Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072152.t1 | XP_013444251.1 | 98.6 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 1.10E-68 | 269.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072152.t1 | Q9M0E2 | 72.7 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 1.5e-50 | 200.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072152.t1 | I3TAF1 | 98.6 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 7.7e-69 | 269.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050252 | MS.gene072152 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene059340 | MS.gene072152 | 0.808976 | 2.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072152 | MS.gene018749 | PPI |
| MS.gene072152 | MS.gene50464 | PPI |
| MS.gene072152 | MS.gene52753 | PPI |
| MS.gene072152 | MS.gene36675 | PPI |
| MS.gene069908 | MS.gene072152 | PPI |
| MS.gene072152 | MS.gene52750 | PPI |
| MS.gene072152 | MS.gene020330 | PPI |
| MS.gene072152 | MS.gene36392 | PPI |
| MS.gene018744 | MS.gene072152 | PPI |
| MS.gene072152 | MS.gene018074 | PPI |
| MS.gene23520 | MS.gene072152 | PPI |
| MS.gene072152 | MS.gene50465 | PPI |
| MS.gene072152 | MS.gene011132 | PPI |
| MS.gene072152 | MS.gene23528 | PPI |
| MS.gene76576 | MS.gene072152 | PPI |
| MS.gene072152 | MS.gene23525 | PPI |
| MS.gene072152 | MS.gene76576 | PPI |
| MS.gene072152 | MS.gene36570 | PPI |
| MS.gene072152 | MS.gene04837 | PPI |
| MS.gene072152 | MS.gene069908 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072152.t1 | MTR_8g015570 | 98.601 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 8.63e-102 | 288 |
| MS.gene072152.t1 | MTR_2g100410 | 91.608 | 143 | 12 | 0 | 1 | 143 | 1 | 143 | 1.39e-95 | 272 |
| MS.gene072152.t1 | MTR_8g015570 | 99.048 | 105 | 1 | 0 | 1 | 105 | 1 | 105 | 1.05e-73 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072152.t1 | AT4G29410 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 2.04e-72 | 213 |
| MS.gene072152.t1 | AT4G29410 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 2.04e-72 | 213 |
| MS.gene072152.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
| MS.gene072152.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
| MS.gene072152.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
Find 39 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGAACAACTCTTTCT+TGG | 0.235683 | 8.1:-82020374 | MS.gene072152:CDS |
| TCTTTCTTGGTGAAGGAGTT+TGG | 0.288497 | 8.1:-82020361 | MS.gene072152:CDS |
| CAGTACCAGGGCCACTCATA+TGG | 0.374084 | 8.1:-82020405 | MS.gene072152:CDS |
| AAGAAAATGGCGACAGTACC+AGG | 0.376148 | 8.1:-82020418 | None:intergenic |
| CCTCTTCTTGACACCGGACT+TGG | 0.386828 | 8.1:+82018379 | None:intergenic |
| GGCAAAGGCCGTTCAAAATC+AGG | 0.396746 | 8.1:-82019310 | MS.gene072152:intron |
| CACCGGACTTGGCAACTTTG+AGG | 0.398692 | 8.1:+82018390 | None:intergenic |
