AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80760.t1 MTR_4g021520 84.926 471 70 1 1 471 1 470 0.0 830
MS.gene80760.t1 MTR_4g021490 83.864 471 75 1 1 471 1 470 0.0 815
MS.gene80760.t1 MTR_4g021500 83.015 471 79 1 1 471 1 470 0.0 808
MS.gene80760.t1 MTR_4g021500 75.724 449 90 2 23 471 458 887 0.0 689
MS.gene80760.t1 MTR_4g021500 83.015 471 79 1 1 471 1 470 0.0 808
MS.gene80760.t1 MTR_4g021500 78.174 449 97 1 23 471 458 905 0.0 725
MS.gene80760.t1 MTR_4g021535 82.051 468 82 2 4 471 1 466 0.0 806
MS.gene80760.t1 MTR_4g021530 80.255 471 92 1 1 471 1 470 0.0 794
MS.gene80760.t1 MTR_4g021510 83.857 446 72 0 26 471 24 469 0.0 787
MS.gene80760.t1 MTR_4g021520 83.916 429 68 1 1 429 1 428 0.0 744
MS.gene80760.t1 MTR_4g021535 72.863 468 78 3 4 471 1 419 0.0 697
MS.gene80760.t1 MTR_3g100420 60.385 467 170 6 20 471 30 496 0.0 581
MS.gene80760.t1 MTR_2g018590 60.087 461 176 5 18 471 10 469 0.0 581
MS.gene80760.t1 MTR_2g018630 61.111 450 159 8 29 471 25 465 0.0 554
MS.gene80760.t1 MTR_2g018600 59.243 449 176 5 29 471 22 469 0.0 552
MS.gene80760.t1 MTR_2g018630 59.946 367 132 7 112 471 2 360 1.61e-153 441
MS.gene80760.t1 MTR_3g045770 39.130 460 258 9 15 467 6 450 2.74e-117 352
MS.gene80760.t1 MTR_8g011350 37.876 499 268 10 10 471 2 495 4.16e-117 353
MS.gene80760.t1 MTR_7g080180 36.821 497 256 12 19 466 6 493 3.93e-112 340
MS.gene80760.t1 MTR_7g051430 37.155 471 255 9 39 471 28 495 9.18e-112 339
MS.gene80760.t1 MTR_2g009200 38.675 468 238 10 16 471 9 439 3.99e-107 325
MS.gene80760.t1 MTR_8g011350 37.924 472 251 10 10 444 2 468 3.10e-106 324
MS.gene80760.t1 MTR_7g080180 35.652 460 238 12 19 429 6 456 6.70e-95 295
MS.gene80760.t1 MTR_7g051430 34.103 390 216 9 39 390 28 414 9.56e-73 236
MS.gene80760.t1 MTR_4g075150 30.172 464 297 14 19 471 13 460 1.35e-56 194
MS.gene80760.t1 MTR_4g075150 29.654 462 304 14 19 471 13 462 2.90e-56 194
MS.gene80760.t1 MTR_2g062990 30.716 433 271 14 44 466 43 456 1.18e-54 190
MS.gene80760.t1 MTR_2g062980 31.178 433 269 14 44 466 43 456 1.25e-54 189
MS.gene80760.t1 MTR_2g063000 30.664 437 270 16 44 467 42 458 1.97e-54 189
MS.gene80760.t1 MTR_2g012850 30.612 441 274 17 41 466 36 459 2.01e-53 186
MS.gene80760.t1 MTR_2g012860 29.778 450 284 15 38 471 39 472 2.56e-53 186
MS.gene80760.t1 MTR_2g081620 30.087 462 286 17 17 467 23 458 4.08e-53 186
MS.gene80760.t1 MTR_1g095560 30.297 472 294 16 12 468 1 452 4.10e-53 185
MS.gene80760.t1 MTR_1g095540 29.185 466 297 15 16 468 7 452 1.07e-52 184
MS.gene80760.t1 MTR_3g034290 28.798 441 280 15 40 471 74 489 2.41e-52 184
MS.gene80760.t1 MTR_1g021010 30.201 447 276 17 28 466 62 480 4.15e-52 183
MS.gene80760.t1 MTR_0003s0560 31.461 445 261 18 40 471 73 486 2.25e-51 181
MS.gene80760.t1 MTR_3g434850 27.311 476 301 14 13 471 6 453 3.13e-51 180
MS.gene80760.t1 MTR_8g099930 29.451 455 284 15 34 471 27 461 3.92e-51 180
MS.gene80760.t1 MTR_3g498755 28.414 454 286 13 37 471 11 444 8.69e-51 179
MS.gene80760.t1 MTR_7g013790 29.087 471 296 18 19 471 13 463 2.39e-50 178
MS.gene80760.t1 MTR_4g089155 30.227 440 279 16 41 466 54 479 3.33e-50 178
MS.gene80760.t1 MTR_3g079560 29.748 437 268 15 40 466 77 484 8.84e-50 177
MS.gene80760.t1 MTR_2g449850 28.510 463 272 16 29 466 28 456 2.03e-49 176
MS.gene80760.t1 MTR_3g090150 28.358 469 293 20 19 466 11 457 2.51e-49 176
MS.gene80760.t1 MTR_3g090130 28.894 443 277 16 41 466 29 450 2.54e-49 175
MS.gene80760.t1 MTR_1g020090 30.093 432 268 13 40 466 89 491 5.65e-49 175
MS.gene80760.t1 MTR_7g021130 26.907 472 308 13 16 471 6 456 7.86e-48 171
MS.gene80760.t1 MTR_1g040370 28.989 445 243 14 40 471 30 414 1.32e-47 169
MS.gene80760.t1 MTR_3g079590 28.995 438 270 16 40 466 77 484 3.96e-47 170
MS.gene80760.t1 MTR_5g072570 28.571 448 278 18 41 467 30 456 5.86e-47 169
MS.gene80760.t1 MTR_4g122950 27.708 480 301 17 17 467 10 472 1.07e-46 169
MS.gene80760.t1 MTR_4g122960 28.216 482 294 18 17 467 10 470 1.38e-46 168
MS.gene80760.t1 MTR_1g095560 28.770 504 292 19 12 468 1 484 1.45e-46 168
MS.gene80760.t1 MTR_1g021020 27.964 447 285 15 28 466 64 481 1.64e-46 168
MS.gene80760.t1 MTR_3g079570 28.736 435 274 14 40 466 78 484 1.89e-46 168
MS.gene80760.t1 MTR_2g063000 29.263 434 249 17 44 467 42 427 9.70e-45 162
MS.gene80760.t1 MTR_3g079600 28.798 441 270 17 40 466 75 485 1.92e-44 162
MS.gene80760.t1 MTR_4g057600 28.780 410 250 12 70 466 109 489 5.37e-42 156
MS.gene80760.t1 MTR_3g079620 27.840 449 273 19 38 466 75 492 2.96e-41 154
MS.gene80760.t1 MTR_3g079630 27.876 452 269 18 38 466 75 492 5.96e-40 150
MS.gene80760.t1 MTR_4g057570 29.858 422 236 18 70 467 103 488 1.18e-39 149
MS.gene80760.t1 MTR_4g057585 27.316 421 267 12 57 466 98 490 1.84e-38 146
MS.gene80760.t1 MTR_2g095750 26.847 406 264 12 70 466 114 495 1.96e-38 146
MS.gene80760.t1 MTR_4g057595 27.316 421 267 12 57 466 99 491 6.87e-38 145
MS.gene80760.t1 MTR_1g050545 28.186 408 254 15 70 465 97 477 4.20e-37 142
MS.gene80760.t1 MTR_1g102130 27.074 458 249 20 40 471 91 489 6.10e-35 136
MS.gene80760.t1 MTR_1g094155 28.087 413 247 17 70 465 104 483 3.57e-33 131
MS.gene80760.t1 MTR_5g097180 24.773 440 274 14 47 466 30 432 4.41e-32 127
MS.gene80760.t1 MTR_2g095730 24.590 427 250 15 70 466 108 492 6.06e-31 125
MS.gene80760.t1 MTR_3g034290 28.875 329 202 14 40 361 74 377 1.27e-30 123
MS.gene80760.t1 MTR_2g018650 48.819 127 42 3 320 435 8 122 6.55e-30 113
MS.gene80760.t1 MTR_0003s0560 31.461 267 164 11 40 300 73 326 2.89e-27 112
MS.gene80760.t1 MTR_4g084710 25.393 445 242 18 57 466 45 434 2.28e-26 111
MS.gene80760.t1 MTR_2g095710 22.604 407 270 14 71 466 106 478 4.19e-21 96.3
MS.gene80760.t1 MTR_0075s0010 24.802 379 203 14 40 410 7 311 2.15e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80760.t1 AT5G09640 52.903 465 201 10 20 471 6 465 1.21e-169 486
MS.gene80760.t1 AT2G22970 53.620 442 177 5 33 471 17 433 2.42e-166 476
MS.gene80760.t1 AT2G23000 52.822 443 186 7 31 471 16 437 1.37e-165 474
MS.gene80760.t1 AT2G23000 52.822 443 186 7 31 471 16 437 1.37e-165 474
MS.gene80760.t1 AT2G23010 52.088 455 196 6 19 471 3 437 1.36e-164 472
MS.gene80760.t1 AT2G23010 52.088 455 196 6 19 471 3 437 1.66e-164 471
MS.gene80760.t1 AT2G22980 52.252 444 178 8 32 471 17 430 1.00e-163 469
MS.gene80760.t1 AT2G22920 53.273 443 177 7 30 467 14 431 4.31e-163 468
MS.gene80760.t1 AT1G33540 52.154 441 202 7 38 471 26 464 5.35e-162 466
MS.gene80760.t1 AT2G22990 49.887 441 196 7 33 471 16 433 9.31e-159 457
MS.gene80760.t1 AT3G12203 52.174 437 180 7 38 471 6 416 2.55e-158 455
MS.gene80760.t1 AT3G12203 50.545 459 198 7 16 471 5 437 3.21e-158 456
MS.gene80760.t1 AT3G10450 51.259 437 185 7 38 471 26 437 3.74e-158 455
MS.gene80760.t1 AT1G73270 52.262 442 182 8 33 471 26 441 9.34e-158 455
MS.gene80760.t1 AT1G73270 52.262 442 182 8 33 471 26 441 1.03e-157 454
MS.gene80760.t1 AT1G73300 50.337 445 186 8 33 471 26 441 1.65e-156 451
MS.gene80760.t1 AT1G73300 50.337 445 186 8 33 471 26 441 1.65e-156 451
MS.gene80760.t1 AT1G73280 49.339 454 202 6 21 471 13 441 3.46e-156 451
