AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43171

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43171.t1 MTR_7g021130 97.609 460 11 0 1 460 1 460 0.0 939
MS.gene43171.t1 MTR_3g498755 73.288 438 113 3 27 460 11 448 0.0 682
MS.gene43171.t1 MTR_8g099930 68.330 461 135 3 8 460 8 465 0.0 673
MS.gene43171.t1 MTR_3g434850 64.055 434 153 1 24 457 24 454 0.0 604
MS.gene43171.t1 MTR_2g449850 59.404 436 168 5 25 457 33 462 0.0 532
MS.gene43171.t1 MTR_1g040370 56.148 431 147 3 29 459 29 417 8.19e-176 499
MS.gene43171.t1 MTR_3g090150 48.165 436 213 6 31 458 34 464 7.03e-147 427
MS.gene43171.t1 MTR_1g102130 48.618 434 193 5 26 458 87 491 3.94e-145 424
MS.gene43171.t1 MTR_5g072570 45.952 457 235 8 11 457 7 461 2.83e-141 413
MS.gene43171.t1 MTR_3g090130 46.774 434 218 7 31 457 29 456 9.97e-141 412
MS.gene43171.t1 MTR_7g013790 43.243 444 226 8 29 458 34 465 4.92e-121 361
MS.gene43171.t1 MTR_0003s0560 42.694 438 230 8 24 457 67 487 2.80e-117 353
MS.gene43171.t1 MTR_3g034290 42.396 434 229 8 29 457 73 490 3.45e-116 350
MS.gene43171.t1 MTR_3g079600 43.256 430 223 11 29 453 74 487 1.16e-113 343
MS.gene43171.t1 MTR_3g079590 43.023 430 221 11 29 453 76 486 1.19e-113 343
MS.gene43171.t1 MTR_3g079570 43.023 430 220 10 29 453 77 486 1.20e-112 341
MS.gene43171.t1 MTR_4g075150 37.263 475 270 10 1 459 3 465 1.04e-110 335
MS.gene43171.t1 MTR_3g079620 42.212 443 222 13 29 457 76 498 1.65e-110 335
MS.gene43171.t1 MTR_4g075150 37.421 473 270 10 1 459 3 463 1.68e-110 334
MS.gene43171.t1 MTR_1g095560 39.140 465 252 12 3 457 13 456 1.79e-110 334
MS.gene43171.t1 MTR_3g079560 42.396 434 226 9 29 457 76 490 2.51e-110 335
MS.gene43171.t1 MTR_4g089155 41.761 443 231 9 31 457 54 485 3.12e-109 332
MS.gene43171.t1 MTR_2g012860 40.590 441 239 9 31 457 42 473 1.25e-107 327
MS.gene43171.t1 MTR_3g079630 41.950 441 218 14 29 453 76 494 5.01e-105 322
MS.gene43171.t1 MTR_1g021010 41.553 438 222 11 30 458 75 487 1.60e-104 320
MS.gene43171.t1 MTR_1g095540 40.319 439 239 12 29 457 31 456 1.70e-104 318
MS.gene43171.t1 MTR_1g021020 41.284 436 227 11 29 458 76 488 8.87e-104 318
MS.gene43171.t1 MTR_1g095560 36.620 497 252 13 3 457 13 488 9.26e-104 318
MS.gene43171.t1 MTR_2g012850 40.136 441 239 8 31 457 36 465 3.48e-103 316
MS.gene43171.t1 MTR_1g020090 40.596 436 228 12 29 458 88 498 1.19e-100 310
MS.gene43171.t1 MTR_2g063000 38.479 434 245 11 34 457 42 463 4.32e-100 308
MS.gene43171.t1 MTR_2g062980 36.207 464 275 11 3 457 11 462 1.25e-99 306
MS.gene43171.t1 MTR_2g062990 35.991 464 276 11 3 457 11 462 1.36e-99 306
MS.gene43171.t1 MTR_4g122950 38.950 457 235 11 29 457 37 477 8.39e-98 302
MS.gene43171.t1 MTR_4g122960 37.307 453 246 13 29 457 37 475 2.18e-93 291
MS.gene43171.t1 MTR_2g081620 36.403 467 259 14 1 453 17 459 2.63e-93 290
MS.gene43171.t1 MTR_3g034290 42.816 348 182 7 29 371 73 408 2.17e-90 281
MS.gene43171.t1 MTR_0075s0010 40.731 383 158 6 29 405 6 325 7.96e-88 271
MS.gene43171.t1 MTR_2g063000 33.796 432 237 11 34 457 42 432 1.74e-79 254
MS.gene43171.t1 MTR_0003s0560 47.170 265 129 4 24 285 67 323 1.30e-77 246
MS.gene43171.t1 MTR_7g051430 32.657 493 250 17 26 456 23 495 2.54e-64 216
MS.gene43171.t1 MTR_8g011350 30.680 515 271 19 3 456 6 495 8.47e-61 206
MS.gene43171.t1 MTR_7g080180 31.008 516 278 21 1 456 1 498 2.14e-57 197
MS.gene43171.t1 MTR_1g050545 29.673 428 257 15 42 453 81 480 8.02e-53 185
MS.gene43171.t1 MTR_1g094155 29.778 450 266 17 25 453 66 486 5.37e-51 180
MS.gene43171.t1 MTR_8g011350 29.918 488 256 19 3 429 6 468 8.61e-51 179
MS.gene43171.t1 MTR_4g021520 27.331 472 304 16 7 456 16 470 1.05e-49 176
MS.gene43171.t1 MTR_4g021535 27.215 474 304 17 6 456 11 466 1.06e-49 176
MS.gene43171.t1 MTR_4g021530 26.427 473 307 17 7 456 16 470 2.45e-48 172
MS.gene43171.t1 MTR_4g021490 26.371 474 306 16 7 456 16 470 9.44e-48 171
MS.gene43171.t1 MTR_2g018590 27.079 469 298 14 16 456 17 469 2.75e-47 169
MS.gene43171.t1 MTR_2g018600 27.069 447 288 12 34 456 37 469 4.19e-47 169
MS.gene43171.t1 MTR_4g021510 27.489 462 298 14 16 456 24 469 4.46e-47 169
MS.gene43171.t1 MTR_3g100420 27.495 491 304 14 3 456 21 496 6.66e-47 169
MS.gene43171.t1 MTR_2g095750 29.234 431 249 19 46 454 102 498 1.38e-46 169
MS.gene43171.t1 MTR_4g057585 29.195 435 262 17 36 453 87 492 5.11e-46 167
MS.gene43171.t1 MTR_7g080180 30.380 474 252 21 1 414 1 456 3.48e-45 164
MS.gene43171.t1 MTR_4g021500 27.234 470 295 15 7 450 16 464 5.38e-45 168
MS.gene43171.t1 MTR_4g021500 26.852 432 278 14 37 456 482 887 2.84e-41 157
MS.gene43171.t1 MTR_2g018630 28.378 444 279 15 34 456 40 465 6.33e-45 163
MS.gene43171.t1 MTR_4g021500 27.234 470 295 15 7 450 16 464 7.42e-45 168
MS.gene43171.t1 MTR_4g021500 26.697 442 284 14 37 456 482 905 1.58e-42 161
MS.gene43171.t1 MTR_7g051430 39.855 276 136 11 26 285 23 284 9.79e-45 161
MS.gene43171.t1 MTR_4g057595 28.671 429 261 16 41 453 94 493 2.08e-44 162
MS.gene43171.t1 MTR_2g095730 27.934 426 264 16 46 454 96 495 2.07e-43 160
MS.gene43171.t1 MTR_4g057570 29.011 455 277 18 14 454 68 490 1.67e-42 157
MS.gene43171.t1 MTR_4g057600 28.205 429 255 16 46 454 97 492 5.26e-42 155
MS.gene43171.t1 MTR_3g045770 25.270 463 302 14 12 451 8 449 4.07e-40 150
MS.gene43171.t1 MTR_4g021520 26.512 430 277 16 7 414 16 428 9.52e-38 143
MS.gene43171.t1 MTR_7g100560 35.600 250 92 5 37 280 65 251 3.53e-36 136
MS.gene43171.t1 MTR_5g097180 26.364 440 284 11 21 451 24 432 6.89e-34 132
MS.gene43171.t1 MTR_4g021535 23.941 472 275 17 6 456 11 419 1.52e-33 131
MS.gene43171.t1 MTR_2g095710 27.790 439 256 22 35 454 85 481 3.01e-31 125
MS.gene43171.t1 MTR_2g009200 24.561 456 270 14 31 456 28 439 1.42e-29 120
