35961295-35961314 | MS.gene057722:intron | 15.0% |
| !!! | TCAAAACAATAATTTTTTAC+AGG | + | chr4.4:35959811-35959830 | None:intergenic | 15.0% |
| !!! | TCAAAACAATTTTTTTTTAC+AGG | - | chr4.4:35959917-35959936 | MS.gene057722:intron | 15.0% |
| !! | AAACTTTCATATTAGAATTC+AGG | + | chr4.4:35960020-35960039 | None:intergenic | 20.0% |
| !! | AACTTTCATATTAGAATTCA+GGG | + | chr4.4:35960019-35960038 | None:intergenic | 20.0% |
| !! | AATCATAAATTCTGTTGAAA+AGG | + | chr4.4:35961147-35961166 | None:intergenic | 20.0% |
| !! | ATAAGATTTCTCTATAACAA+TGG | - | chr4.4:35962826-35962845 | MS.gene057722:intron | 20.0% |
| !! | ATCATAAATTCTGTTGAAAA+GGG | + | chr4.4:35961146-35961165 | None:intergenic | 20.0% |
| !! | ATTGTTATAGAGAAATCTTA+TGG | + | chr4.4:35962827-35962846 | None:intergenic | 20.0% |
| !! | ATTTGTAAGTTTGTAACATT+TGG | + | chr4.4:35960420-35960439 | None:intergenic | 20.0% |
| !! | CAAAATCAAATTTAAGTCTT+CGG | - | chr4.4:35960465-35960484 | MS.gene057722:intron | 20.0% |
| !! | TCATGCATTAAATAAAATCA+AGG | + | chr4.4:35961797-35961816 | None:intergenic | 20.0% |
| !! | TCCTGAATAAAAATCATTAT+TGG | + | chr4.4:35962076-35962095 | None:intergenic | 20.0% |
| !! | TTCTATGTATTAATTGCAAT+AGG | + | chr4.4:35962145-35962164 | None:intergenic | 20.0% |
| !!! | AAACAATAATTTTTTACAGG+GGG | + | chr4.4:35959808-35959827 | None:intergenic | 20.0% |
| !!! | AAACAATTTTTTTTTACAGG+GGG | - | chr4.4:35959920-35959939 | MS.gene057722:intron | 20.0% |
| !!! | AAATAAAATCGGTTTTTGTT+TGG | - | chr4.4:35959877-35959896 | MS.gene057722:intron | 20.0% |
| !!! | AAATCATTATTGGCTTTTTT+TGG | + | chr4.4:35962066-35962085 | None:intergenic | 20.0% |
| !!! | AAGAAATTTTCGTTTTTGTT+TGG | + | chr4.4:35959850-35959869 | None:intergenic | 20.0% |
| !!! | AGAGTTGATCTATTTAAATT+AGG | - | chr4.4:35961954-35961973 | MS.gene057722:intron | 20.0% |
| !!! | AGGTTCAAAATTTAAAATCA+AGG | + | chr4.4:35961201-35961220 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTAGAATTTAGT+GGG | - | chr4.4:35959211-35959230 | MS.gene057722:intron | 20.0% |
| !!! | GTATATTTAGATTCACTTTT+GGG | + | chr4.4:35960507-35960526 | None:intergenic | 20.0% |
| !!! | GTGTTTTTAGTTATTTTGTA+AGG | - | chr4.4:35961865-35961884 | MS.gene057722:intron | 20.0% |
| !!! | TGTATATTTAGATTCACTTT+TGG | + | chr4.4:35960508-35960527 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTGAAATTTGCA+GGG | - | chr4.4:35960551-35960570 | MS.gene057722:intron | 20.0% |
| ! | AAATTCTGTCCAAGAAATAT+GGG | - | chr4.4:35961024-35961043 | MS.gene057722:CDS | 25.0% |
| ! | AATAACTAAAAACACAGAAG+AGG | + | chr4.4:35961860-35961879 | None:intergenic | 25.0% |
| ! | ATAATATACAGGAGTTACAA+TGG | + | chr4.4:35962408-35962427 | None:intergenic | 25.0% |
| ! | ATTAGCTAAAAGTGAGTTTA+AGG | - | chr4.4:35960318-35960337 | MS.gene057722:CDS | 25.0% |
| ! | CTTATTTAAGCTTAACTTAG+TGG | + | chr4.4:35959356-35959375 | None:intergenic | 25.0% |
| ! | TAGATGGACAATAAGAAAAT+TGG | + | chr4.4:35962282-35962301 | None:intergenic | 25.0% |
| ! | TATAACAAACAACTTATGAG+AGG | - | chr4.4:35959420-35959439 | MS.gene057722:intron | 25.0% |
| ! | TATTAGAATTCAGGGTTAAT+AGG | + | chr4.4:35960011-35960030 | None:intergenic | 25.0% |
| ! | TTGAATGTAAAATTCACGTT+TGG | - | chr4.4:35960392-35960411 | MS.gene057722:intron | 25.0% |