| CTTCTTCATGATAGATTTGT+GGG | 0.411613 | 8.1:+82019347 | None:intergenic |
| CCTTCTTCATGATAGATTTG+TGG | 0.414656 | 8.1:+82019346 | None:intergenic |
| CTCTGCTGAATTGAACACTC+TGG | 0.423197 | 8.1:+82020329 | None:intergenic |
| TAAAGATCAGTCGGTGTTGT+TGG | 0.464399 | 8.1:-82019412 | MS.gene072152:CDS |
| CTTAACTCCTACAAGTTCTC+TGG | 0.474879 | 8.1:-82020286 | MS.gene072152:intron |
| AGAGCTGCCTTCTTCAGATC+AGG | 0.476094 | 8.1:+82018440 | None:intergenic |
| AGCCTCAAAGTTGCCAAGTC+CGG | 0.480021 | 8.1:-82018392 | MS.gene072152:CDS |
| GAAGGCTTGTTCTGCTTCCT+CGG | 0.485520 | 8.1:+82019378 | None:intergenic |
| ATCTTTACCAGCAGGCTGAA+TGG | 0.487221 | 8.1:+82019428 | None:intergenic |
| GAACAACTCTTTCTTGGTGA+AGG | 0.490005 | 8.1:-82020368 | MS.gene072152:CDS |
| GAAGAGGAACAGACATGCTT+AGG | 0.493706 | 8.1:-82018363 | None:intergenic |
| ATCTCCCATATGAGTGGCCC+TGG | 0.496412 | 8.1:+82020400 | None:intergenic |
| CCACAAATCTATCATGAAGA+AGG | 0.502795 | 8.1:-82019346 | MS.gene072152:CDS |
| GATCATACCAGAGAACTTGT+AGG | 0.529045 | 8.1:+82020279 | None:intergenic |
| TCTGCTGAATTGAACACTCT+GGG | 0.534078 | 8.1:+82020330 | None:intergenic |
| ACTGTGACCATTCAGCCTGC+TGG | 0.535709 | 8.1:-82019435 | MS.gene072152:CDS |
| AGTACCAGGGCCACTCATAT+GGG | 0.555358 | 8.1:-82020404 | MS.gene072152:CDS |
| TGAAGAAGGCAGCTCTTGCA+AGG | 0.567533 | 8.1:-82018433 | MS.gene072152:CDS |
| CTACAGGCCTGATCTGAAGA+AGG | 0.570064 | 8.1:-82018447 | MS.gene072152:CDS |
| ACCGACTGATCTTTACCAGC+AGG | 0.573968 | 8.1:+82019420 | None:intergenic |
| GGAGTTCCGCAGGATGGCAA+AGG | 0.575137 | 8.1:-82019325 | MS.gene072152:CDS |
| TCATGAAGAAGGAGTTCCGC+AGG | 0.590257 | 8.1:-82019335 | MS.gene072152:CDS |
| CCAAGTCCGGTGTCAAGAAG+AGG | 0.591931 | 8.1:-82018379 | MS.gene072152:CDS |
| GCCTGCTGGTAAAGATCAGT+CGG | 0.593104 | 8.1:-82019421 | MS.gene072152:CDS |
| TCTGTTCCTCTTCTTGACAC+CGG | 0.602415 | 8.1:+82018373 | None:intergenic |
| AGGTGGCAGATAATTACTAC+AGG | 0.609077 | 8.1:-82018463 | MS.gene072152:CDS |
| GAACGGCCTTTGCCATCCTG+CGG | 0.614382 | 8.1:+82019319 | None:intergenic |
| GATTTGTGGGACAAAGCAGA+AGG | 0.621213 | 8.1:+82019360 | None:intergenic |
| TTCACGATCTCCCATATGAG+TGG | 0.628127 | 8.1:+82020394 | None:intergenic |
| GAAGAAGGAGTTCCGCAGGA+TGG | 0.644679 | 8.1:-82019331 | MS.gene072152:CDS |
| AGAAAATGGCGACAGTACCA+GGG | 0.649815 | 8.1:-82020417 | None:intergenic |
| TGTTGGCTACAACTAAGCCG+AGG | 0.730661 | 8.1:-82019395 | MS.gene072152:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTGTTTTTGAAAAT+TGG | - | chr8.1:82018620-82018639 | MS.gene072152:intron | 10.0% |
| !! | AAAGTCAAATCTAAATAATT+AGG | + | chr8.1:82019607-82019626 | None:intergenic | 15.0% |
| !! | AAAAATATGAACTTGATGAA+TGG | + | chr8.1:82019920-82019939 | None:intergenic | 20.0% |
| !! | AAAATATGAACTTGATGAAT+GGG | + | chr8.1:82019919-82019938 | None:intergenic | 20.0% |
