Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011132.t1 | XP_013444251.1 | 98.6 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 1.10E-68 | 269.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011132.t1 | Q9M0E2 | 72.7 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 1.5e-50 | 200.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011132.t1 | I3TAF1 | 98.6 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 7.7e-69 | 269.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018074 | MS.gene011132 | PPI |
| MS.gene069908 | MS.gene011132 | PPI |
| MS.gene011132 | MS.gene018749 | PPI |
| MS.gene50464 | MS.gene011132 | PPI |
| MS.gene50465 | MS.gene011132 | PPI |
| MS.gene072152 | MS.gene011132 | PPI |
| MS.gene018744 | MS.gene011132 | PPI |
| MS.gene36675 | MS.gene011132 | PPI |
| MS.gene020330 | MS.gene011132 | PPI |
| MS.gene011132 | MS.gene52750 | PPI |
| MS.gene23528 | MS.gene011132 | PPI |
| MS.gene23520 | MS.gene011132 | PPI |
| MS.gene36392 | MS.gene011132 | PPI |
| MS.gene76576 | MS.gene011132 | PPI |
| MS.gene23525 | MS.gene011132 | PPI |
| MS.gene36570 | MS.gene011132 | PPI |
| MS.gene52753 | MS.gene011132 | PPI |
| MS.gene04837 | MS.gene011132 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011132.t1 | MTR_8g015570 | 98.601 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 8.63e-102 | 288 |
| MS.gene011132.t1 | MTR_2g100410 | 91.608 | 143 | 12 | 0 | 1 | 143 | 1 | 143 | 1.39e-95 | 272 |
| MS.gene011132.t1 | MTR_8g015570 | 99.048 | 105 | 1 | 0 | 1 | 105 | 1 | 105 | 1.05e-73 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011132.t1 | AT4G29410 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 2.04e-72 | 213 |
| MS.gene011132.t1 | AT4G29410 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 2.04e-72 | 213 |
| MS.gene011132.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
| MS.gene011132.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
| MS.gene011132.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
Find 37 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGAACAACTCTTTCT+TGG | 0.235683 | 8.3:-73374053 | MS.gene011132:CDS |
| TCTTTCTTGGTGAAGGAGTT+TGG | 0.288497 | 8.3:-73374040 | MS.gene011132:CDS |
| GAAGGCTTGTTCTGCTTCCT+TGG | 0.330285 | 8.3:+73373058 | None:intergenic |
| CAGTACCAGGGCCACTCATA+TGG | 0.374084 | 8.3:-73374084 | MS.gene011132:CDS |
| AAGAAAATGGCGACAGTACC+AGG | 0.376148 | 8.3:-73374097 | None:intergenic |
| CCTCTTCTTGACACCGGACT+TGG | 0.386828 | 8.3:+73372045 | None:intergenic |
| GGCAAAGGCCGTTCAAAATC+AGG | 0.396746 | 8.3:-73372990 | MS.gene011132:intron |
| CACCGGACTTGGCAACTTTG+AGG | 0.398692 | 8.3:+73372056 | None:intergenic |