| !! | AATGATTTTTATTCAGGAGT+GGG | - | chr4.4:35962078-35962097 | MS.gene057722:intron | 25.0% |
| !! | GCCAATAATGATTTTTATTC+AGG | - | chr4.4:35962072-35962091 | MS.gene057722:intron | 25.0% |
| !! | TAATGATTTTTATTCAGGAG+TGG | - | chr4.4:35962077-35962096 | MS.gene057722:intron | 25.0% |
| !! | TATTTGACTTATTCCATCAA+GGG | + | chr4.4:35961603-35961622 | None:intergenic | 25.0% |
| !! | TTAAATTTTGAACCTCGTTA+TGG | - | chr4.4:35961206-35961225 | MS.gene057722:CDS | 25.0% |
| !!! | AAATTTGATTTTGGCATGTT+TGG | + | chr4.4:35960458-35960477 | None:intergenic | 25.0% |
| !!! | AATTTGATTTTGGCATGTTT+GGG | + | chr4.4:35960457-35960476 | None:intergenic | 25.0% |
| !!! | CGAAGACTTAAATTTGATTT+TGG | + | chr4.4:35960467-35960486 | None:intergenic | 25.0% |
| !!! | CTTTATGTTTTGAAATTTGC+AGG | - | chr4.4:35960550-35960569 | MS.gene057722:intron | 25.0% |
| !!! | GATTCAATTCTAGAATTTAG+TGG | - | chr4.4:35959210-35959229 | MS.gene057722:intron | 25.0% |
| !!! | TTATGTTTTGAAATTTGCAG+GGG | - | chr4.4:35960552-35960571 | MS.gene057722:intron | 25.0% |
| !!! | TTCAATTCTAGAATTTAGTG+GGG | - | chr4.4:35959212-35959231 | MS.gene057722:intron | 25.0% |
| !!! | TTTAGTTTTAGTCTGAATGT+GGG | - | chr4.4:35960128-35960147 | MS.gene057722:intron | 25.0% |
| !!! | TTTTAGTTTTAGTCTGAATG+TGG | - | chr4.4:35960127-35960146 | MS.gene057722:intron | 25.0% |
| !!! | TTTTTGAAATGAAACTCACA+TGG | - | chr4.4:35960673-35960692 | MS.gene057722:intron | 25.0% |
| !!! | TTTTTGGTTATTATGCAGAT+AGG | + | chr4.4:35962050-35962069 | None:intergenic | 25.0% |
| AACTACCTTCATTGGAAATA+AGG | - | chr4.4:35960222-35960241 | MS.gene057722:intron | 30.0% | |
| AAGAACAAGAAGAATCTACT+AGG | - | chr4.4:35962690-35962709 | MS.gene057722:intron | 30.0% | |
| ACACTGGTATATGAAAAGAT+TGG | - | chr4.4:35962547-35962566 | MS.gene057722:intron | 30.0% | |
| ACAGTTGAATTACCTTAACA+AGG | - | chr4.4:35961676-35961695 | MS.gene057722:intron | 30.0% | |
| ACTACCTTCATTGGAAATAA+GGG | - | chr4.4:35960223-35960242 | MS.gene057722:intron | 30.0% | |
| ACTTACTGATACAACATAGA+TGG | + | chr4.4:35962298-35962317 | None:intergenic | 30.0% | |
| AGTTTCATCTTGAAGAAGAA+GGG | - | chr4.4:35959047-35959066 | MS.gene057722:CDS | 30.0% | |
| ATAACAAAAAACCAAGTCTG+AGG | + | chr4.4:35961632-35961651 | None:intergenic | 30.0% | |
| ATGTACTAAATAACGTATCG+CGG | - | chr4.4:35961419-35961438 | MS.gene057722:intron | 30.0% | |
| CAAATTCTGTCCAAGAAATA+TGG | - | chr4.4:35961023-35961042 | MS.gene057722:CDS | 30.0% | |
| CAGAAATCAACTAACATATC+CGG | - | chr4.4:35960868-35960887 | MS.gene057722:intron | 30.0% | |
| CATATTTCTTGGACAGAATT+TGG | + | chr4.4:35961025-35961044 | None:intergenic | 30.0% | |
| CATTGTTAAATTCACTCACT+AGG | + | chr4.4:35959246-35959265 | None:intergenic | 30.0% | |
| CCTTATCGTTATAAATGGTT+CGG | - | chr4.4:35962939-35962958 | MS.gene057722:CDS | 30.0% | |
| CGGAAATAACCTATATTACA+GGG | - | chr4.4:35959977-35959996 | MS.gene057722:intron | 30.0% | |
| GAAATAACCTATATTACAGG+GGG | - | chr4.4:35959979-35959998 | MS.gene057722:intron | 30.0% | |
| GAACACCTTATCGTTATAAA+TGG | - | chr4.4:35962934-35962953 | MS.gene057722:CDS | 30.0% | |
| GGAAATAACCTATATTACAG+GGG | - | chr4.4:35959978-35959997 | MS.gene057722:intron | 30.0% | |