MS.gene43171.t1 MTR_4g084710 26.588 425 258 14 46 451 45 434 1.02e-28 118
MS.gene43171.t1 MTR_2g018630 25.824 364 240 12 106 456 14 360 1.14e-28 116
MS.gene43171.t1 MTR_1g051175 48.039 102 52 1 38 138 20 121 1.49e-24 103
MS.gene43171.t1 MTR_4g056520 25.566 442 270 17 47 452 36 454 1.12e-18 88.6
MS.gene43171.t1 MTR_2g084530 27.251 422 262 15 47 440 36 440 1.18e-14 76.3
MS.gene43171.t1 MTR_7g021040 82.051 39 7 0 418 456 19 57 1.73e-14 69.7
MS.gene43171.t1 MTR_8g007520 45.070 71 39 0 342 412 111 181 2.07e-14 72.0
MS.gene43171.t1 MTR_2g039800 62.222 45 17 0 412 456 50 94 4.96e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43171.t1 AT1G28110 79.954 434 87 0 27 460 28 461 0.0 742
MS.gene43171.t1 AT1G28110 79.954 434 87 0 27 460 28 461 0.0 742
MS.gene43171.t1 AT2G33530 71.398 465 128 2 1 460 1 465 0.0 716
MS.gene43171.t1 AT1G43780 48.608 467 221 10 9 459 9 472 6.68e-150 436
MS.gene43171.t1 AT2G12480 45.824 467 233 10 5 459 1 459 7.79e-141 412
MS.gene43171.t1 AT5G42240 47.297 444 223 7 23 457 23 464 4.34e-140 410
MS.gene43171.t1 AT5G42230 44.956 456 240 7 13 459 9 462 1.01e-138 407
MS.gene43171.t1 AT5G42230 44.956 456 240 7 13 459 9 462 1.01e-138 407
MS.gene43171.t1 AT2G12480 44.731 465 217 10 5 459 1 435 1.03e-133 393
MS.gene43171.t1 AT2G12480 44.086 465 218 10 5 459 1 433 2.92e-131 387
MS.gene43171.t1 AT2G12480 43.991 466 218 11 5 459 1 434 1.93e-129 382
MS.gene43171.t1 AT2G24010 42.237 438 231 9 31 460 31 454 4.67e-117 351
MS.gene43171.t1 AT3G63470 43.155 431 228 8 31 458 82 498 6.91e-116 349
MS.gene43171.t1 AT3G02110 40.980 449 234 9 29 458 36 472 1.21e-115 348
MS.gene43171.t1 AT4G30610 39.955 448 240 10 29 460 31 465 2.56e-114 344
MS.gene43171.t1 AT2G24000 40.798 451 233 13 29 460 29 464 1.40e-112 340
MS.gene43171.t1 AT2G05850 40.732 437 235 9 31 458 64 485 6.59e-112 338
MS.gene43171.t1 AT2G24010 40.618 453 232 10 31 460 31 469 8.94e-112 338
MS.gene43171.t1 AT5G08260 38.086 491 249 11 4 459 8 478 9.34e-111 335
MS.gene43171.t1 AT3G07990 40.858 443 231 11 29 457 32 457 2.86e-109 331
MS.gene43171.t1 AT2G35780 38.789 446 250 10 21 457 20 451 1.51e-108 329
MS.gene43171.t1 AT4G30810 38.380 469 256 13 6 456 8 461 1.58e-107 327
MS.gene43171.t1 AT3G17180 40.564 461 240 9 19 457 27 475 1.68e-106 325
MS.gene43171.t1 AT2G24010 38.494 478 232 11 31 460 2 465 1.99e-106 324
MS.gene43171.t1 AT2G35770 38.612 461 261 10 4 457 13 458 2.16e-106 324
MS.gene43171.t1 AT1G61130 40.816 441 235 13 31 457 32 460 1.84e-104 319
MS.gene43171.t1 AT3G52010 41.230 439 229 13 31 458 65 485 6.18e-104 318
MS.gene43171.t1 AT1G11080 38.351 485 256 11 5 457 16 489 8.05e-104 318
MS.gene43171.t1 AT1G11080 38.351 485 256 11 5 457 16 489 8.16e-104 318
MS.gene43171.t1 AT4G15100 38.596 456 248 10 22 456 36 480 1.13e-102 315
MS.gene43171.t1 AT5G23210 36.266 466 252 10 23 457 44 495 2.45e-101 312
MS.gene43171.t1 AT3G52000 40.596 436 232 13 31 458 64 480 5.11e-99 305
MS.gene43171.t1 AT3G52020 39.080 435 241 11 31 457 80 498 3.23e-96 299
MS.gene43171.t1 AT3G17180 38.942 416 220 8 19 412 27 430 7.86e-89 278
MS.gene43171.t1 AT5G23210 35.154 421 229 9 23 412 44 451 8.06e-87 273
MS.gene43171.t1 AT5G23210 35.122 410 221 10 79 457 5 400 1.21e-79 253
MS.gene43171.t1 AT2G24010 38.736 364 191 8 31 371 2 356 9.68e-79 249
MS.gene43171.t1 AT5G23210 34.975 406 219 10 83 457 8 399 2.12e-78 249
MS.gene43171.t1 AT3G25420 33.861 505 262 17 9 456 5 494 8.11e-71 233
MS.gene43171.t1 AT4G12910 33.547 468 258 13 31 453 35 494 4.70e-66 220
MS.gene43171.t1 AT5G23210 33.518 361 196 9 83 412 8 355 7.71e-64 211
MS.gene43171.t1 AT1G33540 30.088 452 274 14 31 456 29 464 4.41e-58 198
MS.gene43171.t1 AT2G22990 29.128 436 268 13 34 456 26 433 1.69e-57 196
MS.gene43171.t1 AT1G73300 29.425 435 266 15 34 456 36 441 3.40e-57 195
MS.gene43171.t1 AT1G73300 29.425 435 266 15 34 456 36 441 3.40e-57 195
MS.gene43171.t1 AT1G73280 29.067 461 284 16 8 456 12 441 1.65e-56 194
MS.gene43171.t1 AT1G73290 30.505 436 258 15 34 456 35 438 1.76e-55 191
MS.gene43171.t1 AT1G33540 29.724 434 264 13 48 456 4 421 2.01e-55 190
MS.gene43171.t1 AT5G36180 28.995 438 270 15 31 456 33 441 2.20e-54 188
MS.gene43171.t1 AT3G56540 57.143 154 63 2 31 182 80 232 5.09e-54 182
MS.gene43171.t1 AT3G12230 29.399 449 254 15 31 456 27 435 5.52e-54 187
MS.gene43171.t1 AT3G12240 29.581 453 248 16 31 456 28 436 3.06e-53 185
MS.gene43171.t1 AT4G12910 32.401 429 237 13 31 414 35 455 1.70e-52 183
MS.gene43171.t1 AT3G10450 28.929 439 269 15 31 456 29 437 2.29e-52 182
MS.gene43171.t1 AT3G12203 28.281 442 261 12 34 456 12 416 5.10e-52 181
MS.gene43171.t1 AT5G09640 28.698 453 282 14 31 456 27 465 6.43e-52 182
MS.gene43171.t1 AT3G12203 28.281 442 261 12 34 456 33 437 7.65e-52 181
MS.gene43171.t1 AT2G22970 29.157 439 262 15 34 456 28 433 2.42e-51 179
MS.gene43171.t1 AT2G23000 28.315 445 268 14 31 456 25 437 3.64e-51 179
MS.gene43171.t1 AT2G23000 28.315 445 268 14 31 456 25 437 3.64e-51 179
MS.gene43171.t1 AT3G12220 28.833 437 272 13 31 456 27 435 3.71e-51 179
MS.gene43171.t1 AT2G22990 28.211 436 263 14 34 456 26 424 3.82e-51 179
MS.gene43171.t1 AT3G10450 28.979 421 257 14 48 456 4 394 4.43e-51 178
MS.gene43171.t1 AT2G22990 29.268 410 250 12 34 430 26 408 4.55e-51 178
MS.gene43171.t1 AT2G22990 29.095 409 254 11 34 431 26 409 4.76e-51 179
MS.gene43171.t1 AT2G22920 28.700 446 257 16 34 456 28 435 8.33e-51 178
MS.gene43171.t1 AT2G23010 26.681 461 301 12 8 456 2 437 2.04e-50 177
MS.gene43171.t1 AT1G73310 29.062 437 265 16 34 456 36 441 3.50e-50 177
MS.gene43171.t1 AT3G12220 29.117 419 259 13 48 456 15 405 8.14e-50 175
MS.gene43171.t1 AT2G22980 26.835 436 272 14 34 456 29 430 8.14e-50 176
