AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022111

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022111.t1 MTR_7g021130 97.573 412 10 0 1 412 1 412 0.0 837
MS.gene022111.t1 MTR_3g498755 71.026 390 109 3 27 412 11 400 0.0 591
MS.gene022111.t1 MTR_8g099930 66.828 413 126 3 8 412 8 417 0.0 584
MS.gene022111.t1 MTR_3g434850 62.211 389 144 1 24 412 24 409 0.0 526
MS.gene022111.t1 MTR_2g449850 57.289 391 158 6 25 412 33 417 2.71e-160 460
MS.gene022111.t1 MTR_1g040370 54.427 384 133 3 29 412 29 370 9.71e-149 429
MS.gene022111.t1 MTR_3g090150 46.366 399 201 6 31 421 34 427 3.70e-123 366
MS.gene022111.t1 MTR_1g102130 47.165 388 175 5 26 412 87 445 6.09e-120 358
MS.gene022111.t1 MTR_3g090130 44.724 398 207 7 31 421 29 420 3.60e-118 353
MS.gene022111.t1 MTR_5g072570 44.417 412 217 8 11 412 7 416 5.95e-118 352
MS.gene022111.t1 MTR_3g079600 41.045 402 217 10 24 420 69 455 1.67e-99 306
MS.gene022111.t1 MTR_3g079590 41.562 397 209 10 29 420 76 454 6.89e-99 304
MS.gene022111.t1 MTR_3g034290 40.050 402 220 8 24 420 68 453 1.36e-98 303
MS.gene022111.t1 MTR_3g079570 41.310 397 209 9 29 420 77 454 4.29e-98 302
MS.gene022111.t1 MTR_0003s0560 39.950 403 221 8 24 422 67 452 4.62e-97 300
MS.gene022111.t1 MTR_7g013790 40.704 398 211 8 29 412 34 420 9.22e-97 298
MS.gene022111.t1 MTR_4g089155 41.294 402 204 9 31 413 54 442 3.92e-95 294
MS.gene022111.t1 MTR_3g079560 41.206 398 209 10 29 420 76 454 5.21e-95 294
MS.gene022111.t1 MTR_3g079620 40.640 406 208 12 29 420 76 462 8.45e-95 294
MS.gene022111.t1 MTR_4g075150 36.854 426 244 9 1 412 3 417 1.75e-94 292
MS.gene022111.t1 MTR_4g075150 36.682 428 244 9 1 412 3 419 1.93e-94 292
MS.gene022111.t1 MTR_3g034290 42.493 353 186 7 24 371 68 408 1.92e-92 285
MS.gene022111.t1 MTR_1g021010 41.250 400 202 10 30 420 75 450 2.25e-91 285
MS.gene022111.t1 MTR_1g021020 40.351 399 208 10 29 420 76 451 6.22e-91 284
MS.gene022111.t1 MTR_1g095560 37.857 420 231 11 3 412 13 412 1.43e-90 282
MS.gene022111.t1 MTR_2g012860 39.196 398 218 8 31 413 42 430 1.71e-90 282
MS.gene022111.t1 MTR_1g095560 37.857 420 231 11 3 412 13 412 2.98e-90 282
MS.gene022111.t1 MTR_2g012850 41.287 373 191 8 31 385 36 398 2.99e-90 281
MS.gene022111.t1 MTR_3g079630 40.196 408 207 13 29 420 76 462 4.22e-90 282
MS.gene022111.t1 MTR_0075s0010 40.731 383 158 6 29 405 6 325 5.52e-88 271
MS.gene022111.t1 MTR_1g020090 38.406 414 225 11 13 420 72 461 1.99e-87 275
MS.gene022111.t1 MTR_1g095540 39.086 394 218 11 29 412 31 412 9.75e-86 269
MS.gene022111.t1 MTR_4g122950 38.350 412 211 12 29 412 37 433 4.01e-85 268
MS.gene022111.t1 MTR_2g063000 37.018 389 224 10 34 412 42 419 5.15e-81 257
MS.gene022111.t1 MTR_4g122960 35.941 409 223 12 29 412 37 431 1.21e-80 257
MS.gene022111.t1 MTR_2g062990 33.890 419 257 10 3 412 11 418 1.17e-79 254
MS.gene022111.t1 MTR_2g062980 34.129 419 256 10 3 412 11 418 1.84e-79 253
MS.gene022111.t1 MTR_0003s0560 47.170 265 129 4 24 285 67 323 4.17e-78 246
MS.gene022111.t1 MTR_2g081620 34.272 426 243 13 1 412 17 419 6.50e-75 242
MS.gene022111.t1 MTR_2g063000 31.783 387 216 10 34 412 42 388 1.00e-60 204
MS.gene022111.t1 MTR_7g051430 32.360 445 227 18 26 412 23 451 1.12e-51 181
MS.gene022111.t1 MTR_1g050545 29.474 380 228 12 42 405 81 436 9.77e-47 168
MS.gene022111.t1 MTR_8g011350 30.369 461 255 19 3 412 6 451 1.49e-46 167
MS.gene022111.t1 MTR_8g011350 30.369 461 255 19 3 412 6 451 1.89e-46 167
MS.gene022111.t1 MTR_7g051430 39.338 272 143 11 26 285 23 284 1.49e-45 163
MS.gene022111.t1 MTR_7g080180 30.297 472 251 21 1 412 1 454 8.38e-45 162
MS.gene022111.t1 MTR_7g080180 30.297 472 251 21 1 412 1 454 8.95e-45 162
MS.gene022111.t1 MTR_1g094155 28.856 402 240 14 25 405 66 442 1.66e-43 159
MS.gene022111.t1 MTR_2g095750 29.067 375 228 12 46 405 102 453 2.58e-40 150
MS.gene022111.t1 MTR_4g057585 28.941 387 233 13 36 405 87 448 4.90e-40 149
MS.gene022111.t1 MTR_4g057595 28.346 381 232 12 41 405 94 449 1.23e-38 146
MS.gene022111.t1 MTR_4g021535 25.951 447 282 17 6 425 11 435 1.70e-38 145
MS.gene022111.t1 MTR_4g021520 26.402 428 276 16 7 412 16 426 1.53e-37 141
MS.gene022111.t1 MTR_2g095730 26.836 354 234 8 46 391 96 432 1.72e-37 143
MS.gene022111.t1 MTR_4g057600 27.295 403 244 13 46 426 97 472 3.52e-37 142
MS.gene022111.t1 MTR_4g021530 25.339 442 289 17 7 425 16 439 3.73e-37 141
MS.gene022111.t1 MTR_4g021520 26.402 428 276 16 7 412 16 426 3.73e-37 141
MS.gene022111.t1 MTR_3g045770 24.829 439 285 13 12 428 8 423 1.29e-36 139
MS.gene022111.t1 MTR_7g100560 35.600 250 92 5 37 280 65 251 1.64e-36 136
MS.gene022111.t1 MTR_2g018590 26.651 424 269 14 16 412 17 425 2.06e-36 139
MS.gene022111.t1 MTR_2g018600 26.980 404 255 13 34 412 37 425 5.50e-36 138
MS.gene022111.t1 MTR_3g100420 26.608 451 271 14 3 412 21 452 1.52e-35 137
MS.gene022111.t1 MTR_4g021500 26.364 440 281 15 7 422 16 436 1.65e-35 139
MS.gene022111.t1 MTR_4g021500 26.221 389 247 14 37 412 482 843 1.09e-29 122
MS.gene022111.t1 MTR_4g021500 26.364 440 281 15 7 422 16 436 1.86e-35 139
MS.gene022111.t1 MTR_4g021500 26.065 399 253 14 37 412 482 861 5.73e-31 126
MS.gene022111.t1 MTR_4g057570 28.398 412 238 18 14 405 68 442 4.12e-35 136
MS.gene022111.t1 MTR_4g021490 25.116 430 279 16 7 412 16 426 1.38e-34 134
MS.gene022111.t1 MTR_4g021510 26.730 419 268 15 16 412 24 425 2.63e-34 133