| GTAATAATGCTGTCAAATAG+AGG | + | chr4.4:35961482-35961501 | None:intergenic | 30.0% | |
| GTGAACATCACATAATATAC+AGG | + | chr4.4:35962419-35962438 | None:intergenic | 30.0% | |
| TAGTTTCATCTTGAAGAAGA+AGG | - | chr4.4:35959046-35959065 | MS.gene057722:CDS | 30.0% | |
| TATAGCACTGTAGCATATAA+CGG | + | chr4.4:35961378-35961397 | None:intergenic | 30.0% | |
| TATAGTTTCTTACACTAGTG+TGG | - | chr4.4:35961819-35961838 | MS.gene057722:intron | 30.0% | |
| TCACTATTCAACTATGTTTC+AGG | - | chr4.4:35962361-35962380 | MS.gene057722:intron | 30.0% | |
| TTACAAAGGTTTGATACTTG+CGG | - | chr4.4:35958998-35959017 | MS.gene057722:CDS | 30.0% | |
| TTAGTTACAACTACCTTCAT+TGG | - | chr4.4:35960214-35960233 | MS.gene057722:intron | 30.0% | |
| TTATGGACAGAAAAATATGC+TGG | - | chr4.4:35961223-35961242 | MS.gene057722:intron | 30.0% | |
| TTGCAACATTGCTTAAACAA+AGG | + | chr4.4:35962198-35962217 | None:intergenic | 30.0% | |
| TTGGGAATCTGTTCATTAAT+GGG | - | chr4.4:35961251-35961270 | MS.gene057722:intron | 30.0% | |
| ! | AAAAATATGCTGGTCTACTT+GGG | - | chr4.4:35961233-35961252 | MS.gene057722:intron | 30.0% |
| ! | ATAAGAAAATTGGTGTCTGT+AGG | + | chr4.4:35962272-35962291 | None:intergenic | 30.0% |
| ! | ATATATTGCCAGTTCTGTTT+TGG | - | chr4.4:35960892-35960911 | MS.gene057722:intron | 30.0% |
| ! | ATATTTTTCTGTCCATAACG+AGG | + | chr4.4:35961221-35961240 | None:intergenic | 30.0% |
| ! | ATGTTTCATGCATTCTTTTG+GGG | - | chr4.4:35962498-35962517 | MS.gene057722:intron | 30.0% |
| ! | CATGTTTCATGCATTCTTTT+GGG | - | chr4.4:35962497-35962516 | MS.gene057722:intron | 30.0% |
| ! | CCTGTAATATAGGTTATTTC+CGG | + | chr4.4:35959979-35959998 | None:intergenic | 30.0% |
| ! | CTATTTGACTTATTCCATCA+AGG | + | chr4.4:35961604-35961623 | None:intergenic | 30.0% |
| ! | GGTTGAATATTGTGATTTTG+TGG | - | chr4.4:35960845-35960864 | MS.gene057722:intron | 30.0% |
| ! | TATTCAGGTTATGAGCATTA+AGG | - | chr4.4:35961553-35961572 | MS.gene057722:intron | 30.0% |
| ! | TCATGTTTCATGCATTCTTT+TGG | - | chr4.4:35962496-35962515 | MS.gene057722:intron | 30.0% |
| ! | TGCAGAATTTTAAACTCATC+CGG | - | chr4.4:35961703-35961722 | MS.gene057722:intron | 30.0% |
| !! | AAGCTTTATTGCAATTCCAA+TGG | + | chr4.4:35961579-35961598 | None:intergenic | 30.0% |
| !! | ATTGATTTGCATTACAGGAT+TGG | - | chr4.4:35962582-35962601 | MS.gene057722:intron | 30.0% |
| !! | ATTTGATTTTGGCATGTTTG+GGG | + | chr4.4:35960456-35960475 | None:intergenic | 30.0% |
| !! | CTTTCATTGATTTGCATTAC+AGG | - | chr4.4:35962577-35962596 | MS.gene057722:intron | 30.0% |
| !! | GCTGTTTTCATAAGCTATTT+TGG | + | chr4.4:35959471-35959490 | None:intergenic | 30.0% |
| !! | TAATACGTTTAGCTTTCTCA+AGG | + | chr4.4:35960099-35960118 | None:intergenic | 30.0% |
| !! | TCAATTCTAGAATTTAGTGG+GGG | - | chr4.4:35959213-35959232 | MS.gene057722:intron | 30.0% |
| !! | TTCATTAATGGGTTCACTTA+CGG | - | chr4.4:35961262-35961281 | MS.gene057722:intron | 30.0% |
| !!! | GACTTGGTTTTTTGTTATAG+TGG | - | chr4.4:35961634-35961653 | MS.gene057722:intron | 30.0% |
| !!! | GGTTGTTTGTTTTACATGTT+TGG | - | chr4.4:35960244-35960263 | MS.gene057722:intron | 30.0% |
| !!! | GTTTTACATGTTTGGTTCTA+GGG | - | chr4.4:35960252-35960271 | MS.gene057722:intron | 30.0% |