| CTCTGCTGAATTGAACACTC+TGG | 0.423197 | 8.3:+73374008 | None:intergenic |
| TAAAGATCAGTCGGTGTTGT+TGG | 0.464399 | 8.3:-73373092 | MS.gene011132:CDS |
| CTTAACTCCTACAAGTTCTC+TGG | 0.474879 | 8.3:-73373965 | MS.gene011132:intron |
| AGAGCTGCCTTCTTCAGATC+AGG | 0.476094 | 8.3:+73372106 | None:intergenic |
| AGCCTCAAAGTTGCCAAGTC+CGG | 0.480021 | 8.3:-73372058 | MS.gene011132:CDS |
| ATCTTTACCAGCAGGCTGAA+TGG | 0.487221 | 8.3:+73373108 | None:intergenic |
| GAACAACTCTTTCTTGGTGA+AGG | 0.490005 | 8.3:-73374047 | MS.gene011132:CDS |
| GAAGAGGAACAGACATGCTT+AGG | 0.493706 | 8.3:-73372029 | None:intergenic |
| ATCTCCCATATGAGTGGCCC+TGG | 0.496412 | 8.3:+73374079 | None:intergenic |
| TCACAAATCTATCATGAAGA+AGG | 0.505696 | 8.3:-73373026 | MS.gene011132:CDS |
| GATCATACCAGAGAACTTGT+AGG | 0.529045 | 8.3:+73373958 | None:intergenic |
| TCTGCTGAATTGAACACTCT+GGG | 0.534078 | 8.3:+73374009 | None:intergenic |
| ACTGTGACCATTCAGCCTGC+TGG | 0.535709 | 8.3:-73373115 | MS.gene011132:CDS |
| AGTACCAGGGCCACTCATAT+GGG | 0.555358 | 8.3:-73374083 | MS.gene011132:CDS |
| TGAAGAAGGCAGCTCTTGCA+AGG | 0.567533 | 8.3:-73372099 | MS.gene011132:CDS |
| CTACAGGCCTGATCTGAAGA+AGG | 0.570064 | 8.3:-73372113 | MS.gene011132:CDS |
| ACCGACTGATCTTTACCAGC+AGG | 0.573968 | 8.3:+73373100 | None:intergenic |
| GGAGTTCCGCAGGATGGCAA+AGG | 0.575137 | 8.3:-73373005 | MS.gene011132:CDS |
| TCATGAAGAAGGAGTTCCGC+AGG | 0.590257 | 8.3:-73373015 | MS.gene011132:CDS |
| CCAAGTCCGGTGTCAAGAAG+AGG | 0.591931 | 8.3:-73372045 | MS.gene011132:CDS |
| GCCTGCTGGTAAAGATCAGT+CGG | 0.593104 | 8.3:-73373101 | MS.gene011132:CDS |
| TCTGTTCCTCTTCTTGACAC+CGG | 0.602415 | 8.3:+73372039 | None:intergenic |
| GATTTGTGAGACAAAGCAGA+AGG | 0.606292 | 8.3:+73373040 | None:intergenic |
| AGGTGGCAGATAATTACTAC+AGG | 0.609077 | 8.3:-73372129 | MS.gene011132:CDS |
| GAACGGCCTTTGCCATCCTG+CGG | 0.614382 | 8.3:+73372999 | None:intergenic |
| TTCACGATCTCCCATATGAG+TGG | 0.628127 | 8.3:+73374073 | None:intergenic |
| GAAGAAGGAGTTCCGCAGGA+TGG | 0.644679 | 8.3:-73373011 | MS.gene011132:CDS |
| AGAAAATGGCGACAGTACCA+GGG | 0.649815 | 8.3:-73374096 | None:intergenic |
| TGTTGGCTACAACTAAGCCA+AGG | 0.697641 | 8.3:-73373075 | MS.gene011132:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTGTTTTTGAAAAT+TGG | - | chr8.3:73372275-73372294 | MS.gene011132:intron | 10.0% |
| !! | AAAGTCAAATCTAAATAATT+AGG | + | chr8.3:73373270-73373289 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAACAATGATAG+TGG | - | chr8.3:73372443-73372462 | MS.gene011132:intron | 15.0% |
| !! | AAAAAAAAACAAGTCTATAC+TGG | - | chr8.3:73373455-73373474 | MS.gene011132:intron | 20.0% |
| !! | AAAAATATGAACTTGATGAA+TGG | + | chr8.3:73373600-73373619 | None:intergenic | 20.0% |