MS.gene022111.t1 MTR_2g018630 28.000 400 249 15 34 412 40 421 8.36e-33 129
MS.gene022111.t1 MTR_5g097180 28.297 364 223 9 21 376 24 357 2.75e-30 122
MS.gene022111.t1 MTR_4g084710 37.436 195 111 6 46 232 45 236 6.92e-27 112
MS.gene022111.t1 MTR_2g095710 28.763 372 212 18 35 391 85 418 2.19e-25 108
MS.gene022111.t1 MTR_2g009200 25.721 416 224 16 31 412 28 392 4.64e-25 107
MS.gene022111.t1 MTR_1g051175 49.020 102 51 1 38 138 20 121 5.45e-25 103
MS.gene022111.t1 MTR_4g021535 22.921 445 251 18 6 425 11 388 1.17e-22 99.8
MS.gene022111.t1 MTR_2g018630 25.000 320 210 12 106 412 14 316 4.61e-17 82.4
MS.gene022111.t1 MTR_4g056520 25.538 372 234 14 47 391 36 391 5.95e-15 77.0
MS.gene022111.t1 MTR_8g007520 46.479 71 38 0 342 412 111 181 1.59e-14 72.0
MS.gene022111.t1 MTR_2g084530 27.179 390 240 13 27 391 19 389 1.33e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022111.t1 AT1G28110 77.720 386 86 0 27 412 28 413 0.0 645
MS.gene022111.t1 AT1G28110 77.720 386 86 0 27 412 28 413 0.0 645
MS.gene022111.t1 AT2G33530 69.378 418 123 2 1 413 1 418 0.0 627
MS.gene022111.t1 AT1G43780 45.794 428 215 9 9 421 9 434 9.37e-125 370
MS.gene022111.t1 AT5G42240 45.614 399 206 7 23 412 23 419 3.15e-117 351
MS.gene022111.t1 AT2G12480 44.524 420 213 10 5 412 1 412 6.08e-117 350
MS.gene022111.t1 AT5G42230 43.765 409 219 7 13 412 9 415 1.92e-116 348
MS.gene022111.t1 AT5G42230 43.765 409 219 7 13 412 9 415 1.92e-116 348
MS.gene022111.t1 AT2G12480 43.091 427 203 10 5 421 1 397 3.36e-110 332
MS.gene022111.t1 AT2G12480 42.823 418 197 10 5 412 1 386 1.15e-107 325
MS.gene022111.t1 AT2G12480 42.389 427 204 10 5 421 1 395 1.19e-107 325
MS.gene022111.t1 AT3G63470 41.085 387 207 9 31 412 82 452 1.66e-95 296
MS.gene022111.t1 AT3G02110 39.702 403 213 8 29 412 36 427 2.65e-95 294
MS.gene022111.t1 AT2G05850 38.575 407 222 10 17 412 50 439 1.18e-94 293
MS.gene022111.t1 AT2G24010 40.256 390 212 8 31 412 31 407 3.54e-94 291
MS.gene022111.t1 AT2G24000 39.950 403 209 12 29 412 29 417 1.11e-93 290
MS.gene022111.t1 AT5G08260 37.613 444 222 11 4 412 8 431 2.20e-93 290
MS.gene022111.t1 AT4G30610 37.656 401 220 10 29 412 31 418 5.59e-90 280
MS.gene022111.t1 AT1G11080 37.838 444 228 12 5 413 16 446 8.35e-90 281
MS.gene022111.t1 AT1G11080 37.838 444 228 12 5 413 16 446 8.97e-90 281
MS.gene022111.t1 AT5G23210 36.170 423 224 9 23 413 44 452 1.41e-89 279
MS.gene022111.t1 AT2G35770 38.422 393 226 8 4 391 13 394 1.83e-89 279
MS.gene022111.t1 AT1G61130 38.903 401 212 11 31 413 32 417 2.48e-89 279
MS.gene022111.t1 AT3G07990 39.494 395 215 10 29 412 32 413 2.90e-89 278
MS.gene022111.t1 AT2G35780 39.119 386 211 10 21 394 20 393 3.08e-89 278
MS.gene022111.t1 AT3G17180 39.423 416 218 9 19 412 27 430 6.89e-89 277
MS.gene022111.t1 AT2G24010 38.519 405 213 9 31 412 31 422 1.08e-88 277
MS.gene022111.t1 AT3G17180 39.423 416 218 9 19 412 27 430 3.61e-88 276
MS.gene022111.t1 AT5G23210 36.019 422 224 9 23 412 44 451 5.24e-88 276
MS.gene022111.t1 AT4G15100 37.857 420 222 10 22 416 36 441 9.65e-88 275
MS.gene022111.t1 AT3G52010 40.051 392 208 11 31 412 65 439 1.06e-87 275
MS.gene022111.t1 AT4G30810 36.471 425 238 12 6 412 8 418 4.07e-86 271
MS.gene022111.t1 AT2G24010 36.279 430 213 10 31 412 2 418 1.78e-83 264
MS.gene022111.t1 AT3G52000 39.848 394 202 15 31 412 64 434 1.15e-82 262
MS.gene022111.t1 AT2G24010 39.011 364 190 8 31 371 2 356 2.13e-79 249
MS.gene022111.t1 AT3G52020 37.469 403 228 11 31 425 80 466 2.16e-79 254
MS.gene022111.t1 AT5G23210 34.711 363 191 9 83 413 8 356 1.54e-66 216
MS.gene022111.t1 AT5G23210 34.699 366 193 9 79 412 5 356 3.12e-66 217
MS.gene022111.t1 AT5G23210 34.530 362 191 9 83 412 8 355 4.87e-65 214
MS.gene022111.t1 AT3G25420 33.040 454 246 15 9 412 5 450 1.30e-56 194
MS.gene022111.t1 AT3G56540 57.143 154 63 2 31 182 80 232 2.11e-54 182
MS.gene022111.t1 AT4G12910 32.553 427 235 13 31 412 35 453 5.54e-52 181
MS.gene022111.t1 AT4G12910 32.553 427 235 13 31 412 35 453 1.36e-51 181
MS.gene022111.t1 AT2G22990 28.535 389 244 10 34 412 26 390 7.76e-45 161
MS.gene022111.t1 AT2G22990 28.535 389 244 10 34 412 26 390 1.26e-44 161
MS.gene022111.t1 AT2G22990 28.535 389 244 10 34 412 26 390 1.31e-44 161
MS.gene022111.t1 AT1G33540 28.431 408 251 12 31 412 29 421 3.13e-44 160
MS.gene022111.t1 AT1G73300 29.156 391 237 14 34 412 36 398 3.28e-44 160
MS.gene022111.t1 AT1G73300 29.156 391 237 14 34 412 36 398 3.28e-44 160
MS.gene022111.t1 AT1G73290 29.648 398 236 14 34 418 35 401 3.24e-43 156
MS.gene022111.t1 AT1G73290 30.102 392 230 14 34 412 35 395 9.78e-43 156
MS.gene022111.t1 AT1G73280 28.537 417 256 15 8 412 12 398 1.80e-42 155
MS.gene022111.t1 AT5G36180 28.680 394 241 14 31 412 33 398 2.39e-42 155
MS.gene022111.t1 AT3G45010 29.820 389 228 17 36 405 92 454 3.17e-42 156
MS.gene022111.t1 AT5G22980 29.306 389 234 12 16 391 71 431 4.10e-42 155
MS.gene022111.t1 AT1G33540 27.949 390 241 11 48 412 4 378 1.87e-41 152
MS.gene022111.t1 AT3G12230 29.136 405 225 14 31 412 27 392 3.04e-41 152
MS.gene022111.t1 AT5G09640 28.941 387 240 11 31 391 27 404 1.80e-40 150
MS.gene022111.t1 AT2G22920 28.607 402 227 14 34 412 28 392 3.37e-40 148
MS.gene022111.t1 AT2G22920 28.607 402 227 14 34 412 28 392 1.08e-39 147
MS.gene022111.t1 AT3G12240 29.024 410 219 16 31 412 28 393 2.38e-39 147
MS.gene022111.t1 AT1G73290 33.221 298 162 11 34 319 35 307 3.60e-39 143
