Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007761.t1 | XP_013455909.1 | 96.1 | 458 | 18 | 0 | 1 | 458 | 1 | 458 | 1.20E-257 | 898.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007761.t1 | Q67Y83 | 63.1 | 431 | 157 | 1 | 28 | 456 | 29 | 459 | 1.7e-161 | 570.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007761.t1 | A0A072UVR7 | 96.1 | 458 | 18 | 0 | 1 | 458 | 1 | 458 | 8.3e-258 | 898.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020426 | MS.gene007761 | PPI |
| MS.gene007761 | MS.gene23880 | PPI |
| MS.gene007761 | MS.gene004369 | PPI |
| MS.gene007761 | MS.gene037763 | PPI |
| MS.gene007761 | MS.gene002689 | PPI |
| MS.gene007761 | MS.gene97299 | PPI |
| MS.gene022111 | MS.gene007761 | PPI |
| MS.gene007761 | MS.gene80760 | PPI |
| MS.gene007761 | MS.gene05803 | PPI |
| MS.gene007761 | MS.gene43171 | PPI |
| MS.gene007761 | MS.gene05805 | PPI |
| MS.gene007761 | MS.gene002690 | PPI |
| MS.gene007761 | MS.gene037764 | PPI |
| MS.gene007761 | MS.gene43589 | PPI |
| MS.gene43592 | MS.gene007761 | PPI |
| MS.gene007761 | MS.gene43588 | PPI |
| MS.gene007761 | MS.gene05806 | PPI |
| MS.gene007761 | MS.gene43593 | PPI |
| MS.gene007761 | MS.gene002688 | PPI |
| MS.gene007761 | MS.gene004371 | PPI |
| MS.gene007761 | MS.gene05804 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007761.t1 | MTR_4g056520 | 96.070 | 458 | 18 | 0 | 1 | 458 | 1 | 458 | 0.0 | 895 |
| MS.gene007761.t1 | MTR_2g084530 | 67.974 | 459 | 143 | 3 | 1 | 458 | 1 | 456 | 0.0 | 605 |
| MS.gene007761.t1 | MTR_4g084710 | 28.049 | 410 | 238 | 12 | 55 | 449 | 63 | 430 | 4.62e-36 | 139 |
| MS.gene007761.t1 | MTR_5g097180 | 27.430 | 463 | 270 | 15 | 5 | 449 | 14 | 428 | 1.77e-35 | 137 |
| MS.gene007761.t1 | MTR_4g057600 | 25.882 | 425 | 259 | 11 | 44 | 454 | 108 | 490 | 4.44e-35 | 136 |
| MS.gene007761.t1 | MTR_2g095750 | 27.294 | 425 | 254 | 12 | 44 | 454 | 113 | 496 | 1.48e-33 | 132 |
| MS.gene007761.t1 | MTR_4g057570 | 26.549 | 452 | 274 | 13 | 17 | 451 | 75 | 485 | 2.99e-33 | 131 |
| MS.gene007761.t1 | MTR_1g050545 | 27.570 | 428 | 251 | 12 | 38 | 449 | 90 | 474 | 3.29e-33 | 131 |
| MS.gene007761.t1 | MTR_4g057595 | 25.629 | 437 | 271 | 11 | 29 | 451 | 93 | 489 | 1.32e-32 | 129 |
| MS.gene007761.t1 | MTR_1g094155 | 26.531 | 441 | 256 | 14 | 30 | 449 | 87 | 480 | 1.45e-31 | 127 |
| MS.gene007761.t1 | MTR_4g057585 | 25.000 | 420 | 263 | 9 | 44 | 451 | 109 | 488 | 2.04e-31 | 126 |
| MS.gene007761.t1 | MTR_2g095730 | 25.995 | 427 | 260 | 12 | 44 | 454 | 107 | 493 | 5.50e-28 | 116 |
| MS.gene007761.t1 | MTR_1g020090 | 26.351 | 444 | 260 | 17 | 27 | 453 | 98 | 491 | 4.44e-27 | 114 |
| MS.gene007761.t1 | MTR_3g079590 | 27.842 | 431 | 257 | 19 | 36 | 453 | 95 | 484 | 8.64e-27 | 113 |
| MS.gene007761.t1 | MTR_3g079620 | 26.087 | 437 | 265 | 14 | 36 | 453 | 95 | 492 | 4.27e-26 | 111 |
| MS.gene007761.t1 | MTR_1g021020 | 25.676 | 444 | 247 | 16 | 36 | 453 | 95 | 481 | 6.04e-26 | 110 |
| MS.gene007761.t1 | MTR_3g079560 | 27.064 | 436 | 254 | 18 | 36 | 453 | 95 | 484 | 1.09e-25 | 109 |
| MS.gene007761.t1 | MTR_2g012850 | 25.277 | 451 | 273 | 18 | 36 | 458 | 52 | 466 | 2.20e-25 | 108 |
| MS.gene007761.t1 | MTR_8g099930 | 25.455 | 440 | 277 | 15 | 36 | 455 | 50 | 458 | 5.12e-25 | 107 |
| MS.gene007761.t1 | MTR_3g498755 | 25.670 | 448 | 265 | 14 | 36 | 454 | 32 | 440 | 6.05e-25 | 107 |
| MS.gene007761.t1 | MTR_1g021010 | 24.424 | 434 | 266 | 15 | 36 | 453 | 93 | 480 | 1.38e-24 | 106 |
| MS.gene007761.t1 | MTR_4g089155 | 25.618 | 445 | 271 | 17 | 36 | 454 | 70 | 480 | 2.35e-24 | 105 |
| MS.gene007761.t1 | MTR_3g079570 | 26.174 | 447 | 243 | 18 | 36 | 453 | 96 | 484 | 1.08e-23 | 103 |
| MS.gene007761.t1 | MTR_2g012860 | 27.193 | 456 | 282 | 17 | 19 | 453 | 41 | 467 | 1.86e-23 | 103 |
| MS.gene007761.t1 | MTR_3g079600 | 23.624 | 436 | 272 | 14 | 36 | 453 | 93 | 485 | 2.12e-23 | 103 |
| MS.gene007761.t1 | MTR_7g080180 | 21.272 | 503 | 314 | 17 | 1 | 442 | 1 | 482 | 2.59e-22 | 99.8 |
| MS.gene007761.t1 | MTR_2g095710 | 24.940 | 417 | 268 | 14 | 43 | 454 | 103 | 479 | 5.69e-22 | 98.6 |
| MS.gene007761.t1 | MTR_1g040370 | 24.130 | 431 | 248 | 13 | 36 | 454 | 47 | 410 | 9.57e-22 | 97.4 |
| MS.gene007761.t1 | MTR_8g011350 | 24.033 | 491 | 298 | 20 | 9 | 448 | 19 | 485 | 1.59e-21 | 97.4 |
| MS.gene007761.t1 | MTR_4g075150 | 25.227 | 440 | 274 | 16 | 36 | 453 | 51 | 457 | 3.17e-21 | 96.3 |
| MS.gene007761.t1 | MTR_3g434850 | 23.898 | 431 | 288 | 13 | 36 | 454 | 47 | 449 | 3.27e-21 | 96.3 |
| MS.gene007761.t1 | MTR_3g090130 | 24.821 | 419 | 269 | 14 | 55 | 454 | 60 | 451 | 3.47e-21 | 96.3 |
| MS.gene007761.t1 | MTR_4g075150 | 25.000 | 440 | 273 | 16 | 36 | 453 | 51 | 455 | 4.97e-21 | 95.9 |
| MS.gene007761.t1 | MTR_4g122950 | 25.113 | 442 | 281 | 18 | 36 | 453 | 56 | 471 | 8.59e-20 | 92.0 |
| MS.gene007761.t1 | MTR_7g021130 | 26.018 | 442 | 268 | 17 | 36 | 454 | 47 | 452 | 1.20e-19 | 91.7 |
| MS.gene007761.t1 | MTR_3g034290 | 23.767 | 446 | 270 | 16 | 32 | 454 | 87 | 485 | 2.08e-19 | 90.9 |
| MS.gene007761.t1 | MTR_3g079630 | 25.231 | 432 | 275 | 16 | 36 | 453 | 95 | 492 | 2.11e-19 | 90.9 |
| MS.gene007761.t1 | MTR_2g449850 | 26.066 | 422 | 266 | 16 | 55 | 458 | 70 | 463 | 2.49e-19 | 90.5 |
| MS.gene007761.t1 | MTR_7g051430 | 22.658 | 459 | 267 | 14 | 55 | 454 | 62 | 491 | 2.54e-19 | 90.9 |
| MS.gene007761.t1 | MTR_3g090150 | 24.434 | 442 | 272 | 16 | 38 | 454 | 54 | 458 | 5.74e-19 | 89.7 |
| MS.gene007761.t1 | MTR_7g080180 | 20.843 | 451 | 289 | 14 | 1 | 394 | 1 | 440 | 1.19e-18 | 88.6 |
| MS.gene007761.t1 | MTR_7g013790 | 23.973 | 438 | 282 | 14 | 36 | 453 | 52 | 458 | 5.16e-18 | 86.7 |
| MS.gene007761.t1 | MTR_8g011350 | 22.299 | 435 | 273 | 15 | 9 | 394 | 19 | 437 | 6.37e-18 | 86.3 |
| MS.gene007761.t1 | MTR_3g114620 | 47.170 | 106 | 19 | 2 | 122 | 227 | 19 | 87 | 4.35e-17 | 76.6 |
| MS.gene007761.t1 | MTR_2g062990 | 22.506 | 431 | 292 | 17 | 36 | 454 | 57 | 457 | 1.03e-16 | 82.8 |
| MS.gene007761.t1 | MTR_0003s0560 | 22.042 | 431 | 284 | 15 | 36 | 453 | 90 | 481 | 3.77e-16 | 80.9 |
| MS.gene007761.t1 | MTR_0003s0560 | 25.000 | 228 | 146 | 7 | 32 | 237 | 86 | 310 | 3.85e-16 | 80.1 |
| MS.gene007761.t1 | MTR_2g063000 | 22.146 | 438 | 285 | 17 | 36 | 453 | 56 | 457 | 6.55e-16 | 80.1 |
| MS.gene007761.t1 | MTR_5g072570 | 30.857 | 175 | 105 | 5 | 32 | 196 | 42 | 210 | 7.44e-16 | 80.1 |
| MS.gene007761.t1 | MTR_2g062980 | 29.240 | 171 | 109 | 6 | 36 | 197 | 57 | 224 | 9.24e-16 | 79.7 |