MS.gene43171.t1 AT2G24000 29.241 448 226 16 29 460 29 401 1.20e-49 174
MS.gene43171.t1 AT2G23010 26.464 461 302 12 8 456 2 437 1.46e-49 175
MS.gene43171.t1 AT1G73270 26.941 438 279 13 31 456 33 441 1.75e-49 175
MS.gene43171.t1 AT1G73270 26.941 438 279 13 31 456 33 441 2.36e-49 175
MS.gene43171.t1 AT3G45010 28.995 438 262 19 36 454 92 499 1.95e-48 174
MS.gene43171.t1 AT3G12203 27.885 416 245 11 59 456 1 379 4.55e-48 169
MS.gene43171.t1 AT5G22980 28.638 426 266 16 41 454 95 494 6.08e-46 167
MS.gene43171.t1 AT2G22970 28.986 414 246 14 34 431 28 409 1.03e-44 161
MS.gene43171.t1 AT3G10450 28.261 414 255 14 31 431 29 413 1.08e-44 161
MS.gene43171.t1 AT2G22970 29.056 413 245 14 34 430 28 408 3.23e-44 160
MS.gene43171.t1 AT3G10410 27.955 440 272 16 28 452 84 493 7.67e-44 161
MS.gene43171.t1 AT2G22980 26.764 411 255 13 34 431 29 406 8.44e-44 159
MS.gene43171.t1 AT2G22980 26.492 419 262 13 34 439 29 414 8.76e-44 159
MS.gene43171.t1 AT3G10450 28.283 396 243 13 48 431 4 370 1.82e-43 157
MS.gene43171.t1 AT1G73290 29.873 395 233 14 34 415 35 398 2.41e-43 157
MS.gene43171.t1 AT1G73310 28.250 400 243 15 34 419 36 405 4.15e-40 149
MS.gene43171.t1 AT2G22920 28.395 405 230 15 34 415 28 395 5.83e-40 148
MS.gene43171.t1 AT1G73280 27.809 356 225 12 105 456 12 339 2.05e-38 142
MS.gene43171.t1 AT1G73290 35.000 220 131 5 34 243 35 252 7.50e-38 140
MS.gene43171.t1 AT2G22990 27.405 343 221 9 117 456 2 319 2.70e-37 139
MS.gene43171.t1 AT1G73280 29.429 350 211 12 8 345 12 337 3.42e-37 140
MS.gene43171.t1 AT5G36180 27.809 356 225 12 105 456 12 339 8.03e-37 138
MS.gene43171.t1 AT5G36180 27.809 356 225 12 105 456 12 339 8.03e-37 138
MS.gene43171.t1 AT2G22990 27.114 343 222 9 117 456 2 319 2.00e-36 137
MS.gene43171.t1 AT1G73280 27.778 342 215 12 119 456 1 314 2.25e-35 134
MS.gene43171.t1 AT3G12220 29.121 364 226 12 31 379 27 373 1.71e-34 133
MS.gene43171.t1 AT2G22920 34.247 219 132 5 34 242 28 244 2.50e-33 128
MS.gene43171.t1 AT2G22970 34.978 223 124 7 34 242 28 243 9.52e-33 127
MS.gene43171.t1 AT2G22980 28.213 319 192 11 34 340 29 322 1.17e-31 124
MS.gene43171.t1 AT5G36180 27.190 331 210 11 105 431 12 315 8.10e-30 119
MS.gene43171.t1 AT1G15000 26.841 421 267 13 46 456 37 426 4.75e-29 119
MS.gene43171.t1 AT5G36180 26.752 314 199 11 105 414 12 298 5.53e-24 102
MS.gene43171.t1 AT1G73310 26.791 321 200 12 105 419 12 303 6.61e-24 102
MS.gene43171.t1 AT2G22980 23.750 320 207 10 117 431 2 289 3.20e-23 99.8
MS.gene43171.t1 AT5G22960 33.529 170 90 5 36 202 25 174 1.74e-22 95.1
MS.gene43171.t1 AT2G27920 25.328 458 301 14 11 440 1 445 3.29e-21 96.3
MS.gene43171.t1 AT2G22920 25.188 266 158 10 200 456 23 256 5.85e-18 84.0

Find 89 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAATTTGTGATCTTATT+AGG 0.075907 7.2:-78312246 None:intergenic
GAGAAGTTGTTTAATTTAAA+AGG 0.202110 7.2:+78314147 MS.gene43171:CDS
GGTGGTTGGACTCAAGTTTA+TGG 0.215056 7.2:+78316590 MS.gene43171:CDS
TTTCTAAACCTCTTGTTCTT+TGG 0.216078 7.2:+78312376 MS.gene43171:CDS
ATCTAATCTTCTTGCAAAAC+TGG 0.232198 7.2:+78313624 MS.gene43171:CDS
TTTCAGAAAATGGGCCATTT+AGG 0.242646 7.2:+78312535 MS.gene43171:CDS
GCCTCTCCTTTAGGCCTAAA+TGG 0.253449 7.2:-78312549 None:intergenic
AAGCTTCTGTTTCTGTATTC+AGG 0.258582 7.2:-78313659 None:intergenic
CCTTACAGGGTGTGGTTTGC+AGG 0.266155 7.2:+78316373 MS.gene43171:CDS
TGAATACCACTGTGCCTTAC+AGG 0.289888 7.2:+78316359 MS.gene43171:CDS
ATTCAAGAGCTGAGTTCTTT+TGG 0.300704 7.2:+78314547 MS.gene43171:CDS
CCTCTTGTTCTTTGGCTCAA+TGG 0.320744 7.2:+78312384 MS.gene43171:CDS
CTAACCAAAGCCTCTCCTTT+AGG 0.326445 7.2:-78312558 None:intergenic
GTAAATTTGTGATCTTATTA+GGG 0.331087 7.2:-78312245 None:intergenic
TATGCTCCAATTCAACAAAA+AGG 0.337276 7.2:+78314125 MS.gene43171:CDS
AGACTGTCAATTATCTTAAC+AGG 0.354537 7.2:+78315127 MS.gene43171:CDS
GGGCCTGGTTGTTCTTCTCT+TGG 0.358083 7.2:+78312501 MS.gene43171:intron
CTGTTTAAGTCTTTCTTAGA+AGG 0.361000 7.2:+78316689 MS.gene43171:CDS
GCTCATTACACTTGAACAAA+TGG 0.365760 7.2:-78314667 None:intergenic
TCTGTTGCAAATTCTAGAAC+TGG 0.381458 7.2:-78314519 None:intergenic
GGTGTAAATGACAAGATTAC+AGG 0.386172 7.2:+78313240 MS.gene43171:CDS
TAGGCCTAAAGGAGAGGCTT+TGG 0.395103 7.2:+78312554 MS.gene43171:CDS
CAAGGCAGGAGTTCCAGTTT+TGG 0.395452 7.2:+78315716 MS.gene43171:CDS
GCTTTACATGCACATCTGAT+TGG 0.395553 7.2:+78315165 MS.gene43171:CDS
CACCTGTGTTCCAGCTGAAC+TGG 0.397389 7.2:-78312584 None:intergenic
TACTATCATTTGCAACAGTT+AGG 0.406670 7.2:+78316618 MS.gene43171:CDS
AACACTAATCAAAATTCTTC+TGG 0.409071 7.2:-78316722 None:intergenic
TAAGAAAATCCTACTCCAAT+TGG 0.412031 7.2:-78313192 None:intergenic
AGCTTCTGTTTCTGTATTCA+GGG 0.412704 7.2:-78313658 None:intergenic
TAGAACTTTAGTACATCAAT+TGG 0.417903 7.2:+78316321 MS.gene43171:CDS
AGGTCATTATGTTCCTCAAT+TGG 0.418352 7.2:+78314095 MS.gene43171:intron
ACTATCATTTGCAACAGTTA+GGG 0.420978 7.2:+78316619 MS.gene43171:CDS
ACATACCTGTAGACCAAAAC+TGG 0.425053 7.2:-78315729 None:intergenic
GGTGTGGTTTGCAGGCCAAC+AGG 0.436379 7.2:+78316381 MS.gene43171:CDS
GGTTGTTCTTCTCTTGGTGT+TGG 0.436843 7.2:+78312507 MS.gene43171:CDS
TACTTGTTTCTGTACTAACT+TGG 0.447886 7.2:-78314689 None:intergenic
TGGTTAGGAACCAGTTCAGC+TGG 0.449673 7.2:+78312574 MS.gene43171:CDS
CCTGCAAACCACACCCTGTA+AGG 0.452020 7.2:-78316373 None:intergenic
CGATCTCTCAGGCTGTGAAA+AGG 0.457438 7.2:-78316660 None:intergenic
CTCATTACACTTGAACAAAT+GGG 0.461870 7.2:-78314666 None:intergenic
CTTTATGTCAATCAGTGTGT+TGG 0.463466 7.2:+78315638 MS.gene43171:intron
TTGCCGACAACCGTGATTGT+TGG 0.469285 7.2:-78315687 None:intergenic
CAAAGAGAATTACCTGCTGC+AGG 0.474248 7.2:-78315205 None:intergenic
GATTCAGTTATTCCATTGAC+TGG 0.474345 7.2:+78316295 MS.gene43171:CDS
CACCTGAGTATTGAGGACTT+TGG 0.483689 7.2:-78314772 None:intergenic