| !!! | TGCTCTACTAGTTTTAACAT+CGG | - | chr4.4:35961924-35961943 | MS.gene057722:intron | 30.0% |
| !!! | TGTTTTACATGTTTGGTTCT+AGG | - | chr4.4:35960251-35960270 | MS.gene057722:intron | 30.0% |
| AAAAATTACAGGGGGAAAAC+CGG | + | chr4.4:35959771-35959790 | None:intergenic | 35.0% | |
| AAAATTTACAGGGGGAAAAC+CGG | - | chr4.4:35959957-35959976 | MS.gene057722:intron | 35.0% | |
| AAATAGCTTATCCTCAGACT+TGG | - | chr4.4:35961618-35961637 | MS.gene057722:intron | 35.0% | |
| AATTATTGTTCCCGTAAGGA+CGG | + | chr4.4:35962657-35962676 | None:intergenic | 35.0% | |
| ACAGAACTGGCAATATATAC+CGG | + | chr4.4:35960890-35960909 | None:intergenic | 35.0% | |
| CAAATTACGATGACATGACA+CGG | - | chr4.4:35962119-35962138 | MS.gene057722:intron | 35.0% | |
| CAAGAAGAATCTACTAGGAA+AGG | - | chr4.4:35962695-35962714 | MS.gene057722:intron | 35.0% | |
| CCGAACCATTTATAACGATA+AGG | + | chr4.4:35962942-35962961 | None:intergenic | 35.0% | |
| CCGGAAATAACCTATATTAC+AGG | - | chr4.4:35959976-35959995 | MS.gene057722:intron | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | - | chr4.4:35959749-35959768 | MS.gene057722:intron | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | + | chr4.4:35959751-35959770 | None:intergenic | 35.0% | |
| CTTGGGAATCTGTTCATTAA+TGG | - | chr4.4:35961250-35961269 | MS.gene057722:intron | 35.0% | |
| GATCTTTACCCCTGTAATAT+AGG | - | chr4.4:35959739-35959758 | MS.gene057722:intron | 35.0% | |
| GCAAAATTATTGTTCCCGTA+AGG | + | chr4.4:35962661-35962680 | None:intergenic | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | + | chr4.4:35959750-35959769 | None:intergenic | 35.0% | |
| TACATAGTGTTGTCGAATAG+CGG | + | chr4.4:35961404-35961423 | None:intergenic | 35.0% | |
| TACCTTAAACATTATTGCGC+TGG | + | chr4.4:35962459-35962478 | None:intergenic | 35.0% | |
| TATGTTGTAGATCTGATCCA+AGG | + | chr4.4:35959284-35959303 | None:intergenic | 35.0% | |
| TGGTTATTATGCAGATAGGA+GGG | + | chr4.4:35962046-35962065 | None:intergenic | 35.0% | |
| TGTCCAAGAAATATGGGAAT+TGG | - | chr4.4:35961030-35961049 | MS.gene057722:CDS | 35.0% | |
| TTAAGACCGCAAACAGATTA+AGG | + | chr4.4:35959608-35959627 | None:intergenic | 35.0% | |
| TTGGTTATTATGCAGATAGG+AGG | + | chr4.4:35962047-35962066 | None:intergenic | 35.0% | |
| ! | ACAACCCTTATTTCCAATGA+AGG | + | chr4.4:35960230-35960249 | None:intergenic | 35.0% |
| ! | ACGGGAACAATAATTTTGCA+TGG | - | chr4.4:35962662-35962681 | MS.gene057722:intron | 35.0% |
| ! | AGATAATGGTCTGTTAGGAT+TGG | + | chr4.4:35959379-35959398 | None:intergenic | 35.0% |
| ! | AGCGCAATAATGTTTAAGGT+AGG | - | chr4.4:35962458-35962477 | MS.gene057722:intron | 35.0% |
| ! | ATAATGTTTAAGGTAGGCGT+AGG | - | chr4.4:35962464-35962483 | MS.gene057722:intron | 35.0% |
| ! | ATCGTGGATTGCAGAAATAT+CGG | - | chr4.4:35961340-35961359 | MS.gene057722:CDS | 35.0% |
| ! | CGGGAACAATAATTTTGCAT+GGG | - | chr4.4:35962663-35962682 | MS.gene057722:intron | 35.0% |
| ! | GAAAAATATGCTGGTCTACT+TGG | - | chr4.4:35961232-35961251 | MS.gene057722:intron | 35.0% |
| ! | GTTTGTTCAAGTGGATTCAT+TGG | - | chr4.4:35959020-35959039 | MS.gene057722:CDS | 35.0% |
| ! | TAACAATGATCACGCGTTTT+GGG | - | chr4.4:35959258-35959277 | MS.gene057722:CDS | 35.0% |
| ! | TTAACAATGATCACGCGTTT+TGG | - | chr4.4:35959257-35959276 | MS.gene057722:CDS | 35.0% |