| MS.gene007761.t1 | MTR_2g081620 | 21.028 | 428 | 300 | 13 | 36 | 453 | 58 | 457 | 2.12e-15 | 78.6 |
| MS.gene007761.t1 | MTR_4g122960 | 23.583 | 441 | 287 | 17 | 36 | 453 | 56 | 469 | 3.19e-15 | 78.2 |
| MS.gene007761.t1 | MTR_1g095560 | 30.968 | 155 | 97 | 4 | 27 | 173 | 41 | 193 | 3.30e-15 | 78.2 |
| MS.gene007761.t1 | MTR_1g095560 | 30.968 | 155 | 97 | 4 | 27 | 173 | 41 | 193 | 3.47e-15 | 77.8 |
| MS.gene007761.t1 | MTR_7g051430 | 32.051 | 156 | 90 | 5 | 55 | 196 | 62 | 215 | 3.09e-14 | 74.7 |
| MS.gene007761.t1 | MTR_1g095540 | 21.889 | 434 | 294 | 14 | 36 | 455 | 50 | 452 | 4.25e-14 | 74.3 |
| MS.gene007761.t1 | MTR_3g034290 | 27.778 | 180 | 117 | 5 | 32 | 202 | 87 | 262 | 4.55e-14 | 74.3 |
| MS.gene007761.t1 | MTR_2g018600 | 23.340 | 467 | 268 | 19 | 34 | 457 | 49 | 468 | 3.98e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007761.t1 | AT2G27920 | 64.733 | 431 | 150 | 1 | 28 | 456 | 29 | 459 | 0.0 | 578 |
| MS.gene007761.t1 | AT2G27920 | 61.719 | 384 | 145 | 1 | 75 | 456 | 4 | 387 | 5.41e-169 | 481 |
| MS.gene007761.t1 | AT2G27920 | 59.130 | 345 | 139 | 1 | 114 | 456 | 48 | 392 | 1.27e-142 | 414 |
| MS.gene007761.t1 | AT3G45010 | 26.531 | 441 | 269 | 13 | 29 | 454 | 97 | 497 | 4.14e-37 | 142 |
| MS.gene007761.t1 | AT5G22980 | 28.000 | 425 | 249 | 11 | 44 | 454 | 111 | 492 | 1.17e-36 | 141 |
| MS.gene007761.t1 | AT1G15000 | 27.442 | 430 | 246 | 12 | 36 | 449 | 38 | 417 | 3.89e-35 | 136 |
| MS.gene007761.t1 | AT3G10410 | 26.879 | 439 | 256 | 15 | 30 | 449 | 96 | 488 | 1.38e-29 | 121 |
| MS.gene007761.t1 | AT3G52010 | 27.169 | 438 | 262 | 18 | 36 | 455 | 82 | 480 | 1.52e-27 | 115 |
| MS.gene007761.t1 | AT3G52000 | 26.304 | 441 | 258 | 18 | 36 | 455 | 81 | 475 | 1.37e-24 | 106 |
| MS.gene007761.t1 | AT4G15100 | 26.879 | 439 | 278 | 16 | 36 | 454 | 61 | 476 | 2.37e-24 | 105 |
| MS.gene007761.t1 | AT4G12910 | 22.107 | 484 | 305 | 16 | 19 | 454 | 34 | 493 | 2.96e-22 | 99.8 |
| MS.gene007761.t1 | AT1G11080 | 25.172 | 437 | 288 | 15 | 36 | 453 | 67 | 483 | 1.13e-21 | 97.8 |
| MS.gene007761.t1 | AT1G11080 | 25.172 | 437 | 288 | 15 | 36 | 453 | 67 | 483 | 1.65e-21 | 97.4 |
| MS.gene007761.t1 | AT2G35780 | 24.658 | 438 | 271 | 15 | 36 | 453 | 47 | 445 | 3.14e-21 | 96.3 |
| MS.gene007761.t1 | AT3G63470 | 24.356 | 427 | 281 | 15 | 36 | 453 | 98 | 491 | 7.90e-21 | 95.5 |
| MS.gene007761.t1 | AT3G07990 | 25.112 | 446 | 281 | 17 | 28 | 455 | 43 | 453 | 1.66e-20 | 94.4 |
| MS.gene007761.t1 | AT2G05850 | 24.550 | 444 | 267 | 17 | 36 | 455 | 81 | 480 | 3.79e-20 | 93.2 |
| MS.gene007761.t1 | AT3G25420 | 23.125 | 480 | 305 | 16 | 19 | 453 | 29 | 489 | 4.61e-20 | 93.2 |
| MS.gene007761.t1 | AT5G23210 | 26.545 | 437 | 287 | 14 | 36 | 453 | 68 | 489 | 4.89e-20 | 93.2 |
| MS.gene007761.t1 | AT2G33530 | 23.843 | 432 | 290 | 14 | 36 | 453 | 50 | 456 | 1.01e-19 | 92.0 |
| MS.gene007761.t1 | AT5G42240 | 23.303 | 442 | 283 | 13 | 36 | 453 | 49 | 458 | 2.29e-19 | 90.9 |
| MS.gene007761.t1 | AT4G30810 | 24.880 | 418 | 276 | 16 | 46 | 453 | 67 | 456 | 2.88e-19 | 90.5 |
| MS.gene007761.t1 | AT1G28110 | 25.688 | 436 | 275 | 16 | 36 | 453 | 48 | 452 | 1.12e-18 | 88.6 |
| MS.gene007761.t1 | AT1G28110 | 25.688 | 436 | 275 | 16 | 36 | 453 | 48 | 452 | 1.12e-18 | 88.6 |
| MS.gene007761.t1 | AT1G43780 | 23.820 | 445 | 278 | 16 | 36 | 453 | 54 | 464 | 1.43e-18 | 88.6 |
| MS.gene007761.t1 | AT3G17180 | 23.462 | 439 | 292 | 17 | 36 | 454 | 56 | 470 | 2.45e-18 | 87.8 |
| MS.gene007761.t1 | AT3G52020 | 25.566 | 442 | 264 | 20 | 36 | 455 | 96 | 494 | 3.87e-18 | 87.4 |
| MS.gene007761.t1 | AT4G12910 | 21.615 | 421 | 270 | 13 | 19 | 394 | 34 | 439 | 9.62e-18 | 85.9 |
| MS.gene007761.t1 | AT1G61130 | 23.301 | 412 | 263 | 12 | 65 | 454 | 75 | 455 | 9.79e-18 | 85.9 |
| MS.gene007761.t1 | AT5G42230 | 33.333 | 150 | 92 | 3 | 55 | 196 | 60 | 209 | 3.87e-17 | 84.0 |
| MS.gene007761.t1 | AT5G42230 | 33.333 | 150 | 92 | 3 | 55 | 196 | 60 | 209 | 3.87e-17 | 84.0 |
| MS.gene007761.t1 | AT2G12480 | 22.844 | 429 | 271 | 14 | 36 | 454 | 48 | 426 | 5.76e-17 | 83.2 |
| MS.gene007761.t1 | AT2G12480 | 23.077 | 429 | 272 | 14 | 36 | 454 | 48 | 428 | 7.22e-17 | 83.2 |
| MS.gene007761.t1 | AT2G12480 | 22.430 | 428 | 275 | 13 | 36 | 454 | 48 | 427 | 7.94e-17 | 82.8 |
| MS.gene007761.t1 | AT5G23210 | 29.258 | 229 | 144 | 8 | 36 | 252 | 68 | 290 | 9.67e-17 | 82.8 |
| MS.gene007761.t1 | AT2G12480 | 23.844 | 411 | 281 | 13 | 55 | 454 | 63 | 452 | 2.18e-16 | 81.6 |
| MS.gene007761.t1 | AT3G17180 | 25.746 | 268 | 165 | 11 | 36 | 285 | 56 | 307 | 5.26e-16 | 80.5 |
| MS.gene007761.t1 | AT2G24010 | 34.694 | 147 | 82 | 5 | 36 | 173 | 47 | 188 | 5.71e-16 | 80.5 |
| MS.gene007761.t1 | AT5G08260 | 30.000 | 180 | 103 | 6 | 36 | 200 | 56 | 227 | 6.98e-16 | 80.1 |
| MS.gene007761.t1 | AT2G24000 | 34.014 | 147 | 84 | 5 | 36 | 173 | 47 | 189 | 5.11e-15 | 77.4 |
| MS.gene007761.t1 | AT3G02110 | 31.655 | 139 | 89 | 2 | 65 | 197 | 81 | 219 | 9.76e-15 | 76.6 |
| MS.gene007761.t1 | AT2G35770 | 23.714 | 447 | 279 | 17 | 28 | 453 | 47 | 452 | 1.67e-14 | 75.9 |
| MS.gene007761.t1 | AT4G30610 | 23.556 | 450 | 278 | 17 | 32 | 453 | 45 | 456 | 1.50e-13 | 72.8 |
| MS.gene007761.t1 | AT1G73290 | 30.345 | 145 | 84 | 4 | 34 | 166 | 47 | 186 | 2.68e-13 | 70.9 |
| MS.gene007761.t1 | AT1G73290 | 30.345 | 145 | 84 | 4 | 34 | 166 | 47 | 186 | 8.66e-13 | 70.1 |
| MS.gene007761.t1 | AT1G73280 | 22.293 | 471 | 261 | 17 | 10 | 437 | 13 | 421 | 9.01e-13 | 70.5 |
| MS.gene007761.t1 | AT1G73300 | 31.034 | 145 | 83 | 4 | 34 | 166 | 48 | 187 | 9.42e-13 | 70.5 |
| MS.gene007761.t1 | AT1G73300 | 31.034 | 145 | 83 | 4 | 34 | 166 | 48 | 187 | 9.42e-13 | 70.5 |
| MS.gene007761.t1 | AT1G73290 | 30.345 | 145 | 84 | 4 | 34 | 166 | 47 | 186 | 1.10e-12 | 70.1 |
| MS.gene007761.t1 | AT1G73280 | 24.375 | 320 | 195 | 11 | 10 | 290 | 13 | 324 | 1.30e-12 | 69.7 |
| MS.gene007761.t1 | AT5G36180 | 29.814 | 161 | 95 | 5 | 19 | 166 | 32 | 187 | 2.60e-12 | 68.9 |
| MS.gene007761.t1 | AT5G22960 | 27.568 | 185 | 104 | 6 | 5 | 184 | 8 | 167 | 2.61e-12 | 65.9 |
| MS.gene007761.t1 | AT2G24010 | 30.864 | 162 | 83 | 6 | 36 | 173 | 18 | 174 | 4.37e-12 | 67.8 |
| MS.gene007761.t1 | AT1G73270 | 31.034 | 145 | 83 | 4 | 34 | 166 | 48 | 187 | 9.67e-12 | 67.4 |
| MS.gene007761.t1 | AT1G73270 | 31.034 | 145 | 83 | 4 | 34 | 166 | 48 | 187 | 9.72e-12 | 67.0 |
| MS.gene007761.t1 | AT2G24010 | 30.864 | 162 | 83 | 6 | 36 | 173 | 18 | 174 | 9.74e-12 | 67.4 |
| MS.gene007761.t1 | AT2G24010 | 30.864 | 162 | 83 | 6 | 36 | 173 | 47 | 203 | 9.92e-12 | 67.4 |