| !! | AAAATATGAACTTGATGAAT+GGG | + | chr8.3:73373599-73373618 | None:intergenic | 20.0% |
| !! | AACTAAAAATCAACCAAAAT+TGG | + | chr8.3:73372699-73372718 | None:intergenic | 20.0% |
| !! | AATGTTATGTTCAAATACTA+AGG | + | chr8.3:73373960-73373979 | None:intergenic | 20.0% |
| !! | TCATATAAAGAAAAAGCAAA+AGG | + | chr8.3:73373519-73373538 | None:intergenic | 20.0% |
| !! | TTAACATAAACTATGTTGAT+TGG | - | chr8.3:73372719-73372738 | MS.gene011132:intron | 20.0% |
| !!! | AAAAATTACCTGATTTTGAA+CGG | + | chr8.3:73373142-73373161 | None:intergenic | 20.0% |
| !!! | AGTTTTATAGAACATATGAA+TGG | - | chr8.3:73373180-73373199 | MS.gene011132:intron | 20.0% |
| !!! | GACTTGTTTTTTTTTTTTCT+AGG | + | chr8.3:73373450-73373469 | None:intergenic | 20.0% |
| !!! | GGTAAAATTTTAATTGATTC+TGG | - | chr8.3:73372543-73372562 | MS.gene011132:intron | 20.0% |
| !!! | GTATTTTAATTGTTTTGTCT+TGG | - | chr8.3:73372589-73372608 | MS.gene011132:intron | 20.0% |
| !!! | TTTTTTGTGATTCTGATAAT+GGG | - | chr8.3:73372195-73372214 | MS.gene011132:intron | 20.0% |
| !!! | TTTTTTGTGTTTCTGATAAT+GGG | - | chr8.3:73372641-73372660 | MS.gene011132:intron | 20.0% |
| ! | AAATGTACTTCAATTGTTAG+TGG | - | chr8.3:73372522-73372541 | MS.gene011132:intron | 25.0% |
| ! | AACAAATTGAAGAATAGCTA+TGG | + | chr8.3:73373333-73373352 | None:intergenic | 25.0% |
| ! | AATGAATCTTTGTGTTTCAA+TGG | - | chr8.3:73372929-73372948 | MS.gene011132:intron | 25.0% |
| ! | AGAATCACAAAAAAGAGAAA+AGG | + | chr8.3:73372189-73372208 | None:intergenic | 25.0% |
| ! | ATAACATTATCATCATAACG+AGG | + | chr8.3:73372319-73372338 | None:intergenic | 25.0% |
| ! | ATATATTTCACTCCTATCAT+AGG | + | chr8.3:73372359-73372378 | None:intergenic | 25.0% |
| ! | ATTGTCTGATTAACATAGTA+CGG | - | chr8.3:73372797-73372816 | MS.gene011132:intron | 25.0% |
| ! | GAATCACAAAAAAGAGAAAA+GGG | + | chr8.3:73372188-73372207 | None:intergenic | 25.0% |
| ! | TATATTTCACTCCTATCATA+GGG | + | chr8.3:73372358-73372377 | None:intergenic | 25.0% |
| ! | TCAATGCATTGTCTTTATAA+AGG | - | chr8.3:73373543-73373562 | MS.gene011132:intron | 25.0% |
| !! | ATGATTTTATGCATTTGTGT+GGG | - | chr8.3:73373376-73373395 | MS.gene011132:intron | 25.0% |
| !!! | AATTTTTTCAAACTCTGGTT+TGG | - | chr8.3:73373155-73373174 | MS.gene011132:intron | 25.0% |
| !!! | CTTTTTTGTGATTCTGATAA+TGG | - | chr8.3:73372194-73372213 | MS.gene011132:intron | 25.0% |
| !!! | GAATCATGTTTTTCAATTGT+TGG | - | chr8.3:73372871-73372890 | MS.gene011132:intron | 25.0% |
| !!! | GTTTTTTGTGTTTCTGATAA+TGG | - | chr8.3:73372640-73372659 | MS.gene011132:intron | 25.0% |
| !!! | TCTTATTTTGTTGCCAATTT+TGG | - | chr8.3:73372683-73372702 | MS.gene011132:intron | 25.0% |
| !!! | TTGAACATAACATTTTGATG+TGG | - | chr8.3:73373966-73373985 | MS.gene011132:CDS | 25.0% |