MS.gene80760.t1 AT2G22970 53.237 417 168 4 33 446 17 409 9.65e-156 448
MS.gene80760.t1 AT2G22970 53.110 418 169 4 33 447 17 410 1.90e-155 449
MS.gene80760.t1 AT3G12240 51.147 436 185 7 39 471 26 436 2.17e-155 448
MS.gene80760.t1 AT5G36180 50.787 445 184 9 33 471 26 441 6.92e-155 447
MS.gene80760.t1 AT1G73290 51.242 443 183 9 33 471 25 438 6.97e-155 447
MS.gene80760.t1 AT1G73310 50.679 442 189 7 33 471 26 441 2.14e-153 443
MS.gene80760.t1 AT3G12230 50.229 436 189 7 39 471 25 435 9.13e-153 442
MS.gene80760.t1 AT2G22980 51.551 419 170 7 32 446 17 406 1.22e-152 440
MS.gene80760.t1 AT1G33540 51.667 420 194 7 59 471 4 421 1.67e-152 441
MS.gene80760.t1 AT2G22990 48.980 441 191 8 33 471 16 424 1.91e-152 440
MS.gene80760.t1 AT2G22980 51.435 418 170 7 32 445 17 405 1.56e-151 438
MS.gene80760.t1 AT3G12220 51.157 432 183 7 39 467 25 431 6.46e-151 437
MS.gene80760.t1 AT2G22990 48.926 419 190 6 33 449 16 412 1.97e-147 429
MS.gene80760.t1 AT2G22990 48.916 415 188 6 33 445 16 408 1.03e-146 426
MS.gene80760.t1 AT3G10450 50.485 412 177 6 38 446 26 413 5.16e-146 424
MS.gene80760.t1 AT3G10450 50.000 416 180 7 59 471 4 394 5.22e-146 423
MS.gene80760.t1 AT2G22920 50.985 406 170 6 30 430 14 395 8.83e-141 410
MS.gene80760.t1 AT3G12203 50.743 404 171 6 71 471 1 379 1.70e-140 408
MS.gene80760.t1 AT3G12220 50.000 412 178 7 59 467 15 401 9.48e-139 405
MS.gene80760.t1 AT1G73290 50.249 402 168 8 33 430 25 398 3.72e-135 395
MS.gene80760.t1 AT1G73310 49.383 405 177 6 33 434 26 405 8.48e-135 395
MS.gene80760.t1 AT3G10450 49.105 391 172 6 59 446 4 370 1.11e-133 390
MS.gene80760.t1 AT5G36180 49.030 361 151 7 117 471 6 339 9.02e-115 341
MS.gene80760.t1 AT5G36180 49.030 361 151 7 117 471 6 339 9.02e-115 341
MS.gene80760.t1 AT1G73280 48.324 358 158 5 117 471 6 339 1.15e-114 341
MS.gene80760.t1 AT2G22980 48.767 365 152 8 32 390 17 352 4.21e-114 340
MS.gene80760.t1 AT2G22990 47.941 340 154 5 134 471 1 319 1.97e-112 334
MS.gene80760.t1 AT2G22990 47.941 340 154 5 134 471 1 319 2.03e-112 334
MS.gene80760.t1 AT1G73280 46.113 373 174 5 21 390 13 361 1.71e-111 334
MS.gene80760.t1 AT4G12910 36.327 490 263 10 18 466 11 492 6.07e-109 332
MS.gene80760.t1 AT1G73280 47.929 338 149 5 137 471 1 314 1.28e-106 319
MS.gene80760.t1 AT2G22970 50.311 322 135 3 32 352 16 313 3.56e-106 318
MS.gene80760.t1 AT5G36180 47.801 341 146 6 112 446 1 315 1.66e-105 317
MS.gene80760.t1 AT2G22920 50.154 325 136 5 30 352 14 314 7.43e-104 312
MS.gene80760.t1 AT2G22980 48.265 317 132 6 134 446 1 289 1.39e-101 306
MS.gene80760.t1 AT3G25420 36.638 464 254 11 41 467 30 490 2.30e-101 312
MS.gene80760.t1 AT5G36180 46.296 324 142 6 112 429 1 298 1.29e-93 287
MS.gene80760.t1 AT4G12910 35.541 453 243 10 18 429 11 455 1.60e-92 288
MS.gene80760.t1 AT1G73310 45.231 325 152 4 113 434 2 303 4.01e-92 283
MS.gene80760.t1 AT1G73290 52.593 270 116 6 33 297 25 287 4.02e-92 282
MS.gene80760.t1 AT2G22920 51.460 274 105 5 198 467 3 252 1.25e-91 279
MS.gene80760.t1 AT3G12220 53.306 242 106 4 39 278 25 261 1.74e-81 257
MS.gene80760.t1 AT3G12220 54.676 139 61 2 330 467 242 379 8.56e-45 161
MS.gene80760.t1 AT4G30810 30.983 468 297 13 15 471 9 461 4.69e-62 209
MS.gene80760.t1 AT5G08260 30.909 495 286 17 10 471 4 475 7.37e-62 209
MS.gene80760.t1 AT3G52000 31.126 453 252 17 41 471 64 478 2.92e-59 202
MS.gene80760.t1 AT4G15100 30.562 445 286 13 41 471 45 480 4.56e-59 202
MS.gene80760.t1 AT3G52010 29.654 462 287 12 24 471 46 483 1.11e-58 201
MS.gene80760.t1 AT3G52020 31.757 444 264 13 41 471 80 497 1.44e-58 201
MS.gene80760.t1 AT2G22960 59.712 139 54 2 334 471 47 184 6.25e-57 187
MS.gene80760.t1 AT2G05850 30.377 451 263 16 41 471 64 483 4.45e-55 191
MS.gene80760.t1 AT5G23210 28.810 479 289 15 24 471 37 494 8.62e-55 191
MS.gene80760.t1 AT1G61130 29.590 463 289 14 25 470 16 458 9.40e-55 190
MS.gene80760.t1 AT4G30610 30.269 446 281 17 40 471 32 461 4.58e-54 188
MS.gene80760.t1 AT3G17180 30.538 465 277 17 33 471 30 474 2.44e-53 186
MS.gene80760.t1 AT2G35780 29.638 442 281 16 40 471 29 450 9.42e-53 184
MS.gene80760.t1 AT3G63470 28.767 438 282 14 41 471 82 496 1.05e-51 182
MS.gene80760.t1 AT3G07990 29.345 443 283 14 40 471 33 456 1.07e-51 181
MS.gene80760.t1 AT1G11080 30.176 454 276 15 41 470 51 487 4.74e-51 181
MS.gene80760.t1 AT1G11080 30.176 454 276 15 41 470 51 487 5.72e-51 180
MS.gene80760.t1 AT3G02110 30.283 459 278 19 35 471 32 470 6.59e-51 180
MS.gene80760.t1 AT1G43780 29.844 449 270 19 41 466 38 464 4.48e-49 175
MS.gene80760.t1 AT2G33530 29.590 463 277 18 32 471 25 461 6.59e-49 174
MS.gene80760.t1 AT2G24010 29.545 440 281 15 41 471 31 450 1.28e-48 173
MS.gene80760.t1 AT2G12480 27.623 467 298 16 19 467 8 452 1.32e-48 173
MS.gene80760.t1 AT2G35770 28.511 470 301 16 12 468 7 454 4.52e-48 172
MS.gene80760.t1 AT2G24000 27.626 438 296 11 40 467 30 456 1.16e-47 171
MS.gene80760.t1 AT1G28110 27.876 452 287 13 37 471 28 457 4.25e-47 169
MS.gene80760.t1 AT1G28110 27.876 452 287 13 37 471 28 457 4.25e-47 169
MS.gene80760.t1 AT5G23210 28.276 435 261 14 24 427 37 451 2.33e-44 162
MS.gene80760.t1 AT2G12480 26.724 464 282 15 19 467 8 428 3.60e-44 161
MS.gene80760.t1 AT2G24010 28.352 455 282 16 41 471 31 465 1.76e-43 159
MS.gene80760.t1 AT2G12480 26.566 463 282 14 19 467 8 426 2.75e-43 158
MS.gene80760.t1 AT5G42240 27.617 449 281 17 41 467 33 459 2.24e-42 157
MS.gene80760.t1 AT5G42230 28.953 449 273 19 41 466 29 454 2.81e-42 156
MS.gene80760.t1 AT5G42230 28.953 449 273 19 41 466 29 454 2.81e-42 156
MS.gene80760.t1 AT3G17180 29.953 424 251 17 33 430 30 433 8.77e-42 154
MS.gene80760.t1 AT2G12480 26.509 464 282 15 19 467 8 427 1.47e-41 154
MS.gene80760.t1 AT5G23210 27.139 409 250 12 94 471 8 399 7.37e-40 148
MS.gene80760.t1 AT3G45010 26.847 406 264 10 70 466 115 496 7.97e-40 150
MS.gene80760.t1 AT2G24010 27.615 478 273 19 41 467 2 457 2.72e-39 148
MS.gene80760.t1 AT5G22980 29.268 410 247 16 70 466 112 491 3.74e-39 148
MS.gene80760.t1 AT5G23210 26.961 408 250 12 95 471 8 398 5.08e-39 146
MS.gene80760.t1 AT3G10410 28.261 414 248 17 71 468 114 494 1.09e-35 139
MS.gene80760.t1 AT5G23210 26.099 364 222 11 95 427 8 355 1.03e-28 117
MS.gene80760.t1 AT1G15000 25.503 447 255 18 42 466 31 421 3.40e-25 108
MS.gene80760.t1 AT3G56540 36.306 157 91 4 41 195 80 229 7.36e-25 103
MS.gene80760.t1 AT5G22960 34.940 166 81 4 56 220 35 174 4.81e-23 96.7
MS.gene80760.t1 AT2G24010 30.962 239 138 10 41 259 2 233 1.02e-22 99.8
MS.gene80760.t1 AT2G24000 24.911 281 199 6 194 467 118 393 1.95e-20 93.6

Find 100 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGATCTGTTCCACATTT+TGG 0.131981 4.4:-80403167 MS.gene80760:CDS
TCTTATCTTCAGTGCCTTTC+AGG 0.161882 4.4:-80403190 MS.gene80760:intron
TCTTAAACACAACTCATTTC+TGG 0.162375 4.4:+80403521 None:intergenic
ATTCCCATTCCATGAGTAAA+TGG 0.201662 4.4:+80403721 None:intergenic
CCTCTTATGCTTTGGTTAAC+TGG 0.223979 4.4:-80406032 MS.gene80760:CDS
TTTCTCTGTGTGTTGTTATA+GGG 0.242077 4.4:+80403758 None:intergenic
TGCAGGGAACCATAGGAAAA+TGG 0.252094 4.4:-80402696 MS.gene80760:intron