| MS.gene007761.t1 | AT3G56540 | 28.025 | 157 | 102 | 5 | 19 | 168 | 79 | 231 | 1.13e-11 | 65.5 |
| MS.gene007761.t1 | AT5G09640 | 22.056 | 467 | 294 | 18 | 9 | 435 | 7 | 443 | 2.43e-11 | 65.9 |
| MS.gene007761.t1 | AT1G73310 | 29.655 | 145 | 85 | 4 | 34 | 166 | 48 | 187 | 4.80e-11 | 65.1 |
| MS.gene007761.t1 | AT1G73310 | 29.655 | 145 | 85 | 4 | 34 | 166 | 48 | 187 | 5.44e-11 | 64.7 |
| MS.gene007761.t1 | AT3G10450 | 28.276 | 145 | 87 | 4 | 34 | 166 | 44 | 183 | 9.68e-11 | 63.9 |
Find 102 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACAATTCTATTGGATTCT+TGG | 0.200204 | 4.4:+46409332 | MS.gene007761:CDS |
| CCCTGCAACCAGAGAATTAT+TGG | 0.209686 | 4.4:-46405911 | None:intergenic |
| CTTCTTACCTCATCAATTCT+TGG | 0.221137 | 4.4:-46408446 | None:intergenic |
| AAACTTGGCGCTTTACTAAA+TGG | 0.231890 | 4.4:+46408223 | MS.gene007761:CDS |
| AATTCAACATGGTTGTTAAA+AGG | 0.269721 | 4.4:+46406234 | MS.gene007761:CDS |
| GGCAAATTTGCTGTCACTCT+TGG | 0.293076 | 4.4:+46406825 | MS.gene007761:CDS |
| GCCAATAATTCTCTGGTTGC+AGG | 0.294647 | 4.4:+46405910 | MS.gene007761:CDS |
| CAAGAATCCAATAGAATTGT+AGG | 0.295802 | 4.4:-46409331 | None:intergenic |
| TTGCAGAAGCACACATGTTT+TGG | 0.324024 | 4.4:+46405840 | MS.gene007761:intron |
| TAGACTTACGTGACATTCTC+AGG | 0.332673 | 4.4:-46408274 | None:intergenic |
| AAGATAAGTGAAAACTTCAT+TGG | 0.346770 | 4.4:-46408405 | None:intergenic |
| TTACTTACCACAAAATCTTC+TGG | 0.356577 | 4.4:-46407323 | None:intergenic |
| CCCATTCTTCTGATCCATCT+TGG | 0.371873 | 4.4:-46405691 | None:intergenic |
| TATATTGTGGCAGAGTCTTA+TGG | 0.374499 | 4.4:+46406801 | MS.gene007761:CDS |
| ACTTATGTAGGTGTGGCATT+AGG | 0.381627 | 4.4:+46407284 | MS.gene007761:intron |
| AGAAGAAGACCTTGTCCTTA+GGG | 0.396772 | 4.4:-46408185 | None:intergenic |
| GAGAAGAAGACCTTGTCCTT+AGG | 0.404625 | 4.4:-46408186 | None:intergenic |
| GAAGAATCTTCCACTCTGTA+TGG | 0.410067 | 4.4:-46405878 | None:intergenic |
| GTCTCAAGACTCGATGATAA+TGG | 0.410949 | 4.4:+46407568 | MS.gene007761:CDS |
| CCAAGATGGATCAGAAGAAT+GGG | 0.416640 | 4.4:+46405691 | MS.gene007761:CDS |
| AACAACCATGTTGAATTCCT+TGG | 0.417373 | 4.4:-46406228 | None:intergenic |
| AACCCAAGCTTCAGTCCCTT+TGG | 0.424615 | 4.4:-46408892 | None:intergenic |
| TACAATTTCTTGGTCGATGC+GGG | 0.430582 | 4.4:+46408082 | MS.gene007761:CDS |
| CCTTAGGGAAGTAAGATACT+TGG | 0.431765 | 4.4:-46408170 | None:intergenic |
| TTCTTGGTCGATGCGGGAAG+TGG | 0.440552 | 4.4:+46408088 | MS.gene007761:CDS |
| AAACTGTATCCTGTTCCAAC+TGG | 0.449212 | 4.4:-46406666 | None:intergenic |
| TTCTATTGGATTCTTGGAGC+TGG | 0.449461 | 4.4:+46409338 | MS.gene007761:CDS |
| AAAAGGAGATCTCTTGTTTG+TGG | 0.452395 | 4.4:+46406251 | MS.gene007761:CDS |
| GATAGGGTGCTTCAAGTGTT+GGG | 0.454781 | 4.4:+46406160 | MS.gene007761:intron |
| ATTATAGGTTGATCAGCTAC+TGG | 0.456406 | 4.4:+46408566 | MS.gene007761:intron |
| AAGAGAAGAATGATGGGAAA+AGG | 0.459345 | 4.4:-46405623 | None:intergenic |
| GAAACACAAGGTTGATCATT+GGG | 0.459409 | 4.4:-46410890 | None:intergenic |
| ATCTGAATTTGCAGTTGTCA+TGG | 0.459985 | 4.4:+46407527 | MS.gene007761:intron |
| TCTTTATTCCGTAGGTGGGA+AGG | 0.462971 | 4.4:+46409221 | MS.gene007761:intron |
| AAGGGACTGAAGCTTGGGTT+AGG | 0.462980 | 4.4:+46408895 | MS.gene007761:CDS |
| GGTTGATCAGCTACTGGCTA+AGG | 0.466777 | 4.4:+46408572 | MS.gene007761:intron |
| ACCAAGATGGATCAGAAGAA+TGG | 0.467901 | 4.4:+46405690 | MS.gene007761:CDS |
| TACCAAAGGGACTGAAGCTT+GGG | 0.469620 | 4.4:+46408890 | MS.gene007761:CDS |
| TGAAACACAAGGTTGATCAT+TGG | 0.472820 | 4.4:-46410891 | None:intergenic |
| GGATAGGGTGCTTCAAGTGT+TGG | 0.474248 | 4.4:+46406159 | MS.gene007761:intron |
| CTACCAAAGGGACTGAAGCT+TGG | 0.476951 | 4.4:+46408889 | MS.gene007761:CDS |
| CAGGACAATCCAGTTGGAAC+AGG | 0.483965 | 4.4:+46406657 | MS.gene007761:intron |
| TCTGAATTTGCAGTTGTCAT+GGG | 0.484342 | 4.4:+46407528 | MS.gene007761:intron |
| ATCTAATTTGTGCTACCAAA+GGG | 0.486363 | 4.4:+46408877 | MS.gene007761:CDS |
| AAAGAGTCCTTTGTATATTG+TGG | 0.487684 | 4.4:+46406788 | MS.gene007761:CDS |
| TGAAAGGAAGAGAAGAATGA+TGG | 0.491714 | 4.4:-46405630 | None:intergenic |
| CTTTATTCCGTAGGTGGGAA+GGG | 0.493124 | 4.4:+46409222 | MS.gene007761:intron |
| GATTAATAAAAGAAAGATCA+AGG | 0.496246 | 4.4:+46408137 | MS.gene007761:CDS |
| AGGACAAGGTCTTCTTCTCC+TGG | 0.502448 | 4.4:+46408190 | MS.gene007761:CDS |
| AGCCATGGCCAATAATTCTC+TGG | 0.505294 | 4.4:+46405903 | MS.gene007761:CDS |
| ACTTCAGTAGTTCATGTAGC+TGG | 0.515478 | 4.4:-46410944 | None:intergenic |
| GGTGCTTCAAGTGTTGGGAT+TGG | 0.517501 | 4.4:+46406165 | MS.gene007761:CDS |
| AAATTGAAACTTACACTTGG+AGG | 0.521572 | 4.4:+46406879 | MS.gene007761:CDS |
| TAAAAGAAAGATCAAGGAAG+AGG | 0.522688 | 4.4:+46408143 | MS.gene007761:CDS |
| TTAATGATGCAACTGACTCA+TGG | 0.525154 | 4.4:+46407763 | MS.gene007761:CDS |
| AACCAGAGAATTATTGGCCA+TGG | 0.526681 | 4.4:-46405905 | None:intergenic |
| TGGATACCAGCTTGAAGCCA+AGG | 0.530260 | 4.4:+46406211 | MS.gene007761:CDS |
| TGAATTCCTTGGCTTCAAGC+TGG | 0.530298 | 4.4:-46406217 | None:intergenic |
| ATCAAGAAGCAACTTGAAGA+TGG | 0.537399 | 4.4:+46407735 | MS.gene007761:CDS |
| CCTGGTGGTGATGATAAACT+TGG | 0.538460 | 4.4:+46408208 | MS.gene007761:CDS |
| GATCTAATTTGTGCTACCAA+AGG | 0.546200 | 4.4:+46408876 | MS.gene007761:CDS |
| GAAAGGAAGAGAAGAATGAT+GGG | 0.550285 | 4.4:-46405629 | None:intergenic |
| TTTGTTACCACCACAGTAGA+GGG | 0.555703 | 4.4:-46409276 | None:intergenic |
| AAGACTCGATGATAATGGAC+TGG | 0.560259 | 4.4:+46407573 | MS.gene007761:CDS |
| TCCATTGTAGACAGTAACAT+TGG | 0.569749 | 4.4:-46408598 | None:intergenic |
| GACATATCAGCAATGGCAGT+AGG | 0.570461 | 4.4:+46408115 | MS.gene007761:CDS |
| CCAATAATTCTCTGGTTGCA+GGG | 0.571892 | 4.4:+46405911 | MS.gene007761:CDS |
| CCAAGTATCTTACTTCCCTA+AGG | 0.573294 | 4.4:+46408170 | MS.gene007761:CDS |
| CTTGAGACGTCTTTGAGTAG+AGG | 0.578247 | 4.4:-46407553 | None:intergenic |
| TATGAAGCCAAGAATTGATG+AGG | 0.578416 | 4.4:+46408439 | MS.gene007761:CDS |
| AAGAAATTGAAACTTACACT+TGG | 0.579577 | 4.4:+46406876 | MS.gene007761:CDS |
| CTGAATTTGCAGTTGTCATG+GGG | 0.584944 | 4.4:+46407529 | MS.gene007761:intron |
| GTATTTGATTATAGATGGGG+GGG | 0.585160 | 4.4:+46408377 | MS.gene007761:intron |
| GTTGATCAGCTACTGGCTAA+GGG | 0.587456 | 4.4:+46408573 | MS.gene007761:CDS |
| TGGAAGATTCTTCAAAGCCA+TGG | 0.593562 | 4.4:+46405888 | MS.gene007761:CDS |
| GGCTTCAAGCTGGTATCCAA+AGG | 0.594499 | 4.4:-46406207 | None:intergenic |
| ATTTGTTACCACCACAGTAG+AGG | 0.594837 | 4.4:-46409277 | None:intergenic |
| TTACAATTTCTTGGTCGATG+CGG | 0.596051 | 4.4:+46408081 | MS.gene007761:CDS |