| !! | AATGAATCTTTGTATTTCAA+TGG | - | chr8.1:82019264-82019283 | MS.gene072152:intron | 20.0% |
| !! | AATGTTATGTTAAAATACCA+AGG | + | chr8.1:82020281-82020300 | None:intergenic | 20.0% |
| !! | ACTAAAAAAACAACCAAAAT+TGG | + | chr8.1:82019033-82019052 | None:intergenic | 20.0% |
| !! | ATAACATTATCATCATAATG+AGG | + | chr8.1:82018663-82018682 | None:intergenic | 20.0% |
| !! | TCATATAAACAAAAAGCAAA+AGG | + | chr8.1:82019839-82019858 | None:intergenic | 20.0% |
| !!! | AAAAATTACCTGATTTTGAA+CGG | + | chr8.1:82019477-82019496 | None:intergenic | 20.0% |
| !!! | AAGATAAATGTACTTGTTAA+TGG | - | chr8.1:82018856-82018875 | MS.gene072152:intron | 20.0% |
| !!! | AGTTTTATAGAACATATGAA+TGG | - | chr8.1:82019515-82019534 | MS.gene072152:intron | 20.0% |
| !!! | GGTAAAATTTTAATTGATTC+TGG | - | chr8.1:82018877-82018896 | MS.gene072152:intron | 20.0% |
| !!! | TTGATTTTTTTTTTGACCAA+TGG | - | chr8.1:82018776-82018795 | MS.gene072152:intron | 20.0% |
| !!! | TTGTTTTTTTTTTTTTCCCT+AGG | + | chr8.1:82019767-82019786 | None:intergenic | 20.0% |
| !!! | TTTAACATAACATTTTGATG+TGG | - | chr8.1:82020287-82020306 | MS.gene072152:CDS | 20.0% |
| !!! | TTTTTTGTGATTCTGATAAT+GGG | - | chr8.1:82018529-82018548 | MS.gene072152:intron | 20.0% |
| !!! | TTTTTTGTGTTTCTGATAAT+GGG | - | chr8.1:82018975-82018994 | MS.gene072152:intron | 20.0% |
| ! | AACAAATTGAAAAATAGCCA+TGG | + | chr8.1:82019670-82019689 | None:intergenic | 25.0% |
| ! | AGAATCACAAAAAAGAGAAA+AGG | + | chr8.1:82018523-82018542 | None:intergenic | 25.0% |
| ! | ATATATATCACTCCTATCAT+AGG | + | chr8.1:82018703-82018722 | None:intergenic | 25.0% |
| ! | GAATCACAAAAAAGAGAAAA+GGG | + | chr8.1:82018522-82018541 | None:intergenic | 25.0% |
| ! | TATATATCACTCCTATCATA+GGG | + | chr8.1:82018702-82018721 | None:intergenic | 25.0% |
| ! | TCAATGCATTGTCTTTATAA+AGG | - | chr8.1:82019863-82019882 | MS.gene072152:intron | 25.0% |
| !! | CATGCACAATTTTTATATCA+TGG | - | chr8.1:82020151-82020170 | MS.gene072152:intron | 25.0% |
| !! | TTAACATAAACTGTGTTGAT+TGG | - | chr8.1:82019054-82019073 | MS.gene072152:intron | 25.0% |
| !!! | AATTTTTTCAAACTCTGGTT+TGG | - | chr8.1:82019490-82019509 | MS.gene072152:intron | 25.0% |
| !!! | CTTTTTTGTGATTCTGATAA+TGG | - | chr8.1:82018528-82018547 | MS.gene072152:intron | 25.0% |
| !!! | GTATTTGAATTGTTTTGTCT+TGG | - | chr8.1:82018923-82018942 | MS.gene072152:intron | 25.0% |
| !!! | GTTTTTTGTGTTTCTGATAA+TGG | - | chr8.1:82018974-82018993 | MS.gene072152:intron | 25.0% |
| !!! | TCATGTTTTTCAATTGTTAG+TGG | - | chr8.1:82019209-82019228 | MS.gene072152:intron | 25.0% |
| !!! | TCTTATTTTGTTGCCAATTT+TGG | - | chr8.1:82019017-82019036 | MS.gene072152:intron | 25.0% |
| ACCTATCATACATCAATGTA+AGG | + | chr8.1:82019306-82019325 | None:intergenic | 30.0% | |
| ATATATCACTCCTATCATAG+GGG | + | chr8.1:82018701-82018720 | None:intergenic | 30.0% | |