TTAACTCATATTGAAGCTTA+TGG 0.264666 4.4:-80406626 MS.gene80760:CDS
TCTGGACTTGCCTATCAAAT+AGG 0.272453 4.4:-80405987 MS.gene80760:intron
GATACCGCTCTTTGATTTAC+AGG 0.281285 4.4:-80402597 MS.gene80760:intron
CTTAATTAATTGCAGGGTTC+AGG 0.282365 4.4:-80400821 MS.gene80760:intron
TTGAAAATTACCTATTTGAT+AGG 0.283259 4.4:+80405977 None:intergenic
TTTGATAGGTACGTGGGGTT+AGG 0.283274 4.4:-80406122 MS.gene80760:intron
TGATTAACAGGAAATGAAAA+AGG 0.320755 4.4:-80403942 MS.gene80760:intron
TTGATAGGTACGTGGGGTTA+GGG 0.325028 4.4:-80406121 MS.gene80760:intron
TGTCTACTCAAGCTTGGATT+AGG 0.336911 4.4:-80401721 MS.gene80760:CDS
CGGTTTACTTGCCTCATCAT+AGG 0.341096 4.4:+80403488 None:intergenic
TGGAGGCCATGGTTTGTAAA+TGG 0.346299 4.4:-80401671 MS.gene80760:CDS
TCCTAAGAAATTGAAGAGTA+TGG 0.358041 4.4:+80404729 None:intergenic
TCAAAGGTTGAACAACTTCC+TGG 0.360669 4.4:-80406602 MS.gene80760:CDS
ACCATACTCTTCAATTTCTT+AGG 0.361295 4.4:-80404730 MS.gene80760:CDS
AATTACTTGGCAGTTTAGTT+CGG 0.364117 4.4:+80403057 None:intergenic
TCCTTGATTTCAAATGCAAT+TGG 0.380583 4.4:+80405133 None:intergenic
ATCTTTGACTCAGGAGTTGA+AGG 0.381454 4.4:-80403107 MS.gene80760:CDS
ATTACTTGGCAGTTTAGTTC+GGG 0.382908 4.4:+80403058 None:intergenic
TCCAATTGCATTTGAAATCA+AGG 0.383040 4.4:-80405134 MS.gene80760:CDS
ATTTGAAATTTCTTGAAGAA+TGG 0.384481 4.4:+80404244 None:intergenic
CGACGGGAGCGTGCCTAGTT+TGG 0.389176 4.4:-80405107 MS.gene80760:CDS
GAAATTTCTTGAAGAATGGC+TGG 0.393437 4.4:+80404248 None:intergenic
CTTTCATGTCTACTCAAGCT+TGG 0.398114 4.4:-80401727 MS.gene80760:CDS
CAGCGATGTTCTTACCTTCA+CGG 0.403156 4.4:+80400951 None:intergenic
AGAAAGATCCTCTTATGCTT+TGG 0.405600 4.4:-80406040 MS.gene80760:CDS
CTTTGGTTAACTGGTGGTCC+TGG 0.408919 4.4:-80406023 MS.gene80760:CDS
GTAGATTTGCCACTTGGAAC+TGG 0.409499 4.4:-80404806 MS.gene80760:CDS
TCACGGATCATCGGAGCGAC+TGG 0.415782 4.4:-80404763 MS.gene80760:CDS
CCAGTTAACCAAAGCATAAG+AGG 0.430684 4.4:+80406032 None:intergenic
ACTACTCCGTTGTAGATGAT+TGG 0.442839 4.4:-80401691 MS.gene80760:CDS
ATCCCATTTACTCATGGAAT+GGG 0.451576 4.4:-80403724 MS.gene80760:CDS
ATTCTTCAAGAAATTTCAAA+TGG 0.469672 4.4:-80404242 MS.gene80760:intron
GCAGGGAACCATAGGAAAAT+GGG 0.472238 4.4:-80402695 MS.gene80760:intron
TATCAAATCCCATTTACTCA+TGG 0.476162 4.4:-80403730 MS.gene80760:CDS
GACCCAGTTTCAAGTTCAAA+AGG 0.476471 4.4:+80406563 None:intergenic
TCTTGAAGAATGGCTGGGAC+AGG 0.476940 4.4:+80404254 None:intergenic
CTTTCAAATGAATTCTACAT+TGG 0.479014 4.4:-80404299 MS.gene80760:CDS
TTCCCATTCCATGAGTAAAT+GGG 0.481220 4.4:+80403722 None:intergenic
TGTCAGATACTACTAGCTCT+TGG 0.488028 4.4:-80406668 MS.gene80760:CDS
TGTGGCCTCAAGACCAAACT+AGG 0.493874 4.4:+80405094 None:intergenic
CCTTGAGATTTATCAATGGT+TGG 0.494155 4.4:+80403916 None:intergenic
AATCCCATTTACTCATGGAA+TGG 0.496948 4.4:-80403725 MS.gene80760:CDS
TACTCTTCAATTTCTTAGGA+AGG 0.501252 4.4:-80404726 MS.gene80760:intron
TGAAGTGAATTATGAGAAGG+AGG 0.504769 4.4:+80406701 None:intergenic
TGAGCATTGCAGGGAACCAT+AGG 0.519287 4.4:-80402703 MS.gene80760:intron
CATATATTTGATAGGTACGT+GGG 0.520465 4.4:-80406128 MS.gene80760:intron
TTGTAGATGATTGGAGGCCA+TGG 0.522207 4.4:-80401682 MS.gene80760:CDS
GAAACCTTGAGATTTATCAA+TGG 0.525518 4.4:+80403912 None:intergenic
GTGGAGAAGATCTTTGACTC+AGG 0.525567 4.4:-80403116 MS.gene80760:CDS
GGTAGTGGCCCTTGAAAACC+AGG 0.530817 4.4:+80406584 None:intergenic
AACATGGCAAAACATTGCTC+AGG 0.535431 4.4:+80400776 None:intergenic
CTTGAGATTCTGATTTACAA+AGG 0.544758 4.4:+80400731 None:intergenic
CCAACCATTGATAAATCTCA+AGG 0.544985 4.4:-80403916 MS.gene80760:intron
TGGTCTTGAGGCCACAGTCA+TGG 0.546927 4.4:-80405087 MS.gene80760:CDS
ATTGGAGCTGATTCATACTC+AGG 0.549342 4.4:-80404281 MS.gene80760:CDS
CTTATGCTTTGGTTAACTGG+TGG 0.549628 4.4:-80406029 MS.gene80760:CDS
TTGTAAATGGTCAAGTGGGA+GGG 0.549632 4.4:-80401658 MS.gene80760:intron
GCGTGCCTAGTTTGGTCTTG+AGG 0.549911 4.4:-80405099 MS.gene80760:CDS
TACTTGCCTCATCATAGGAT+CGG 0.555204 4.4:+80403493 None:intergenic
TATTGAAGCTTATGGCTCAA+AGG 0.556674 4.4:-80406618 MS.gene80760:CDS
GTTTCAAGTTCAAAAGGTAG+TGG 0.558447 4.4:+80406569 None:intergenic
TTGAAATCAAGGAGTACGAC+GGG 0.564117 4.4:-80405123 MS.gene80760:CDS
ACTCCGTTGTAGATGATTGG+AGG 0.567476 4.4:-80401688 MS.gene80760:CDS
CACAAAAGCGATCCAAAATG+TGG 0.571488 4.4:+80403155 None:intergenic
TAGTGAAGTGAATTATGAGA+AGG 0.571718 4.4:+80406698 None:intergenic
ACTTGACCATTTACAAACCA+TGG 0.575649 4.4:+80401665 None:intergenic
AAATTTCTTGAAGAATGGCT+GGG 0.584151 4.4:+80404249 None:intergenic
TGATAGGTACGTGGGGTTAG+GGG 0.585717 4.4:-80406120 MS.gene80760:intron
TAACAATGAGCGTGTTCGCA+AGG 0.589607 4.4:-80402921 MS.gene80760:CDS
CATTGCTCAGGAGTGTACTC+AGG 0.590734 4.4:+80400788 None:intergenic
CAAGGCACTGCATATTCGAG+AGG 0.592389 4.4:-80402903 MS.gene80760:intron
ATGGTTTGTAAATGGTCAAG+TGG 0.593420 4.4:-80401663 MS.gene80760:CDS
GTGACGATGATCCGCGTCTG+TGG 0.593713 4.4:-80403135 MS.gene80760:CDS
TTTGTAAATGGTCAAGTGGG+AGG 0.596202 4.4:-80401659 MS.gene80760:CDS
CAAGCTTGAGTAGACATGAA+AGG 0.607068 4.4:+80401728 None:intergenic
AGATATCCACCTAGTGAACA+TGG 0.610797 4.4:+80400760 None:intergenic
AGCATAAGAGGATCTTTCTG+AGG 0.612797 4.4:+80406044 None:intergenic
TCCTTTCATGCAGATACACA+AGG 0.615114 4.4:-80401002 MS.gene80760:intron
TCATATATTTGATAGGTACG+TGG 0.623494 4.4:-80406129 MS.gene80760:intron
TGGTTTGTAAATGGTCAAGT+GGG 0.635753 4.4:-80401662 MS.gene80760:CDS
GGAACAGATCAAGTCCTGAA+AGG 0.642344 4.4:+80403176 None:intergenic
CATGAAACTCAAAGCTACCA+AGG 0.648314 4.4:+80402638 None:intergenic
AACACCTTTGTCCATGACTG+TGG 0.650204 4.4:+80405076 None:intergenic
TTCACCTGTAAATCAAAGAG+CGG 0.660021 4.4:+80402593 None:intergenic
GAGGCCACAGTCATGGACAA+AGG 0.660835 4.4:-80405080 MS.gene80760:intron
AAAGATCTTCTCCACAGACG+CGG 0.666238 4.4:+80403124 None:intergenic
AGATCTCCGATCCTATGATG+AGG 0.667078 4.4:-80403499 MS.gene80760:intron
GCTTGCAAAGATGAACATGA+TGG 0.680214 4.4:-80406726 None:intergenic
CATTTCTGATGAACTCTACG+CGG 0.688710 4.4:-80403698 MS.gene80760:intron
TATGAGAAACCAGTTCCAAG+TGG 0.692436 4.4:+80404797 None:intergenic
TGGCCTCCAATCATCTACAA+CGG 0.700190 4.4:+80401685 None:intergenic
ATATATTTGATAGGTACGTG+GGG 0.700917 4.4:-80406127 MS.gene80760:intron
TTTGAAATCAAGGAGTACGA+CGG 0.702574 4.4:-80405124 MS.gene80760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTAATTGTCTATAA+AGG - chr4.4:80406587-80406606 MS.gene80760:CDS 10.0%
!! AATATTTAATTGTCTATAAA+GGG - chr4.4:80406588-80406607 MS.gene80760:CDS 10.0%
!! AGAAAAAAAGAAAATAATAA+GGG - chr4.4:80404150-80404169 MS.gene80760:intron 10.0%
!! TAGAAAAAAAGAAAATAATA+AGG - chr4.4:80404149-80404168 MS.gene80760:intron 10.0%
!! TTATAATTATAATTACAATG+AGG - chr4.4:80403304-80403323 MS.gene80760:intron 10.0%
!!! TTTTTTTTCTTTTCTATTTT+AGG - chr4.4:80400961-80400980 MS.gene80760:intron 10.0%
!! AAACTAATTATTGGAAAATT+TGG - chr4.4:80406093-80406112 MS.gene80760:CDS 15.0%
!! AAATCAATGTTGAATTATTT+AGG + chr4.4:80402418-80402437 None:intergenic 15.0%
!! AAATTATAGAAAAATAGGAT+TGG + chr4.4:80406370-80406389 None:intergenic 15.0%