| GTGTGGCATTAGGAGACAGT+TGG | 0.599447 | 4.4:+46407294 | MS.gene007761:CDS |
| AGACTTACGTGACATTCTCA+GGG | 0.602881 | 4.4:-46408273 | None:intergenic |
| GACTCTGCCACAATATACAA+AGG | 0.610265 | 4.4:-46406795 | None:intergenic |
| ATAACACAGGACAATCCAGT+TGG | 0.618495 | 4.4:+46406651 | MS.gene007761:intron |
| ATCTTACTTCCCTAAGGACA+AGG | 0.618834 | 4.4:+46408176 | MS.gene007761:CDS |
| GCCAATGTTACTGTCTACAA+TGG | 0.619525 | 4.4:+46408597 | MS.gene007761:CDS |
| TGTATTTGATTATAGATGGG+GGG | 0.623364 | 4.4:+46408376 | MS.gene007761:intron |
| TGGTTCAGACATATCAGCAA+TGG | 0.623686 | 4.4:+46408108 | MS.gene007761:CDS |
| CCAAGTTTATCATCACCACC+AGG | 0.637624 | 4.4:-46408208 | None:intergenic |
| AAATAATTTAATCAACAATG+TGG | 0.638143 | 4.4:-46406745 | None:intergenic |
| TTCAATAAGCAGCAACAATG+TGG | 0.638580 | 4.4:+46407806 | MS.gene007761:CDS |
| TGAAGCCAAGGAATTCAACA+TGG | 0.659940 | 4.4:+46406223 | MS.gene007761:CDS |
| TGGAGATCAGTATTGCTCAG+AGG | 0.661077 | 4.4:+46407712 | MS.gene007761:intron |
| ACAAGGTCTTCTTCTCCTGG+TGG | 0.673235 | 4.4:+46408193 | MS.gene007761:CDS |
| GGTGGTAACAAATCGACCAA+AGG | 0.673311 | 4.4:+46409287 | MS.gene007761:CDS |
| GACAGAACACCCCTCTACTG+TGG | 0.677504 | 4.4:+46409266 | MS.gene007761:CDS |
| AGAACACCCCTCTACTGTGG+TGG | 0.678028 | 4.4:+46409269 | MS.gene007761:CDS |
| TTGTTACCACCACAGTAGAG+GGG | 0.680201 | 4.4:-46409275 | None:intergenic |
| CAAGATGGATCAGAAGAATG+GGG | 0.681105 | 4.4:+46405692 | MS.gene007761:CDS |
| ATCATTTGTAATGAAACACA+AGG | 0.682028 | 4.4:-46410902 | None:intergenic |
| CAACAATGTGGTCAAATCTG+TGG | 0.683124 | 4.4:-46406733 | None:intergenic |
| ATAATTCTCTGGTTGCAGGG+TGG | 0.685909 | 4.4:+46405914 | MS.gene007761:CDS |
| TTATAAAAGTCCATACAGAG+TGG | 0.699820 | 4.4:+46405868 | MS.gene007761:CDS |
| ATTGTGGCAGAGTCTTATGG+TGG | 0.705837 | 4.4:+46406804 | MS.gene007761:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAGTTTAATACAAAA+GGG | - | chr4.4:46407219-46407238 | None:intergenic | 10.0% |
| !! | TAAAAATAGTTTAATACAAA+AGG | - | chr4.4:46407220-46407239 | None:intergenic | 10.0% |
| !!! | AAGAAGATTTTTTTAAATTA+TGG | + | chr4.4:46408463-46408482 | MS.gene007761:intron | 10.0% |
| !!! | TATTTGAATTTTAGTTTTTA+AGG | + | chr4.4:46409551-46409570 | MS.gene007761:intron | 10.0% |
| !!! | TTAATTTTAAATTACAGTTA+TGG | + | chr4.4:46407389-46407408 | MS.gene007761:intron | 10.0% |
| !!! | TTATATATTTATAGTTGATA+TGG | - | chr4.4:46409479-46409498 | None:intergenic | 10.0% |
| !! | AAATAATTTAATCAACAATG+TGG | - | chr4.4:46406748-46406767 | None:intergenic | 15.0% |
| !! | ACTTATATGAATTAAATACA+AGG | - | chr4.4:46406359-46406378 | None:intergenic | 15.0% |
| !! | CTAGTTACTATTAATAAATT+TGG | + | chr4.4:46409614-46409633 | MS.gene007761:intron | 15.0% |
| !! | GTTCAATAAAATAAACTTAT+TGG | - | chr4.4:46407362-46407381 | None:intergenic | 15.0% |
| !! | TATTAATAAATTTGGAAATG+TGG | + | chr4.4:46409622-46409641 | MS.gene007761:intron | 15.0% |
| !! | TCATTATAGTAATATTTCAT+CGG | + | chr4.4:46408535-46408554 | MS.gene007761:intron | 15.0% |
| !!! | AAAATCATACTTTTTCTTTA+AGG | - | chr4.4:46407253-46407272 | None:intergenic | 15.0% |
| !!! | AGATAAAATTCTCTTATTTT+TGG | + | chr4.4:46409912-46409931 | MS.gene007761:intron | 15.0% |
| !!! | ATCAAATATTTTTAGTGATT+TGG | - | chr4.4:46406425-46406444 | None:intergenic | 15.0% |
| !!! | CTTAAATTTTTTGTTGAAAT+AGG | + | chr4.4:46408054-46408073 | MS.gene007761:intron | 15.0% |
| !!! | GCATTTTCTTAAATTATTAT+CGG | + | chr4.4:46407993-46408012 | MS.gene007761:intron | 15.0% |
| !!! | TAAAGAAAAAGTATGATTTT+GGG | + | chr4.4:46407253-46407272 | MS.gene007761:intron | 15.0% |
| !!! | TAGTTCAATTAGTTTAATTA+CGG | - | chr4.4:46409108-46409127 | None:intergenic | 15.0% |
| !!! | TTAAAGAAAAAGTATGATTT+TGG | + | chr4.4:46407252-46407271 | MS.gene007761:intron | 15.0% |
| !!! | TTTCCAAATTCTATATTTTA+CGG | + | chr4.4:46409745-46409764 | MS.gene007761:intron | 15.0% |
| !!! | TTTTAGATATAAAAATCAGA+AGG | + | chr4.4:46410355-46410374 | MS.gene007761:intron | 15.0% |
| !! | AAACCGTAAAATATAGAATT+TGG | - | chr4.4:46409751-46409770 | None:intergenic | 20.0% |
| !! | AAAGCCAATGTTATAAAAAT+CGG | + | chr4.4:46408978-46408997 | MS.gene007761:intron | 20.0% |
| !! | AAAGTGTGTTTGATTATTAT+AGG | + | chr4.4:46408851-46408870 | MS.gene007761:intron | 20.0% |
| !! | AAGCAAAAAAACAATATTGT+AGG | + | chr4.4:46410664-46410683 | MS.gene007761:intron | 20.0% |
| !! | AGTTTAATTACGGTTTAATT+TGG | - | chr4.4:46409098-46409117 | None:intergenic | 20.0% |
| !! | ATAAATTCTGACTAATGAAT+GGG | + | chr4.4:46407149-46407168 | MS.gene007761:intron | 20.0% |
| !! | ATATAAGAGAACTCATTTAT+GGG | - | chr4.4:46407857-46407876 | None:intergenic | 20.0% |
| !! | ATATAATTCAGTGTAATCAT+AGG | + | chr4.4:46407064-46407083 | MS.gene007761:intron | 20.0% |
| !! | CATTCATTTAATGATATATG+TGG | + | chr4.4:46410689-46410708 | MS.gene007761:intron | 20.0% |
| !! | CATTGAAATTAATAAATCCT+TGG | + | chr4.4:46405962-46405981 | MS.gene007761:intron | 20.0% |
| !! | GAAAATAATGCAAGAAAAAA+GGG | + | chr4.4:46410382-46410401 | MS.gene007761:intron | 20.0% |
| !! | GAAAATGAATAAGATACTAT+TGG | + | chr4.4:46408669-46408688 | MS.gene007761:intron | 20.0% |
| !! | GATTAATAAAAGAAAGATCA+AGG | + | chr4.4:46408137-46408156 | MS.gene007761:CDS | 20.0% |
| !! | TAAAATAACTATGACGATTA+CGG | - | chr4.4:46406504-46406523 | None:intergenic | 20.0% |
| !! | TATATAAGAGAACTCATTTA+TGG | - | chr4.4:46407858-46407877 | None:intergenic | 20.0% |
| !! | TCTTTAGTAAGAAGAAAAAA+AGG | + | chr4.4:46410549-46410568 | MS.gene007761:intron | 20.0% |
| !! | TGAAAATAATGCAAGAAAAA+AGG | + | chr4.4:46410381-46410400 | MS.gene007761:intron | 20.0% |
| !! | TGAAAGAGTAAAACTATTTA+TGG | + | chr4.4:46406554-46406573 | MS.gene007761:intron | 20.0% |
| !! | TTAGTTTCGATAATAATAAG+AGG | + | chr4.4:46408647-46408666 | MS.gene007761:intron | 20.0% |
| !!! | ATAAGCAAAAATCAACATTT+TGG | - | chr4.4:46410754-46410773 | None:intergenic | 20.0% |
| !!! | ATAGGATTTTTACAATTTCT+TGG | + | chr4.4:46408072-46408091 | MS.gene007761:intron | 20.0% |
| !!! | ATATTTTCATATCATTGGAT+AGG | + | chr4.4:46406143-46406162 | MS.gene007761:intron | 20.0% |
| !!! | ATGAGATATTTTCATATCAT+TGG | + | chr4.4:46406138-46406157 | MS.gene007761:intron | 20.0% |
| !!! | ATTCTTATCTTCTTTTTTCA+CGG | + | chr4.4:46409520-46409539 | MS.gene007761:intron | 20.0% |
| !!! | ATTGGTCTTATTTCAATTTA+TGG | + | chr4.4:46406949-46406968 | MS.gene007761:intron | 20.0% |
| !!! | GTAGTACTATAATTTTAATG+TGG | - | chr4.4:46409965-46409984 | None:intergenic | 20.0% |