| ATGTTAAAATACCAAGGAAC+TGG | + | chr8.1:82020275-82020294 | None:intergenic | 30.0% | |
| ATTTAAACTTCCCCTATGAT+AGG | - | chr8.1:82018688-82018707 | MS.gene072152:intron | 30.0% | |
| CTTACAATGTACATGTTCTA+GGG | - | chr8.1:82018952-82018971 | MS.gene072152:intron | 30.0% | |
| CTTCTTCATGATAGATTTGT+GGG | + | chr8.1:82019432-82019451 | None:intergenic | 30.0% | |
| TCATTTAATTCCTTCAACAC+CGG | + | chr8.1:82019154-82019173 | None:intergenic | 30.0% | |
| TCCTTACATTGATGTATGAT+AGG | - | chr8.1:82019302-82019321 | MS.gene072152:intron | 30.0% | |
| TGAAATATTCATGTTACGCT+TGG | - | chr8.1:82020013-82020032 | MS.gene072152:intron | 30.0% | |
| ! | GCACAATTTTTATATCATGG+TGG | - | chr8.1:82020154-82020173 | MS.gene072152:intron | 30.0% |
| !! | AAGTAGAAGTTTTGCTGATT+TGG | - | chr8.1:82018738-82018757 | MS.gene072152:intron | 30.0% |
| !! | ATAACATTTTGATGTGGTAC+AGG | - | chr8.1:82020293-82020312 | MS.gene072152:CDS | 30.0% |
| !! | TGATTCTGATAATGGGTATT+TGG | - | chr8.1:82018536-82018555 | MS.gene072152:intron | 30.0% |
| !!! | AGTAGAAGTTTTGCTGATTT+GGG | - | chr8.1:82018739-82018758 | MS.gene072152:intron | 30.0% |
| !!! | CAGGTAATTTTTTCAAACTC+TGG | - | chr8.1:82019485-82019504 | MS.gene072152:intron | 30.0% |
| !!! | TGATTTTGGTGTTATGTTTC+TGG | - | chr8.1:82019718-82019737 | MS.gene072152:intron | 30.0% |
| !!! | TTTTTTTTGACCAATGGTAG+TGG | - | chr8.1:82018782-82018801 | MS.gene072152:intron | 30.0% |
| AAATTGTGCATGACAGACAA+AGG | + | chr8.1:82020143-82020162 | None:intergenic | 35.0% | |
| ACATAAGTAGGATCACTATG+TGG | - | chr8.1:82019980-82019999 | MS.gene072152:intron | 35.0% | |
| ACATTGATGTATGATAGGTC+TGG | - | chr8.1:82019307-82019326 | MS.gene072152:intron | 35.0% | |
| ATTGTCTGATTAACCTAGTC+CGG | - | chr8.1:82019132-82019151 | MS.gene072152:intron | 35.0% | |
| CATAAGTAGGATCACTATGT+GGG | - | chr8.1:82019981-82020000 | MS.gene072152:intron | 35.0% | |
| CCACAAATCTATCATGAAGA+AGG | - | chr8.1:82019430-82019449 | MS.gene072152:CDS | 35.0% | |
| CCTAGAACATGTACATTGTA+AGG | + | chr8.1:82018954-82018973 | None:intergenic | 35.0% | |
| CCTTACAATGTACATGTTCT+AGG | - | chr8.1:82018951-82018970 | MS.gene072152:intron | 35.0% | |
| CCTTCTTCATGATAGATTTG+TGG | + | chr8.1:82019433-82019452 | None:intergenic | 35.0% | |
| GAAGAAGAACAACTCTTTCT+TGG | - | chr8.1:82018402-82018421 | MS.gene072152:CDS | 35.0% | |
| GGAAACAAGTGAAATACTTG+TGG | + | chr8.1:82020115-82020134 | None:intergenic | 35.0% | |
| TTAGTTGCATTGTTGTCCTA+GGG | - | chr8.1:82019748-82019767 | MS.gene072152:intron | 35.0% | |
| TTTAGTTGCATTGTTGTCCT+AGG | - | chr8.1:82019747-82019766 | MS.gene072152:intron | 35.0% | |
| ! | CATTCAAGTTTCACAAGCAA+GGG | + | chr8.1:82019801-82019820 | None:intergenic | 35.0% |
| ! | GTCTTTATAAAGGCGTAAGA+TGG | - | chr8.1:82019873-82019892 | MS.gene072152:intron | 35.0% |