| !!! | TTTAACAATGATAGTGGTTA+TGG | - | chr8.3:73372449-73372468 | MS.gene011132:intron | 25.0% |
| ACAAATGCATAAAATCATCC+AGG | + | chr8.3:73373374-73373393 | None:intergenic | 30.0% | |
| ACCTATCATACATCAATGTA+AGG | + | chr8.3:73372971-73372990 | None:intergenic | 30.0% | |
| ATATTTCACTCCTATCATAG+GGG | + | chr8.3:73372357-73372376 | None:intergenic | 30.0% | |
| ATTTAAACTTCCCCTATGAT+AGG | - | chr8.3:73372344-73372363 | MS.gene011132:intron | 30.0% | |
| CATTCAAATTTCACTAGCAA+GGG | + | chr8.3:73373481-73373500 | None:intergenic | 30.0% | |
| CTTACAATGTACATGTTCTA+GGG | - | chr8.3:73372618-73372637 | MS.gene011132:intron | 30.0% | |
| TCACAAATCTATCATGAAGA+AGG | - | chr8.3:73373095-73373114 | MS.gene011132:CDS | 30.0% | |
| TCATTCAAATTTCACTAGCA+AGG | + | chr8.3:73373482-73373501 | None:intergenic | 30.0% | |
| TCCTTACATTGATGTATGAT+AGG | - | chr8.3:73372967-73372986 | MS.gene011132:intron | 30.0% | |
| TGAAATATTCATGTTACGCT+TGG | - | chr8.3:73373695-73373714 | MS.gene011132:intron | 30.0% | |
| TTGTGCTAATAGCGAAATAT+AGG | - | chr8.3:73373929-73373948 | MS.gene011132:intron | 30.0% | |
| ! | ATGCAGTTTTTATATCATGG+TGG | - | chr8.3:73373834-73373853 | MS.gene011132:intron | 30.0% |
| ! | GATGATTTTATGCATTTGTG+TGG | - | chr8.3:73373375-73373394 | MS.gene011132:intron | 30.0% |
| ! | GTCATGCAGTTTTTATATCA+TGG | - | chr8.3:73373831-73373850 | MS.gene011132:intron | 30.0% |
| !! | AAGTAGAAGTTTTGCTGATT+TGG | - | chr8.3:73372394-73372413 | MS.gene011132:intron | 30.0% |
| !! | ATAACATTTTGATGTGGTAC+AGG | - | chr8.3:73373972-73373991 | MS.gene011132:CDS | 30.0% |
| !! | TCATGTTTTTCAATTGTTGG+TGG | - | chr8.3:73372874-73372893 | MS.gene011132:intron | 30.0% |
| !! | TGATTCTGATAATGGGTATT+TGG | - | chr8.3:73372202-73372221 | MS.gene011132:intron | 30.0% |
| !!! | AGTAGAAGTTTTGCTGATTT+GGG | - | chr8.3:73372395-73372414 | MS.gene011132:intron | 30.0% |
| !!! | CAGGTAATTTTTTCAAACTC+TGG | - | chr8.3:73373150-73373169 | MS.gene011132:intron | 30.0% |
| !!! | TGATTTTGGTGTTATGTTTC+TGG | - | chr8.3:73373401-73373420 | MS.gene011132:intron | 30.0% |
| AAAAACTGCATGACAGACAA+AGG | + | chr8.3:73373825-73373844 | None:intergenic | 35.0% | |
| ACATTGATGTATGATAGGTC+TGG | - | chr8.3:73372972-73372991 | MS.gene011132:intron | 35.0% | |
| ATATAAGTAGGATCCCTATG+TGG | - | chr8.3:73373662-73373681 | MS.gene011132:intron | 35.0% | |
| CCTAGAACATGTACATTGTA+AGG | + | chr8.3:73372620-73372639 | None:intergenic | 35.0% | |
| CCTTACAATGTACATGTTCT+AGG | - | chr8.3:73372617-73372636 | MS.gene011132:intron | 35.0% | |
| GAAGAAGAACAACTCTTTCT+TGG | - | chr8.3:73372068-73372087 | MS.gene011132:CDS | 35.0% | |
| GGAAACAAGTGAAATACTTG+TGG | + | chr8.3:73373797-73373816 | None:intergenic | 35.0% | |