MS.gene022111.t1 AT2G22990 27.763 389 238 11 34 412 26 381 3.94e-39 145
MS.gene022111.t1 AT3G12220 28.680 394 241 14 31 412 27 392 4.63e-39 146
MS.gene022111.t1 AT3G12203 27.665 394 238 11 34 412 12 373 5.24e-39 145
MS.gene022111.t1 AT2G22970 28.101 395 236 13 34 412 28 390 6.32e-39 145
MS.gene022111.t1 AT2G22970 27.654 405 245 13 34 422 28 400 6.50e-39 145
MS.gene022111.t1 AT3G12203 27.708 397 240 11 31 412 30 394 6.77e-39 145
MS.gene022111.t1 AT2G22970 28.101 395 236 13 34 412 28 390 1.29e-38 144
MS.gene022111.t1 AT1G73280 30.000 350 209 12 8 345 12 337 1.32e-38 143
MS.gene022111.t1 AT3G10450 28.173 394 243 14 31 412 29 394 2.01e-38 144
MS.gene022111.t1 AT1G73310 28.499 393 237 15 34 412 36 398 4.47e-38 143
MS.gene022111.t1 AT3G10450 28.173 394 243 14 31 412 29 394 4.51e-38 143
MS.gene022111.t1 AT2G22980 26.531 392 242 13 34 412 29 387 5.19e-38 142
MS.gene022111.t1 AT1G73310 28.499 393 237 15 34 412 36 398 5.44e-38 143
MS.gene022111.t1 AT2G23000 27.681 401 240 13 31 412 25 394 5.58e-38 143
MS.gene022111.t1 AT2G23000 27.681 401 240 13 31 412 25 394 5.58e-38 143
MS.gene022111.t1 AT3G10410 29.545 396 232 19 28 407 84 448 8.06e-38 144
MS.gene022111.t1 AT2G22980 26.531 392 242 13 34 412 29 387 8.07e-38 142
MS.gene022111.t1 AT2G22980 26.531 392 242 13 34 412 29 387 9.89e-38 142
MS.gene022111.t1 AT3G12220 28.989 376 228 14 48 412 15 362 1.24e-37 141
MS.gene022111.t1 AT1G73270 27.411 394 246 14 31 412 33 398 1.68e-37 142
MS.gene022111.t1 AT1G73270 27.411 394 246 14 31 412 33 398 1.87e-37 141
MS.gene022111.t1 AT3G10450 28.191 376 231 13 48 412 4 351 5.05e-37 139
MS.gene022111.t1 AT3G10450 28.191 376 231 13 48 412 4 351 1.02e-36 139
MS.gene022111.t1 AT2G23010 25.420 417 275 11 8 412 2 394 3.73e-36 138
MS.gene022111.t1 AT2G23010 25.420 417 275 11 8 412 2 394 4.42e-36 137
MS.gene022111.t1 AT3G12203 27.174 368 222 10 59 412 1 336 5.91e-35 133
MS.gene022111.t1 AT2G22920 30.408 319 175 11 34 336 28 315 6.05e-34 129
MS.gene022111.t1 AT3G12220 35.426 223 132 6 31 243 27 247 6.84e-34 130
MS.gene022111.t1 AT2G22980 28.527 319 191 11 34 340 29 322 1.38e-32 126
MS.gene022111.t1 AT2G22970 34.529 223 125 7 34 242 28 243 1.44e-32 125
MS.gene022111.t1 AT2G24000 27.250 400 201 15 29 412 29 354 6.63e-32 125
MS.gene022111.t1 AT1G15000 35.602 191 115 5 46 231 37 224 1.64e-27 114
MS.gene022111.t1 AT5G36180 27.244 312 196 11 105 412 12 296 6.37e-25 105
MS.gene022111.t1 AT5G36180 27.244 312 196 11 105 412 12 296 6.37e-25 105
MS.gene022111.t1 AT5G36180 27.244 312 196 11 105 412 12 296 6.95e-25 105
MS.gene022111.t1 AT5G36180 27.244 312 196 11 105 412 12 296 7.09e-25 104
MS.gene022111.t1 AT2G22990 26.510 298 194 7 117 412 2 276 1.52e-24 103
MS.gene022111.t1 AT2G22990 26.510 298 194 7 117 412 2 276 1.57e-24 103
MS.gene022111.t1 AT1G73280 26.923 312 197 11 105 412 12 296 2.14e-24 103
MS.gene022111.t1 AT5G22960 34.118 170 89 5 36 202 25 174 7.83e-23 95.9
MS.gene022111.t1 AT1G73310 27.070 314 194 12 105 412 12 296 5.61e-22 96.7
MS.gene022111.t1 AT1G73280 26.846 298 187 11 119 412 1 271 2.15e-21 94.7
MS.gene022111.t1 AT2G27920 24.877 406 268 10 11 391 1 394 1.36e-19 91.3
MS.gene022111.t1 AT2G22980 23.256 301 194 10 117 412 2 270 1.19e-17 83.6

Find 77 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAATTTGTGATCTTATT+AGG 0.075907 7.4:-80589289 None:intergenic
GGGAAGCTGTTTAATTTAAA+AGG 0.200997 7.4:+80591069 MS.gene022111:CDS
TTTCTAAACCTCTTGTTCTT+TGG 0.216078 7.4:+80589419 MS.gene022111:CDS
ATCTAATCTTCTTGCAAAAC+TGG 0.232198 7.4:+80590669 MS.gene022111:CDS
TTTCAGAAAATGGGCCATTT+AGG 0.242646 7.4:+80589578 MS.gene022111:CDS
GCCTCTCCTTTAGGCCTAAA+TGG 0.253449 7.4:-80589592 None:intergenic
AAGCTTCTGTTTCTGTATTC+AGG 0.258582 7.4:-80590704 None:intergenic
GATGCTCCAATTCAACAAAA+AGG 0.288560 7.4:+80591047 MS.gene022111:CDS
ATTCAAGAGCTGAGTTCTTT+TGG 0.300704 7.4:+80591479 MS.gene022111:CDS
CCTCTTGTTCTTTGGCTCAA+TGG 0.320744 7.4:+80589427 MS.gene022111:CDS
CTAACCAAAGCCTCTCCTTT+AGG 0.326445 7.4:-80589601 None:intergenic
GTAAATTTGTGATCTTATTA+GGG 0.331087 7.4:-80589288 None:intergenic
CCATACAGGGTATGGTTTGC+GGG 0.335736 7.4:+80593445 MS.gene022111:CDS
ACATACCTGTAGACCAAAAC+TGG 0.349044 7.4:-80592729 None:intergenic
GGGCCTGGTTGTTCTTCTCT+TGG 0.358083 7.4:+80589544 MS.gene022111:intron
CAAGGCAGGAATTCCAGTTT+TGG 0.363129 7.4:+80592716 MS.gene022111:CDS
GGTATGGTTTGCGGGGCAAC+AGG 0.363742 7.4:+80593453 MS.gene022111:CDS
GCTCATTACACTTGAACAAA+TGG 0.365760 7.4:-80591599 None:intergenic
TCTGTTGCAAATTCTAGAAC+TGG 0.377807 7.4:-80591451 None:intergenic
GGTGTAAATGACAAGATTAC+AGG 0.386172 7.4:+80590285 MS.gene022111:CDS
TAGGCCTAAAGGAGAGGCTT+TGG 0.395103 7.4:+80589597 MS.gene022111:CDS
GCTTTACATGCACATCTGAT+TGG 0.395553 7.4:+80592100 MS.gene022111:CDS
CACCTGTGTTCCAGCTGAAC+TGG 0.397389 7.4:-80589627 None:intergenic
TAAGAAAATCCTACTCCAAT+TGG 0.409592 7.4:-80590237 None:intergenic
AGCTTCTGTTTCTGTATTCA+GGG 0.412704 7.4:-80590703 None:intergenic
TAGAACTTTAGTACATCAAT+TGG 0.417903 7.4:+80593393 MS.gene022111:CDS
AGGTCATTATGTTCCTCAAT+TGG 0.418352 7.4:+80591017 MS.gene022111:intron
CCCGCAAACCATACCCTGTA+TGG 0.434400 7.4:-80593445 None:intergenic
GGTTGTTCTTCTCTTGGTGT+TGG 0.436843 7.4:+80589550 MS.gene022111:CDS
GCCATACAGGGTATGGTTTG+CGG 0.437537 7.4:+80593444 MS.gene022111:CDS
TACTTGTTTCTGTACTAACT+TGG 0.447886 7.4:-80591621 None:intergenic