| ! | TCATTCAAGTTTCACAAGCA+AGG | + | chr8.1:82019802-82019821 | None:intergenic | 35.0% |
| ! | TGCAGCATCATTTTGTAGAA+CGG | + | chr8.1:82019946-82019965 | None:intergenic | 35.0% |
| ! | TTAATTGATTCTGGTGTGCT+AGG | - | chr8.1:82018886-82018905 | MS.gene072152:intron | 35.0% |
| ! | TTTTCCATAACCACTACCAT+TGG | + | chr8.1:82018795-82018814 | None:intergenic | 35.0% |
| AAAATGATGCTGCAGTGATG+AGG | - | chr8.1:82019952-82019971 | MS.gene072152:intron | 40.0% | |
| AACACCAAAATCACTCATCC+AGG | + | chr8.1:82019711-82019730 | None:intergenic | 40.0% | |
| AGGTGGCAGATAATTACTAC+AGG | - | chr8.1:82020313-82020332 | MS.gene072152:CDS | 40.0% | |
| CTTAACTCCTACAAGTTCTC+TGG | - | chr8.1:82018490-82018509 | MS.gene072152:intron | 40.0% | |
| GAACAACTCTTTCTTGGTGA+AGG | - | chr8.1:82018408-82018427 | MS.gene072152:CDS | 40.0% | |
| GATCATACCAGAGAACTTGT+AGG | + | chr8.1:82018500-82018519 | None:intergenic | 40.0% | |
| TCTGCTGAATTGAACACTCT+GGG | + | chr8.1:82018449-82018468 | None:intergenic | 40.0% | |
| TCTTTCTTGGTGAAGGAGTT+TGG | - | chr8.1:82018415-82018434 | MS.gene072152:CDS | 40.0% | |
| ! | CGCTTTTAGCACAAATCAGA+GGG | + | chr8.1:82020244-82020263 | None:intergenic | 40.0% |
| ! | GATGAGGCTCTAACATAAGT+AGG | - | chr8.1:82019968-82019987 | MS.gene072152:intron | 40.0% |
| !! | ACATTTTGATGTGGTACAGG+TGG | - | chr8.1:82020296-82020315 | MS.gene072152:CDS | 40.0% |
| !! | TAAAGATCAGTCGGTGTTGT+TGG | - | chr8.1:82019364-82019383 | MS.gene072152:CDS | 40.0% |
| !! | TCGCTTTTAGCACAAATCAG+AGG | + | chr8.1:82020245-82020264 | None:intergenic | 40.0% |
| !! | TTGACCAATGGTAGTGGTTA+TGG | - | chr8.1:82018788-82018807 | MS.gene072152:intron | 40.0% |
| AATTCCTTCAACACCGGACT+AGG | + | chr8.1:82019148-82019167 | None:intergenic | 45.0% | |
| AGCACAAATCAGAGGGACAT+AGG | + | chr8.1:82020237-82020256 | None:intergenic | 45.0% | |
| ATCTTTACCAGCAGGCTGAA+TGG | + | chr8.1:82019351-82019370 | None:intergenic | 45.0% | |
| CTCTGCTGAATTGAACACTC+TGG | + | chr8.1:82018450-82018469 | None:intergenic | 45.0% | |
| GATTTGTGGGACAAAGCAGA+AGG | + | chr8.1:82019419-82019438 | None:intergenic | 45.0% | |
| GCGAAATATAGCCAGTTCCT+TGG | - | chr8.1:82020261-82020280 | MS.gene072152:intron | 45.0% | |
| TCTGTTCCTCTTCTTGACAC+CGG | + | chr8.1:82020406-82020425 | None:intergenic | 45.0% | |
| TTCACGATCTCCCATATGAG+TGG | + | chr8.1:82018385-82018404 | None:intergenic | 45.0% | |
| ! | ACTCATCCAGGTGCTTTTCA+AGG | + | chr8.1:82019699-82019718 | None:intergenic | 45.0% |
| ! | AGCACCTGGATGAGTGATTT+TGG | - | chr8.1:82019704-82019723 | MS.gene072152:intron | 45.0% |
| ! | CTCATCCAGGTGCTTTTCAA+GGG | + | chr8.1:82019698-82019717 | None:intergenic | 45.0% |
| ! | TTAACCTAGTCCGGTGTTGA+AGG | - | chr8.1:82019141-82019160 | MS.gene072152:intron | 45.0% |
| !! | CTGTTTGCTGTCAATTGCCA+TGG | - | chr8.1:82019650-82019669 | MS.gene072152:intron | 45.0% |