!! AATATTAAACAAAGAGAAAT+AGG + chr4.4:80403035-80403054 None:intergenic 15.0%
!! ATAATAGGTATAGATAAAAT+TGG + chr4.4:80404006-80404025 None:intergenic 15.0%
!! ATATAAATCATAGTTCTTAT+TGG + chr4.4:80402470-80402489 None:intergenic 15.0%
!! TAAGTTATGAAAAAATTACT+TGG + chr4.4:80404420-80404439 None:intergenic 15.0%
!! TTTAGTATCATCTTAATAAT+AGG + chr4.4:80404021-80404040 None:intergenic 15.0%
!!! AAAGACATTTTACAATTTTT+GGG + chr4.4:80405904-80405923 None:intergenic 15.0%
!!! CTTTGTTTAATATTTACTTT+AGG - chr4.4:80403041-80403060 MS.gene80760:intron 15.0%
!!! TATTTTCATGATTTCATTAT+TGG - chr4.4:80402572-80402591 MS.gene80760:intron 15.0%
!! AATGCATATAACAAGATAAA+TGG + chr4.4:80403635-80403654 None:intergenic 20.0%
!! AATTGTGCAAAACTAATTAT+TGG - chr4.4:80406084-80406103 MS.gene80760:CDS 20.0%
!! AGAAAAACACTACATATATA+TGG + chr4.4:80404943-80404962 None:intergenic 20.0%
!! ATAATCAATTTATTAGAGTG+AGG + chr4.4:80403362-80403381 None:intergenic 20.0%
!! ATCATCAATTGAATGTTAAT+AGG - chr4.4:80402304-80402323 MS.gene80760:intron 20.0%
!! ATTCTTCAAGAAATTTCAAA+TGG - chr4.4:80403219-80403238 MS.gene80760:intron 20.0%
!! GAAATAACAGTTTAACAATA+TGG + chr4.4:80404250-80404269 None:intergenic 20.0%
!! TAATCAATTTATTAGAGTGA+GGG + chr4.4:80403361-80403380 None:intergenic 20.0%
!! TCCAAAATAGATATACATTA+TGG + chr4.4:80401919-80401938 None:intergenic 20.0%
!! TTCTTATGTTGAATCATAAT+TGG - chr4.4:80404622-80404641 MS.gene80760:intron 20.0%
!! TTGAAAATTACCTATTTGAT+AGG + chr4.4:80401487-80401506 None:intergenic 20.0%
!! TTTAAGAATAACACTCAATT+TGG - chr4.4:80406562-80406581 MS.gene80760:intron 20.0%
!!! ACAGTTTGTTAATACATAAT+TGG - chr4.4:80401541-80401560 MS.gene80760:intron 20.0%
!!! ACCATAATGTATATCTATTT+TGG - chr4.4:80401915-80401934 MS.gene80760:intron 20.0%
!!! ATTTGAAATTTCTTGAAGAA+TGG + chr4.4:80403220-80403239 None:intergenic 20.0%
!!! ATTTTTGCTTAATTAATTGC+AGG - chr4.4:80406633-80406652 MS.gene80760:CDS 20.0%
!!! GAAAGACATTTTACAATTTT+TGG + chr4.4:80405905-80405924 None:intergenic 20.0%
!!! TAGTAATGTTAATGATCTTT+TGG - chr4.4:80402610-80402629 MS.gene80760:CDS 20.0%
!!! TATATATGTAGTGTTTTTCT+TGG - chr4.4:80404943-80404962 MS.gene80760:intron 20.0%
!!! TGATGATATGTTTTACTTAA+TGG - chr4.4:80403850-80403869 MS.gene80760:intron 20.0%
!!! TGTCTAATTCTAAAAAATGA+AGG + chr4.4:80405875-80405894 None:intergenic 20.0%
!!! TTAAGATGATACTAAAGTTT+TGG - chr4.4:80404025-80404044 MS.gene80760:intron 20.0%
!!! TTTTTGCTTAATTAATTGCA+GGG - chr4.4:80406634-80406653 MS.gene80760:CDS 20.0%
! AAAATGCTCAATATTTCAGA+TGG - chr4.4:80403253-80403272 MS.gene80760:intron 25.0%
! AAATCAATTGTTGATGTTAC+CGG + chr4.4:80405549-80405568 None:intergenic 25.0%
! AACAGAAGAAGTTAACAAAA+AGG + chr4.4:80405935-80405954 None:intergenic 25.0%
! AAGATCATTAACATTACTAC+CGG + chr4.4:80402609-80402628 None:intergenic 25.0%
! AATCAATTTATTAGAGTGAG+GGG + chr4.4:80403360-80403379 None:intergenic 25.0%
! ACATCAATTTCAGTTCATTA+GGG - chr4.4:80406007-80406026 MS.gene80760:CDS 25.0%
! ACCTAATAAAAGAAAAGTGA+TGG + chr4.4:80402076-80402095 None:intergenic 25.0%
! AGGTATAGATAAAATTGGAA+TGG + chr4.4:80404001-80404020 None:intergenic 25.0%
! AGTGAATTTGTAACAGAAAA+TGG + chr4.4:80400940-80400959 None:intergenic 25.0%
! ATTTGTAACAGAAAATGGAA+TGG + chr4.4:80400935-80400954 None:intergenic 25.0%
! CAATTATCTGTATTGTATAG+TGG - chr4.4:80403118-80403137 MS.gene80760:CDS 25.0%
! CATGTAAATCTAAGCAAAAA+AGG - chr4.4:80404842-80404861 MS.gene80760:intron 25.0%
! CTTTCAAATGAATTCTACAT+TGG - chr4.4:80403162-80403181 MS.gene80760:CDS 25.0%
! GACTAATACTTTGTAATTTC+AGG - chr4.4:80406257-80406276 MS.gene80760:intron 25.0%
! GATACAAAATCTATACTAAC+TGG + chr4.4:80401842-80401861 None:intergenic 25.0%
! TAACAAGATAAATGGAACAA+AGG + chr4.4:80403627-80403646 None:intergenic 25.0%
! TAAGTTCATTATGCTAACTA+GGG - chr4.4:80402758-80402777 MS.gene80760:intron 25.0%
! TAATGAACTGAAATTGATGT+GGG + chr4.4:80406007-80406026 None:intergenic 25.0%
! TAGATAAAATTGGAATGGAA+CGG + chr4.4:80403996-80404015 None:intergenic 25.0%
! TGATTAACAGGAAATGAAAA+AGG - chr4.4:80403519-80403538 MS.gene80760:CDS 25.0%
! TGTGTGTTCATATATTTGAT+AGG - chr4.4:80401325-80401344 MS.gene80760:intron 25.0%
! TTAACTCATATTGAAGCTTA+TGG - chr4.4:80400835-80400854 MS.gene80760:intron 25.0%
! TTCATGATTTCATTATTGGA+AGG - chr4.4:80402576-80402595 MS.gene80760:intron 25.0%
! TTGATTTAGATTAGGATACA+AGG + chr4.4:80406434-80406453 None:intergenic 25.0%
! TTTCCATTTGTTTGATTAAC+AGG - chr4.4:80403507-80403526 MS.gene80760:CDS 25.0%
! TTTCCTGTTAATCAAACAAA+TGG + chr4.4:80403513-80403532 None:intergenic 25.0%
!! ACTAATTTTCCTAGGAAATT+TGG - chr4.4:80406030-80406049 MS.gene80760:CDS 25.0%
!! ACTGTTGATAAGAAAATCAA+TGG - chr4.4:80405484-80405503 MS.gene80760:intron 25.0%
!! CACAATGATGAAACATTTTA+TGG + chr4.4:80404460-80404479 None:intergenic 25.0%
!! CTAATTTTCCTAGGAAATTT+GGG - chr4.4:80406031-80406050 MS.gene80760:CDS 25.0%
!! GTTAATTTTTCTCATGATGA+AGG - chr4.4:80402943-80402962 MS.gene80760:CDS 25.0%
!! TATGAAATTTAGGGTTCTTA+GGG + chr4.4:80406119-80406138 None:intergenic 25.0%
!!! CTTTTTGAAACTGTCTAAAA+AGG + chr4.4:80401690-80401709 None:intergenic 25.0%
!!! GGAAATTGTTGATTTAGATT+AGG + chr4.4:80406442-80406461 None:intergenic 25.0%
!!! GTTCGTATTGATTAGAAAAT+TGG + chr4.4:80401897-80401916 None:intergenic 25.0%
!!! TAGTATAAACTGACTTGATT+CGG - chr4.4:80403423-80403442 MS.gene80760:intron 25.0%
!!! TCCATCACTTTTCTTTTATT+AGG - chr4.4:80402072-80402091 MS.gene80760:intron 25.0%
!!! TCTGAAATATTGAGCATTTT+AGG + chr4.4:80403253-80403272 None:intergenic 25.0%
AAAGAAAAAGTCTGAAGATG+TGG + chr4.4:80402820-80402839 None:intergenic 30.0%
AAAGAAGTCTCAACAACTAA+TGG - chr4.4:80404705-80404724 MS.gene80760:intron 30.0%
AAATTTCTTGAAGAATGGCT+GGG + chr4.4:80403215-80403234 None:intergenic 30.0%
AACAAATGATTGAGTTCAAG+CGG + chr4.4:80401243-80401262 None:intergenic 30.0%
AATCAATTGTTGATGTTACC+GGG + chr4.4:80405548-80405567 None:intergenic 30.0%
AATGGTCTACTGTTATCTAT+TGG - chr4.4:80403868-80403887 MS.gene80760:intron 30.0%
AATTACTTGGCAGTTTAGTT+CGG + chr4.4:80404407-80404426 None:intergenic 30.0%
ACAAGAAAATAGCCAAATCA+TGG + chr4.4:80402208-80402227 None:intergenic 30.0%
ACCATACTCTTCAATTTCTT+AGG - chr4.4:80402731-80402750 MS.gene80760:intron 30.0%
ATATATTTGATAGGTACGTG+GGG - chr4.4:80401334-80401353 MS.gene80760:intron 30.0%
ATATCATCATTGTAACCAAC+AGG + chr4.4:80403839-80403858 None:intergenic 30.0%
ATCCCTGAAAATGTTTAAAC+CGG + chr4.4:80403670-80403689 None:intergenic 30.0%
ATGATGTGTAATCAATGTGA+AGG - chr4.4:80406166-80406185 MS.gene80760:intron 30.0%
ATTATTGGAAGGTGATTTAC+CGG - chr4.4:80402587-80402606 MS.gene80760:intron 30.0%
CACATCAATTTCAGTTCATT+AGG - chr4.4:80406006-80406025 MS.gene80760:CDS 30.0%
CATATATTTGATAGGTACGT+GGG - chr4.4:80401333-80401352 MS.gene80760:intron 30.0%
CTAAGAACCCTAAATTTCAT+AGG - chr4.4:80406118-80406137 MS.gene80760:intron 30.0%
CTAATGAACTGAAATTGATG+TGG + chr4.4:80406008-80406027 None:intergenic 30.0%
CTCATATGCAAAAAATGTCA+CGG - chr4.4:80402681-80402700 MS.gene80760:CDS 30.0%
GAAACCTTGAGATTTATCAA+TGG + chr4.4:80403552-80403571 None:intergenic 30.0%