| TATAAGTAGGATCCCTATGT+GGG | - | chr8.3:73373663-73373682 | MS.gene011132:intron | 35.0% | |
| TCATTGAAGAAACCCACATA+GGG | + | chr8.3:73373678-73373697 | None:intergenic | 35.0% | |
| TTCATTGAAGAAACCCACAT+AGG | + | chr8.3:73373679-73373698 | None:intergenic | 35.0% | |
| ! | GTCTTTATAAAGGCGTAAGA+TGG | - | chr8.3:73373553-73373572 | MS.gene011132:intron | 35.0% |
| ! | TGAGGCTCTAACATATAAGT+AGG | - | chr8.3:73373650-73373669 | MS.gene011132:intron | 35.0% |
| ! | TGCAGCATCATTTTGTAGAA+CGG | + | chr8.3:73373626-73373645 | None:intergenic | 35.0% |
| ! | TTAACATAGTACGGTGTTGA+AGG | - | chr8.3:73372806-73372825 | MS.gene011132:intron | 35.0% |
| ! | TTAATTGATTCTGGTGTGCT+AGG | - | chr8.3:73372552-73372571 | MS.gene011132:intron | 35.0% |
| ! | TTTGTTGTGTTCCCTTGAAA+AGG | - | chr8.3:73373347-73373366 | MS.gene011132:intron | 35.0% |
| AAAATGATGCTGCAGTGATG+AGG | - | chr8.3:73373632-73373651 | MS.gene011132:intron | 40.0% | |
| AGCACAAATCAGAGGAACAT+AGG | + | chr8.3:73373916-73373935 | None:intergenic | 40.0% | |
| AGGTGGCAGATAATTACTAC+AGG | - | chr8.3:73373992-73374011 | MS.gene011132:CDS | 40.0% | |
| CTTAACTCCTACAAGTTCTC+TGG | - | chr8.3:73372156-73372175 | MS.gene011132:intron | 40.0% | |
| GAACAACTCTTTCTTGGTGA+AGG | - | chr8.3:73372074-73372093 | MS.gene011132:CDS | 40.0% | |
| GATCATACCAGAGAACTTGT+AGG | + | chr8.3:73372166-73372185 | None:intergenic | 40.0% | |
| GATTTGTGAGACAAAGCAGA+AGG | + | chr8.3:73373084-73373103 | None:intergenic | 40.0% | |
| TCGCTATTAGCACAAATCAG+AGG | + | chr8.3:73373924-73373943 | None:intergenic | 40.0% | |
| TCTGCTGAATTGAACACTCT+GGG | + | chr8.3:73372115-73372134 | None:intergenic | 40.0% | |
| TCTTTCTTGGTGAAGGAGTT+TGG | - | chr8.3:73372081-73372100 | MS.gene011132:CDS | 40.0% | |
| ! | AATCATCCAGGTCCTTTTCA+AGG | + | chr8.3:73373362-73373381 | None:intergenic | 40.0% |
| ! | ATCATCCAGGTCCTTTTCAA+GGG | + | chr8.3:73373361-73373380 | None:intergenic | 40.0% |
| ! | CATTTGTGTGGGTGTGATTT+TGG | - | chr8.3:73373387-73373406 | MS.gene011132:intron | 40.0% |
| !! | ACATTTTGATGTGGTACAGG+TGG | - | chr8.3:73373975-73373994 | MS.gene011132:CDS | 40.0% |
| !! | TAAAGATCAGTCGGTGTTGT+TGG | - | chr8.3:73373029-73373048 | MS.gene011132:CDS | 40.0% |
| ATCTTTACCAGCAGGCTGAA+TGG | + | chr8.3:73373016-73373035 | None:intergenic | 45.0% | |
| CTCTGCTGAATTGAACACTC+TGG | + | chr8.3:73372116-73372135 | None:intergenic | 45.0% | |
| TCTGTTCCTCTTCTTGACAC+CGG | + | chr8.3:73374085-73374104 | None:intergenic | 45.0% | |
| TTCACGATCTCCCATATGAG+TGG | + | chr8.3:73372051-73372070 | None:intergenic | 45.0% | |
| ! | TGTTGGCTACAACTAAGCCA+AGG | - | chr8.3:73373046-73373065 | MS.gene011132:CDS | 45.0% |