| !!! | GTATTTTCTTCAAAATACTT+AGG | + | chr4.4:46410026-46410045 | MS.gene007761:intron | 20.0% |
| !!! | TATTTTCATATCATTGGATA+GGG | + | chr4.4:46406144-46406163 | MS.gene007761:intron | 20.0% |
| !!! | TCATCGGAATTTTTTATTAT+AGG | + | chr4.4:46408551-46408570 | MS.gene007761:intron | 20.0% |
| !!! | TTTAATGTTTTTTTTTCCGA+AGG | - | chr4.4:46408834-46408853 | None:intergenic | 20.0% |
| !!! | TTTCATTTTGTTATGTCATA+AGG | + | chr4.4:46410814-46410833 | MS.gene007761:intron | 20.0% |
| ! | AAAATTTCTGCTTGAAAAGA+TGG | - | chr4.4:46407625-46407644 | None:intergenic | 25.0% |
| ! | AAATTTCTGCTTGAAAAGAT+GGG | - | chr4.4:46407624-46407643 | None:intergenic | 25.0% |
| ! | AAGAAATTGAAACTTACACT+TGG | + | chr4.4:46406876-46406895 | MS.gene007761:CDS | 25.0% |
| ! | AAGATAAGTGAAAACTTCAT+TGG | - | chr4.4:46408408-46408427 | None:intergenic | 25.0% |
| ! | AATTCAACATGGTTGTTAAA+AGG | + | chr4.4:46406234-46406253 | MS.gene007761:CDS | 25.0% |
| ! | ACAAAAACCTACAATTCTAT+TGG | + | chr4.4:46409324-46409343 | MS.gene007761:CDS | 25.0% |
| ! | ACCTTTATATTGTGGTAAAA+TGG | + | chr4.4:46407423-46407442 | MS.gene007761:intron | 25.0% |
| ! | ACTGTGTATTTGATTATAGA+TGG | + | chr4.4:46408372-46408391 | MS.gene007761:intron | 25.0% |
| ! | ATAAACACAAAAGACTTACT+AGG | - | chr4.4:46405734-46405753 | None:intergenic | 25.0% |
| ! | ATCATTTGTAATGAAACACA+AGG | - | chr4.4:46410905-46410924 | None:intergenic | 25.0% |
| ! | CAGACTTAATATATACATTG+TGG | - | chr4.4:46407886-46407905 | None:intergenic | 25.0% |
| ! | CATAAATTCTGACTAATGAA+TGG | + | chr4.4:46407148-46407167 | MS.gene007761:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr4.4:46410728-46410747 | None:intergenic | 25.0% |
| ! | CTGTGTATTTGATTATAGAT+GGG | + | chr4.4:46408373-46408392 | MS.gene007761:intron | 25.0% |
| ! | TGTGTATTTGATTATAGATG+GGG | + | chr4.4:46408374-46408393 | MS.gene007761:intron | 25.0% |
| ! | TTATACACAAACACAGAAAA+TGG | - | chr4.4:46406119-46406138 | None:intergenic | 25.0% |
| !! | AACTTTTCATTCATGGTTAA+AGG | - | chr4.4:46408305-46408324 | None:intergenic | 25.0% |
| !! | ACGTTTTGTAGAAGAAAAAA+TGG | - | chr4.4:46405656-46405675 | None:intergenic | 25.0% |
| !! | TAGTAAGTCTTTTGTGTTTA+TGG | + | chr4.4:46405733-46405752 | MS.gene007761:intron | 25.0% |
| !! | TCCATTTTACCACAATATAA+AGG | - | chr4.4:46407427-46407446 | None:intergenic | 25.0% |
| !! | TGAACAAAACTTTTCATTCA+TGG | - | chr4.4:46408312-46408331 | None:intergenic | 25.0% |
| !! | TGATCCGATTTTTATAACAT+TGG | - | chr4.4:46408985-46409004 | None:intergenic | 25.0% |
| !! | TTTATCTAACAAACCCATTT+TGG | + | chr4.4:46407692-46407711 | MS.gene007761:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr4.4:46410763-46410782 | MS.gene007761:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr4.4:46410782-46410763 | None:intergenic | 25.0% |
| !!! | AAATCTTGTTTTTGACTATG+TGG | + | chr4.4:46406596-46406615 | MS.gene007761:intron | 25.0% |
| !!! | ATAGTTGTTTTAGTGATGAT+TGG | - | chr4.4:46409382-46409401 | None:intergenic | 25.0% |
| !!! | TTTTTATAACATTGGCTTTG+AGG | - | chr4.4:46408977-46408996 | None:intergenic | 25.0% |
| AAAATTCTATGTGAGCAAGA+AGG | + | chr4.4:46409788-46409807 | MS.gene007761:intron | 30.0% | |
| AAAGAGTCCTTTGTATATTG+TGG | + | chr4.4:46406788-46406807 | MS.gene007761:CDS | 30.0% | |
| AAATTCTATGTGAGCAAGAA+GGG | + | chr4.4:46409789-46409808 | MS.gene007761:intron | 30.0% | |
| AAATTGAAACTTACACTTGG+AGG | + | chr4.4:46406879-46406898 | MS.gene007761:CDS | 30.0% | |
| AACATTATGGATTTATGGTC+AGG | + | chr4.4:46410511-46410530 | MS.gene007761:intron | 30.0% | |
| ATCAACATAATCATGTGTGT+TGG | + | chr4.4:46406034-46406053 | MS.gene007761:intron | 30.0% | |
| ATCTTCTTTCTTTATTCCGT+AGG | + | chr4.4:46409213-46409232 | MS.gene007761:intron | 30.0% | |
| CAAGAATCCAATAGAATTGT+AGG | - | chr4.4:46409334-46409353 | None:intergenic | 30.0% | |
| CTACAATTCTATTGGATTCT+TGG | + | chr4.4:46409332-46409351 | MS.gene007761:CDS | 30.0% | |
| GAGGAAACATTATGGATTTA+TGG | + | chr4.4:46410506-46410525 | MS.gene007761:intron | 30.0% | |
| GTAATCTCAAATATCGATGT+CGG | + | chr4.4:46410269-46410288 | MS.gene007761:intron | 30.0% | |
| GTAGAAGAAAAAATGGTGAA+AGG | - | chr4.4:46405649-46405668 | None:intergenic | 30.0% | |
| GTAGTTAAGCAATCATTTCA+AGG | - | chr4.4:46408354-46408373 | None:intergenic | 30.0% | |
| GTATGACTTGAAAAATCCTT+TGG | - | chr4.4:46409306-46409325 | None:intergenic | 30.0% | |
| GTGTATTTGATTATAGATGG+GGG | + | chr4.4:46408375-46408394 | MS.gene007761:intron | 30.0% | |
| TAAAAGAAAGATCAAGGAAG+AGG | + | chr4.4:46408143-46408162 | MS.gene007761:CDS | 30.0% | |
| TAGTCAGAATTTATGAAGCA+CGG | - | chr4.4:46407143-46407162 | None:intergenic | 30.0% | |
| TCAACATCGATAATAATCTG+AGG | + | chr4.4:46406000-46406019 | MS.gene007761:intron | 30.0% | |
| TGTATTTGATTATAGATGGG+GGG | + | chr4.4:46408376-46408395 | MS.gene007761:intron | 30.0% | |
| TTACTAAAGAGACAGTAACT+AGG | - | chr4.4:46410539-46410558 | None:intergenic | 30.0% | |
| TTACTTACCACAAAATCTTC+TGG | - | chr4.4:46407326-46407345 | None:intergenic | 30.0% | |
| TTATAAAAGTCCATACAGAG+TGG | + | chr4.4:46405868-46405887 | MS.gene007761:CDS | 30.0% | |
| TTGATGTCATATGATAACAC+AGG | + | chr4.4:46406638-46406657 | MS.gene007761:intron | 30.0% | |
| ! | AACTTTTACTTATGTAGGTG+TGG | + | chr4.4:46407277-46407296 | MS.gene007761:intron | 30.0% |
| ! | ACATTGAGTTTTTGTGACAT+TGG | + | chr4.4:46410051-46410070 | MS.gene007761:intron | 30.0% |
| ! | ATCTAATTTGTGCTACCAAA+GGG | + | chr4.4:46408877-46408896 | MS.gene007761:CDS | 30.0% |
| ! | CATTAAAGTGTGTTTTCCTT+CGG | + | chr4.4:46408815-46408834 | MS.gene007761:intron | 30.0% |
| ! | CTTTTAACAGCTCATTCATA+TGG | + | chr4.4:46409707-46409726 | MS.gene007761:intron | 30.0% |
| ! | GAAGTTTTCACTTATCTTGA+AGG | + | chr4.4:46408410-46408429 | MS.gene007761:CDS | 30.0% |
| ! | TGGGAAACTTTTACTTATGT+AGG | + | chr4.4:46407272-46407291 | MS.gene007761:intron | 30.0% |
| !! | ATTGGAAATTTTGAAGAGGT+TGG | + | chr4.4:46406183-46406202 | MS.gene007761:CDS | 30.0% |
| !! | TAACTTGTTCTTCTTTGTGT+TGG | + | chr4.4:46407178-46407197 | MS.gene007761:intron | 30.0% |
| !!! | AAAAGCACTTTTCATGATGA+TGG | - | chr4.4:46406300-46406319 | None:intergenic | 30.0% |
| AAAAATCGGATCAGACTAGT+CGG | + | chr4.4:46408992-46409011 | MS.gene007761:intron | 35.0% | |
| AAACTTGGCGCTTTACTAAA+TGG | + | chr4.4:46408223-46408242 | MS.gene007761:CDS | 35.0% | |
| AAATGTGGAAGATCTTTAGG+GGG | + | chr4.4:46409637-46409656 | MS.gene007761:intron | 35.0% | |
| AACAACCATGTTGAATTCCT+TGG | - | chr4.4:46406231-46406250 | None:intergenic | 35.0% | |