AACAGAAGCTTGTTCATTGT+AGG 0.448955 7.4:+80590716 MS.gene022111:CDS
TGGTTAGGAACCAGTTCAGC+TGG 0.449673 7.4:+80589617 MS.gene022111:CDS
TGAATACGACTGTGCCATAC+AGG 0.450005 7.4:+80593431 MS.gene022111:CDS
CTCATTACACTTGAACAAAT+GGG 0.461870 7.4:-80591598 None:intergenic
CTTTATGTCAATCAGTGTGT+TGG 0.463466 7.4:+80592638 MS.gene022111:intron
TTGCCTACAACCGTGATTGT+TGG 0.463942 7.4:-80592687 None:intergenic
ATACCAACAATCACGGTTGT+AGG 0.468487 7.4:+80592684 MS.gene022111:CDS
GATTCAGTTATTCCATTGAC+TGG 0.474345 7.4:+80593367 MS.gene022111:CDS
ACTGATACTTCATCTTATGA+AGG 0.482380 7.4:+80590264 MS.gene022111:CDS
AAAGTTCTACTTCCAGTCAA+TGG 0.487618 7.4:-80593379 None:intergenic
CAAGAAGATTAGATTATCCC+TGG 0.488331 7.4:-80590660 None:intergenic
AAGAGTGAATTACCTGCTGC+AGG 0.488577 7.4:-80592140 None:intergenic
CACCTGAGGATTGAGGACTT+TGG 0.491746 7.4:-80591704 None:intergenic
AGAGGCAAATATGTTGTACT+TGG 0.493990 7.4:+80590209 MS.gene022111:intron
CTAAAGGAGAGGCTTTGGTT+AGG 0.494226 7.4:+80589602 MS.gene022111:CDS
CTTGTTCTTTGGCTCAATGG+AGG 0.499959 7.4:+80589430 MS.gene022111:CDS
ACTTGAACAAATGGGAGAAA+CGG 0.502123 7.4:-80591590 None:intergenic
ATCTGATTGGAGTACATAGA+TGG 0.512377 7.4:+80592113 MS.gene022111:CDS
ATAGATGGTCTCCCTGCAGC+AGG 0.526560 7.4:+80592128 MS.gene022111:CDS
TTGTACTTGGAATCACCAAT+TGG 0.528164 7.4:+80590222 MS.gene022111:CDS
AACCAAAGTCCTCAATCCTC+AGG 0.530021 7.4:+80591702 MS.gene022111:CDS
GGATTATGAGTTGCGTGACT+TGG 0.531533 7.4:+80592659 MS.gene022111:CDS
AACCAGTTCAGCTGGAACAC+AGG 0.532001 7.4:+80589625 MS.gene022111:CDS
CGACTGTGCCATACAGGGTA+TGG 0.537833 7.4:+80593437 MS.gene022111:CDS
AATGGGCCATTTAGGCCTAA+AGG 0.545330 7.4:+80589586 MS.gene022111:CDS
ATAAACTCACCTGAGGATTG+AGG 0.553038 7.4:-80591711 None:intergenic
ATTGTAGGAGAGAGCTATGC+CGG 0.554576 7.4:+80590731 MS.gene022111:CDS
AGCATCAGCTCAGCCAATTG+AGG 0.567974 7.4:-80591030 None:intergenic
TTGGAATCACCAATTGGAGT+AGG 0.570704 7.4:+80590228 MS.gene022111:CDS
AAATCAACATGTGGTTGACC+AGG 0.571157 7.4:-80589310 None:intergenic
GCCATTTAGGCCTAAAGGAG+AGG 0.574984 7.4:+80589591 MS.gene022111:CDS
CCATTGAGCCAAAGAACAAG+AGG 0.585597 7.4:-80589427 None:intergenic
GTAGGCAAGCTAGTCAAGGC+AGG 0.592081 7.4:+80592702 MS.gene022111:CDS
TGCAGCAACACACATTGCAA+TGG 0.598224 7.4:-80589230 None:intergenic
ACACCAAGAGAAGAACAACC+AGG 0.602850 7.4:-80589547 None:intergenic
AATAAGATCACAAATTTACC+TGG 0.604906 7.4:+80589292 MS.gene022111:CDS
AGAGTGAATTACCTGCTGCA+GGG 0.606922 7.4:-80592139 None:intergenic
ATTAGGGTGTGAAACTGCAA+AGG 0.615335 7.4:-80589272 None:intergenic
TGAATCCTATTGTGTTTCTG+TGG 0.620107 7.4:+80593476 MS.gene022111:CDS
GGTTGTAGGCAAGCTAGTCA+AGG 0.630864 7.4:+80592698 MS.gene022111:CDS
CTTGGAAATACCAACAATCA+CGG 0.633624 7.4:+80592677 MS.gene022111:CDS
ACAACAAAGTAGAGAAGACA+TGG 0.637953 7.4:-80589206 None:intergenic
CATACAGGGTATGGTTTGCG+GGG 0.643800 7.4:+80593446 MS.gene022111:CDS
GAATACGACTGTGCCATACA+GGG 0.657389 7.4:+80593432 MS.gene022111:CDS
AACTGATGAAAATCAACATG+TGG 0.670035 7.4:-80589319 None:intergenic
TATGTGAGAGAATACTGTAA+CGG 0.670524 7.4:+80591565 MS.gene022111:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAAAAAAAAAAAT+TGG + chr7.4:80590056-80590075 MS.gene022111:intron 0.0%
!!! ATAATAAATTATTGTTTTAC+CGG - chr7.4:80590753-80590772 None:intergenic 10.0%
!!! GTAAAAAAGTTTTTAAAATA+GGG - chr7.4:80589744-80589763 None:intergenic 10.0%
!! AAAATAATTTCAGAAAATCA+AGG - chr7.4:80590624-80590643 None:intergenic 15.0%
!! AATAAGAAAAGAAGAATAAT+TGG - chr7.4:80591122-80591141 None:intergenic 15.0%
!! ATTCACAAAATTATTCTAAA+GGG - chr7.4:80592923-80592942 None:intergenic 15.0%
!! CAATTAATTATGATTTATGA+AGG - chr7.4:80593320-80593339 None:intergenic 15.0%
!! TTAAGATATTTGTAATTGTA+TGG - chr7.4:80592278-80592297 None:intergenic 15.0%
!! TTAGAATATTCATAACATAA+GGG - chr7.4:80590807-80590826 None:intergenic 15.0%
!!! CGTAAAAAAGTTTTTAAAAT+AGG - chr7.4:80589745-80589764 None:intergenic 15.0%
!!! TTAAAAACTTTTTTACGAAA+AGG + chr7.4:80589748-80589767 MS.gene022111:intron 15.0%
!!! TTTAGAATATTCATAACATA+AGG - chr7.4:80590808-80590827 None:intergenic 15.0%
!! AACATAATCACTTATATTAG+TGG + chr7.4:80592823-80592842 MS.gene022111:intron 20.0%
!! ATTATGTTATGCAAAACTTT+AGG - chr7.4:80590498-80590517 None:intergenic 20.0%
!! ATTGTAAAAACTGTAATTGT+AGG - chr7.4:80591941-80591960 None:intergenic 20.0%
!! CATTCACAAAATTATTCTAA+AGG - chr7.4:80592924-80592943 None:intergenic 20.0%
!! GTAAATTTGTGATCTTATTA+GGG - chr7.4:80589291-80589310 None:intergenic 20.0%
!! TAAAATACGAACTTCAAATT+TGG - chr7.4:80591824-80591843 None:intergenic 20.0%
!! TTAAATTTACATTTGCACTA+AGG - chr7.4:80593249-80593268 None:intergenic 20.0%
!!! AACATGTTTTATGATAAGAA+AGG - chr7.4:80592569-80592588 None:intergenic 20.0%
!!! AGTTGAATTGTTTTCATATA+AGG - chr7.4:80593118-80593137 None:intergenic 20.0%
!!! CACAATTTTATTCTTTTGAA+TGG + chr7.4:80590351-80590370 MS.gene022111:intron 20.0%
!!! GTGTTTTGTAATTTATCATT+AGG + chr7.4:80590997-80591016 MS.gene022111:intron 20.0%
!!! TAGAATAATTTTGTGAATGA+GGG + chr7.4:80592925-80592944 MS.gene022111:intron 20.0%
!!! TCTATTTTCATAAGCAATAT+TGG - chr7.4:80593090-80593109 None:intergenic 20.0%
!!! TCTTTTAATCAAATATCACA+TGG + chr7.4:80591797-80591816 MS.gene022111:intron 20.0%
!!! TTAAGTTGTTTATTCAAACA+TGG + chr7.4:80589945-80589964 MS.gene022111:intron 20.0%
!!! TTAGAATAATTTTGTGAATG+AGG + chr7.4:80592924-80592943 MS.gene022111:intron 20.0%