AAAGTTCTACTTCCAGTCAA+TGG 0.487618 7.2:-78316307 None:intergenic
CAAGAAGATTAGATTATCCC+TGG 0.488331 7.2:-78313615 None:intergenic
AGAGGCAAATATGTTGTACT+TGG 0.493990 7.2:+78313164 MS.gene43171:intron
CTAAAGGAGAGGCTTTGGTT+AGG 0.494226 7.2:+78312559 MS.gene43171:CDS
ACGGATACTTCAACTTATGA+AGG 0.498127 7.2:+78313219 MS.gene43171:CDS
CTTGTTCTTTGGCTCAATGG+AGG 0.499959 7.2:+78312387 MS.gene43171:CDS
ACTTGAACAAATGGGAGAAA+CGG 0.502123 7.2:-78314658 None:intergenic
AATCAAAATTCTTCTGGTAG+AGG 0.510276 7.2:-78316716 None:intergenic
CAGAAGATATACAAACATCA+AGG 0.511989 7.2:-78314737 None:intergenic
ATCTGATTGGAGTACATAGA+TGG 0.512377 7.2:+78315178 MS.gene43171:CDS
AACAGCACAAGCGATCTCTC+AGG 0.518018 7.2:-78316671 None:intergenic
GATCTCTCAGGCTGTGAAAA+GGG 0.519136 7.2:-78316659 None:intergenic
ATAGATGGTCTCCCTGCAGC+AGG 0.526560 7.2:+78315193 MS.gene43171:CDS
TTGTACTTGGAATCACCAAT+TGG 0.528164 7.2:+78313177 MS.gene43171:CDS
GGATTATGAGTTGCGTGACT+TGG 0.530856 7.2:+78315659 MS.gene43171:CDS
AACCAGTTCAGCTGGAACAC+AGG 0.532001 7.2:+78312582 MS.gene43171:CDS
ATCGTAGGAGAGAGCTATGC+CGG 0.540126 7.2:+78313686 MS.gene43171:CDS
AATGGGCCATTTAGGCCTAA+AGG 0.545330 7.2:+78312543 MS.gene43171:CDS
CCACTGTGCCTTACAGGGTG+TGG 0.547254 7.2:+78316365 MS.gene43171:CDS
ATACCAACAATCACGGTTGT+CGG 0.552329 7.2:+78315684 MS.gene43171:CDS
GTCGGCAAGCTAGTCAAGGC+AGG 0.561638 7.2:+78315702 MS.gene43171:CDS
ATAAACTCACCTGAGTATTG+AGG 0.563913 7.2:-78314779 None:intergenic
TTGGAATCACCAATTGGAGT+AGG 0.570704 7.2:+78313183 MS.gene43171:CDS
AAATCAACATGTGGTTGACC+AGG 0.571157 7.2:-78312267 None:intergenic
AGCATAAGCTCAGCCAATTG+AGG 0.572712 7.2:-78314108 None:intergenic
GCCATTTAGGCCTAAAGGAG+AGG 0.574984 7.2:+78312548 MS.gene43171:CDS
CAAATAGCAAGTGACTGAAA+CGG 0.583402 7.2:+78315083 MS.gene43171:intron
CCATTGAGCCAAAGAACAAG+AGG 0.585597 7.2:-78312384 None:intergenic
GAATACCACTGTGCCTTACA+GGG 0.587962 7.2:+78316360 MS.gene43171:CDS
TATGTGAGAGAATACTATAA+CGG 0.590701 7.2:+78314633 MS.gene43171:CDS
TGCAGCAACACACATTGCAA+TGG 0.598224 7.2:-78312187 None:intergenic
CTATCATTTGCAACAGTTAG+GGG 0.601913 7.2:+78316620 MS.gene43171:CDS
ACACCAAGAGAAGAACAACC+AGG 0.602850 7.2:-78312504 None:intergenic
AATAAGATCACAAATTTACC+TGG 0.604906 7.2:+78312249 MS.gene43171:CDS
ATTAGGGTGTGAAACTGCAA+AGG 0.615335 7.2:-78312229 None:intergenic
AGAAGATATACAAACATCAA+GGG 0.621855 7.2:-78314736 None:intergenic
AACCAAAGTCCTCAATACTC+AGG 0.621880 7.2:+78314770 MS.gene43171:CDS
AAAGAGAATTACCTGCTGCA+GGG 0.624612 7.2:-78315204 None:intergenic
GGTTGTCGGCAAGCTAGTCA+AGG 0.630864 7.2:+78315698 MS.gene43171:CDS
ACAACAAAGTAGAGAAGACA+TGG 0.637953 7.2:-78312163 None:intergenic
CTTGGAGATACCAACAATCA+CGG 0.653663 7.2:+78315677 MS.gene43171:CDS
AACTGATGAAAATCAACATG+TGG 0.670035 7.2:-78312276 None:intergenic
AACAGAAGCTTGTTCATCGT+AGG 0.672452 7.2:+78313671 MS.gene43171:CDS
CCACACCCTGTAAGGCACAG+TGG 0.736142 7.2:-78316365 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAACAAAAAATATAATAA+GGG - chr7.2:78316482-78316501 None:intergenic 10.0%
!! TTTGAACAAAAAATATAATA+AGG - chr7.2:78316483-78316502 None:intergenic 10.0%
!!! GTAAAAAAGTTTTTAAAATA+GGG - chr7.2:78312701-78312720 None:intergenic 10.0%
!!! TTTATTTTCATATACAATAT+TGG - chr7.2:78316000-78316019 None:intergenic 10.0%
!!! TTTTTTGTTCAAAATATTAA+TGG + chr7.2:78316490-78316509 MS.gene43171:intron 10.0%
!! AATAAGAAAAGAAGAATAAT+TGG - chr7.2:78314200-78314219 None:intergenic 15.0%
!! CAATTAATTATGATTTATGA+AGG - chr7.2:78316248-78316267 None:intergenic 15.0%
!! TAAAATACAAACTTCAAATT+TGG - chr7.2:78314892-78314911 None:intergenic 15.0%
!!! CGTAAAAAAGTTTTTAAAAT+AGG - chr7.2:78312702-78312721 None:intergenic 15.0%
!!! TATTACTTTGTTTATTTCTT+TGG + chr7.2:78314014-78314033 MS.gene43171:intron 15.0%
!!! TATTTACATTTTACAATTCT+AGG + chr7.2:78313956-78313975 MS.gene43171:intron 15.0%
!!! TTAAAAACTTTTTTACGAAA+AGG + chr7.2:78312705-78312724 MS.gene43171:intron 15.0%
!! ATAGAAATGTTTGAATCAAA+TGG - chr7.2:78313339-78313358 None:intergenic 20.0%
!! ATTATGTTATGCAAAACTTT+AGG - chr7.2:78313453-78313472 None:intergenic 20.0%
!! ATTGTAAAAACTGAAATTGA+AGG - chr7.2:78315009-78315028 None:intergenic 20.0%
!! GTAAATTTGTGATCTTATTA+GGG - chr7.2:78312248-78312267 None:intergenic 20.0%
!! TGAAAAGTTAAATTTACATC+TGG - chr7.2:78316184-78316203 None:intergenic 20.0%
!!! AACATGTTTTATGATAAGAA+AGG - chr7.2:78315571-78315590 None:intergenic 20.0%
!!! AGAAACATGATTTTAAATTG+CGG + chr7.2:78315243-78315262 MS.gene43171:intron 20.0%
!!! ATGATAAGTTATTGTTTTAC+CGG - chr7.2:78313708-78313727 None:intergenic 20.0%
!!! GAGAAGTTGTTTAATTTAAA+AGG + chr7.2:78314147-78314166 MS.gene43171:CDS 20.0%
!!! GTGTTTTGTAATTTATCATT+AGG + chr7.2:78314075-78314094 MS.gene43171:intron 20.0%
!!! TCTTACTTATTACATGTTTT+TGG + chr7.2:78315764-78315783 MS.gene43171:intron 20.0%
!!! TTAAGTTGTTTATTCAAACA+TGG + chr7.2:78312902-78312921 MS.gene43171:intron 20.0%
!!! TTATTCTAAGATCAAATAGA+AGG - chr7.2:78313284-78313303 None:intergenic 20.0%
!!! TTTAAAATCATGTTTCTTGT+AGG - chr7.2:78315240-78315259 None:intergenic 20.0%
!!! TTTAGAATAATCTTGTGAAT+AGG + chr7.2:78315917-78315936 MS.gene43171:intron 20.0%
! AAAACCAAGACAAATCTTTA+AGG - chr7.2:78313566-78313585 None:intergenic 25.0%
! AAATGAAACCAACACATTAA+TGG - chr7.2:78313094-78313113 None:intergenic 25.0%
! AATAAGATCACAAATTTACC+TGG + chr7.2:78312249-78312268 MS.gene43171:CDS 25.0%
! ACAAATTCTACATTGAAATC+TGG + chr7.2:78315488-78315507 MS.gene43171:intron 25.0%
! ACATGACAGAATTTAGTAAA+AGG - chr7.2:78313422-78313441 None:intergenic 25.0%
! AGAAGATATACAAACATCAA+GGG - chr7.2:78314739-78314758 None:intergenic 25.0%
! ATACAAAATTAGTGTAGACA+AGG - chr7.2:78312629-78312648 None:intergenic 25.0%