| AAGGGCTAAAAAGTTTCTTG+GGG | + | chr4.4:46409240-46409259 | MS.gene007761:CDS | 35.0% | |
| AATGGATAGTAAAGCTCTTC+AGG | - | chr4.4:46406101-46406120 | None:intergenic | 35.0% | |
| ACAGCTTTCAAAAACCAAGA+TGG | + | chr4.4:46405677-46405696 | MS.gene007761:CDS | 35.0% | |
| ACATTTCTCTGTGTTGTATC+GGG | - | chr4.4:46407955-46407974 | None:intergenic | 35.0% | |
| ACCACCATTCAGATCTAAAT+GGG | + | chr4.4:46410452-46410471 | MS.gene007761:intron | 35.0% | |
| AGCAATACTGATCTCCAAAA+TGG | - | chr4.4:46407709-46407728 | None:intergenic | 35.0% | |
| ATCAAGAAGCAACTTGAAGA+TGG | + | chr4.4:46407735-46407754 | MS.gene007761:CDS | 35.0% | |
| ATCCATAATGTTTCCTCACA+AGG | - | chr4.4:46410503-46410522 | None:intergenic | 35.0% | |
| ATCTGAATTTGCAGTTGTCA+TGG | + | chr4.4:46407527-46407546 | MS.gene007761:intron | 35.0% | |
| ATGTGTCTGTATCTCTTCAA+AGG | - | chr4.4:46410216-46410235 | None:intergenic | 35.0% | |
| CACATTTCTCTGTGTTGTAT+CGG | - | chr4.4:46407956-46407975 | None:intergenic | 35.0% | |
| CTGTAATTGTAGTTGCAATG+CGG | + | chr4.4:46407458-46407477 | MS.gene007761:intron | 35.0% | |
| CTTCTTACCTCATCAATTCT+TGG | - | chr4.4:46408449-46408468 | None:intergenic | 35.0% | |
| GAAAGGAAGAGAAGAATGAT+GGG | - | chr4.4:46405632-46405651 | None:intergenic | 35.0% | |
| GAAATGTGGAAGATCTTTAG+GGG | + | chr4.4:46409636-46409655 | MS.gene007761:intron | 35.0% | |
| GAAGGGCTAAAAAGTTTCTT+GGG | + | chr4.4:46409239-46409258 | MS.gene007761:CDS | 35.0% | |
| GCAATACTGATCTCCAAAAT+GGG | - | chr4.4:46407708-46407727 | None:intergenic | 35.0% | |
| GGAAATGTGGAAGATCTTTA+GGG | + | chr4.4:46409635-46409654 | MS.gene007761:intron | 35.0% | |
| GTATCCCATTTAGATCTGAA+TGG | - | chr4.4:46410459-46410478 | None:intergenic | 35.0% | |
| GTATTTGATTATAGATGGGG+GGG | + | chr4.4:46408377-46408396 | MS.gene007761:intron | 35.0% | |
| TACCACCATTCAGATCTAAA+TGG | + | chr4.4:46410451-46410470 | MS.gene007761:intron | 35.0% | |
| TACCTTGTGAGGAAACATTA+TGG | + | chr4.4:46410498-46410517 | MS.gene007761:intron | 35.0% | |
| TATATTGTGGCAGAGTCTTA+TGG | + | chr4.4:46406801-46406820 | MS.gene007761:CDS | 35.0% | |
| TATGAAGCCAAGAATTGATG+AGG | + | chr4.4:46408439-46408458 | MS.gene007761:CDS | 35.0% | |
| TATTTGATTATAGATGGGGG+GGG | + | chr4.4:46408378-46408397 | MS.gene007761:intron | 35.0% | |
| TCAGATTTCAGATCTCAGAT+TGG | + | chr4.4:46406931-46406950 | MS.gene007761:intron | 35.0% | |
| TCCATTGTAGACAGTAACAT+TGG | - | chr4.4:46408601-46408620 | None:intergenic | 35.0% | |
| TCTGAATTTGCAGTTGTCAT+GGG | + | chr4.4:46407528-46407547 | MS.gene007761:intron | 35.0% | |
| TCTTTCTTTATTCCGTAGGT+GGG | + | chr4.4:46409217-46409236 | MS.gene007761:intron | 35.0% | |
| TGAAAGGAAGAGAAGAATGA+TGG | - | chr4.4:46405633-46405652 | None:intergenic | 35.0% | |
| TGGAAATGTGGAAGATCTTT+AGG | + | chr4.4:46409634-46409653 | MS.gene007761:intron | 35.0% | |
| TTACAATTTCTTGGTCGATG+CGG | + | chr4.4:46408081-46408100 | MS.gene007761:CDS | 35.0% | |
| TTATCGATGTTGACATGTGT+CGG | - | chr4.4:46405993-46406012 | None:intergenic | 35.0% | |
| TTCAATAAGCAGCAACAATG+TGG | + | chr4.4:46407806-46407825 | MS.gene007761:CDS | 35.0% | |
| TTCTTTCTTTATTCCGTAGG+TGG | + | chr4.4:46409216-46409235 | MS.gene007761:intron | 35.0% | |
| ! | AAAAGGAGATCTCTTGTTTG+TGG | + | chr4.4:46406251-46406270 | MS.gene007761:CDS | 35.0% |
| ! | AAGAGAAGAATGATGGGAAA+AGG | - | chr4.4:46405626-46405645 | None:intergenic | 35.0% |
| ! | AGCTTTTACACTATGTTGTC+CGG | - | chr4.4:46410324-46410343 | None:intergenic | 35.0% |
| ! | GAAACACAAGGTTGATCATT+GGG | - | chr4.4:46410893-46410912 | None:intergenic | 35.0% |
| ! | GATCTAATTTGTGCTACCAA+AGG | + | chr4.4:46408876-46408895 | MS.gene007761:CDS | 35.0% |
| ! | GATCTCTTGTTTGTGGTAAT+TGG | + | chr4.4:46406258-46406277 | MS.gene007761:intron | 35.0% |
| ! | TACTATTGGACATGTTGACT+TGG | + | chr4.4:46408683-46408702 | MS.gene007761:intron | 35.0% |
| ! | TGAAACACAAGGTTGATCAT+TGG | - | chr4.4:46410894-46410913 | None:intergenic | 35.0% |
| ! | TGAGATCTGAAATCTGAAGA+TGG | - | chr4.4:46406928-46406947 | None:intergenic | 35.0% |
| ! | TGTAATCATAGGTGTTGTGT+CGG | + | chr4.4:46407075-46407094 | MS.gene007761:intron | 35.0% |
| ! | TTAATGATGCAACTGACTCA+TGG | + | chr4.4:46407763-46407782 | MS.gene007761:CDS | 35.0% |
| !! | ACCAATCAAAGAGTACTTAC+AGG | - | chr4.4:46405941-46405960 | None:intergenic | 35.0% |
| !! | ATGGACTGGAAAAATCAAAC+AGG | + | chr4.4:46407587-46407606 | MS.gene007761:CDS | 35.0% |
| !! | ATTATAGGTTGATCAGCTAC+TGG | + | chr4.4:46408566-46408585 | MS.gene007761:intron | 35.0% |
| !! | CATTGATTCGATATTCGATC+CGG | + | chr4.4:46409147-46409166 | MS.gene007761:intron | 35.0% |
| !! | CCAATCAAAGAGTACTTACA+GGG | - | chr4.4:46405940-46405959 | None:intergenic | 35.0% |
| !! | TGGGATTGGAAATTTTGAAG+AGG | + | chr4.4:46406179-46406198 | MS.gene007761:CDS | 35.0% |
| !! | TGTTCTTCTTTGTGTTGGTT+AGG | + | chr4.4:46407183-46407202 | MS.gene007761:intron | 35.0% |
| !! | TTGTGTTGGTTAGGAAATGA+TGG | + | chr4.4:46407192-46407211 | MS.gene007761:intron | 35.0% |
| !! | TTTGATCTAAAGTGTTGGTG+CGG | - | chr4.4:46407919-46407938 | None:intergenic | 35.0% |
| AAACTGTATCCTGTTCCAAC+TGG | - | chr4.4:46406669-46406688 | None:intergenic | 40.0% | |
| AACCAGAGAATTATTGGCCA+TGG | - | chr4.4:46405908-46405927 | None:intergenic | 40.0% | |
| ACCAAGATGGATCAGAAGAA+TGG | + | chr4.4:46405690-46405709 | MS.gene007761:CDS | 40.0% | |
| ACCTTCATTTGCGCTTAATG+AGG | + | chr4.4:46409665-46409684 | MS.gene007761:intron | 40.0% | |
| ACTATGACGATTACGGTGAA+CGG | - | chr4.4:46406497-46406516 | None:intergenic | 40.0% | |
| ACTGATGTGTATCAGACATC+GGG | + | chr4.4:46406065-46406084 | MS.gene007761:intron | 40.0% | |
| ACTTATGTAGGTGTGGCATT+AGG | + | chr4.4:46407284-46407303 | MS.gene007761:intron | 40.0% | |
| AGAAGAAGACCTTGTCCTTA+GGG | - | chr4.4:46408188-46408207 | None:intergenic | 40.0% | |
| AGACTTACGTGACATTCTCA+GGG | - | chr4.4:46408276-46408295 | None:intergenic | 40.0% | |
| ATAACACAGGACAATCCAGT+TGG | + | chr4.4:46406651-46406670 | MS.gene007761:intron | 40.0% | |
| ATCTTACTTCCCTAAGGACA+AGG | + | chr4.4:46408176-46408195 | MS.gene007761:CDS | 40.0% | |
| CAAAGGCAAGGGTTGTATTT+GGG | - | chr4.4:46410199-46410218 | None:intergenic | 40.0% | |
| CAACAATGTGGTCAAATCTG+TGG | - | chr4.4:46406736-46406755 | None:intergenic | 40.0% | |
| CAAGATGGATCAGAAGAATG+GGG | + | chr4.4:46405692-46405711 | MS.gene007761:CDS | 40.0% | |
| CACTGATGTGTATCAGACAT+CGG | + | chr4.4:46406064-46406083 | MS.gene007761:intron | 40.0% | |