| ! | TTAACGCATTGACAAACATG+TGG | + | chr4.4:35962788-35962807 | None:intergenic | 35.0% |
| !! | GGTTTTTGTTTGGCCTATTA+GGG | - | chr4.4:35959887-35959906 | MS.gene057722:intron | 35.0% |
| !! | GTTTTTGTTTGGCCTACTAA+GGG | + | chr4.4:35959839-35959858 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | - | chr4.4:35959888-35959907 | MS.gene057722:intron | 35.0% |
| !! | TGCAGAAATATCGGTTTGTT+CGG | - | chr4.4:35961349-35961368 | MS.gene057722:CDS | 35.0% |
| !! | TTTTTGTTTGGCCTACTAAG+GGG | + | chr4.4:35959838-35959857 | None:intergenic | 35.0% |
| !! | TTTTTGTTTGGCCTATTAGG+GGG | - | chr4.4:35959889-35959908 | MS.gene057722:intron | 35.0% |
| !!! | GTTTTGATTTACCCCTTAGT+AGG | - | chr4.4:35959824-35959843 | MS.gene057722:intron | 35.0% |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | + | chr4.4:35959903-35959922 | None:intergenic | 35.0% |
| AAGGAAAGGCTTCAGAAGAT+GGG | - | chr4.4:35960929-35960948 | MS.gene057722:CDS | 40.0% | |
| ACAGTGCCTTAATCTGTTTG+CGG | - | chr4.4:35959599-35959618 | MS.gene057722:intron | 40.0% | |
| ATCTGCCAACAGTGATTACT+GGG | - | chr4.4:35960706-35960725 | MS.gene057722:CDS | 40.0% | |
| ATGCTGTCAAATAGAGGCTT+TGG | + | chr4.4:35961476-35961495 | None:intergenic | 40.0% | |
| ATTCTGCACTCACCTTGTTA+AGG | + | chr4.4:35961691-35961710 | None:intergenic | 40.0% | |
| CAAAACTACTGAAACCGTTG+CGG | + | chr4.4:35961177-35961196 | None:intergenic | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | + | chr4.4:35959752-35959771 | None:intergenic | 40.0% | |
| CCTTTCCTTCAACAAGAAGT+GGG | + | chr4.4:35960918-35960937 | None:intergenic | 40.0% | |
| CGTGGCTTATATTTATGCTC+CGG | - | chr4.4:35960743-35960762 | MS.gene057722:CDS | 40.0% | |
| CGTGTCATGTCATCGTAATT+TGG | + | chr4.4:35962121-35962140 | None:intergenic | 40.0% | |
| CTAACAGACCATTATCTGTG+AGG | - | chr4.4:35959382-35959401 | MS.gene057722:intron | 40.0% | |
| CTTATCTACTAGAGCCACTT+TGG | - | chr4.4:35960587-35960606 | MS.gene057722:intron | 40.0% | |
| GCAATAAAGCTTACCCTTGA+TGG | - | chr4.4:35961587-35961606 | MS.gene057722:intron | 40.0% | |
| GGAGTTTCGGAGAATTACAA+AGG | - | chr4.4:35958984-35959003 | MS.gene057722:CDS | 40.0% | |
| GGTTATTATGCAGATAGGAG+GGG | + | chr4.4:35962045-35962064 | None:intergenic | 40.0% | |
| GTCTTTACCCCCTGTAATAT+AGG | + | chr4.4:35959989-35960008 | None:intergenic | 40.0% | |
| GTTATGAGCATTAAGGCCAT+TGG | - | chr4.4:35961560-35961579 | MS.gene057722:intron | 40.0% | |
| TATCTGCCAACAGTGATTAC+TGG | - | chr4.4:35960705-35960724 | MS.gene057722:CDS | 40.0% | |
| TGAAGTGACAGTATCTTCTC+TGG | - | chr4.4:35962856-35962875 | MS.gene057722:CDS | 40.0% | |
| TGCCAGCGCAATAATGTTTA+AGG | - | chr4.4:35962454-35962473 | MS.gene057722:intron | 40.0% | |
| TGGCCAATTCCCATATTTCT+TGG | + | chr4.4:35961036-35961055 | None:intergenic | 40.0% | |
| ! | ACTTTTCGTCTGTTGAACAC+TGG | - | chr4.4:35962531-35962550 | MS.gene057722:intron | 40.0% |
| ! | ATACTTGCGGTTTGTTCAAG+TGG | - | chr4.4:35959011-35959030 | MS.gene057722:CDS | 40.0% |
| ! | CTCACAGATAATGGTCTGTT+AGG | + | chr4.4:35959384-35959403 | None:intergenic | 40.0% |
| ! | GAAGATACTGTCACTTCATG+AGG | + | chr4.4:35962854-35962873 | None:intergenic | 40.0% |
| ! | GAATTTGGAGTGTGTTCTTG+TGG | + | chr4.4:35961010-35961029 | None:intergenic | 40.0% |