! AAAAGAAACTGAAGAAAACT+AGG + chr7.4:80591209-80591228 MS.gene022111:intron 25.0%
! AAAATCAAGGCAAATCTTTA+AGG - chr7.4:80590611-80590630 None:intergenic 25.0%
! AAATGAAACCAACACATTAA+TGG - chr7.4:80590139-80590158 None:intergenic 25.0%
! AATAAGATCACAAATTTACC+TGG + chr7.4:80589292-80589311 MS.gene022111:CDS 25.0%
! AATTAAGCGCTTATCATATA+AGG - chr7.4:80593181-80593200 None:intergenic 25.0%
! ACAAATTCTACATTGAAATC+TGG + chr7.4:80592486-80592505 MS.gene022111:intron 25.0%
! ACATGACAGAATTTAGTAAA+AGG - chr7.4:80590467-80590486 None:intergenic 25.0%
! ATACAAAATTAGTGTAGACA+AGG - chr7.4:80589672-80589691 None:intergenic 25.0%
! ATCTTTGATATTGCCAAAAT+TGG + chr7.4:80592215-80592234 MS.gene022111:intron 25.0%
! ATTAAGCGCTTATCATATAA+GGG - chr7.4:80593180-80593199 None:intergenic 25.0%
! ATTGGAGAGCTTATAAAAAT+AGG - chr7.4:80593072-80593091 None:intergenic 25.0%
! CCTAAGTAATCAATTAAACT+AGG + chr7.4:80593222-80593241 MS.gene022111:intron 25.0%
! CCTAGTTTAATTGATTACTT+AGG - chr7.4:80593225-80593244 None:intergenic 25.0%
! GGTAAATTTGTGATCTTATT+AGG - chr7.4:80589292-80589311 None:intergenic 25.0%
! TAGAACTTTAGTACATCAAT+TGG + chr7.4:80593393-80593412 MS.gene022111:CDS 25.0%
! TCATTGAACAAAGTTTATGT+AGG + chr7.4:80590026-80590045 MS.gene022111:intron 25.0%
! TCTATAAGGACTAAATACTT+GGG - chr7.4:80589990-80590009 None:intergenic 25.0%
! TTCTATAAGGACTAAATACT+TGG - chr7.4:80589991-80590010 None:intergenic 25.0%
!! AAATGTCTGTAAATTTTGTC+TGG + chr7.4:80589711-80589730 MS.gene022111:intron 25.0%
!! GATTGAAGTTTTACAATTTC+AGG - chr7.4:80590836-80590855 None:intergenic 25.0%
!!! AATAGGCTGAAAACTTTTTT+TGG - chr7.4:80593055-80593074 None:intergenic 25.0%
!!! TCATTCTAAGATCAAATAGA+AGG - chr7.4:80590329-80590348 None:intergenic 25.0%
!!! TTGAAAAAATTGTTTTGCAG+TGG + chr7.4:80593337-80593356 MS.gene022111:intron 25.0%
!!! TTGTTTCATGTTGTTTTGAA+GGG + chr7.4:80589524-80589543 MS.gene022111:intron 25.0%
!!! TTTGTTTCATGTTGTTTTGA+AGG + chr7.4:80589523-80589542 MS.gene022111:intron 25.0%
AAAACAACACTATTATGCAG+TGG - chr7.4:80590568-80590587 None:intergenic 30.0%
AACTGATGAAAATCAACATG+TGG - chr7.4:80589322-80589341 None:intergenic 30.0%
AACTTTATGGAAACGACTTA+TGG - chr7.4:80589863-80589882 None:intergenic 30.0%
AATCATGTTTCTTGTAAGCA+CGG - chr7.4:80592172-80592191 None:intergenic 30.0%
ACCAACACATTAATGGAAAT+TGG - chr7.4:80590132-80590151 None:intergenic 30.0%
ACTGATACTTCATCTTATGA+AGG + chr7.4:80590264-80590283 MS.gene022111:CDS 30.0%
AGACTGTTTGGAAGAATTTA+TGG + chr7.4:80589819-80589838 MS.gene022111:intron 30.0%
ATAAACCAGAAAGAAAAAGC+TGG - chr7.4:80591187-80591206 None:intergenic 30.0%
ATCTAATCTTCTTGCAAAAC+TGG + chr7.4:80590669-80590688 MS.gene022111:CDS 30.0%
ATGCTCCAATTCAACAAAAA+GGG + chr7.4:80591048-80591067 MS.gene022111:CDS 30.0%
ATGTCTTTAAGCTTTCCATA+GGG + chr7.4:80593007-80593026 MS.gene022111:intron 30.0%
ATTAACAAGTATGTACCCTA+TGG - chr7.4:80593025-80593044 None:intergenic 30.0%
ATTCACACATTCAGATACAT+TGG - chr7.4:80591916-80591935 None:intergenic 30.0%
CAATTCACATTTACACACAA+TGG - chr7.4:80590188-80590207 None:intergenic 30.0%
CTCATTACACTTGAACAAAT+GGG - chr7.4:80591601-80591620 None:intergenic 30.0%
CTTATGAACAAACTATTCTG+AGG - chr7.4:80592888-80592907 None:intergenic 30.0%
TAAGAAAATCCTACTCCAAT+TGG - chr7.4:80590240-80590259 None:intergenic 30.0%
TAATCACTTATATTAGTGGC+TGG + chr7.4:80592827-80592846 MS.gene022111:intron 30.0%
TAGATAAACTAAACCATGCA+TGG - chr7.4:80589774-80589793 None:intergenic 30.0%
TATGTGAGAGAATACTGTAA+CGG + chr7.4:80591565-80591584 MS.gene022111:CDS 30.0%
TCCAATTTCCATTAATGTGT+TGG + chr7.4:80590128-80590147 MS.gene022111:intron 30.0%
TGGCACTAACATAAAGAAAA+AGG - chr7.4:80591167-80591186 None:intergenic 30.0%
TTTCTAAACCTCTTGTTCTT+TGG + chr7.4:80589419-80589438 MS.gene022111:CDS 30.0%
! AAGTTACCTATGACTTTTAC+TGG + chr7.4:80592862-80592881 MS.gene022111:intron 30.0%
! ATGCAAAACTTTAGGAGAAA+GGG - chr7.4:80590490-80590509 None:intergenic 30.0%
! GGGAAGCTGTTTAATTTAAA+AGG + chr7.4:80591069-80591088 MS.gene022111:CDS 30.0%
! GTGTCTATTTTGCTTCTATA+AGG - chr7.4:80590004-80590023 None:intergenic 30.0%
! TATGCAAAACTTTAGGAGAA+AGG - chr7.4:80590491-80590510 None:intergenic 30.0%
! TGGGCTAATAACACTTATTT+TGG - chr7.4:80589971-80589990 None:intergenic 30.0%
! TTGGTGCATTTTCAGAAAAT+GGG + chr7.4:80589569-80589588 MS.gene022111:CDS 30.0%
! TTTTTCCACAGAAACACAAT+AGG - chr7.4:80593484-80593503 None:intergenic 30.0%
!! CAATCAAGTTTAAAGTACTG+AGG + chr7.4:80591957-80591976 MS.gene022111:intron 30.0%
!! GTTGATTTTCATCAGTTTTC+AGG + chr7.4:80589325-80589344 MS.gene022111:CDS 30.0%
!! TACTTGTTTCTGTACTAACT+TGG - chr7.4:80591624-80591643 None:intergenic 30.0%
AAAGTTCTACTTCCAGTCAA+TGG - chr7.4:80593382-80593401 None:intergenic 35.0%
ACTTGAACAAATGGGAGAAA+CGG - chr7.4:80591593-80591612 None:intergenic 35.0%
AGAGGCAAATATGTTGTACT+TGG + chr7.4:80590209-80590228 MS.gene022111:intron 35.0%
AGGTCATTATGTTCCTCAAT+TGG + chr7.4:80591017-80591036 MS.gene022111:intron 35.0%
AGTCGTTTCCATAAAGTTCT+CGG + chr7.4:80589865-80589884 MS.gene022111:intron 35.0%
ATATTGACACATGTGACATG+TGG + chr7.4:80591310-80591329 MS.gene022111:intron 35.0%
ATCTGATTGGAGTACATAGA+TGG + chr7.4:80592113-80592132 MS.gene022111:CDS 35.0%
ATTTAGATCGAAGACATGTC+CGG + chr7.4:80591251-80591270 MS.gene022111:intron 35.0%
CAAGAAGATTAGATTATCCC+TGG - chr7.4:80590663-80590682 None:intergenic 35.0%