| !! | GCATGACAGACAAAGGCATT+AGG | + | chr8.1:82020136-82020155 | None:intergenic | 45.0% |
| ACCGACTGATCTTTACCAGC+AGG | + | chr8.1:82019359-82019378 | None:intergenic | 50.0% | |
| AGAGCTGCCTTCTTCAGATC+AGG | + | chr8.1:82020339-82020358 | None:intergenic | 50.0% | |
| AGCCTCAAAGTTGCCAAGTC+CGG | - | chr8.1:82020384-82020403 | MS.gene072152:CDS | 50.0% | |
| AGTACCAGGGCCACTCATAT+GGG | - | chr8.1:82018372-82018391 | MS.gene072152:CDS | 50.0% | |
| CTACAGGCCTGATCTGAAGA+AGG | - | chr8.1:82020329-82020348 | MS.gene072152:CDS | 50.0% | |
| GCCTGCTGGTAAAGATCAGT+CGG | - | chr8.1:82019355-82019374 | MS.gene072152:CDS | 50.0% | |
| GGCAAAGGCCGTTCAAAATC+AGG | - | chr8.1:82019466-82019485 | MS.gene072152:intron | 50.0% | |
| TCATGAAGAAGGAGTTCCGC+AGG | - | chr8.1:82019441-82019460 | MS.gene072152:CDS | 50.0% | |
| TGAAGAAGGCAGCTCTTGCA+AGG | - | chr8.1:82020343-82020362 | MS.gene072152:CDS | 50.0% | |
| ! | GAAGGCTTGTTCTGCTTCCT+CGG | + | chr8.1:82019401-82019420 | None:intergenic | 50.0% |
| ! | TGTTGGCTACAACTAAGCCG+AGG | - | chr8.1:82019381-82019400 | MS.gene072152:CDS | 50.0% |
| !! | GTGTTCCCTTGAAAAGCACC+TGG | - | chr8.1:82019690-82019709 | MS.gene072152:intron | 50.0% |
| ACTGTGACCATTCAGCCTGC+TGG | - | chr8.1:82019341-82019360 | MS.gene072152:CDS | 55.0% | |
| ATCTCCCATATGAGTGGCCC+TGG | + | chr8.1:82018379-82018398 | None:intergenic | 55.0% | |
| CACCGGACTTGGCAACTTTG+AGG | + | chr8.1:82020389-82020408 | None:intergenic | 55.0% | |
| CAGTACCAGGGCCACTCATA+TGG | - | chr8.1:82018371-82018390 | MS.gene072152:CDS | 55.0% | |
| CCTCTTCTTGACACCGGACT+TGG | + | chr8.1:82020400-82020419 | None:intergenic | 55.0% | |
| GAAGAAGGAGTTCCGCAGGA+TGG | - | chr8.1:82019445-82019464 | MS.gene072152:CDS | 55.0% | |
| ! | CCAAGTCCGGTGTCAAGAAG+AGG | - | chr8.1:82020397-82020416 | MS.gene072152:CDS | 55.0% |
| GAACGGCCTTTGCCATCCTG+CGG | + | chr8.1:82019460-82019479 | None:intergenic | 60.0% | |
| GGAGTTCCGCAGGATGGCAA+AGG | - | chr8.1:82019451-82019470 | MS.gene072152:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 82018364 | 82020434 | 82018364 | ID=MS.gene072152 |
| chr8.1 | mRNA | 82018364 | 82020434 | 82018364 | ID=MS.gene072152.t1;Parent=MS.gene072152 |
| chr8.1 | exon | 82020287 | 82020434 | 82020287 | ID=MS.gene072152.t1.exon1;Parent=MS.gene072152.t1 |
| chr8.1 | CDS | 82020287 | 82020434 | 82020287 | ID=cds.MS.gene072152.t1;Parent=MS.gene072152.t1 |
| chr8.1 | exon | 82019311 | 82019474 | 82019311 | ID=MS.gene072152.t1.exon2;Parent=MS.gene072152.t1 |
| chr8.1 | CDS | 82019311 | 82019474 | 82019311 | ID=cds.MS.gene072152.t1;Parent=MS.gene072152.t1 |
| chr8.1 | exon | 82018364 | 82018483 | 82018364 | ID=MS.gene072152.t1.exon3;Parent=MS.gene072152.t1 |
| chr8.1 | CDS | 82018364 | 82018483 | 82018364 | ID=cds.MS.gene072152.t1;Parent=MS.gene072152.t1 |
| Gene Sequence |
| Protein sequence |