! GGTAAATTTGTGATCTTATT+AGG - chr7.2:78312249-78312268 None:intergenic 25.0%
! TAAATAAACTAAACCATGCA+TGG - chr7.2:78312731-78312750 None:intergenic 25.0%
! TAGAACTTTAGTACATCAAT+TGG + chr7.2:78316321-78316340 MS.gene43171:CDS 25.0%
! TATGTGAGAGAATACTATAA+CGG + chr7.2:78314633-78314652 MS.gene43171:CDS 25.0%
! TCATTGAACAAAGTTTATGT+AGG + chr7.2:78312983-78313002 MS.gene43171:intron 25.0%
! TCTATAAGGACTAAATACTT+GGG - chr7.2:78312947-78312966 None:intergenic 25.0%
! TTAAATTTACATCTGGACTA+AGG - chr7.2:78316177-78316196 None:intergenic 25.0%
! TTATCATTGAATAAACACAC+CGG + chr7.2:78313721-78313740 MS.gene43171:intron 25.0%
! TTCTATAAGGACTAAATACT+TGG - chr7.2:78312948-78312967 None:intergenic 25.0%
! TTTCAAATTATTAGCTGTGT+CGG - chr7.2:78313769-78313788 None:intergenic 25.0%
!! AAATGTCTGTAAATTTTGTC+TGG + chr7.2:78312668-78312687 MS.gene43171:intron 25.0%
!! CTCAATTCTATTCTTTTGAA+TGG + chr7.2:78313306-78313325 MS.gene43171:intron 25.0%
!!! AAAGTCAAAGTATTTTCATG+AGG - chr7.2:78316030-78316049 None:intergenic 25.0%
!!! AACATAATTGCTTGTTTTAG+TGG + chr7.2:78315824-78315843 MS.gene43171:intron 25.0%
!!! AATAGGTTGAAAACATCTTT+TGG - chr7.2:78315965-78315984 None:intergenic 25.0%
!!! TTGAAAAATTTGTTTTGCAG+TGG + chr7.2:78316265-78316284 MS.gene43171:intron 25.0%
!!! TTGTTTCATGTTGTTTTGAA+GGG + chr7.2:78312481-78312500 MS.gene43171:intron 25.0%
!!! TTTGTTTCATGTTGTTTTGA+AGG + chr7.2:78312480-78312499 MS.gene43171:intron 25.0%
AAAACAACACTATTATGCAG+TGG - chr7.2:78313523-78313542 None:intergenic 30.0%
AACTGATGAAAATCAACATG+TGG - chr7.2:78312279-78312298 None:intergenic 30.0%
AACTTTATGGAAACGACTTA+TGG - chr7.2:78312820-78312839 None:intergenic 30.0%
ACATAAGCGCTTATCATATA+AGG - chr7.2:78316090-78316109 None:intergenic 30.0%
ACCAACACATTAATGGAAAT+TGG - chr7.2:78313087-78313106 None:intergenic 30.0%
ACTATCATTTGCAACAGTTA+GGG + chr7.2:78316619-78316638 MS.gene43171:CDS 30.0%
AGACTGTCAATTATCTTAAC+AGG + chr7.2:78315127-78315146 MS.gene43171:CDS 30.0%
AGACTGTTTGGAAGAATTTA+TGG + chr7.2:78312776-78312795 MS.gene43171:intron 30.0%
ATAAACCAGAAAGAAAAAGC+TGG - chr7.2:78314266-78314285 None:intergenic 30.0%
ATCTAATCTTCTTGCAAAAC+TGG + chr7.2:78313624-78313643 MS.gene43171:CDS 30.0%
CAATTCACATTTACACACAA+TGG - chr7.2:78313143-78313162 None:intergenic 30.0%
CAGAAGATATACAAACATCA+AGG - chr7.2:78314740-78314759 None:intergenic 30.0%
CAGCAATAAGGTTTAAATTG+AGG - chr7.2:78315343-78315362 None:intergenic 30.0%
CATAAGCGCTTATCATATAA+GGG - chr7.2:78316089-78316108 None:intergenic 30.0%
CTCATTACACTTGAACAAAT+GGG - chr7.2:78314669-78314688 None:intergenic 30.0%
CTGTTTAAGTCTTTCTTAGA+AGG + chr7.2:78316689-78316708 MS.gene43171:CDS 30.0%
TAAGAAAATCCTACTCCAAT+TGG - chr7.2:78313195-78313214 None:intergenic 30.0%
TACTATCATTTGCAACAGTT+AGG + chr7.2:78316618-78316637 MS.gene43171:CDS 30.0%
TATATGTAGACAACTAGACA+TGG - chr7.2:78316223-78316242 None:intergenic 30.0%
TATGCTCCAATTCAACAAAA+AGG + chr7.2:78314125-78314144 MS.gene43171:CDS 30.0%
TCCAATTTCCATTAATGTGT+TGG + chr7.2:78313083-78313102 MS.gene43171:intron 30.0%
TGTACCTTAAAGATTTGTCT+TGG + chr7.2:78313559-78313578 MS.gene43171:intron 30.0%
TTCAGTGTAATTACAAGTGT+CGG + chr7.2:78313800-78313819 MS.gene43171:intron 30.0%
TTTCACAAACTATTCTTCTG+AGG - chr7.2:78315889-78315908 None:intergenic 30.0%
TTTCTAAACCTCTTGTTCTT+TGG + chr7.2:78312376-78312395 MS.gene43171:CDS 30.0%
! ACTTCTCCTTTTTGTTGAAT+TGG - chr7.2:78314134-78314153 None:intergenic 30.0%
! AGTAGGATTTTCTTATTCGA+CGG + chr7.2:78313200-78313219 MS.gene43171:CDS 30.0%
! ATGCAAAACTTTAGGAGAAA+GGG - chr7.2:78313445-78313464 None:intergenic 30.0%
! CATCACCTTTTTCTTTATGT+TGG + chr7.2:78314238-78314257 MS.gene43171:intron 30.0%
! GTGTCTATTTTGCTTCTATA+AGG - chr7.2:78312961-78312980 None:intergenic 30.0%
! TATGCAAAACTTTAGGAGAA+AGG - chr7.2:78313446-78313465 None:intergenic 30.0%
! TGGGCTAATAACACTTATTT+TGG - chr7.2:78312928-78312947 None:intergenic 30.0%
! TTGGTGCATTTTCAGAAAAT+GGG + chr7.2:78312526-78312545 MS.gene43171:CDS 30.0%
!! AAGTAACTTGTGACTTTTAC+TGG + chr7.2:78315863-78315882 MS.gene43171:intron 30.0%
!! CAATCAAGTTTAAAGTACTG+AGG + chr7.2:78315025-78315044 MS.gene43171:intron 30.0%
!! GTTGATTTTCATCAGTTTTC+AGG + chr7.2:78312282-78312301 MS.gene43171:CDS 30.0%
!! TACTTGTTTCTGTACTAACT+TGG - chr7.2:78314692-78314711 None:intergenic 30.0%
!!! ATAATCTCGCTCTTATTTTC+AGG + chr7.2:78316565-78316584 MS.gene43171:intron 30.0%
AAAGTTCTACTTCCAGTCAA+TGG - chr7.2:78316310-78316329 None:intergenic 35.0%
AATGTCGAAGACACGTTTAA+AGG + chr7.2:78313918-78313937 MS.gene43171:intron 35.0%
ACGGATACTTCAACTTATGA+AGG + chr7.2:78313219-78313238 MS.gene43171:CDS 35.0%
ACTTGAACAAATGGGAGAAA+CGG - chr7.2:78314661-78314680 None:intergenic 35.0%
AGAGGCAAATATGTTGTACT+TGG + chr7.2:78313164-78313183 MS.gene43171:intron 35.0%
AGGTCATTATGTTCCTCAAT+TGG + chr7.2:78314095-78314114 MS.gene43171:intron 35.0%
AGTCGTTTCCATAAAGTTCT+CGG + chr7.2:78312822-78312841 MS.gene43171:intron 35.0%
ATATTGACATGTGTGACATG+CGG + chr7.2:78314373-78314392 MS.gene43171:intron 35.0%
ATCTGATTGGAGTACATAGA+TGG + chr7.2:78315178-78315197 MS.gene43171:CDS 35.0%
ATTGGAGAGCTCATGAAAAT+AGG - chr7.2:78315982-78316001 None:intergenic 35.0%
ATTTAGATCGAAGTCATGTC+CGG + chr7.2:78314321-78314340 MS.gene43171:intron 35.0%
CAAATAGCAAGTGACTGAAA+CGG + chr7.2:78315083-78315102 MS.gene43171:intron 35.0%
CAAGAAGATTAGATTATCCC+TGG - chr7.2:78313618-78313637 None:intergenic 35.0%
CAATATCAACAAAGCACGAT+AGG - chr7.2:78316412-78316431 None:intergenic 35.0%
CAATTCAAATTCAAGAGGCA+AGG - chr7.2:78315368-78315387 None:intergenic 35.0%
CTATCATTTGCAACAGTTAG+GGG + chr7.2:78316620-78316639 MS.gene43171:CDS 35.0%