CATGTCTTTAAGCTTTCCAT+AGG + chr7.4:80593006-80593025 MS.gene022111:intron 35.0%
CTTGGAAATACCAACAATCA+CGG + chr7.4:80592677-80592696 MS.gene022111:CDS 35.0%
CTTTATGTCAATCAGTGTGT+TGG + chr7.4:80592638-80592657 MS.gene022111:intron 35.0%
GATGCTCCAATTCAACAAAA+AGG + chr7.4:80591047-80591066 MS.gene022111:CDS 35.0%
GATTCAGTTATTCCATTGAC+TGG + chr7.4:80593367-80593386 MS.gene022111:CDS 35.0%
GCTCATTACACTTGAACAAA+TGG - chr7.4:80591602-80591621 None:intergenic 35.0%
GGTGTAAATGACAAGATTAC+AGG + chr7.4:80590285-80590304 MS.gene022111:CDS 35.0%
GTGGTCAGATTGAGATTATA+CGG + chr7.4:80592426-80592445 MS.gene022111:intron 35.0%
TAATAAGCAAGACATGATGC+AGG - chr7.4:80592756-80592775 None:intergenic 35.0%
TATGTAGACACAACTAGACA+TGG - chr7.4:80593295-80593314 None:intergenic 35.0%
TGCCAGTAGATAGTTCAAAT+AGG - chr7.4:80592951-80592970 None:intergenic 35.0%
TGCTCCAATTCAACAAAAAG+GGG + chr7.4:80591049-80591068 MS.gene022111:CDS 35.0%
TGGCGATAAGGTTTAAATTG+AGG - chr7.4:80592336-80592355 None:intergenic 35.0%
TGTCTTTCTCTTTATAGCCA+GGG + chr7.4:80590643-80590662 MS.gene022111:intron 35.0%
TGTGTAAATGTGAATTGCAG+AGG + chr7.4:80590191-80590210 MS.gene022111:intron 35.0%
TTGACATTGTTACCAACGTA+GGG - chr7.4:80590867-80590886 None:intergenic 35.0%
TTGGTTATTGTTGGACTGTT+CGG - chr7.4:80592517-80592536 None:intergenic 35.0%
TTGTACTTGGAATCACCAAT+TGG + chr7.4:80590222-80590241 MS.gene022111:CDS 35.0%
TTGTCTTTCTCTTTATAGCC+AGG + chr7.4:80590642-80590661 MS.gene022111:intron 35.0%
TTTCAGAAAATGGGCCATTT+AGG + chr7.4:80589578-80589597 MS.gene022111:CDS 35.0%
TTTCTTATTCCTCCTAGTGT+AGG + chr7.4:80591133-80591152 MS.gene022111:intron 35.0%
TTTGACATTGTTACCAACGT+AGG - chr7.4:80590868-80590887 None:intergenic 35.0%
! AACAGAAGCTTGTTCATTGT+AGG + chr7.4:80590716-80590735 MS.gene022111:CDS 35.0%
! ATTCAAGAGCTGAGTTCTTT+TGG + chr7.4:80591479-80591498 MS.gene022111:CDS 35.0%
! CATGTCTTGCCTTTTGAATT+CGG + chr7.4:80592354-80592373 MS.gene022111:intron 35.0%
! CTGCATTTCTTCACCAATTT+TGG - chr7.4:80592231-80592250 None:intergenic 35.0%
! GTTGGTGCATTTTCAGAAAA+TGG + chr7.4:80589568-80589587 MS.gene022111:CDS 35.0%
! TGAATCCTATTGTGTTTCTG+TGG + chr7.4:80593476-80593495 MS.gene022111:CDS 35.0%
!! AAGCTTCTGTTTCTGTATTC+AGG - chr7.4:80590707-80590726 None:intergenic 35.0%
!! AGCTTCTGTTTCTGTATTCA+GGG - chr7.4:80590706-80590725 None:intergenic 35.0%
!! TACGTTGGTAACAATGTCAA+AGG + chr7.4:80590867-80590886 MS.gene022111:intron 35.0%
!! TCTGTTGCAAATTCTAGAAC+TGG - chr7.4:80591454-80591473 None:intergenic 35.0%
AAATCAACATGTGGTTGACC+AGG - chr7.4:80589313-80589332 None:intergenic 40.0%
ACATACCTGTAGACCAAAAC+TGG - chr7.4:80592732-80592751 None:intergenic 40.0%
AGCTATCTCCGAGAACTTTA+TGG - chr7.4:80589876-80589895 None:intergenic 40.0%
ATAAACTCACCTGAGGATTG+AGG - chr7.4:80591714-80591733 None:intergenic 40.0%
ATACCAACAATCACGGTTGT+AGG + chr7.4:80592684-80592703 MS.gene022111:CDS 40.0%
ATTAGGGTGTGAAACTGCAA+AGG - chr7.4:80589275-80589294 None:intergenic 40.0%
CACACATTCAGATACATTGG+TGG - chr7.4:80591913-80591932 None:intergenic 40.0%
CACATGTGTCAATATCGTGT+TGG - chr7.4:80591305-80591324 None:intergenic 40.0%
CGAATTCAAAAGGCAAGACA+TGG - chr7.4:80592356-80592375 None:intergenic 40.0%
GCATGCAATCCGAATTCAAA+AGG - chr7.4:80592366-80592385 None:intergenic 40.0%
GCTTTACATGCACATCTGAT+TGG + chr7.4:80592100-80592119 MS.gene022111:CDS 40.0%
GGCCTATTTGAACTATCTAC+TGG + chr7.4:80592946-80592965 MS.gene022111:intron 40.0%
GGTGAGTTTATCATCGGATT+TGG + chr7.4:80591723-80591742 MS.gene022111:intron 40.0%
TCAAACATGTGTCACAGTGT+CGG + chr7.4:80591276-80591295 MS.gene022111:intron 40.0%
TCCTCAGGTGAGTTTATCAT+CGG + chr7.4:80591717-80591736 MS.gene022111:intron 40.0%
TTGGAATCACCAATTGGAGT+AGG + chr7.4:80590228-80590247 MS.gene022111:CDS 40.0%
TTTAGATCGAAGACATGTCC+GGG + chr7.4:80591252-80591271 MS.gene022111:intron 40.0%
! GCTTCCCCTTTTTGTTGAAT+TGG - chr7.4:80591056-80591075 None:intergenic 40.0%
! GTCAGCACATTGGTTATTGT+TGG - chr7.4:80592526-80592545 None:intergenic 40.0%
! TTTTACGAAAAGGCCATGCA+TGG + chr7.4:80589758-80589777 MS.gene022111:intron 40.0%
!! ATTGTTTTGCAGTGGTGATC+AGG + chr7.4:80593345-80593364 MS.gene022111:intron 40.0%
!! GAATTCCAGTTTTGGTCTAC+AGG + chr7.4:80592724-80592743 MS.gene022111:CDS 40.0%
!! TAGTGCCAGCTTTTTCTTTC+TGG + chr7.4:80591179-80591198 MS.gene022111:intron 40.0%
AAAGGCAAGACATGGCGATA+AGG - chr7.4:80592348-80592367 None:intergenic 45.0%
AACCAAAGTCCTCAATCCTC+AGG + chr7.4:80591702-80591721 MS.gene022111:CDS 45.0%
AAGAGTGAATTACCTGCTGC+AGG - chr7.4:80592143-80592162 None:intergenic 45.0%
AATGGGCCATTTAGGCCTAA+AGG + chr7.4:80589586-80589605 MS.gene022111:CDS 45.0%
ACACCAAGAGAAGAACAACC+AGG - chr7.4:80589550-80589569 None:intergenic 45.0%
AGAGTGAATTACCTGCTGCA+GGG - chr7.4:80592142-80592161 None:intergenic 45.0%
ATTGTAGGAGAGAGCTATGC+CGG + chr7.4:80590731-80590750 MS.gene022111:CDS 45.0%
CATTGTTACCAACGTAGGGA+CGG - chr7.4:80590863-80590882 None:intergenic 45.0%
CCATTGAGCCAAAGAACAAG+AGG - chr7.4:80589430-80589449 None:intergenic 45.0%
CTAACCAAAGCCTCTCCTTT+AGG - chr7.4:80589604-80589623 None:intergenic 45.0%
CTGAGGCCAGTAAAAGTCAT+AGG - chr7.4:80592871-80592890 None:intergenic 45.0%
GAATACGACTGTGCCATACA+GGG + chr7.4:80593432-80593451 MS.gene022111:CDS 45.0%
GGATTATGAGTTGCGTGACT+TGG + chr7.4:80592659-80592678 MS.gene022111:CDS 45.0%
GTCGATCGATCAAGATTGTG+TGG - chr7.4:80591891-80591910 None:intergenic 45.0%