| !! | GCATGACAGACAAAGGCATT+AGG | + | chr8.3:73373818-73373837 | None:intergenic | 45.0% |
| ACCGACTGATCTTTACCAGC+AGG | + | chr8.3:73373024-73373043 | None:intergenic | 50.0% | |
| AGAGCTGCCTTCTTCAGATC+AGG | + | chr8.3:73374018-73374037 | None:intergenic | 50.0% | |
| AGCCTCAAAGTTGCCAAGTC+CGG | - | chr8.3:73374063-73374082 | MS.gene011132:CDS | 50.0% | |
| AGTACCAGGGCCACTCATAT+GGG | - | chr8.3:73372038-73372057 | MS.gene011132:CDS | 50.0% | |
| CTACAGGCCTGATCTGAAGA+AGG | - | chr8.3:73374008-73374027 | MS.gene011132:CDS | 50.0% | |
| GCCTGCTGGTAAAGATCAGT+CGG | - | chr8.3:73373020-73373039 | MS.gene011132:CDS | 50.0% | |
| GGCAAAGGCCGTTCAAAATC+AGG | - | chr8.3:73373131-73373150 | MS.gene011132:CDS | 50.0% | |
| GTGTTCCCTTGAAAAGGACC+TGG | - | chr8.3:73373353-73373372 | MS.gene011132:intron | 50.0% | |
| TCATGAAGAAGGAGTTCCGC+AGG | - | chr8.3:73373106-73373125 | MS.gene011132:CDS | 50.0% | |
| TGAAGAAGGCAGCTCTTGCA+AGG | - | chr8.3:73374022-73374041 | MS.gene011132:CDS | 50.0% | |
| ! | GAAGGCTTGTTCTGCTTCCT+TGG | + | chr8.3:73373066-73373085 | None:intergenic | 50.0% |
| ACTGTGACCATTCAGCCTGC+TGG | - | chr8.3:73373006-73373025 | MS.gene011132:CDS | 55.0% | |
| ATCTCCCATATGAGTGGCCC+TGG | + | chr8.3:73372045-73372064 | None:intergenic | 55.0% | |
| CACCGGACTTGGCAACTTTG+AGG | + | chr8.3:73374068-73374087 | None:intergenic | 55.0% | |
| CAGTACCAGGGCCACTCATA+TGG | - | chr8.3:73372037-73372056 | MS.gene011132:CDS | 55.0% | |
| CCTCTTCTTGACACCGGACT+TGG | + | chr8.3:73374079-73374098 | None:intergenic | 55.0% | |
| GAAGAAGGAGTTCCGCAGGA+TGG | - | chr8.3:73373110-73373129 | MS.gene011132:CDS | 55.0% | |
| ! | CCAAGTCCGGTGTCAAGAAG+AGG | - | chr8.3:73374076-73374095 | MS.gene011132:CDS | 55.0% |
| GAACGGCCTTTGCCATCCTG+CGG | + | chr8.3:73373125-73373144 | None:intergenic | 60.0% | |
| GGAGTTCCGCAGGATGGCAA+AGG | - | chr8.3:73373116-73373135 | MS.gene011132:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 73372030 | 73374113 | 73372030 | ID=MS.gene011132 |
| chr8.3 | mRNA | 73372030 | 73374113 | 73372030 | ID=MS.gene011132.t1;Parent=MS.gene011132 |
| chr8.3 | exon | 73373966 | 73374113 | 73373966 | ID=MS.gene011132.t1.exon1;Parent=MS.gene011132.t1 |
| chr8.3 | CDS | 73373966 | 73374113 | 73373966 | ID=cds.MS.gene011132.t1;Parent=MS.gene011132.t1 |
| chr8.3 | exon | 73372991 | 73373154 | 73372991 | ID=MS.gene011132.t1.exon2;Parent=MS.gene011132.t1 |
| chr8.3 | CDS | 73372991 | 73373154 | 73372991 | ID=cds.MS.gene011132.t1;Parent=MS.gene011132.t1 |
| chr8.3 | exon | 73372030 | 73372149 | 73372030 | ID=MS.gene011132.t1.exon3;Parent=MS.gene011132.t1 |
| chr8.3 | CDS | 73372030 | 73372149 | 73372030 | ID=cds.MS.gene011132.t1;Parent=MS.gene011132.t1 |
| Gene Sequence |
| Protein sequence |