GGGATACAACATAATAAATC+AGG + chr4.4:80401961-80401980 None:intergenic 30.0%
GTAAGTTCATTATGCTAACT+AGG - chr4.4:80402757-80402776 MS.gene80760:intron 30.0%
TAAAATTACTATGCATGTCC+CGG - chr4.4:80405527-80405546 MS.gene80760:intron 30.0%
TACTCTTCAATTTCTTAGGA+AGG - chr4.4:80402735-80402754 MS.gene80760:intron 30.0%
TACTTCGCCTATGAAATTTA+GGG + chr4.4:80406128-80406147 None:intergenic 30.0%
TAGTGAAGTGAATTATGAGA+AGG + chr4.4:80400766-80400785 None:intergenic 30.0%
TATCAAATCCCATTTACTCA+TGG - chr4.4:80403731-80403750 MS.gene80760:CDS 30.0%
TCATATATTTGATAGGTACG+TGG - chr4.4:80401332-80401351 MS.gene80760:intron 30.0%
TCCTAAGAAATTGAAGAGTA+TGG + chr4.4:80402735-80402754 None:intergenic 30.0%
TCCTTGATTTCAAATGCAAT+TGG + chr4.4:80402331-80402350 None:intergenic 30.0%
TCGTAAATGAAGATCATAGT+CGG + chr4.4:80402969-80402988 None:intergenic 30.0%
TCTTAAACACAACTCATTTC+TGG + chr4.4:80403943-80403962 None:intergenic 30.0%
TGATCTTCATTTACGAAAAC+TGG - chr4.4:80402973-80402992 MS.gene80760:intron 30.0%
TGATGTGTAATCAATGTGAA+GGG - chr4.4:80406167-80406186 MS.gene80760:intron 30.0%
TGATTATTTGCATTCTCCTA+TGG - chr4.4:80403375-80403394 MS.gene80760:intron 30.0%
TGTAAGCATGTTAATCATGA+TGG - chr4.4:80404205-80404224 MS.gene80760:intron 30.0%
TTGGATATGTATAACACACA+TGG - chr4.4:80401560-80401579 MS.gene80760:intron 30.0%
TTGTTAACTTCTTCTGTTAG+AGG - chr4.4:80405937-80405956 MS.gene80760:intron 30.0%
! AAGGTGTCTTATTATGTTCT+AGG + chr4.4:80406415-80406434 None:intergenic 30.0%
! ATGACAATTGATGTGTTGTT+TGG - chr4.4:80405685-80405704 MS.gene80760:intron 30.0%
! ATTCATTTTGCAGTGAAATG+TGG - chr4.4:80401868-80401887 MS.gene80760:intron 30.0%
! ATTTTTGTAGATTTGCCACT+TGG - chr4.4:80402649-80402668 MS.gene80760:CDS 30.0%
! CAGTTTCAAAAAGTGTACTA+AGG - chr4.4:80401697-80401716 MS.gene80760:CDS 30.0%
! CTATGAAATTTAGGGTTCTT+AGG + chr4.4:80406120-80406139 None:intergenic 30.0%
! GAATGAGAAGAACTATTTTG+TGG + chr4.4:80402161-80402180 None:intergenic 30.0%
! GCATAGTAAAAAGTTCTGAT+AGG + chr4.4:80405413-80405432 None:intergenic 30.0%
! TACCTTTTGAACTTGAAACT+GGG - chr4.4:80400896-80400915 MS.gene80760:intron 30.0%
! TAGCTTTCTTGATGACATTA+AGG - chr4.4:80405648-80405667 MS.gene80760:intron 30.0%
! TCCAATTGCATTTGAAATCA+AGG - chr4.4:80402327-80402346 MS.gene80760:intron 30.0%
! TTCATTTTGCAGTGAAATGT+GGG - chr4.4:80401869-80401888 MS.gene80760:intron 30.0%
! TTTCTCTGTGTGTTGTTATA+GGG + chr4.4:80403706-80403725 None:intergenic 30.0%
! TTTTTACCTCAGCACAAAAT+GGG - chr4.4:80404516-80404535 MS.gene80760:intron 30.0%
!! ATGATACTAAAGTTTTGGTG+TGG - chr4.4:80404030-80404049 MS.gene80760:intron 30.0%
!! GACTAAAAAGTGTTTCATGT+AGG - chr4.4:80401168-80401187 MS.gene80760:intron 30.0%
!! TCGAATTTTGAGTCATAGTT+AGG + chr4.4:80403077-80403096 None:intergenic 30.0%
!! TTTGGCTATTTTCTTGTGTT+TGG - chr4.4:80402211-80402230 MS.gene80760:intron 30.0%
!! TTTTCTCTGTGTGTTGTTAT+AGG + chr4.4:80403707-80403726 None:intergenic 30.0%
!!! AAATGAAGGACTATTTTGAC+TGG + chr4.4:80405861-80405880 None:intergenic 30.0%
!!! TTTTTTAAGTCTTTACGCTC+TGG + chr4.4:80403476-80403495 None:intergenic 30.0%
AAAAGTGACCGACTAAACTA+AGG + chr4.4:80402030-80402049 None:intergenic 35.0%
AAAATAGCTAGTAAGCCCTT+AGG + chr4.4:80405209-80405228 None:intergenic 35.0%
AAATGAGAGACTGGTAAAGA+TGG - chr4.4:80404178-80404197 MS.gene80760:intron 35.0%
AATCCCATTTACTCATGGAA+TGG - chr4.4:80403736-80403755 MS.gene80760:CDS 35.0%
ACTCTATGAATGTTGTTGAG+TGG + chr4.4:80402275-80402294 None:intergenic 35.0%
ACTTGACCATTTACAAACCA+TGG + chr4.4:80405799-80405818 None:intergenic 35.0%
AGAAAGATCCTCTTATGCTT+TGG - chr4.4:80401421-80401440 MS.gene80760:intron 35.0%
ATAAAGAATGACACTCCTCA+AGG - chr4.4:80401036-80401055 MS.gene80760:intron 35.0%
ATCCCATTTACTCATGGAAT+GGG - chr4.4:80403737-80403756 MS.gene80760:CDS 35.0%
ATTCCCATTCCATGAGTAAA+TGG + chr4.4:80403743-80403762 None:intergenic 35.0%
CAAAAAATGTCACGGATCAT+CGG - chr4.4:80402689-80402708 MS.gene80760:CDS 35.0%
CAACAGTAGCTACTTAATCA+TGG - chr4.4:80404075-80404094 MS.gene80760:intron 35.0%
CAGATGTTCAATTGTAGATG+TGG - chr4.4:80401752-80401771 MS.gene80760:CDS 35.0%
CATAGTAATGCATAGTTCGT+CGG - chr4.4:80401130-80401149 MS.gene80760:intron 35.0%
CCAACCATTGATAAATCTCA+AGG - chr4.4:80403545-80403564 MS.gene80760:CDS 35.0%
CCTTGAGATTTATCAATGGT+TGG + chr4.4:80403548-80403567 None:intergenic 35.0%
CGGTCAAAACTTCAGAAAAT+TGG + chr4.4:80405286-80405305 None:intergenic 35.0%
CGTGACAAGAAATATGACAA+CGG + chr4.4:80403008-80403027 None:intergenic 35.0%
CTACCTAACCTTAGTTTAGT+CGG - chr4.4:80402019-80402038 MS.gene80760:intron 35.0%
CTACTTCGCCTATGAAATTT+AGG + chr4.4:80406129-80406148 None:intergenic 35.0%
CTTAATTAATTGCAGGGTTC+AGG - chr4.4:80406640-80406659 MS.gene80760:CDS 35.0%
GAAAATGTTTAAACCGGTCT+AGG + chr4.4:80403664-80403683 None:intergenic 35.0%
GAAATTTCTTGAAGAATGGC+TGG + chr4.4:80403216-80403235 None:intergenic 35.0%
GACTTACACAAGAACTAAAG+CGG + chr4.4:80405306-80405325 None:intergenic 35.0%
GTTTCATGTAGGATTCAACT+CGG - chr4.4:80401179-80401198 MS.gene80760:intron 35.0%
TATCATTAGAGACTATGACG+TGG + chr4.4:80406214-80406233 None:intergenic 35.0%
TATGATGACCCAAATTTCCT+AGG + chr4.4:80406042-80406061 None:intergenic 35.0%
TATTGAAGCTTATGGCTCAA+AGG - chr4.4:80400843-80400862 MS.gene80760:intron 35.0%
TCGAGATCATCATAGTCAAT+CGG + chr4.4:80401982-80402001 None:intergenic 35.0%
TCGATGTGATAACCATGATT+TGG - chr4.4:80402193-80402212 MS.gene80760:intron 35.0%
TCTTGCTAAACTAAACCTTG+AGG + chr4.4:80401054-80401073 None:intergenic 35.0%
TGAAGTGAATTATGAGAAGG+AGG + chr4.4:80400763-80400782 None:intergenic 35.0%
TTCACCTGTAAATCAAAGAG+CGG + chr4.4:80404871-80404890 None:intergenic 35.0%
TTCCCATTCCATGAGTAAAT+GGG + chr4.4:80403742-80403761 None:intergenic 35.0%
TTGAGTGGATCAATTTCAGT+AGG + chr4.4:80402260-80402279 None:intergenic 35.0%
TTGGGACATTAGTGTTAGAT+GGG + chr4.4:80405247-80405266 None:intergenic 35.0%
TTTCAAACCATCATCTCTGT+CGG - chr4.4:80403568-80403587 MS.gene80760:intron 35.0%
TTTCATGTAGGATTCAACTC+GGG - chr4.4:80401180-80401199 MS.gene80760:intron 35.0%
TTTGCTTTGCTTATTGCCAT+AGG + chr4.4:80403394-80403413 None:intergenic 35.0%
! AACTATTCTCCATTTTCTCC+TGG + chr4.4:80402903-80402922 None:intergenic 35.0%
! AATGTTTTGCCATGTTCACT+AGG - chr4.4:80406692-80406711 MS.gene80760:CDS 35.0%
! ACTTGATCTGTTCCACATTT+TGG - chr4.4:80404294-80404313 MS.gene80760:CDS 35.0%
! AGTCTATGATTTTTGCGAAC+TGG + chr4.4:80406293-80406312 None:intergenic 35.0%
! ATGGTTTGTAAATGGTCAAG+TGG - chr4.4:80405798-80405817 MS.gene80760:intron 35.0%
! ATTACTTGGCAGTTTAGTTC+GGG + chr4.4:80404406-80404425 None:intergenic 35.0%
! CATTAGGGACTAATTTTCCT+AGG - chr4.4:80406022-80406041 MS.gene80760:CDS 35.0%
! CTACCTTTTGAACTTGAAAC+TGG - chr4.4:80400895-80400914 MS.gene80760:intron 35.0%
! GAACTTTTTACTATGCACTG+TGG - chr4.4:80405417-80405436 MS.gene80760:intron 35.0%
! GTTTTTACCTCAGCACAAAA+TGG - chr4.4:80404515-80404534 MS.gene80760:intron 35.0%
! TGGTTTGTAAATGGTCAAGT+GGG - chr4.4:80405799-80405818 MS.gene80760:intron 35.0%