CTTTATGTCAATCAGTGTGT+TGG + chr7.2:78315638-78315657 MS.gene43171:intron 35.0%
GATTCAGTTATTCCATTGAC+TGG + chr7.2:78316295-78316314 MS.gene43171:CDS 35.0%
GCTCATTACACTTGAACAAA+TGG - chr7.2:78314670-78314689 None:intergenic 35.0%
GGGCATTTAACTATATGTGT+CGG - chr7.2:78316462-78316481 None:intergenic 35.0%
GGTGTAAATGACAAGATTAC+AGG + chr7.2:78313240-78313259 MS.gene43171:CDS 35.0%
TACTCAGGTGAGTTTATCAT+CGG + chr7.2:78314785-78314804 MS.gene43171:intron 35.0%
TGGCACCAACATAAAGAAAA+AGG - chr7.2:78314246-78314265 None:intergenic 35.0%
TGTCTTTCTCTTTATAGCCA+GGG + chr7.2:78313598-78313617 MS.gene43171:intron 35.0%
TGTGTAAATGTGAATTGCAG+AGG + chr7.2:78313146-78313165 MS.gene43171:intron 35.0%
TTCTTATTCTTGCTAGTGCT+AGG + chr7.2:78314212-78314231 MS.gene43171:intron 35.0%
TTGTACTTGGAATCACCAAT+TGG + chr7.2:78313177-78313196 MS.gene43171:CDS 35.0%
TTGTCTTTCTCTTTATAGCC+AGG + chr7.2:78313597-78313616 MS.gene43171:intron 35.0%
TTTCAGAAAATGGGCCATTT+AGG + chr7.2:78312535-78312554 MS.gene43171:CDS 35.0%
! ATAAACTCACCTGAGTATTG+AGG - chr7.2:78314782-78314801 None:intergenic 35.0%
! ATTCAAGAGCTGAGTTCTTT+TGG + chr7.2:78314547-78314566 MS.gene43171:CDS 35.0%
! GTTGGTGCATTTTCAGAAAA+TGG + chr7.2:78312525-78312544 MS.gene43171:CDS 35.0%
!! AAGCTTCTGTTTCTGTATTC+AGG - chr7.2:78313662-78313681 None:intergenic 35.0%
!! AGCTTCTGTTTCTGTATTCA+GGG - chr7.2:78313661-78313680 None:intergenic 35.0%
!! TCTGTTGCAAATTCTAGAAC+TGG - chr7.2:78314522-78314541 None:intergenic 35.0%
!!! TAATTGCTTGTTTTAGTGGC+TGG + chr7.2:78315828-78315847 MS.gene43171:intron 35.0%
AAAGAGAATTACCTGCTGCA+GGG - chr7.2:78315207-78315226 None:intergenic 40.0%
AAATCAACATGTGGTTGACC+AGG - chr7.2:78312270-78312289 None:intergenic 40.0%
AACCAAAGTCCTCAATACTC+AGG + chr7.2:78314770-78314789 MS.gene43171:CDS 40.0%
ACATACCTGTAGACCAAAAC+TGG - chr7.2:78315732-78315751 None:intergenic 40.0%
AGCTATCTCCGAGAACTTTA+TGG - chr7.2:78312833-78312852 None:intergenic 40.0%
ATACCAACAATCACGGTTGT+CGG + chr7.2:78315684-78315703 MS.gene43171:CDS 40.0%
ATCCGTGCATTCAGATACAT+TGG - chr7.2:78314984-78315003 None:intergenic 40.0%
ATTAGGGTGTGAAACTGCAA+AGG - chr7.2:78312232-78312251 None:intergenic 40.0%
CACACATGTCAATATCGTGT+TGG - chr7.2:78314368-78314387 None:intergenic 40.0%
CACCAATGTATCTGAATGCA+CGG + chr7.2:78314979-78314998 MS.gene43171:intron 40.0%
CTTGGAGATACCAACAATCA+CGG + chr7.2:78315677-78315696 MS.gene43171:CDS 40.0%
GCAGGCAATTCAAATTCAAG+AGG - chr7.2:78315373-78315392 None:intergenic 40.0%
GCTTTACATGCACATCTGAT+TGG + chr7.2:78315165-78315184 MS.gene43171:CDS 40.0%
GTTGATCGATCAAGATTGTG+CGG - chr7.2:78314959-78314978 None:intergenic 40.0%
TCGACATTGTTACCAATGCA+GGG - chr7.2:78313906-78313925 None:intergenic 40.0%
TTCGACATTGTTACCAATGC+AGG - chr7.2:78313907-78313926 None:intergenic 40.0%
TTGGAATCACCAATTGGAGT+AGG + chr7.2:78313183-78313202 MS.gene43171:CDS 40.0%
TTGGTTATCGTTGGACTGTT+TGG - chr7.2:78315519-78315538 None:intergenic 40.0%
! AACAGAAGCTTGTTCATCGT+AGG + chr7.2:78313671-78313690 MS.gene43171:CDS 40.0%
! TTTTACGAAAAGGCCATGCA+TGG + chr7.2:78312715-78312734 MS.gene43171:intron 40.0%
!!! CTTATTTTCAGGTTGGTGGT+TGG + chr7.2:78316576-78316595 MS.gene43171:intron 40.0%
!!! TCTCGCTCTTATTTTCAGGT+TGG + chr7.2:78316569-78316588 MS.gene43171:intron 40.0%
!!! TTTGTTTTGCAGTGGTGATC+AGG + chr7.2:78316273-78316292 MS.gene43171:intron 40.0%
AATGGGCCATTTAGGCCTAA+AGG + chr7.2:78312543-78312562 MS.gene43171:CDS 45.0%
ACACCAAGAGAAGAACAACC+AGG - chr7.2:78312507-78312526 None:intergenic 45.0%
AGCATAAGCTCAGCCAATTG+AGG - chr7.2:78314111-78314130 None:intergenic 45.0%
CAAAGAGAATTACCTGCTGC+AGG - chr7.2:78315208-78315227 None:intergenic 45.0%
CACTGACACATGTTTGACAC+CGG - chr7.2:78314343-78314362 None:intergenic 45.0%
CATTGTTACCAATGCAGGGA+CGG - chr7.2:78313902-78313921 None:intergenic 45.0%
CCATTGAGCCAAAGAACAAG+AGG - chr7.2:78312387-78312406 None:intergenic 45.0%
CGTGCATTCAGATACATTGG+TGG - chr7.2:78314981-78315000 None:intergenic 45.0%
CTAACCAAAGCCTCTCCTTT+AGG - chr7.2:78312561-78312580 None:intergenic 45.0%
GAATACCACTGTGCCTTACA+GGG + chr7.2:78316360-78316379 MS.gene43171:CDS 45.0%
GATCTCTCAGGCTGTGAAAA+GGG - chr7.2:78316662-78316681 None:intergenic 45.0%
GGATTATGAGTTGCGTGACT+TGG + chr7.2:78315659-78315678 MS.gene43171:CDS 45.0%
GGTGAGTTTATCATCGGATC+TGG + chr7.2:78314791-78314810 MS.gene43171:intron 45.0%
GGTGGTTGGACTCAAGTTTA+TGG + chr7.2:78316590-78316609 MS.gene43171:CDS 45.0%
TCCAACGATAACCAATGTGC+CGG + chr7.2:78315524-78315543 MS.gene43171:intron 45.0%
TGAATACCACTGTGCCTTAC+AGG + chr7.2:78316359-78316378 MS.gene43171:CDS 45.0%
TGCAGCAACACACATTGCAA+TGG - chr7.2:78312190-78312209 None:intergenic 45.0%
! CCTCTTGTTCTTTGGCTCAA+TGG + chr7.2:78312384-78312403 MS.gene43171:CDS 45.0%
! CTAAAGGAGAGGCTTTGGTT+AGG + chr7.2:78312559-78312578 MS.gene43171:CDS 45.0%
! CTTGTTCTTTGGCTCAATGG+AGG + chr7.2:78312387-78312406 MS.gene43171:CDS 45.0%
! GAAGCACTTGTGAGACTGTT+TGG + chr7.2:78312764-78312783 MS.gene43171:intron 45.0%
! GAGTTTGCTTTCATGCAGCT+TGG + chr7.2:78314492-78314511 MS.gene43171:intron 45.0%
! GCTGAGTTCTTTTGGTCTCA+TGG + chr7.2:78314555-78314574 MS.gene43171:CDS 45.0%
! GGTTGTTCTTCTCTTGGTGT+TGG + chr7.2:78312507-78312526 MS.gene43171:CDS 45.0%
!! CACCTGAGTATTGAGGACTT+TGG - chr7.2:78314775-78314794 None:intergenic 45.0%
!! CATGGAATTGTGTTGACTGC+AGG - chr7.2:78315391-78315410 None:intergenic 45.0%
!! GAGTTCCAGTTTTGGTCTAC+AGG + chr7.2:78315724-78315743 MS.gene43171:CDS 45.0%
!! TACAAGTGTCGGTGTCGTAT+CGG + chr7.2:78313811-78313830 MS.gene43171:intron 45.0%
!! TATATGTGTCGGTGTCGTGT+AGG - chr7.2:78316451-78316470 None:intergenic 45.0%
!! TGGTGCCAGCTTTTTCTTTC+TGG + chr7.2:78314258-78314277 MS.gene43171:intron 45.0%