| !! | AGCATAGCTTCTGAGATATG+TGG | - | chr4.4:35962623-35962642 | MS.gene057722:intron | 40.0% |
| !! | CGGTTTTTGTTTGGCCTATT+AGG | - | chr4.4:35959886-35959905 | MS.gene057722:intron | 40.0% |
| !! | CGTTTTTGTTTGGCCTACTA+AGG | + | chr4.4:35959840-35959859 | None:intergenic | 40.0% |
| !! | GTTTTAGTCTGAATGTGGGT+TGG | - | chr4.4:35960132-35960151 | MS.gene057722:intron | 40.0% |
| !! | TTACATGTTTGGTTCTAGGG+TGG | - | chr4.4:35960255-35960274 | MS.gene057722:intron | 40.0% |
| !! | TTTGCATTACAGGATTGGTC+TGG | - | chr4.4:35962587-35962606 | MS.gene057722:intron | 40.0% |
| !! | TTTTGTTTGGCCTATTAGGG+GGG | - | chr4.4:35959890-35959909 | MS.gene057722:intron | 40.0% |
| !!! | AGAGTAAGTTGATCCGCTTT+TGG | + | chr4.4:35960164-35960183 | None:intergenic | 40.0% |
| !!! | GAGTAAGTTGATCCGCTTTT+GGG | + | chr4.4:35960163-35960182 | None:intergenic | 40.0% |
| !!! | GTTTTGAAATTTGCAGGGGT+TGG | - | chr4.4:35960556-35960575 | MS.gene057722:intron | 40.0% |
| !!! | TGGACGCAAATTTTCAAGTC+TGG | - | chr4.4:35961771-35961790 | MS.gene057722:intron | 40.0% |
| AACAATTGATCCCACGATGC+AGG | + | chr4.4:35960972-35960991 | None:intergenic | 45.0% | |
| AATCACAGTCACAGCCTCAT+AGG | - | chr4.4:35961899-35961918 | MS.gene057722:intron | 45.0% | |
| ACAGTATCTTCTCTGGTGCA+GGG | - | chr4.4:35962863-35962882 | MS.gene057722:CDS | 45.0% | |
| AGCAATGCTCTTTCTCTCTC+AGG | - | chr4.4:35960637-35960656 | MS.gene057722:intron | 45.0% | |
| AGGAAAGGCTTCAGAAGATG+GGG | - | chr4.4:35960930-35960949 | MS.gene057722:CDS | 45.0% | |
| AGGAGTGGGTCAGTAATAAC+AGG | - | chr4.4:35962092-35962111 | MS.gene057722:intron | 45.0% | |
| ATCACAGTCACAGCCTCATA+GGG | - | chr4.4:35961900-35961919 | MS.gene057722:intron | 45.0% | |
| ATTATGCAGATAGGAGGGGA+AGG | + | chr4.4:35962041-35962060 | None:intergenic | 45.0% | |
| CATATCAGTGTTGTCGATCG+TGG | - | chr4.4:35961324-35961343 | MS.gene057722:intron | 45.0% | |
| CCAAACAGCCTCACAGATAA+TGG | + | chr4.4:35959393-35959412 | None:intergenic | 45.0% | |
| CCATTATCTGTGAGGCTGTT+TGG | - | chr4.4:35959390-35959409 | MS.gene057722:intron | 45.0% | |
| CCCACTTCTTGTTGAAGGAA+AGG | - | chr4.4:35960915-35960934 | MS.gene057722:CDS | 45.0% | |
| CTCTTTCTCTCTCAGGTAGA+AGG | - | chr4.4:35960644-35960663 | MS.gene057722:intron | 45.0% | |
| CTGTGTAACGACGCATATTG+TGG | + | chr4.4:35961660-35961679 | None:intergenic | 45.0% | |
| GAAGGAAAGGCTTCAGAAGA+TGG | - | chr4.4:35960928-35960947 | MS.gene057722:CDS | 45.0% | |
| GCCTTTCCTTCAACAAGAAG+TGG | + | chr4.4:35960919-35960938 | None:intergenic | 45.0% | |
| GGTTGCATCGAATGTATCCA+GGG | + | chr4.4:35962387-35962406 | None:intergenic | 45.0% | |
| GTTTCGGTTATAAGCTGCAC+CGG | + | chr4.4:35961725-35961744 | None:intergenic | 45.0% | |
| TATGATTTATGCCGCCGCAA+CGG | - | chr4.4:35961160-35961179 | MS.gene057722:CDS | 45.0% | |
| TCTGCCAACAGTGATTACTG+GGG | - | chr4.4:35960707-35960726 | MS.gene057722:CDS | 45.0% | |
| TCTGTTTGCGGTCTTAAGCA+TGG | - | chr4.4:35959611-35959630 | MS.gene057722:intron | 45.0% | |
| TGGATTCATCACCGTCCTTA+CGG | - | chr4.4:35962643-35962662 | MS.gene057722:intron | 45.0% | |
| TGGTTGCATCGAATGTATCC+AGG | + | chr4.4:35962388-35962407 | None:intergenic | 45.0% | |