TCCGATGATAAACTCACCTG+AGG - chr7.4:80591721-80591740 None:intergenic 45.0%
TGAAGAAATGCAGCCAACGT+AGG + chr7.4:80592238-80592257 MS.gene022111:intron 45.0%
TGAATACGACTGTGCCATAC+AGG + chr7.4:80593431-80593450 MS.gene022111:CDS 45.0%
TGCAGCAACACACATTGCAA+TGG - chr7.4:80589233-80589252 None:intergenic 45.0%
TTAGATCGAAGACATGTCCG+GGG + chr7.4:80591253-80591272 MS.gene022111:intron 45.0%
TTGCCTACAACCGTGATTGT+TGG - chr7.4:80592690-80592709 None:intergenic 45.0%
! CAAGGCAGGAATTCCAGTTT+TGG + chr7.4:80592716-80592735 MS.gene022111:CDS 45.0%
! CCTCTTGTTCTTTGGCTCAA+TGG + chr7.4:80589427-80589446 MS.gene022111:CDS 45.0%
! CTAAAGGAGAGGCTTTGGTT+AGG + chr7.4:80589602-80589621 MS.gene022111:CDS 45.0%
! CTTGTTCTTTGGCTCAATGG+AGG + chr7.4:80589430-80589449 MS.gene022111:CDS 45.0%
! GAAGCACTTGTGAGACTGTT+TGG + chr7.4:80589807-80589826 MS.gene022111:intron 45.0%
! GAGTTTTCTTTCACGCAGCT+TGG + chr7.4:80591424-80591443 MS.gene022111:intron 45.0%
! GCTGAGTTCTTTTGGTCTCA+TGG + chr7.4:80591487-80591506 MS.gene022111:CDS 45.0%
! GGTTGTTCTTCTCTTGGTGT+TGG + chr7.4:80589550-80589569 MS.gene022111:CDS 45.0%
!!! TCATGTTGTTTTGAAGGGCC+TGG + chr7.4:80589529-80589548 MS.gene022111:intron 45.0%
!!! TTAATCTTTTTATTATATTA+TGG + chr7.4:80590102-80590121 MS.gene022111:intron 5.0%
AACCAGTTCAGCTGGAACAC+AGG + chr7.4:80589625-80589644 MS.gene022111:CDS 50.0%
AAGGTGATGCAGCCTACACT+AGG - chr7.4:80591148-80591167 None:intergenic 50.0%
AATCAAGTCCGTCCCTACGT+TGG + chr7.4:80590852-80590871 MS.gene022111:intron 50.0%
ACAAGCAGTCAGCACATCAG+TGG + chr7.4:80592407-80592426 MS.gene022111:intron 50.0%
AGCATCAGCTCAGCCAATTG+AGG - chr7.4:80591033-80591052 None:intergenic 50.0%
CACCTGAGGATTGAGGACTT+TGG - chr7.4:80591707-80591726 None:intergenic 50.0%
CTGTGACACATGTTTGACCC+CGG - chr7.4:80591273-80591292 None:intergenic 50.0%
CTTTCACGCAGTCAGCACAT+TGG - chr7.4:80592536-80592555 None:intergenic 50.0%
GACTGCAATTGAGCCTACGT+TGG - chr7.4:80592254-80592273 None:intergenic 50.0%
GCCATACAGGGTATGGTTTG+CGG + chr7.4:80593444-80593463 MS.gene022111:CDS 50.0%
GCCATTTAGGCCTAAAGGAG+AGG + chr7.4:80589591-80589610 MS.gene022111:CDS 50.0%
GCCTCTCCTTTAGGCCTAAA+TGG - chr7.4:80589595-80589614 None:intergenic 50.0%
GGTTGTAGGCAAGCTAGTCA+AGG + chr7.4:80592698-80592717 MS.gene022111:CDS 50.0%
TAGGCCTAAAGGAGAGGCTT+TGG + chr7.4:80589597-80589616 MS.gene022111:CDS 50.0%
TGGTTAGGAACCAGTTCAGC+TGG + chr7.4:80589617-80589636 MS.gene022111:CDS 50.0%
! CATACAGGGTATGGTTTGCG+GGG + chr7.4:80593446-80593465 MS.gene022111:CDS 50.0%
! CCATACAGGGTATGGTTTGC+GGG + chr7.4:80593445-80593464 MS.gene022111:CDS 50.0%
! GTTCTTTGGCTCAATGGAGG+TGG + chr7.4:80589433-80589452 MS.gene022111:intron 50.0%
ATAGATGGTCTCCCTGCAGC+AGG + chr7.4:80592128-80592147 MS.gene022111:CDS 55.0%
CACCTGTGTTCCAGCTGAAC+TGG - chr7.4:80589630-80589649 None:intergenic 55.0%
CATGCAGTCAGGCACATTGG+CGG + chr7.4:80591774-80591793 MS.gene022111:intron 55.0%
CCCGCAAACCATACCCTGTA+TGG - chr7.4:80593448-80593467 None:intergenic 55.0%
CGACTGTGCCATACAGGGTA+TGG + chr7.4:80593437-80593456 MS.gene022111:CDS 55.0%
CTGCATGCAGTCAGGCACAT+TGG + chr7.4:80591771-80591790 MS.gene022111:intron 55.0%
GAGGCGTGTAACTGCGATTC+TGG - chr7.4:80592317-80592336 None:intergenic 55.0%
GGGCCTGGTTGTTCTTCTCT+TGG + chr7.4:80589544-80589563 MS.gene022111:intron 55.0%
GTAGGCAAGCTAGTCAAGGC+AGG + chr7.4:80592702-80592721 MS.gene022111:CDS 55.0%
GTGATGCAGCCTACACTAGG+AGG - chr7.4:80591145-80591164 None:intergenic 55.0%
TGCCTGACTGCATGCAGTCA+CGG - chr7.4:80591768-80591787 None:intergenic 55.0%
! TGCTGACTGCGTGAAAGCGT+GGG + chr7.4:80592539-80592558 MS.gene022111:intron 55.0%
!! GTGCTGACTGCTTGTGTGCA+TGG - chr7.4:80592402-80592421 None:intergenic 55.0%
GCCTGACTGCATGCAGTCAC+GGG - chr7.4:80591767-80591786 None:intergenic 60.0%
TCCCGTGACTGCATGCAGTC+AGG + chr7.4:80591763-80591782 MS.gene022111:intron 60.0%
! GGTATGGTTTGCGGGGCAAC+AGG + chr7.4:80593453-80593472 MS.gene022111:CDS 60.0%
!! GTGCTGACTGCGTGAAAGCG+TGG + chr7.4:80592538-80592557 MS.gene022111:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 80589208 80593528 80589208 ID=MS.gene022111
chr7.4 mRNA 80589208 80593528 80589208 ID=MS.gene022111.t1;Parent=MS.gene022111
chr7.4 exon 80589208 80589451 80589208 ID=MS.gene022111.t1.exon1;Parent=MS.gene022111.t1
chr7.4 CDS 80589208 80589451 80589208 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80589545 80589646 80589545 ID=MS.gene022111.t1.exon2;Parent=MS.gene022111.t1
chr7.4 CDS 80589545 80589646 80589545 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80590211 80590306 80590211 ID=MS.gene022111.t1.exon3;Parent=MS.gene022111.t1
chr7.4 CDS 80590211 80590306 80590211 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80590660 80590752 80590660 ID=MS.gene022111.t1.exon4;Parent=MS.gene022111.t1
chr7.4 CDS 80590660 80590752 80590660 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80591019 80591098 80591019 ID=MS.gene022111.t1.exon5;Parent=MS.gene022111.t1
chr7.4 CDS 80591019 80591098 80591019 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80591442 80591723 80591442 ID=MS.gene022111.t1.exon6;Parent=MS.gene022111.t1
chr7.4 CDS 80591442 80591723 80591442 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80592025 80592149 80592025 ID=MS.gene022111.t1.exon7;Parent=MS.gene022111.t1
chr7.4 CDS 80592025 80592149 80592025 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80592653 80592745 80592653 ID=MS.gene022111.t1.exon8;Parent=MS.gene022111.t1
chr7.4 CDS 80592653 80592745 80592653 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
chr7.4 exon 80593357 80593528 80593357 ID=MS.gene022111.t1.exon9;Parent=MS.gene022111.t1
chr7.4 CDS 80593357 80593528 80593357 ID=cds.MS.gene022111.t1;Parent=MS.gene022111.t1
Gene Sequence

>MS.gene022111

ATGTCTTCTCTACTTTGTTGTTCCATTGCAATGTGTGTTGCTGCAATTGTACTTCAACAATGTTCCTTTGCAGTTTCACACCCTAATAAGATCACAAATTTACCTGGTCAACCACATGTTGATTTTCATCAGTTTTCAGGCTATGTAAATGTTGATGATCAAAACAAAAAAGCACTCTTTTTCTACTTTGTTGAAGCTCAGAATGATGCTGTTTCTAAACCTCTTGTTCTTTGGCTCAATGGAGGTGGTTTTTAGTTTTTGTTTCTTTTATTAGTAACATTGATTCTCATCACTCACATAGATGAAAAATTGAACTTTGTTTCATGTTGTTTTGAAGGGCCTGGTTGTTCTTCTCTTGGTGTTGGTGCATTTTCAGAAAATGGGCCATTTAGGCCTAAAGGAGAGGCTTTGGTTAGGAACCAGTTCAGCTGGAACACAGGTGTGTACTTTCATCAATCAAACCTTGTCTACACTAATTTTGTATTAGCACAACTTTTGAAGTTAAATGTCTGTAAATTTTGTCTGGTTTTAGTCCCTATTTTAAAAACTTTTTTACGAAAAGGCCATGCATGGTTTAGTTTATCTAAGCTTATTTACAAGAAGCACTTGTGAGACTGTTTGGAAGAATTTATGGAAACAACTTATGAAATGTCCATAAGTCGTTTCCATAAAGTTCTCGGAGATAGCTTTTGAAAATAGCTTATAGTGTATAGAAGAATTTATATGATTAGTGTTGATTAAGTTGTTTATTCAAACATGGCCAAAATAAGTGTTATTAGCCCAAGTATTTAGTCCTTATAGAAGCAAAATAGACACTATCATTGAACAAAGTTTATGTAGGACTAAACTTAAAAAAAAAAAAAAAAATTGGATTTGATAAGACTACAAACATATTTAATCTTTTTATTATATTATGGTTTTCCAATTTCCATTAATGTGTTGGTTTCATTTTTAGCTTAACAATGACAAACTCATAACCATTGTGTGTAAATGTGAATTGCAGAGGCAAATATGTTGTACTTGGAATCACCAATTGGAGTAGGATTTTCTTATTCAACTGATACTTCATCTTATGAAGGTGTAAATGACAAGATTACAGGCAAGTTTTCAATTTTCATCCTTCTATTTGATCTTAGAATGATTCACAATTTTATTCTTTTGAATGGTCAAGCATCATTTGATTCAAGCATTTTTATGTTACTAAAGATAAATTTATTTGTTTCTCTATCTCTCTTTTTCTTTTCTTGTACTCTTTACCTTTTACTAAATTCTGTCATGTCCCTTTCTCCTAAAGTTTTGCATAACATAATGTTATTTCACTATCTACTCTTTTACTTTAATGTTATGTATGTTATGTCCACTGCATAATAGTGTTGTTTTTCTTGCAGACATGTCATGTACCTTAAAGATTTGCCTTGATTTTCTGAAATTATTTTGTCTTTCTCTTTATAGCCAGGGATAATCTAATCTTCTTGCAAAACTGGTTTGTGAAGTTCCCTGAATACAGAAACAGAAGCTTGTTCATTGTAGGAGAGAGCTATGCCGGTAAAACAATAATTTATTATTGAAGAAATATCTAATTTGCATCAATTTAGTCCCTTATGTTATGAATATTCTAAAATGATCCTGAAATTGTAAAACTTCAATCAAGTCCGTCCCTACGTTGGTAACAATGTCAAAGGCACATTTGATAACAAATCGAGACGAACTTGAATATTTATTCATTTATTATTACTTGTATATTTCTCTGTGCAAGTTGAGATAATAACATAATTATGCAGCTAATGATGTGTTTTGTAATTTATCATTAGGTCATTATGTTCCTCAATTGGCTGAGCTGATGCTCCAATTCAACAAAAAGGGGAAGCTGTTTAATTTAAAAGGCATTGCTGTGAGTTAAAGCACAAACTTCCAATTATTCTTCTTTTCTTATTCCTCCTAGTGTAGGCTGCATCACCTTTTTCTTTATGTTAGTGCCAGCTTTTTCTTTCTGGTTTATGTAAAAGAAACTGAAGAAAACTAGGCAACATAAATATTACTAAAATTTAGATCGAAGACATGTCCGGGGTCAAACATGTGTCACAGTGTCGGTGTCCAACACGATATTGACACATGTGACATGTGGTTACATTCAATCACTTTTATTTTCTTAATTTATTACGTGTGTTTACGTGTCAATGTCAATATCGTGTTTGTATCAGTGTTTTGTAGCTAACGAGTTTTCTTTCACGCAGCTTGGTAATCCAGTTCTAGAATTTGCAACAGATTTTAATTCAAGAGCTGAGTTCTTTTGGTCTCATGGATTGATCTCAGACTTAACATTTAAAATGTTCACTTCAGTTTGTAACTATTCAAGATATGTGAGAGAATACTGTAACGGTGCCGTTTCTCCCATTTGTTCAAGTGTAATGAGCCAAGTTAGTACAGAAACAAGTAAATTTGTTGACAAGTATGATGTCACTCTTGATGTTTGTATATCTTCTGTGTTTTCACAAACCAAAGTCCTCAATCCTCAGGTGAGTTTATCATCGGATTTGGATATTGCGCTATCACAGTCCCGTGACTGCATGCAGTCAGGCACATTGGCGGTCTTTTAATCAAATATCACATGGTCCAAATTTGAAGTTCGTATTTTAGATTTTTAAAATAATGCAAAGAAATGTATACATTGAAATCTACACCACACAATCTTGATCGATCGACCACCAATGTATCTGAATGTGTGAATGTCCTACAATTACAGTTTTTACAATCAAGTTTAAAGTACTGAGGTATGACTATGAAATGATGAATTTGTTTTTGTTGTCTGTCAAATAGCAAGTGACTGAAACAATTGATGTATGCGTTGAAGACGAAACTGTCAATTATCTAAACAGAAAAGATGTTCAATCAGCTTTACATGCACATCTGATTGGAGTACATAGATGGTCTCCCTGCAGCAGGTAATTCACTCTTTGTATACCGTGCTTACAAGAAACATGATTTTAAATTGTGATTTGCAATTAGTATCTTTGATATTGCCAAAATTGGTGAAGAAATGCAGCCAACGTAGGCTCAATTGCAGTCGCCATACAATTACAAATATCTTAAAATCTGTACGCTGCGACCAGAATCGCAGTTACACGCCTCAATTTAAACCTTATCGCCATGTCTTGCCTTTTGAATTCGGATTGCATGCAGTCAAAACAATTCCATGCACACAAGCAGTCAGCACATCAGTGGTCAGATTGAGATTATACGGTTTAGATTTCAAGCTCTTTCTTTAGATTATCTAAAAAACAAATTCTACATTGAAATCTGGATCGTCCGAACAGTCCAACAATAACCAATGTGCTGACTGCGTGAAAGCGTGGGAGTTCCTTTCTTATCATAAAACATGTTTTTGTTTTTTATAGTATATATATATAAGACAGAAATACATACAATTTTGCTTTATGTCAATCAGTGTGTTGGATTATGAGTTGCGTGACTTGGAAATACCAACAATCACGGTTGTAGGCAAGCTAGTCAAGGCAGGAATTCCAGTTTTGGTCTACAGGTATGTTCCTGCATCATGTCTTGCTTATTACATGTATTTGAAATAAAGATCTTATAGTTTATATATGTTTTTCTCATAACATAATCACTTATATTAGTGGCTGGATACACTTGTAAAAGTTACCTATGACTTTTACTGGCCTCAGAATAGTTTGTTCATAAGTTCTTAACTAAGCCCTTTAGAATAATTTTGTGAATGAGGGCCTATTTGAACTATCTACTGGCATAAGCACTTGTGAGATTGTTTGAGAGAGCTTATGACATGTCTTTAAGCTTTCCATAGGGTACATACTTGTTAATGACGTGTCCAAAAAAAGTTTTCAGCCTATTTTTATAAGCTCTCCAATATTGCTTATGAAAATAGATTATACCTTATATGAAAACAATTCAACTTTATTTAATCTTTTGTCATAAAAATAACTTGCAACTAAGCCCTTATATGATAAGCGCTTAATTAAGTAATTTATCTAGACAAATCCTAAGTAATCAATTAAACTAGGTCCTTAGTGCAAATGTAAATTTAACTTTTCACTTAGCATAAACTCGACCATGTCTAGTTGTGTCTACATAAGCCTTCATAAATCATAATTAATTGAAAAAATTGTTTTGCAGTGGTGATCAGGATTCAGTTATTCCATTGACTGGAAGTAGAACTTTAGTACATCAATTGGCAAAACAGCTGAGAATGAATACGACTGTGCCATACAGGGTATGGTTTGCGGGGCAACAGGTGAATCCTATTGTGTTTCTGTGGAAAAATGAGAGTAGATATTTCTCATACTGA
Protein sequence

>MS.gene022111.t1

MSSLLCCSIAMCVAAIVLQQCSFAVSHPNKITNLPGQPHVDFHQFSGYVNVDDQNKKALFFYFVEAQNDAVSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVRNQFSWNTEANMLYLESPIGVGFSYSTDTSSYEGVNDKITARDNLIFLQNWFVKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKGKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDLTFKMFTSVCNYSRYVREYCNGAVSPICSSVMSQVSTETSKFVDKYDVTLDVCISSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHAHLIGVHRWSPCSSVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKQLRMNTTVPYRVWFAGQQVNPIVFLWKNESRYFSY