! TTTGAAATCAAGGAGTACGA+CGG - chr4.4:80402337-80402356 MS.gene80760:intron 35.0%
! TTTTTGCCTATCAGAACAGA+AGG - chr4.4:80405444-80405463 MS.gene80760:intron 35.0%
!! AAAGTTTTGGTGTGGTCTTT+AGG - chr4.4:80404038-80404057 MS.gene80760:intron 35.0%
!! AACAACTTCCTGGTTTTCAA+GGG - chr4.4:80400869-80400888 MS.gene80760:intron 35.0%
!! AAGTCTATTGCACCGTTTTT+CGG - chr4.4:80405016-80405035 MS.gene80760:intron 35.0%
!! ACACACATGGATTGTTTTTC+TGG - chr4.4:80401573-80401592 MS.gene80760:intron 35.0%
!! AGACCGGTTTAAACATTTTC+AGG - chr4.4:80403664-80403683 MS.gene80760:intron 35.0%
!! AGTGAGCATTTTGCTTTAGA+AGG - chr4.4:80404981-80405000 MS.gene80760:intron 35.0%
!! ATTTTCAGGGATATCTGCTA+GGG - chr4.4:80403678-80403697 MS.gene80760:intron 35.0%
!! GACCGGTTTAAACATTTTCA+GGG - chr4.4:80403665-80403684 MS.gene80760:intron 35.0%
!! GATTTTGAGAATGAGATCCT+TGG - chr4.4:80404806-80404825 MS.gene80760:CDS 35.0%
!! GTTTCAAGTTCAAAAGGTAG+TGG + chr4.4:80400895-80400914 None:intergenic 35.0%
!!! ACATAGTTTTGAGCATTGCA+GGG - chr4.4:80404749-80404768 MS.gene80760:CDS 35.0%
!!! ATTTTGCTTTAGAAGGTGGT+CGG - chr4.4:80404988-80405007 MS.gene80760:intron 35.0%
!!! CTAGCTATTTTTTGTGGCTT+TGG - chr4.4:80405218-80405237 MS.gene80760:intron 35.0%
!!! GGCTTACTAGCTATTTTTTG+TGG - chr4.4:80405212-80405231 MS.gene80760:intron 35.0%
!!! TACATAGTTTTGAGCATTGC+AGG - chr4.4:80404748-80404767 MS.gene80760:CDS 35.0%
AACATGGCAAAACATTGCTC+AGG + chr4.4:80406688-80406707 None:intergenic 40.0%
ACTACTCCGTTGTAGATGAT+TGG - chr4.4:80405770-80405789 MS.gene80760:intron 40.0%
ACTTCAGAAAATTGGAGCAG+CGG + chr4.4:80405278-80405297 None:intergenic 40.0%
AGATATCCACCTAGTGAACA+TGG + chr4.4:80406704-80406723 None:intergenic 40.0%
AGCATAAGAGGATCTTTCTG+AGG + chr4.4:80401420-80401439 None:intergenic 40.0%
ATCTTTGACTCAGGAGTTGA+AGG - chr4.4:80404354-80404373 MS.gene80760:intron 40.0%
ATGCATTATGAAGCCTAGAC+CGG - chr4.4:80403648-80403667 MS.gene80760:intron 40.0%
ATGTCTTGTGCATAGAGTTG+CGG + chr4.4:80402869-80402888 None:intergenic 40.0%
ATTGTAGATGTGGCTGCATT+TGG - chr4.4:80401762-80401781 MS.gene80760:intron 40.0%
CAAGCTTGAGTAGACATGAA+AGG + chr4.4:80405736-80405755 None:intergenic 40.0%
CACAAAAGCGATCCAAAATG+TGG + chr4.4:80404309-80404328 None:intergenic 40.0%
CATACATCGTACTTTCCTGT+TGG - chr4.4:80403821-80403840 MS.gene80760:intron 40.0%
CATGAAACTCAAAGCTACCA+AGG + chr4.4:80404826-80404845 None:intergenic 40.0%
CATTTCTGATGAACTCTACG+CGG - chr4.4:80403763-80403782 MS.gene80760:CDS 40.0%
CCAGTTAACCAAAGCATAAG+AGG + chr4.4:80401432-80401451 None:intergenic 40.0%
CCTCTTATGCTTTGGTTAAC+TGG - chr4.4:80401429-80401448 MS.gene80760:intron 40.0%
CGAAGCAATGTGAGATTTCT+TGG - chr4.4:80405146-80405165 MS.gene80760:intron 40.0%
CGAGATCATCATAGTCAATC+GGG + chr4.4:80401981-80402000 None:intergenic 40.0%
CTTATGCTTTGGTTAACTGG+TGG - chr4.4:80401432-80401451 MS.gene80760:intron 40.0%
CTTTCATGTCTACTCAAGCT+TGG - chr4.4:80405734-80405753 MS.gene80760:intron 40.0%
GGAGTGTGTATTCACTTAAC+AGG - chr4.4:80406188-80406207 MS.gene80760:intron 40.0%
GTTGGGACATTAGTGTTAGA+TGG + chr4.4:80405248-80405267 None:intergenic 40.0%
TACTTGCCTCATCATAGGAT+CGG + chr4.4:80403971-80403990 None:intergenic 40.0%
TATGAGAAACCAGTTCCAAG+TGG + chr4.4:80402667-80402686 None:intergenic 40.0%
TCAAAGGTTGAACAACTTCC+TGG - chr4.4:80400859-80400878 MS.gene80760:intron 40.0%
TCCTTGTGTATCTGCATGAA+AGG + chr4.4:80406463-80406482 None:intergenic 40.0%
TCCTTTCATGCAGATACACA+AGG - chr4.4:80406459-80406478 MS.gene80760:intron 40.0%
TCTGGACTTGCCTATCAAAT+AGG - chr4.4:80401474-80401493 MS.gene80760:intron 40.0%
TCTTATCTTCAGTGCCTTTC+AGG - chr4.4:80404271-80404290 MS.gene80760:CDS 40.0%
TGACCGACTAAACTAAGGTT+AGG + chr4.4:80402025-80402044 None:intergenic 40.0%
TGATTCTCGCTCTTCAAAAG+TGG + chr4.4:80405619-80405638 None:intergenic 40.0%
TGGGACATTAGTGTTAGATG+GGG + chr4.4:80405246-80405265 None:intergenic 40.0%
TGTCTACTCAAGCTTGGATT+AGG - chr4.4:80405740-80405759 MS.gene80760:intron 40.0%
TTCATAGGCGAAGTAGTCTA+TGG - chr4.4:80406133-80406152 MS.gene80760:intron 40.0%
TTGTAAATGGTCAAGTGGGA+GGG - chr4.4:80405803-80405822 MS.gene80760:intron 40.0%
TTTGTAAATGGTCAAGTGGG+AGG - chr4.4:80405802-80405821 MS.gene80760:intron 40.0%
TTTGTGAGTCGAATTACGAG+AGG - chr4.4:80401651-80401670 MS.gene80760:intron 40.0%
! AATGACTTTTGCAACCGTGA+AGG - chr4.4:80406496-80406515 MS.gene80760:intron 40.0%
! ACAACGTTCCCATTTTCCTA+TGG + chr4.4:80404777-80404796 None:intergenic 40.0%
! ATTGGAGCTGATTCATACTC+AGG - chr4.4:80403180-80403199 MS.gene80760:CDS 40.0%
! GATACCGCTCTTTGATTTAC+AGG - chr4.4:80404864-80404883 MS.gene80760:intron 40.0%
! TGTCAGATACTACTAGCTCT+TGG - chr4.4:80400793-80400812 MS.gene80760:CDS 40.0%
! TGTGAGATTTCTTGGTGTAC+TGG - chr4.4:80405154-80405173 MS.gene80760:intron 40.0%
! TTGAAATCAAGGAGTACGAC+GGG - chr4.4:80402338-80402357 MS.gene80760:intron 40.0%
!! ATTGATGTGTTGTTTGGCAG+TGG - chr4.4:80405691-80405710 MS.gene80760:intron 40.0%
!! CATTTTCAGGGATATCTGCT+AGG - chr4.4:80403677-80403696 MS.gene80760:intron 40.0%
!! GAACAACTTCCTGGTTTTCA+AGG - chr4.4:80400868-80400887 MS.gene80760:intron 40.0%
!! GACCCAGTTTCAAGTTCAAA+AGG + chr4.4:80400901-80400920 None:intergenic 40.0%
!! TCTTTACGCTCTGGTTCTTA+GGG + chr4.4:80403467-80403486 None:intergenic 40.0%
!! TTGATGTGTTGTTTGGCAGT+GGG - chr4.4:80405692-80405711 MS.gene80760:intron 40.0%
!!! GAGCATTTTGCTTTAGAAGG+TGG - chr4.4:80404984-80405003 MS.gene80760:intron 40.0%
!!! TTTTGCTTTAGAAGGTGGTC+GGG - chr4.4:80404989-80405008 MS.gene80760:intron 40.0%
AAAGATCTTCTCCACAGACG+CGG + chr4.4:80404340-80404359 None:intergenic 45.0%
AACACCTTTGTCCATGACTG+TGG + chr4.4:80402388-80402407 None:intergenic 45.0%
ACTCCGTTGTAGATGATTGG+AGG - chr4.4:80405773-80405792 MS.gene80760:intron 45.0%
AGATCTCCGATCCTATGATG+AGG - chr4.4:80403962-80403981 MS.gene80760:intron 45.0%
AGGCGAAGTAGTCTATGGTT+TGG - chr4.4:80406138-80406157 MS.gene80760:intron 45.0%
AGGGAAGAGAAATGAGAGAC+TGG - chr4.4:80404169-80404188 MS.gene80760:intron 45.0%
AGTAATGCATAGTTCGTCGG+TGG - chr4.4:80401133-80401152 MS.gene80760:intron 45.0%
ATGCTAACTAGGGTGCAGAA+GGG - chr4.4:80402768-80402787 MS.gene80760:intron 45.0%
CAGCGATGTTCTTACCTTCA+CGG + chr4.4:80406513-80406532 None:intergenic 45.0%
CCAGAAAAAGAAGAACAGCC+AGG + chr4.4:80401459-80401478 None:intergenic 45.0%
CCATTAGTTGAAAGACGCCT+TGG - chr4.4:80405082-80405101 MS.gene80760:CDS 45.0%
CGGTTTACTTGCCTCATCAT+AGG + chr4.4:80403976-80403995 None:intergenic 45.0%
GCAGGGAACCATAGGAAAAT+GGG - chr4.4:80404766-80404785 MS.gene80760:CDS 45.0%
GCTTCACCTTCTGTTCTGAT+AGG + chr4.4:80405453-80405472 None:intergenic 45.0%
GGAACAGATCAAGTCCTGAA+AGG + chr4.4:80404288-80404307 None:intergenic 45.0%
GGACATTAGTGTTAGATGGG+GGG + chr4.4:80405244-80405263 None:intergenic 45.0%
GGGACATTAGTGTTAGATGG+GGG + chr4.4:80405245-80405264 None:intergenic 45.0%
GTGGAGAAGATCTTTGACTC+AGG - chr4.4:80404345-80404364 MS.gene80760:intron 45.0%
TAACAATGAGCGTGTTCGCA+AGG - chr4.4:80404540-80404559 MS.gene80760:intron 45.0%
TAGTTCGTCGGTGGTAAGTA+AGG - chr4.4:80401142-80401161 MS.gene80760:intron 45.0%