| CAGAAGAAAGATACACCATC+CGG | - | chr4.4:46410785-46410804 | None:intergenic | 40.0% | |
| CCAAGATGGATCAGAAGAAT+GGG | + | chr4.4:46405691-46405710 | MS.gene007761:CDS | 40.0% | |
| CCAAGTATCTTACTTCCCTA+AGG | + | chr4.4:46408170-46408189 | MS.gene007761:CDS | 40.0% | |
| CCAATAATTCTCTGGTTGCA+GGG | + | chr4.4:46405911-46405930 | MS.gene007761:CDS | 40.0% | |
| CCCTGTAAGTACTCTTTGAT+TGG | + | chr4.4:46405937-46405956 | MS.gene007761:intron | 40.0% | |
| CCTTAGGGAAGTAAGATACT+TGG | - | chr4.4:46408173-46408192 | None:intergenic | 40.0% | |
| CGCTGCAAACCTTTATATTG+TGG | + | chr4.4:46407415-46407434 | MS.gene007761:intron | 40.0% | |
| CGCTTAATGAGGATCATCTT+AGG | + | chr4.4:46409676-46409695 | MS.gene007761:intron | 40.0% | |
| CTGAATTTGCAGTTGTCATG+GGG | + | chr4.4:46407529-46407548 | MS.gene007761:intron | 40.0% | |
| CTGTATCTCTTCAAAGGCAA+GGG | - | chr4.4:46410210-46410229 | None:intergenic | 40.0% | |
| GAAGAATCTTCCACTCTGTA+TGG | - | chr4.4:46405881-46405900 | None:intergenic | 40.0% | |
| GACTCTGCCACAATATACAA+AGG | - | chr4.4:46406798-46406817 | None:intergenic | 40.0% | |
| GATTCCTTAACTAGTGTCTC+TGG | - | chr4.4:46408517-46408536 | None:intergenic | 40.0% | |
| GCACCAACACTTTAGATCAA+AGG | + | chr4.4:46407918-46407937 | MS.gene007761:intron | 40.0% | |
| GCCAATGTTACTGTCTACAA+TGG | + | chr4.4:46408597-46408616 | MS.gene007761:CDS | 40.0% | |
| GCTCAAATTATTATCCGCGT+CGG | - | chr4.4:46407039-46407058 | None:intergenic | 40.0% | |
| GGAAGGGCTAAAAAGTTTCT+TGG | + | chr4.4:46409238-46409257 | MS.gene007761:CDS | 40.0% | |
| GTAGTGTTTACCGTTGAGTT+TGG | + | chr4.4:46409991-46410010 | MS.gene007761:intron | 40.0% | |
| GTCTCAAGACTCGATGATAA+TGG | + | chr4.4:46407568-46407587 | MS.gene007761:CDS | 40.0% | |
| TACAATTTCTTGGTCGATGC+GGG | + | chr4.4:46408082-46408101 | MS.gene007761:CDS | 40.0% | |
| TAGACTTACGTGACATTCTC+AGG | - | chr4.4:46408277-46408296 | None:intergenic | 40.0% | |
| TCAAAGGCAAGGGTTGTATT+TGG | - | chr4.4:46410200-46410219 | None:intergenic | 40.0% | |
| TCCCATTTAGATCTGAATGG+TGG | - | chr4.4:46410456-46410475 | None:intergenic | 40.0% | |
| TCCTCATTAAGCGCAAATGA+AGG | - | chr4.4:46409669-46409688 | None:intergenic | 40.0% | |
| TCTGTATCTCTTCAAAGGCA+AGG | - | chr4.4:46410211-46410230 | None:intergenic | 40.0% | |
| TGAAGCCAAGGAATTCAACA+TGG | + | chr4.4:46406223-46406242 | MS.gene007761:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr4.4:46410786-46410767 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+TGG | + | chr4.4:46410767-46410786 | MS.gene007761:intron | 40.0% | |
| TGGAAGATTCTTCAAAGCCA+TGG | + | chr4.4:46405888-46405907 | MS.gene007761:CDS | 40.0% | |
| TGGTTCAGACATATCAGCAA+TGG | + | chr4.4:46408108-46408127 | MS.gene007761:CDS | 40.0% | |
| TTCCTCACAAGGTAAACACA+CGG | - | chr4.4:46410492-46410511 | None:intergenic | 40.0% | |
| TTCTATTGGATTCTTGGAGC+TGG | + | chr4.4:46409338-46409357 | MS.gene007761:CDS | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr4.4:46410785-46410766 | None:intergenic | 40.0% | |
| TTTGTTACCACCACAGTAGA+GGG | - | chr4.4:46409279-46409298 | None:intergenic | 40.0% | |
| ! | AATGTGGAAGATCTTTAGGG+GGG | + | chr4.4:46409638-46409657 | MS.gene007761:intron | 40.0% |
| ! | ACGCCTTTGATCTAAAGTGT+TGG | - | chr4.4:46407924-46407943 | None:intergenic | 40.0% |
| ! | ATTTGTTACCACCACAGTAG+AGG | - | chr4.4:46409280-46409299 | None:intergenic | 40.0% |
| ! | ATTTGTTTGCTTGCTGCTGT+AGG | + | chr4.4:46410865-46410884 | MS.gene007761:intron | 40.0% |
| ! | GATCTCACCAGAAGATTTTG+TGG | + | chr4.4:46407316-46407335 | MS.gene007761:CDS | 40.0% |
| ! | TGGAACAGGATACAGTTTTG+TGG | + | chr4.4:46406671-46406690 | MS.gene007761:CDS | 40.0% |
| ! | TTTCTGATTGAAGGCGTGTT+CGG | - | chr4.4:46410298-46410317 | None:intergenic | 40.0% |
| !! | AACAGGATACAGTTTTGTGG+AGG | + | chr4.4:46406674-46406693 | MS.gene007761:CDS | 40.0% |
| !! | AAGACTCGATGATAATGGAC+TGG | + | chr4.4:46407573-46407592 | MS.gene007761:CDS | 40.0% |
| !! | CCAATGTTGACTTGTCTATC+CGG | - | chr4.4:46409169-46409188 | None:intergenic | 40.0% |
| !! | TTGCAGAAGCACACATGTTT+TGG | + | chr4.4:46405840-46405859 | MS.gene007761:intron | 40.0% |
| !! | TTTTGAAGAGGTTGGACCTT+TGG | + | chr4.4:46406191-46406210 | MS.gene007761:CDS | 40.0% |
| ACAAGATGATGTACACCCTC+CGG | + | chr4.4:46410631-46410650 | MS.gene007761:intron | 45.0% | |
| AGCCATGGCCAATAATTCTC+TGG | + | chr4.4:46405903-46405922 | MS.gene007761:CDS | 45.0% | |
| ATAATTCTCTGGTTGCAGGG+TGG | + | chr4.4:46405914-46405933 | MS.gene007761:CDS | 45.0% | |
| ATTGCTCACGCCAAACTCAA+CGG | - | chr4.4:46410004-46410023 | None:intergenic | 45.0% | |
| CCAAGTTTATCATCACCACC+AGG | - | chr4.4:46408211-46408230 | None:intergenic | 45.0% | |
| CCCATTCTTCTGATCCATCT+TGG | - | chr4.4:46405694-46405713 | None:intergenic | 45.0% | |
| CCCTGCAACCAGAGAATTAT+TGG | - | chr4.4:46405914-46405933 | None:intergenic | 45.0% | |
| CCGGATAGACAAGTCAACAT+TGG | + | chr4.4:46409166-46409185 | MS.gene007761:intron | 45.0% | |
| CGCCTTCAATCAGAAATGTC+CGG | + | chr4.4:46410302-46410321 | MS.gene007761:intron | 45.0% | |
| CTTGAGACGTCTTTGAGTAG+AGG | - | chr4.4:46407556-46407575 | None:intergenic | 45.0% | |
| CTTTATTCCGTAGGTGGGAA+GGG | + | chr4.4:46409222-46409241 | MS.gene007761:intron | 45.0% | |
| GACATATCAGCAATGGCAGT+AGG | + | chr4.4:46408115-46408134 | MS.gene007761:CDS | 45.0% | |
| GAGAAGAAGACCTTGTCCTT+AGG | - | chr4.4:46408189-46408208 | None:intergenic | 45.0% | |
| GCCAATAATTCTCTGGTTGC+AGG | + | chr4.4:46405910-46405929 | MS.gene007761:CDS | 45.0% | |
| GGTGGTAACAAATCGACCAA+AGG | + | chr4.4:46409287-46409306 | MS.gene007761:CDS | 45.0% | |
| GTCCGGACATTTCTGATTGA+AGG | - | chr4.4:46410307-46410326 | None:intergenic | 45.0% | |
| TACCAAAGGGACTGAAGCTT+GGG | + | chr4.4:46408890-46408909 | MS.gene007761:CDS | 45.0% | |
| TCTATGTGAGCAAGAAGGGT+CGG | + | chr4.4:46409793-46409812 | MS.gene007761:intron | 45.0% | |
| TCTTTATTCCGTAGGTGGGA+AGG | + | chr4.4:46409221-46409240 | MS.gene007761:intron | 45.0% | |
| TGAATTCCTTGGCTTCAAGC+TGG | - | chr4.4:46406220-46406239 | None:intergenic | 45.0% | |
| TGGAGATCAGTATTGCTCAG+AGG | + | chr4.4:46407712-46407731 | MS.gene007761:intron | 45.0% | |
| TTGTTACCACCACAGTAGAG+GGG | - | chr4.4:46409278-46409297 | None:intergenic | 45.0% | |
| ! | ATTGTGGCAGAGTCTTATGG+TGG | + | chr4.4:46406804-46406823 | MS.gene007761:CDS | 45.0% |
| ! | CCTGGTGGTGATGATAAACT+TGG | + | chr4.4:46408208-46408227 | MS.gene007761:CDS | 45.0% |
| ! | GATAGGGTGCTTCAAGTGTT+GGG | + | chr4.4:46406160-46406179 | MS.gene007761:intron | 45.0% |