| TTCAACTATGTTTCAGGCCC+TGG | - | chr4.4:35962367-35962386 | MS.gene057722:intron | 45.0% | |
| TTCATCCTCAACGCACTTTG+CGG | + | chr4.4:35962917-35962936 | None:intergenic | 45.0% | |
| TTGAAATTTGCAGGGGTTGG+TGG | - | chr4.4:35960559-35960578 | MS.gene057722:intron | 45.0% | |
| TTTGGCCCACTTCTTGTTGA+AGG | - | chr4.4:35960910-35960929 | MS.gene057722:CDS | 45.0% | |
| ! | AAATAGAGGCTTTGGCGTAG+CGG | + | chr4.4:35961468-35961487 | None:intergenic | 45.0% |
| ! | ACTAGTAGAGCATCCCTATG+AGG | + | chr4.4:35961916-35961935 | None:intergenic | 45.0% |
| ! | ATCTACTAGAGCCACTTTGG+TGG | - | chr4.4:35960590-35960609 | MS.gene057722:intron | 45.0% |
| ! | CGCAACGGTTTCAGTAGTTT+TGG | - | chr4.4:35961175-35961194 | MS.gene057722:CDS | 45.0% |
| ! | TCTACTAGAGCCACTTTGGT+GGG | - | chr4.4:35960591-35960610 | MS.gene057722:intron | 45.0% |
| ! | TGCGGTCTTAAGCATGGTTT+TGG | - | chr4.4:35959617-35959636 | MS.gene057722:intron | 45.0% |
| !! | ATTACAGGATTGGTCTGGTC+AGG | - | chr4.4:35962592-35962611 | MS.gene057722:intron | 45.0% |
| !! | ATTAAAAAAAAAAAATTTAC+AGG | - | chr4.4:35959946-35959965 | MS.gene057722:intron | 5.0% |
| !! | TTAAAAAAAAAAAATTTACA+GGG | - | chr4.4:35959947-35959966 | MS.gene057722:intron | 5.0% |
| !!! | ATTCATTTTTAATAAATTTT+AGG | - | chr4.4:35959709-35959728 | MS.gene057722:intron | 5.0% |
| !!! | TTCATTTTTAATAAATTTTA+GGG | - | chr4.4:35959710-35959729 | MS.gene057722:intron | 5.0% |
| AACTACTGAAACCGTTGCGG+CGG | + | chr4.4:35961174-35961193 | None:intergenic | 50.0% | |
| AATTGGCCACTCAACCAGGT+TGG | - | chr4.4:35961047-35961066 | MS.gene057722:intron | 50.0% | |
| AGAGGAGTGACTAGAACTGC+CGG | + | chr4.4:35960765-35960784 | None:intergenic | 50.0% | |
| AGATTCCGCAAAGTGCGTTG+AGG | - | chr4.4:35962909-35962928 | MS.gene057722:CDS | 50.0% | |
| AGGATGTTTGTCCTGCATCG+TGG | - | chr4.4:35960958-35960977 | MS.gene057722:CDS | 50.0% | |
| ATGGGAGATACATGCCAACC+TGG | + | chr4.4:35961064-35961083 | None:intergenic | 50.0% | |
| GAAGTGGGCCAAAACAGAAC+TGG | + | chr4.4:35960903-35960922 | None:intergenic | 50.0% | |
| GACAGTATCTTCTCTGGTGC+AGG | - | chr4.4:35962862-35962881 | MS.gene057722:CDS | 50.0% | |
| GAGTGTGTTCTTGTGGTGCA+TGG | + | chr4.4:35961003-35961022 | None:intergenic | 50.0% | |
| GCTTCCCCAGTAATCACTGT+TGG | + | chr4.4:35960714-35960733 | None:intergenic | 50.0% | |
| GGAAAGGCTTCAGAAGATGG+GGG | - | chr4.4:35960931-35960950 | MS.gene057722:CDS | 50.0% | |
| GGATGTTTGTCCTGCATCGT+GGG | - | chr4.4:35960959-35960978 | MS.gene057722:CDS | 50.0% | |
| GGATTCATCACCGTCCTTAC+GGG | - | chr4.4:35962644-35962663 | MS.gene057722:intron | 50.0% | |
| GGGTTGGAAGTTCCCAAAAG+CGG | - | chr4.4:35960148-35960167 | MS.gene057722:intron | 50.0% | |
| TACATGCCAACCTGGTTGAG+TGG | + | chr4.4:35961056-35961075 | None:intergenic | 50.0% | |
| TCTTACACTAGTGTGGTCCC+AGG | - | chr4.4:35961826-35961845 | MS.gene057722:intron | 50.0% | |
| TGGGGAAGCTGCAAATTTCG+TGG | - | chr4.4:35960725-35960744 | MS.gene057722:CDS | 50.0% | |
| ! | GCAGTTCTAGTCACTCCTCT+TGG | - | chr4.4:35960765-35960784 | MS.gene057722:CDS | 50.0% |
| !! | CATGTTTGGTTCTAGGGTGG+CGG | - | chr4.4:35960258-35960277 | MS.gene057722:intron | 50.0% |
| !! | CTTAAACGTGCTGCTTCACG+CGG | - | chr4.4:35959071-35959090 | MS.gene057722:intron | 50.0% |