TATGCTAACTAGGGTGCAGA+AGG - chr4.4:80402767-80402786 MS.gene80760:intron 45.0%
TGCAGGGAACCATAGGAAAA+TGG - chr4.4:80404765-80404784 MS.gene80760:CDS 45.0%
TGGCCTCCAATCATCTACAA+CGG + chr4.4:80405779-80405798 None:intergenic 45.0%
TTAGTTAAACAGCGCCTCAG+TGG - chr4.4:80405341-80405360 MS.gene80760:intron 45.0%
TTGAAAGACGCCTTGGTTAG+TGG - chr4.4:80405089-80405108 MS.gene80760:CDS 45.0%
TTGATAGGTACGTGGGGTTA+GGG - chr4.4:80401340-80401359 MS.gene80760:intron 45.0%
TTGTAGATGATTGGAGGCCA+TGG - chr4.4:80405779-80405798 MS.gene80760:intron 45.0%
TTTGATAGGTACGTGGGGTT+AGG - chr4.4:80401339-80401358 MS.gene80760:intron 45.0%
! ACAAAGCACTCCACTAACCA+AGG + chr4.4:80405102-80405121 None:intergenic 45.0%
! CCAAGGCGTCTTTCAACTAA+TGG + chr4.4:80405085-80405104 None:intergenic 45.0%
! CCTGGCTGTTCTTCTTTTTC+TGG - chr4.4:80401456-80401475 MS.gene80760:intron 45.0%
! CGAAGTAGTCTATGGTTTGG+TGG - chr4.4:80406141-80406160 MS.gene80760:intron 45.0%
! GTAGATTTGCCACTTGGAAC+TGG - chr4.4:80402655-80402674 MS.gene80760:CDS 45.0%
! GTTTTGCCATGTTCACTAGG+TGG - chr4.4:80406695-80406714 MS.gene80760:CDS 45.0%
! TGGAGGCCATGGTTTGTAAA+TGG - chr4.4:80405790-80405809 MS.gene80760:intron 45.0%
! TGTTAGCCCATTTTGTGCTG+AGG + chr4.4:80404525-80404544 None:intergenic 45.0%
!! CTTTACGCTCTGGTTCTTAG+GGG + chr4.4:80403466-80403485 None:intergenic 45.0%
!! GTCTTTACGCTCTGGTTCTT+AGG + chr4.4:80403468-80403487 None:intergenic 45.0%
!! TCTATTGCACCGTTTTTCGG+AGG - chr4.4:80405019-80405038 MS.gene80760:intron 45.0%
!! TGATGTGTTGTTTGGCAGTG+GGG - chr4.4:80405693-80405712 MS.gene80760:intron 45.0%
!! ATAAAAAATTATAGAAAAAT+AGG + chr4.4:80406375-80406394 None:intergenic 5.0%
!!! AATCTTATTATATATTTTTT+TGG + chr4.4:80402127-80402146 None:intergenic 5.0%
CAACTAATGGCGAAACCGCT+AGG + chr4.4:80405072-80405091 None:intergenic 50.0%
CTATGCTCTTCAGTCCACTG+AGG + chr4.4:80405358-80405377 None:intergenic 50.0%
CTGGAACAGTAACCCCAAGT+CGG - chr4.4:80405173-80405192 MS.gene80760:intron 50.0%
CTTTGGTTAACTGGTGGTCC+TGG - chr4.4:80401438-80401457 MS.gene80760:intron 50.0%
GAAGCAACCGACAGAGATGA+TGG + chr4.4:80403578-80403597 None:intergenic 50.0%
TCTTGAAGAATGGCTGGGAC+AGG + chr4.4:80403210-80403229 None:intergenic 50.0%
TGATAGGTACGTGGGGTTAG+GGG - chr4.4:80401341-80401360 MS.gene80760:intron 50.0%
TGGAACAGTAACCCCAAGTC+GGG - chr4.4:80405174-80405193 MS.gene80760:intron 50.0%
TGTGGCCTCAAGACCAAACT+AGG + chr4.4:80402370-80402389 None:intergenic 50.0%
! AAATTGGAGCAGCGGACTTG+AGG + chr4.4:80405270-80405289 None:intergenic 50.0%
! CATTGCTCAGGAGTGTACTC+AGG + chr4.4:80406676-80406695 None:intergenic 50.0%
! TGAGCATTGCAGGGAACCAT+AGG - chr4.4:80404758-80404777 MS.gene80760:CDS 50.0%
! TGGGTCTTGTGTAAGCCTAG+CGG - chr4.4:80405054-80405073 MS.gene80760:intron 50.0%
!! AAGACATACAAGAGCGCTCC+AGG - chr4.4:80402882-80402901 MS.gene80760:intron 50.0%
!! AAGAGCGCTCCAGGAGAAAA+TGG - chr4.4:80402891-80402910 MS.gene80760:intron 50.0%
!! CAAGGCACTGCATATTCGAG+AGG - chr4.4:80404558-80404577 MS.gene80760:intron 50.0%
!! CTCAGTGGACTGAAGAGCAT+AGG - chr4.4:80405356-80405375 MS.gene80760:intron 50.0%
GAGGCCACAGTCATGGACAA+AGG - chr4.4:80402381-80402400 MS.gene80760:intron 55.0%
GGAACAGTAACCCCAAGTCG+GGG - chr4.4:80405175-80405194 MS.gene80760:intron 55.0%
TAACCCCAAGTCGGGGCTAA+GGG - chr4.4:80405182-80405201 MS.gene80760:intron 55.0%
! GGTAGTGGCCCTTGAAAACC+AGG + chr4.4:80400880-80400899 None:intergenic 55.0%
! TGGTCTTGAGGCCACAGTCA+TGG - chr4.4:80402374-80402393 MS.gene80760:intron 55.0%
!! ACGCTCTGGTTCTTAGGGGA+AGG + chr4.4:80403462-80403481 None:intergenic 55.0%
!! CGCTCTGGTTCTTAGGGGAA+GGG + chr4.4:80403461-80403480 None:intergenic 55.0%
!! GCGTGCCTAGTTTGGTCTTG+AGG - chr4.4:80402362-80402381 MS.gene80760:intron 55.0%
!! GCTCTGGTTCTTAGGGGAAG+GGG + chr4.4:80403460-80403479 None:intergenic 55.0%
AACCCCAAGTCGGGGCTAAG+GGG - chr4.4:80405183-80405202 MS.gene80760:intron 60.0%
GTAACCCCAAGTCGGGGCTA+AGG - chr4.4:80405181-80405200 MS.gene80760:intron 60.0%
GTGACGATGATCCGCGTCTG+TGG - chr4.4:80404326-80404345 MS.gene80760:CDS 60.0%
TCACGGATCATCGGAGCGAC+TGG - chr4.4:80402698-80402717 MS.gene80760:intron 60.0%
! GGAGCAGCGGACTTGAGGTT+GGG + chr4.4:80405265-80405284 None:intergenic 60.0%
! TGGAGCAGCGGACTTGAGGT+TGG + chr4.4:80405266-80405285 None:intergenic 60.0%
AGGCCCCTTAGCCCCGACTT+GGG + chr4.4:80405189-80405208 None:intergenic 65.0%
AGTCGGGGCTAAGGGGCCTA+AGG - chr4.4:80405190-80405209 MS.gene80760:intron 65.0%
GTCGGGGCTAAGGGGCCTAA+GGG - chr4.4:80405191-80405210 MS.gene80760:intron 65.0%
TAGGCCCCTTAGCCCCGACT+TGG + chr4.4:80405190-80405209 None:intergenic 65.0%
! CGACGGGAGCGTGCCTAGTT+TGG - chr4.4:80402354-80402373 MS.gene80760:intron 65.0%
! GGCCCCTTAGCCCCGACTTG+GGG + chr4.4:80405188-80405207 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 80400745 80406738 80400745 ID=MS.gene80760
chr4.4 mRNA 80400745 80406738 80400745 ID=MS.gene80760.t1;Parent=MS.gene80760
chr4.4 exon 80406566 80406738 80406566 ID=MS.gene80760.t1.exon1;Parent=MS.gene80760.t1
chr4.4 CDS 80406566 80406738 80406566 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80405988 80406136 80405988 ID=MS.gene80760.t1.exon2;Parent=MS.gene80760.t1
chr4.4 CDS 80405988 80406136 80405988 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80405081 80405157 80405081 ID=MS.gene80760.t1.exon3;Parent=MS.gene80760.t1
chr4.4 CDS 80405081 80405157 80405081 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80404727 80404846 80404727 ID=MS.gene80760.t1.exon4;Parent=MS.gene80760.t1
chr4.4 CDS 80404727 80404846 80404727 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80404243 80404345 80404243 ID=MS.gene80760.t1.exon5;Parent=MS.gene80760.t1
chr4.4 CDS 80404243 80404345 80404243 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80403917 80403954 80403917 ID=MS.gene80760.t1.exon6;Parent=MS.gene80760.t1
chr4.4 CDS 80403917 80403954 80403917 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80403699 80403797 80403699 ID=MS.gene80760.t1.exon7;Parent=MS.gene80760.t1
chr4.4 CDS 80403699 80403797 80403699 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80403500 80403586 80403500 ID=MS.gene80760.t1.exon8;Parent=MS.gene80760.t1
chr4.4 CDS 80403500 80403586 80403500 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80403063 80403200 80403063 ID=MS.gene80760.t1.exon9;Parent=MS.gene80760.t1
chr4.4 CDS 80403063 80403200 80403063 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80402904 80402975 80402904 ID=MS.gene80760.t1.exon10;Parent=MS.gene80760.t1
chr4.4 CDS 80402904 80402975 80402904 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80402598 80402713 80402598 ID=MS.gene80760.t1.exon11;Parent=MS.gene80760.t1
chr4.4 CDS 80402598 80402713 80402598 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80401659 80401772 80401659 ID=MS.gene80760.t1.exon12;Parent=MS.gene80760.t1
chr4.4 CDS 80401659 80401772 80401659 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80400966 80401011 80400966 ID=MS.gene80760.t1.exon13;Parent=MS.gene80760.t1