| ! | GTTGATCAGCTACTGGCTAA+GGG | + | chr4.4:46408573-46408592 | MS.gene007761:CDS | 45.0% |
| !! | CAGAAGCACACATGTTTTGG+TGG | + | chr4.4:46405843-46405862 | MS.gene007761:intron | 45.0% |
| !! | GGCAAATTTGCTGTCACTCT+TGG | + | chr4.4:46406825-46406844 | MS.gene007761:CDS | 45.0% |
| !! | TTTTTAGCCCTTCCCACCTA+CGG | - | chr4.4:46409232-46409251 | None:intergenic | 45.0% |
| AACCCAAGCTTCAGTCCCTT+TGG | - | chr4.4:46408895-46408914 | None:intergenic | 50.0% | |
| AAGGGACTGAAGCTTGGGTT+AGG | + | chr4.4:46408895-46408914 | MS.gene007761:CDS | 50.0% | |
| AAGGGTCGGTCTAACACAAG+GGG | + | chr4.4:46409807-46409826 | MS.gene007761:intron | 50.0% | |
| ACAAGGTCTTCTTCTCCTGG+TGG | + | chr4.4:46408193-46408212 | MS.gene007761:CDS | 50.0% | |
| ACAGACACAGACACAGACAC+CGG | + | chr4.4:46406985-46407004 | MS.gene007761:intron | 50.0% | |
| AGAAGGGTCGGTCTAACACA+AGG | + | chr4.4:46409805-46409824 | MS.gene007761:intron | 50.0% | |
| AGGACAAGGTCTTCTTCTCC+TGG | + | chr4.4:46408190-46408209 | MS.gene007761:CDS | 50.0% | |
| CAAGGTAAACACACGGTCAC+TGG | - | chr4.4:46410485-46410504 | None:intergenic | 50.0% | |
| CACAGACACCGGACACAATA+CGG | + | chr4.4:46407002-46407021 | MS.gene007761:intron | 50.0% | |
| CAGGACAATCCAGTTGGAAC+AGG | + | chr4.4:46406657-46406676 | MS.gene007761:intron | 50.0% | |
| CGCACCAGAGACACTAGTTA+AGG | + | chr4.4:46408510-46408529 | MS.gene007761:intron | 50.0% | |
| CTACCAAAGGGACTGAAGCT+TGG | + | chr4.4:46408889-46408908 | MS.gene007761:CDS | 50.0% | |
| GAAGGGTCGGTCTAACACAA+GGG | + | chr4.4:46409806-46409825 | MS.gene007761:intron | 50.0% | |
| GACCGTGTGTTTACCTTGTG+AGG | + | chr4.4:46410487-46410506 | MS.gene007761:intron | 50.0% | |
| GGCTTCAAGCTGGTATCCAA+AGG | - | chr4.4:46406210-46406229 | None:intergenic | 50.0% | |
| GTCAGTGTCCGTATTGTGTC+CGG | - | chr4.4:46407013-46407032 | None:intergenic | 50.0% | |
| GTGTCTGTGTCTGTGTGTCA+GGG | + | chr4.4:46408015-46408034 | MS.gene007761:intron | 50.0% | |
| GTGTGGCATTAGGAGACAGT+TGG | + | chr4.4:46407294-46407313 | MS.gene007761:CDS | 50.0% | |
| GTTGCAATGCGGTTTGTCGA+CGG | + | chr4.4:46407469-46407488 | MS.gene007761:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr4.4:46407132-46407151 | None:intergenic | 50.0% | |
| TGGATACCAGCTTGAAGCCA+AGG | + | chr4.4:46406211-46406230 | MS.gene007761:CDS | 50.0% | |
| ! | GACATGTGTCGGTACTTCCA+AGG | - | chr4.4:46405982-46406001 | None:intergenic | 50.0% |
| ! | GGATAGGGTGCTTCAAGTGT+TGG | + | chr4.4:46406159-46406178 | MS.gene007761:intron | 50.0% |
| ! | GGTTGATCAGCTACTGGCTA+AGG | + | chr4.4:46408572-46408591 | MS.gene007761:intron | 50.0% |
| !! | GGTGCTTCAAGTGTTGGGAT+TGG | + | chr4.4:46406165-46406184 | MS.gene007761:CDS | 50.0% |
| AGAACACCCCTCTACTGTGG+TGG | + | chr4.4:46409269-46409288 | MS.gene007761:CDS | 55.0% | |
| GACAGAACACCCCTCTACTG+TGG | + | chr4.4:46409266-46409285 | MS.gene007761:CDS | 55.0% | |
| GATTAGGTGTGTCCCGGTGT+CGG | - | chr4.4:46407110-46407129 | None:intergenic | 55.0% | |
| GGTGTCTGTGTCTGTGTGTC+AGG | + | chr4.4:46408014-46408033 | MS.gene007761:intron | 55.0% | |
| TTCTTGGTCGATGCGGGAAG+TGG | + | chr4.4:46408088-46408107 | MS.gene007761:CDS | 55.0% | |
| ! | TCCTCGGATTAGGTGTGTCC+CGG | - | chr4.4:46407116-46407135 | None:intergenic | 55.0% |
| ACCGGGACACACCTAATCCG+AGG | + | chr4.4:46407112-46407131 | MS.gene007761:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr4.4:46407126-46407145 | None:intergenic | 60.0% | |
| TCGGTACACGTGTCCGACAC+CGG | + | chr4.4:46407094-46407113 | MS.gene007761:intron | 60.0% | |
| CGGTACACGTGTCCGACACC+GGG | + | chr4.4:46407095-46407114 | MS.gene007761:intron | 65.0% | |
| CGGACACTGACACGCCGACG+CGG | + | chr4.4:46407022-46407041 | MS.gene007761:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 46405608 | 46410955 | 46405608 | ID=MS.gene007761 |
| chr4.4 | mRNA | 46405608 | 46410955 | 46405608 | ID=MS.gene007761.t1;Parent=MS.gene007761 |
| chr4.4 | exon | 46405608 | 46405734 | 46405608 | ID=MS.gene007761.t1.exon1;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46405608 | 46405734 | 46405608 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46405846 | 46405940 | 46405846 | ID=MS.gene007761.t1.exon2;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46405846 | 46405940 | 46405846 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46406165 | 46406272 | 46406165 | ID=MS.gene007761.t1.exon3;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46406165 | 46406272 | 46406165 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46406660 | 46406900 | 46406660 | ID=MS.gene007761.t1.exon4;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46406660 | 46406900 | 46406660 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46407294 | 46407337 | 46407294 | ID=MS.gene007761.t1.exon5;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46407294 | 46407337 | 46407294 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46407541 | 46407608 | 46407541 | ID=MS.gene007761.t1.exon6;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46407541 | 46407608 | 46407541 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46407722 | 46407827 | 46407722 | ID=MS.gene007761.t1.exon7;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46407722 | 46407827 | 46407722 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46408076 | 46408287 | 46408076 | ID=MS.gene007761.t1.exon8;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46408076 | 46408287 | 46408076 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46408391 | 46408460 | 46408391 | ID=MS.gene007761.t1.exon9;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46408391 | 46408460 | 46408391 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46408573 | 46408623 | 46408573 | ID=MS.gene007761.t1.exon10;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46408573 | 46408623 | 46408573 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46408873 | 46408925 | 46408873 | ID=MS.gene007761.t1.exon11;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46408873 | 46408925 | 46408873 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46409235 | 46409367 | 46409235 | ID=MS.gene007761.t1.exon12;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46409235 | 46409367 | 46409235 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| chr4.4 | exon | 46410887 | 46410955 | 46410887 | ID=MS.gene007761.t1.exon13;Parent=MS.gene007761.t1 |
| chr4.4 | CDS | 46410887 | 46410955 | 46410887 | ID=cds.MS.gene007761.t1;Parent=MS.gene007761.t1 |
| Gene Sequence |
| Protein sequence |