!!! CGCTCTTATTTTCAGGTTGG+TGG + chr7.2:78316572-78316591 MS.gene43171:intron 45.0%
!!! TCATGTTGTTTTGAAGGGCC+TGG + chr7.2:78312486-78312505 MS.gene43171:intron 45.0%
!! ACTTAAAAAAAAAAAAAAAT+TGG + chr7.2:78313011-78313030 MS.gene43171:intron 5.0%
!!! TTAATCTTTTTATTATATTA+TGG + chr7.2:78313057-78313076 MS.gene43171:intron 5.0%
AACAGCACAAGCGATCTCTC+AGG - chr7.2:78316674-78316693 None:intergenic 50.0%
AACCAGTTCAGCTGGAACAC+AGG + chr7.2:78312582-78312601 MS.gene43171:CDS 50.0%
AGAGGCAAGGCACAGCAATA+AGG - chr7.2:78315355-78315374 None:intergenic 50.0%
ATCGTAGGAGAGAGCTATGC+CGG + chr7.2:78313686-78313705 MS.gene43171:CDS 50.0%
CGATCTCTCAGGCTGTGAAA+AGG - chr7.2:78316663-78316682 None:intergenic 50.0%
GCACGATAGGATTCACCTGT+TGG - chr7.2:78316399-78316418 None:intergenic 50.0%
GCCATTTAGGCCTAAAGGAG+AGG + chr7.2:78312548-78312567 MS.gene43171:CDS 50.0%
GCCTCTCCTTTAGGCCTAAA+TGG - chr7.2:78312552-78312571 None:intergenic 50.0%
TAAACACACCGGACACGACA+CGG + chr7.2:78313732-78313751 MS.gene43171:intron 50.0%
TAGGCCTAAAGGAGAGGCTT+TGG + chr7.2:78312554-78312573 MS.gene43171:CDS 50.0%
TATGAAGCACGGACACTCCT+CGG - chr7.2:78313878-78313897 None:intergenic 50.0%
TGGTTAGGAACCAGTTCAGC+TGG + chr7.2:78312574-78312593 MS.gene43171:CDS 50.0%
TTGCCGACAACCGTGATTGT+TGG - chr7.2:78315690-78315709 None:intergenic 50.0%
! CAAGGCAGGAGTTCCAGTTT+TGG + chr7.2:78315716-78315735 MS.gene43171:CDS 50.0%
! CGGTGTCAAACATGTGTCAG+TGG + chr7.2:78314341-78314360 MS.gene43171:intron 50.0%
! GTTCTTTGGCTCAATGGAGG+TGG + chr7.2:78312390-78312409 MS.gene43171:intron 50.0%
ATAGATGGTCTCCCTGCAGC+AGG + chr7.2:78315193-78315212 MS.gene43171:CDS 55.0%
CACCTGTGTTCCAGCTGAAC+TGG - chr7.2:78312587-78312606 None:intergenic 55.0%
CATGCAGTCAGGCACATTGG+CGG + chr7.2:78314842-78314861 MS.gene43171:intron 55.0%
CATTCACACAGCCGGCACAT+TGG - chr7.2:78315538-78315557 None:intergenic 55.0%
CCATGCAGTCAGCACATCAG+TGG + chr7.2:78315406-78315425 MS.gene43171:intron 55.0%
CCTGCAAACCACACCCTGTA+AGG - chr7.2:78316376-78316395 None:intergenic 55.0%
CTCCCACACATTCACACAGC+CGG - chr7.2:78315546-78315565 None:intergenic 55.0%
CTGCATGCAGTCAGGCACAT+TGG + chr7.2:78314839-78314858 MS.gene43171:intron 55.0%
CTTCATAGCCGTCCCTGCAT+TGG + chr7.2:78313891-78313910 MS.gene43171:intron 55.0%
GAGGTGTGCAACTGCGATTC+TGG - chr7.2:78315324-78315343 None:intergenic 55.0%
GGGCCTGGTTGTTCTTCTCT+TGG + chr7.2:78312501-78312520 MS.gene43171:intron 55.0%
GGTTGTCGGCAAGCTAGTCA+AGG + chr7.2:78315698-78315717 MS.gene43171:CDS 55.0%
TGCCTGACTGCATGCAGTCA+CGG - chr7.2:78314836-78314855 None:intergenic 55.0%
! CCTTACAGGGTGTGGTTTGC+AGG + chr7.2:78316373-78316392 MS.gene43171:CDS 55.0%
! GCCGGCACATTGGTTATCGT+TGG - chr7.2:78315528-78315547 None:intergenic 55.0%
! TGCCGGCTGTGTGAATGTGT+GGG + chr7.2:78315541-78315560 MS.gene43171:intron 55.0%
!! CCACTGATGTGCTGACTGCA+TGG - chr7.2:78315409-78315428 None:intergenic 55.0%
!! GTCGGTGTCGTGTAGGACAT+TGG - chr7.2:78316444-78316463 None:intergenic 55.0%
!! TGTCGGTGTCGTATCGGTGT+CGG + chr7.2:78313817-78313836 MS.gene43171:intron 55.0%
ACACGACACGTGTCCGACAC+CGG + chr7.2:78313840-78313859 MS.gene43171:intron 60.0%
CCACACCCTGTAAGGCACAG+TGG - chr7.2:78316368-78316387 None:intergenic 60.0%
CCACTGTGCCTTACAGGGTG+TGG + chr7.2:78316365-78316384 MS.gene43171:CDS 60.0%
GATTAGGCGTGTCCCGGTGT+CGG - chr7.2:78313856-78313875 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+AGG - chr7.2:78313872-78313891 None:intergenic 60.0%
GCAGGGACGGCTATGAAGCA+CGG - chr7.2:78313889-78313908 None:intergenic 60.0%
GCCTGACTGCATGCAGTCAC+GGG - chr7.2:78314835-78314854 None:intergenic 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG - chr7.2:78313743-78313762 None:intergenic 60.0%
GTCGGCAAGCTAGTCAAGGC+AGG + chr7.2:78315702-78315721 MS.gene43171:CDS 60.0%
TCCCGTGACTGCATGCAGTC+AGG + chr7.2:78314831-78314850 MS.gene43171:intron 60.0%
! GGTGTGGTTTGCAGGCCAAC+AGG + chr7.2:78316381-78316400 MS.gene43171:CDS 60.0%
! TCCTCGGATTAGGCGTGTCC+CGG - chr7.2:78313862-78313881 None:intergenic 60.0%
!! GTGCCGGCTGTGTGAATGTG+TGG + chr7.2:78315540-78315559 MS.gene43171:intron 60.0%
ACCGGGACACGCCTAATCCG+AGG + chr7.2:78313858-78313877 MS.gene43171:intron 65.0%
CACGACACGTGTCCGACACC+GGG + chr7.2:78313841-78313860 MS.gene43171:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 78312165 78316736 78312165 ID=MS.gene43171
chr7.2 mRNA 78312165 78316736 78312165 ID=MS.gene43171.t1;Parent=MS.gene43171
chr7.2 exon 78312165 78312408 78312165 ID=MS.gene43171.t1.exon1;Parent=MS.gene43171.t1
chr7.2 CDS 78312165 78312408 78312165 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78312502 78312603 78312502 ID=MS.gene43171.t1.exon2;Parent=MS.gene43171.t1
chr7.2 CDS 78312502 78312603 78312502 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78313166 78313261 78313166 ID=MS.gene43171.t1.exon3;Parent=MS.gene43171.t1
chr7.2 CDS 78313166 78313261 78313166 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78313615 78313707 78313615 ID=MS.gene43171.t1.exon4;Parent=MS.gene43171.t1
chr7.2 CDS 78313615 78313707 78313615 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78314097 78314176 78314097 ID=MS.gene43171.t1.exon5;Parent=MS.gene43171.t1
chr7.2 CDS 78314097 78314176 78314097 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78314510 78314791 78314510 ID=MS.gene43171.t1.exon6;Parent=MS.gene43171.t1
chr7.2 CDS 78314510 78314791 78314510 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78315090 78315214 78315090 ID=MS.gene43171.t1.exon7;Parent=MS.gene43171.t1
chr7.2 CDS 78315090 78315214 78315090 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78315653 78315745 78315653 ID=MS.gene43171.t1.exon8;Parent=MS.gene43171.t1