| !! | CTTCAGAAGATGGGGGTGTT+AGG | - | chr4.4:35960938-35960957 | MS.gene057722:CDS | 50.0% |
| ACAGAAGAGGCTTTGCCTCC+TGG | + | chr4.4:35961847-35961866 | None:intergenic | 55.0% | |
| ACCATGCCAACCCACCAAAG+TGG | + | chr4.4:35960604-35960623 | None:intergenic | 55.0% | |
| ATGATGCTGAGTGCGCCAAG+AGG | + | chr4.4:35960783-35960802 | None:intergenic | 55.0% | |
| CAGAAGAGGCTTTGCCTCCT+GGG | + | chr4.4:35961846-35961865 | None:intergenic | 55.0% | |
| GCGCACTCAGCATCATTGTC+AGG | - | chr4.4:35960787-35960806 | MS.gene057722:intron | 55.0% | |
| TACACTAGTGTGGTCCCAGG+AGG | - | chr4.4:35961829-35961848 | MS.gene057722:intron | 55.0% | |
| TGGGAATTGGCCACTCAACC+AGG | - | chr4.4:35961043-35961062 | MS.gene057722:intron | 55.0% | |
| ! | CTAGAGCCACTTTGGTGGGT+TGG | - | chr4.4:35960595-35960614 | MS.gene057722:intron | 55.0% |
| !! | TGATCACGCGTTTTGGGCCT+TGG | - | chr4.4:35959264-35959283 | MS.gene057722:CDS | 55.0% |
| ! | CTGGTGCAGGGAGCATGTCA+TGG | - | chr4.4:35962875-35962894 | MS.gene057722:CDS | 60.0% |
| !! | GCCACTTTGGTGGGTTGGCA+TGG | - | chr4.4:35960600-35960619 | MS.gene057722:intron | 60.0% |
| GCTTCACGCGGTACTCGTGC+AGG | - | chr4.4:35959083-35959102 | MS.gene057722:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 35958981 | 35962978 | 35958981 | ID=MS.gene057722 |
| chr4.4 | mRNA | 35958981 | 35962978 | 35958981 | ID=MS.gene057722.t1;Parent=MS.gene057722 |
| chr4.4 | exon | 35962855 | 35962978 | 35962855 | ID=MS.gene057722.t1.exon1;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35962855 | 35962978 | 35962855 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35961331 | 35961387 | 35961331 | ID=MS.gene057722.t1.exon2;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35961331 | 35961387 | 35961331 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35961151 | 35961241 | 35961151 | ID=MS.gene057722.t1.exon3;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35961151 | 35961241 | 35961151 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35960895 | 35961055 | 35960895 | ID=MS.gene057722.t1.exon4;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35960895 | 35961055 | 35960895 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35960676 | 35960803 | 35960676 | ID=MS.gene057722.t1.exon5;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35960676 | 35960803 | 35960676 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35960262 | 35960399 | 35960262 | ID=MS.gene057722.t1.exon6;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35960262 | 35960399 | 35960262 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35959484 | 35959576 | 35959484 | ID=MS.gene057722.t1.exon7;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35959484 | 35959576 | 35959484 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35959243 | 35959360 | 35959243 | ID=MS.gene057722.t1.exon8;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35959243 | 35959360 | 35959243 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| chr4.4 | exon | 35958981 | 35959075 | 35958981 | ID=MS.gene057722.t1.exon9;Parent=MS.gene057722.t1 |
| chr4.4 | CDS | 35958981 | 35959075 | 35958981 | ID=cds.MS.gene057722.t1;Parent=MS.gene057722.t1 |
| Gene Sequence |
| Protein sequence |