chr4.4 CDS 80400966 80401011 80400966 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
chr4.4 exon 80400745 80400828 80400745 ID=MS.gene80760.t1.exon14;Parent=MS.gene80760.t1
chr4.4 CDS 80400745 80400828 80400745 ID=cds.MS.gene80760.t1;Parent=MS.gene80760.t1
Gene Sequence

>MS.gene80760

ATGAACATGATGGCTCCTCCTTCTCATAATTCACTTCACTATTGTTGTTGTCAGATACTACTAGCTCTTGGACTATTTAGTTTGAATATGTTAACTCATATTGAAGCTTATGGCTCAAAGGTTGAACAACTTCCTGGTTTTCAAGGGCCACTACCTTTTGAACTTGAAACTGGGTCAGCAATCTTAACCATTCCATTTTCTGTTACAAATTCACTTTTTTTTTTCTTTTCTATTTTAGGACATTAAACTTTAATTTAATTAGTTTAGATAACTTGTTTAATTTAATAGTTTATAAAGAATGACACTCCTCAAGGTTTAGTTTAGCAAGAAAGAGTTAAACTCAATTTAAAAAGAATTAATTTTTTTTTTTTTTTTTTTGTGTTGACATAGTAATGCATAGTTCGTCGGTGGTAAGTAAGGTCTGACTAAAAAGTGTTTCATGTAGGATTCAACTCGGGTTCTTCTGAACAATTCATCATTAGTGTAGTTCATTAACCGCTTGAACTCAATCATTTGTTGATATACAATAATTTTACACTGAAATTCGATGAGACTCTTGCAGTGTGTCAAGTAATGTAGTTGTGTGTTCATATATTTGATAGGTACGTGGGGTTAGGGGAAACAGATGATGACATGCAAGTATTCTACTATTTTATCAAATCAGAAAATAATCCTCAGAAAGATCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGCTGTTCTTCTTTTTCTGGACTTGCCTATCAAATAGGTAATTTTCAAATCACAACTTTATTTTTTGTGAATCTTGATTTTGACAGTTTGTTAATACATAATTGGATATGTATAACACACATGGATTGTTTTTCTGGTCACAAAACGATGTGTTTAAATTATCTTATTTGAGCTTATCTTCTGACATAAGCATTTGTGAGTCGAATTACGAGAGGTTATCATCTGCATCCTTTTTAGACAGTTTCAAAAAGTGTACTAAGGTCACTATTGAAAATATGAATCATGATTTGAAGCAGATGTTCAATTGTAGATGTGGCTGCATTTGGAGTAAAAAATCAAACATGTTACATTTATCAGATTTAAATACAATCATATAATAGCCAGTTAGTATAGATTTTGTATCATGCAGATTCATTTTGCAGTGAAATGTGGGCACCAATTTTCTAATCAATACGAACCATAATGTATATCTATTTTGGAATTGAATCTTATATTGATTCCTGATTTATTATGTTGTATCCCGATTGACTATGATGATCTCGATTCATTCAAATGAATAGCTACCTAACCTTAGTTTAGTCGGTCACTTTTCTTTTTTTTTCATCTTGTATAGTCCATCACTTTTCTTTTATTAGGTTATAATTTAACTCTGTCACTTGTTTTTACCAAAAAAATATATAATAAGATTCAACTGACAGTCCACAAAATAGTTCTTCTCATTCACGATATGAATCTCGATGTGATAACCATGATTTGGCTATTTTCTTGTGTTTGGTTTAGCTTATCAGTAGAATTGATCCTACTGAAATTGATCCACTCAACAACATTCATAGAGTGACTTTGTCATCATCAATTGAATGTTAATAGGTCCAATTGCATTTGAAATCAAGGAGTACGACGGGAGCGTGCCTAGTTTGGTCTTGAGGCCACAGTCATGGACAAAGGTGTTGATAACACCTAAATAATTCAACATTGATTTCATTTACTTAAGTTAATACAAAATTTGTACCAATAAGAACTATGATTTATATAAGTCATGTCATGTGATTATAATATGTATATAGTTTTTGTTGAGATAGCTGTACAAGTCTAAATATTCATTCTTAATATGTTTATTTTCATGATTTCATTATTGGAAGGTGATTTACCGGTAGTAATGTTAATGATCTTTTGGTCAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCACGGATCATCGGAGCGACTGGAAACTAGTTCACCATACTCTTCAATTTCTTAGGAAGGTAAGTTCATTATGCTAACTAGGGTGCAGAAGGGCACTGACGTGCTCGATAGAGTTTCTTCCACATCTTCAGACTTTTTCTTTGAAACTGCTAAAAAATTTATTCAACACCGCAACTCTATGCACAAGACATACAAGAGCGCTCCAGGAGAAAATGGAGAATAGTTGCTGCGACTAAAGACTGTGTGTTAATTTTTCTCATGATGAAGGCCGACTATGATCTTCATTTACGAAAACTGGACTATGTTACCGTTGTCATATTTCTTGTCACGCTTTCCTATTTCTCTTTGTTTAATATTTACTTTAGGAGAATCATCTCCTAACTATGACTCAAAATTCGATCATTTTCTTATCAGCTGAAACAATTATCTGTATTGTATAGTGGCTGATCGATCACTCTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCAGGCATTCCTGTCCCAGCCATTCTTCAAGAAATTTCAAATGGTTAGAAATCCTAAAATGCTCAATATTTCAGATGGATTAATCTTTAAGTAATGCTAAATTTCTTTATAATTATAATTACAATGAGGCTGAAATTTTCTAAATCATTTTAATTAGTTCCCCTCACTCTAATAAATTGATTATTTGCATTCTCCTATGGCAATAAGCAAAGCAAAGCAAAAATTTAGTATAAACTGACTTGATTCGGATTATCAGTGTCCCCTTCCCCTAAGAACCAGAGCGTAAAGACTTAAAAAACGATTGATATTTTTCCATTTGTTTGATTAACAGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTCAAGGTTTCAAACCATCATCTCTGTCGGTTGCTTCTATTACACGAACAAAAAATTTAAATACCTTTGTTCCATTTATCTTGTTATATGCATTATGAAGCCTAGACCGGTTTAAACATTTTCAGGGATATCTGCTAGGGAACCCTATAACAACACACAGAGAAAAAAATTATCAAATCCCATTTACTCATGGAATGGGAATCATTTCTGATGAACTCTACGCGGTATTATTATACTTATTATTCTTTAGTAAAGCTATACATACATCGTACTTTCCTGTTGGTTACAATGATGATATGTTTTACTTAATGGTCTACTGTTATCTATTGGCAACAGTCACTGCAGAGAAACTGTAAAAGAGAGTATGTTGATGTAGATTCCAGAAATGAGTTGTGTTTAAGAGATCTCCGATCCTATGATGAGGCAAGTAAACCGTTCCATTCCAATTTTATCTATACCTATTATTAAGATGATACTAAAGTTTTGGTGTGGTCTTTAGGAAGAGTAACATTTTCAACAGTAGCTACTTAATCATGGACATAGTCACATTAGAAGAAAAAGATAAGAAGAGAGAAAAGAAAAATGAAGTAGAAAAAAAGAAAATAATAAGGGAAGAGAAATGAGAGACTGGTAAAGATGGTGTCTGTAAGCATGTTAATCATGATGGTTAAGATGTTAATTGTTTGCCATATTGTTAAACTGTTATTTCTTCTTATCTTCAGTGCCTTTCAGGACTTGATCTGTTCCACATTTTGGATCGCTTTTGTGACGATGATCCGCGTCTGTGGAGAAGATCTTTGACTCAGGAGTTGAAGGAATCTCTTATTTCTCGTCTCACAGTGCCCGAACTAAACTGCCAAGTAATTTTTTCATAACTTATCTAGATTAATTTTTGTCCATAAAATGTTTCATCATTGTGATGTTTCTCGTTTTCATTATTGTTGTAGTTTTATAGTTTTTACCTCAGCACAAAATGGGCTAACAATGAGCGTGTTCGCAAGGCACTGCATATTCGAGAGGTTTGATATGATAAACTTATAAACTCATCATATCTAGTGATCTTCTTATGTTGAATCATAATTGGAAACAGATACTCAAGTCAATGTTACATTACAAATACTTTTGAATTTGAGTTGAATGCATCAAAGAAGTCTCAACAACTAATGGATATCAATATCATATTGATGTACATAGTTTTGAGCATTGCAGGGAACCATAGGAAAATGGGAACGTTGTTACTCTGATGATTTTGAGAATGAGATCCTTGGTAGCTTTGAGTTTCATGTAAATCTAAGCAAAAAAGGATACCGCTCTTTGATTTACAGGTGAAGATTTTCTCTTTTAATGTAGTTTTTTTCTTTTTTAAACTCGTGTTGTCACCATATATATGTAGTGTTTTTCTTGGATTAAGCTCATCTAAAGTGAGCATTTTGCTTTAGAAGGTGGTCGGGACTCAAGTCTATTGCACCGTTTTTCGGAGGTATTTTTCACTTTGGGTCTTGTGTAAGCCTAGCGGTTTCGCCATTAGTTGAAAGACGCCTTGGTTAGTGGAGTGCTTTGTATAAAGTACTCTTAATTTCAATTTCGAAGCAATGTGAGATTTCTTGGTGTACTGGAACAGTAACCCCAAGTCGGGGCTAAGGGGCCTAAGGGCTTACTAGCTATTTTTTGTGGCTTTGGCCCCCCATCTAACACTAATGTCCCAACCTCAAGTCCGCTGCTCCAATTTTCTGAAGTTTTGACCGCTTTAGTTCTTGTGTAAGTCGTCACAGTTTTGTTCTTAGTTAAACAGCGCCTCAGTGGACTGAAGAGCATAGGTGTTTATAAAGCAATGTAGTTGAGATTTTTACCTATCAGAACTTTTTACTATGCACTGTGGAACTTTTTTGCCTATCAGAACAGAAGGTGAAGCAAGTAATCTCAACTGTTGATAAGAAAATCAATGGTTAATATTGTAATACATTCATAAAATTACTATGCATGTCCCGGTAACATCAACAATTGATTTATTCATCACAGTTAAGATTACTTGTTTTACACTCTAAAGTGAATTGTCCACTTTTGAAGAGCGAGAATCATTTTTATTCTAGCTTTCTTGATGACATTAAGGCTAGCTGATTTTTTATGACAATTGATGTGTTGTTTGGCAGTGGGGATCATGATGCAGTTGTTCCTTTCATGTCTACTCAAGCTTGGATTAGGAATCTAAACTACTCCGTTGTAGATGATTGGAGGCCATGGTTTGTAAATGGTCAAGTGGGAGGGTAAGCATCAAATTTAAATATGTAAATGTTGCACCAGTCAAAATAGTCCTTCATTTTTTAGAATTAGACAATTTATCCCAAAAATTGTAAAATGTCTTTCAAAATGACCTTTTTGTTAACTTCTTCTGTTAGAGGCTATGAAGTTGTATGTTACTGAACATGTTACACTGAACATTGTTCCCACATCAATTTCAGTTCATTAGGGACTAATTTTCCTAGGAAATTTGGGTCATCATAGAGATAAGTTGTTAGTAATTGCAATTGTGCAAAACTAATTATTGGAAAATTTGGCCCTAAGAACCCTAAATTTCATAGGCGAAGTAGTCTATGGTTTGGTGGCAATGATGTGTAATCAATGTGAAGGGAGTGTGTATTCACTTAACAGGCCACGTCATAGTCTCTAATGATAAAAGTTAACAGATTAACTATTTTGACTAATACTTTGTAATTTCAGGAATGTATTTGCCAGTTCGCAAAAATCATAGACTATTTTGACAGTTATTTATAATTTCGACAACTAATTTGTCTATTCACTCTTTCTTCCAATCCTATTTTTCTATAATTTTTTATATGTATTTCATTTAGTGCCTAGAACATAATAAGACACCTTGTATCCTAATCTAAATCAACAATTTCCTTTCATGCAGATACACAAGGACATACTCGAATCGAATGACTTTTGCAACCGTGAAGGTAAGAACATCGCTGATTAAATAACAAATGTTCTATTTTGTTCTTTTAAGAATAACACTCAATTTGGTGAAATATTTAATTGTCTATAAAGGGATTATGCAAATTCATTATATTAATTTTTGCTTAATTAATTGCAGGGTTCAGGACATACAGCTCCTGAGTACACTCCTGAGCAATGTTTTGCCATGTTCACTAGGTGGATATCTAACTTGCCTTTGTAA
Protein sequence

>MS.gene80760.t1

MNMMAPPSHNSLHYCCCQILLALGLFSLNMLTHIEAYGSKVEQLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENNPQKDPLMLWLTGGPGCSSFSGLAYQIGPIAFEIKEYDGSVPSLVLRPQSWTKLCSIIFVDLPLGTGFSYAKNVTDHRSDWKLVHHTLQFLRKWLIDHSEFLSNEFYIGADSYSGIPVPAILQEISNGNEKGLQPLINLKGYLLGNPITTHREKNYQIPFTHGMGIISDELYASLQRNCKREYVDVDSRNELCLRDLRSYDECLSGLDLFHILDRFCDDDPRLWRRSLTQELKESLISRLTVPELNCQFYSFYLSTKWANNERVRKALHIREGTIGKWERCYSDDFENEILGSFEFHVNLSKKGYRSLIYSGDHDAVVPFMSTQAWIRNLNYSVVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHTAPEYTPEQCFAMFTRWISNLPL