chr7.2 CDS 78315653 78315745 78315653 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78316285 78316402 78316285 ID=MS.gene43171.t1.exon9;Parent=MS.gene43171.t1
chr7.2 CDS 78316285 78316402 78316285 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
chr7.2 exon 78316587 78316736 78316587 ID=MS.gene43171.t1.exon10;Parent=MS.gene43171.t1
chr7.2 CDS 78316587 78316736 78316587 ID=cds.MS.gene43171.t1;Parent=MS.gene43171.t1
Gene Sequence

>MS.gene43171

ATGTCTTCTCTACTTTGTTGTTCCATTGCAATGTGTGTTGCTGCAATTGTACTTCAACAATGTTCCTTTGCAGTTTCACACCCTAATAAGATCACAAATTTACCTGGTCAACCACATGTTGATTTTCATCAGTTTTCAGGCTATGTAAATGTTGATGATCAAAACAAAAAAGCACTCTTTTTCTACTTTGTTGAAGCTCAGAATGATGCTGTTTCTAAACCTCTTGTTCTTTGGCTCAATGGAGGTGGTTTTTAGTTTTTGTTTCTTTTATTAGTAACATTGATTCTCATCACTCACATAGATGAAAAATTGAACTTTGTTTCATGTTGTTTTGAAGGGCCTGGTTGTTCTTCTCTTGGTGTTGGTGCATTTTCAGAAAATGGGCCATTTAGGCCTAAAGGAGAGGCTTTGGTTAGGAACCAGTTCAGCTGGAACACAGGTGTGTACTTTCATCAATCAAACCTTGTCTACACTAATTTTGTATTAGCACAACTTTTGAAGTTAAATGTCTGTAAATTTTGTCTGGTTTTAGTCCCTATTTTAAAAACTTTTTTACGAAAAGGCCATGCATGGTTTAGTTTATTTAAGCTTATTTACAAGAAGCACTTGTGAGACTGTTTGGAAGAATTTATGGAAACAACTTATGAAATGTCCATAAGTCGTTTCCATAAAGTTCTCGGAGATAGCTTTTGAAAATAGCTTATAGTGTATAGAAGAATTTATATGATTAGTGTTGATTAAGTTGTTTATTCAAACATGGCCAAAATAAGTGTTATTAGCCCAAGTATTTAGTCCTTATAGAAGCAAAATAGACACTATCATTGAACAAAGTTTATGTAGGACTAAACTTAAAAAAAAAAAAAAATTGGATTTGATAAGACTACAAACATATTTAATCTTTTTATTATATTATGGTTTTCCAATTTCCATTAATGTGTTGGTTTCATTTTTAGCTTAACAATGACAAACTCATAACCATTGTGTGTAAATGTGAATTGCAGAGGCAAATATGTTGTACTTGGAATCACCAATTGGAGTAGGATTTTCTTATTCGACGGATACTTCAACTTATGAAGGTGTAAATGACAAGATTACAGGCAAGTTTTCAATTTTCATCCTTCTATTTGATCTTAGAATAATTCTCAATTCTATTCTTTTGAATGGTCAAGCACCATTTGATTCAAACATTTCTATGTTACTAAAGATAAATTTATTTGTTTCTCTATCTCTCTTTTTCTTTTCTTGTACTCTTTACCTTTTACTAAATTCTGTCATGTCCCTTTCTCCTAAAGTTTTGCATAACATAATGTTATTTCACTATCTACTCTTTTACTTTAATGTTATGTATGTTATGTCCACTGCATAATAGTGTTGTTTTTCTTGCAGACATGTCATGTACCTTAAAGATTTGTCTTGGTTTTCTGAAATTATTTTGTCTTTCTCTTTATAGCCAGGGATAATCTAATCTTCTTGCAAAACTGGTTTGTGAAGTTCCCTGAATACAGAAACAGAAGCTTGTTCATCGTAGGAGAGAGCTATGCCGGTAAAACAATAACTTATCATTGAATAAACACACCGGACACGACACGGACACTGACACGCCGACACAGCTAATAATTTGAAAAAATCACATAATTCAGTGTAATTACAAGTGTCGGTGTCGTATCGGTGTCGGACACGACACGTGTCCGACACCGGGACACGCCTAATCCGAGGAGTGTCCGTGCTTCATAGCCGTCCCTGCATTGGTAACAATGTCGAAGACACGTTTAAAGGAATCAAGATGAATTTTATTTACATTTTACAATTCTAGGCATCATTTTGAAATATTTAATATTTACTCATTTATTATTACTTTGTTTATTTCTTTGGTGAAGTTGAGATAATAACATAATTATGCAGCTAATGATGTGTTTTGTAATTTATCATTAGGTCATTATGTTCCTCAATTGGCTGAGCTTATGCTCCAATTCAACAAAAAGGAGAAGTTGTTTAATTTAAAAGGCATTGCTGTAAGTTAAAGCACAAACTTCCAATTATTCTTCTTTTCTTATTCTTGCTAGTGCTAGGCTTCATCACCTTTTTCTTTATGTTGGTGCCAGCTTTTTCTTTCTGGTTTATGTAAAAGTAACTGAAGAAAACTAAATACTACTAAAATTTAGATCGAAGTCATGTCCGGTGTCAAACATGTGTCAGTGGTCCAACACGATATTGACATGTGTGACATGCGGTTACATTCAATCACTTTTTATTTTCTTAATTTACTACAAGTGTTTACGTGTCAATGTGAGTATCGTGTTTGTATCAGTGCTTTTGTTGTAGCTAACGAGTTTGCTTTCATGCAGCTTGGTAATCCAGTTCTAGAATTTGCAACAGACTTTAATTCAAGAGCTGAGTTCTTTTGGTCTCATGGATTGATCTCAGACTTAACATTTAAAATGTTCACTTCAGTTTGTAACTATTCAAGATATGTGAGAGAATACTATAACGGTGCCGTTTCTCCCATTTGTTCAAGTGTAATGAGCCAAGTTAGTACAGAAACAAGTAGATTTGTTGACAAGTATGATGTGACCCTTGATGTTTGTATATCTTCTGTGTTTTCACAAACCAAAGTCCTCAATACTCAGGTGAGTTTATCATCGGATCTGGATTGTGCGCTATCACAATCCCGTGACTGCATGCAGTCAGGCACATTGGCGGTTGTTTAGTCAAATATCACATAGTCCAAATTTGAAGTTTGTATTTTAGATTTTTAAAATAATGCAAAAAAATGTATACGTTGAAATCTAGACCGCACAATCTTGATCGATCAACCACCAATGTATCTGAATGCACGGATGTCCTTCAATTTCAGTTTTTACAATCAAGTTTAAAGTACTGAGGTATGACATGATGCTCGTGTTTTTGTTGTCATTTGTCAAATAGCAAGTGACTGAAACGGTTGATGTATGCGTTGAAGACGAGACTGTCAATTATCTTAACAGGAAAGATGTTCAATCAGCTTTACATGCACATCTGATTGGAGTACATAGATGGTCTCCCTGCAGCAGGTAATTCTCTTTGTATAATGTGCCTACAAGAAACATGATTTTAAATTGCGGTTGCAATTGCAGTCGCGATACAGTTACAAAATATCTTCAAATCTGTATTCTGCGACCAGAATCGCAGTTGCACACCTCAATTTAAACCTTATTGCTGTGCCTTGCCTCTTGAATTTGAATTGCCTGCAGTCAACACAATTCCATGCAGTCAGCACATCAGTGGTCGTTAGATTGTATTAAACGATTCATATTTCAAGCTCTTTATTTAGATTATCTAAAAAAACAAATTCTACATTGAAATCTGGATCGTCCAAACAGTCCAACGATAACCAATGTGCCGGCTGTGTGAATGTGTGGGAGTTCCTTTCTTATCATAAAACATGTTTTTGTTTTTTATAGTACATATATAAGACAGAAATACTTACAATTTTGCTTTATGTCAATCAGTGTGTTGGATTATGAGTTGCGTGACTTGGAGATACCAACAATCACGGTTGTCGGCAAGCTAGTCAAGGCAGGAGTTCCAGTTTTGGTCTACAGGTATGTGCATTCATCATGTCTTACTTATTACATGTTTTTGGAATAAAGATCTTATAGTTTTTTTTAAGTTTTTATCATAACATAATTGCTTGTTTTAGTGGCTGGATACACTTGTAAAAGTAACTTGTGACTTTTACTGGCCTCAGAAGAATAGTTTGTGAAAATAAGCTCTTTAGAATAATCTTGTGAATAGGTACTTACTTATTAATGACGCGTCCAAAAGATGTTTTCAACCTATTTTCATGAGCTCTCCAATATTGTATATGAAAATAAATTTTATACCTCATGAAAATACTTTGACTTTATTTTATCTTTTGCACAAAAATAACTTGCATCTAAACCCTTATATGATAAGCGCTTATGTTATAAGTGCTTAATTAAGTTATTCATCTAAGCAAAGCCTAATTAAGTAATCCATTAAACTTGGTCCTTAGTCCAGATGTAAATTTAACTTTTCACTTAGCATAAACTAGACCATGTCTAGTTGTCTACATATAAGCCTTCATAAATCATAATTAATTGAAAAATTTGTTTTGCAGTGGTGATCAGGATTCAGTTATTCCATTGACTGGAAGTAGAACTTTAGTACATCAATTGGCAAAACAGCTGAGAATGAATACCACTGTGCCTTACAGGGTGTGGTTTGCAGGCCAACAGGTGAATCCTATCGTGCTTTGTTGATATTGAACATGTGTCCAATGTCCTACACGACACCGACACATATAGTTAAATGCCCTTATTATATTTTTTGTTCAAAATATTAATGGTATCGACGTGTTAGAGTCATGTCTCGTGTATGTGTCTATGTCGTGCTTAAGAATAATCTCGCTCTTATTTTCAGGTTGGTGGTTGGACTCAAGTTTATGGCAACATACTATCATTTGCAACAGTTAGGGGAGCATCACATGAAGTACCCTTTTCACAGCCTGAGAGATCGCTTGTGCTGTTTAAGTCTTTCTTAGAAGGAAGACCTCTACCAGAAGAATTTTGA
Protein sequence

>MS.gene43171.t1

MSSLLCCSIAMCVAAIVLQQCSFAVSHPNKITNLPGQPHVDFHQFSGYVNVDDQNKKALFFYFVEAQNDAVSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVRNQFSWNTEANMLYLESPIGVGFSYSTDTSTYEGVNDKITARDNLIFLQNWFVKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDLTFKMFTSVCNYSRYVREYYNGAVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNTQQVTETVDVCVEDETVNYLNRKDVQSALHAHLIGVHRWSPCSSVLDYELRDLEIPTITVVGKLVKAGVPVLVYSGDQDSVIPLTGSRTLVHQLAKQLRMNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGRPLPEEF