Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36570.t1 | XP_013444251.1 | 98.6 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 1.10E-68 | 269.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36570.t1 | Q9M0E2 | 72.7 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 1.5e-50 | 200.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36570.t1 | I3TAF1 | 98.6 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 7.7e-69 | 269.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76576 | MS.gene36570 | PPI |
| MS.gene36570 | MS.gene018749 | PPI |
| MS.gene018074 | MS.gene36570 | PPI |
| MS.gene069908 | MS.gene36570 | PPI |
| MS.gene36570 | MS.gene52750 | PPI |
| MS.gene36570 | MS.gene020330 | PPI |
| MS.gene072152 | MS.gene36570 | PPI |
| MS.gene018744 | MS.gene36570 | PPI |
| MS.gene36675 | MS.gene36570 | PPI |
| MS.gene23528 | MS.gene36570 | PPI |
| MS.gene23520 | MS.gene36570 | PPI |
| MS.gene36570 | MS.gene011132 | PPI |
| MS.gene36392 | MS.gene36570 | PPI |
| MS.gene50464 | MS.gene36570 | PPI |
| MS.gene50465 | MS.gene36570 | PPI |
| MS.gene23525 | MS.gene36570 | PPI |
| MS.gene52753 | MS.gene36570 | PPI |
| MS.gene04837 | MS.gene36570 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36570.t1 | MTR_8g015570 | 98.601 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 8.63e-102 | 288 |
| MS.gene36570.t1 | MTR_2g100410 | 91.608 | 143 | 12 | 0 | 1 | 143 | 1 | 143 | 1.39e-95 | 272 |
| MS.gene36570.t1 | MTR_8g015570 | 99.048 | 105 | 1 | 0 | 1 | 105 | 1 | 105 | 1.05e-73 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36570.t1 | AT4G29410 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 2.04e-72 | 213 |
| MS.gene36570.t1 | AT4G29410 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 2.04e-72 | 213 |
| MS.gene36570.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
| MS.gene36570.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
| MS.gene36570.t1 | AT2G19730 | 72.727 | 143 | 39 | 0 | 1 | 143 | 1 | 143 | 3.12e-71 | 210 |
Find 38 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGAACAACTCTTTCT+TGG | 0.235683 | 8.4:-75877408 | MS.gene36570:CDS |
| TCTTTCTTGGTGAAGGAGTT+TGG | 0.288497 | 8.4:-75877395 | MS.gene36570:CDS |
| GAAGGCTTGTTCTGCTTCCT+TGG | 0.330285 | 8.4:+75876409 | None:intergenic |
| CAGTACCAGGGCCACTCATA+TGG | 0.374084 | 8.4:-75877439 | MS.gene36570:CDS |
| AAGAAAATGGCGACAGTACC+AGG | 0.376148 | 8.4:-75877452 | None:intergenic |
| CCTCTTCTTGACACCGGACT+TGG | 0.386828 | 8.4:+75875394 | None:intergenic |
| GGCAAAGGCCGTTCAAAATC+AGG | 0.396746 | 8.4:-75876341 | MS.gene36570:intron |
| CACCGGACTTGGCAACTTTG+AGG | 0.398692 | 8.4:+75875405 | None:intergenic |
| CAGAGAACTTGTAGGAGTTA+AGG | 0.403576 | 8.4:+75877321 | None:intergenic |
| CTCTGCTGAATTGAACACTC+TGG | 0.423197 | 8.4:+75877363 | None:intergenic |
| TAAAGATCAGTCGGTGTTGT+TGG | 0.464399 | 8.4:-75876443 | MS.gene36570:CDS |
| CTTAACTCCTACAAGTTCTC+TGG | 0.465620 | 8.4:-75877320 | MS.gene36570:intron |
| AGAGCTGCCTTCTTCAGATC+AGG | 0.476094 | 8.4:+75875455 | None:intergenic |
| AGCCTCAAAGTTGCCAAGTC+CGG | 0.480021 | 8.4:-75875407 | MS.gene36570:CDS |
| ATCTTTACCAGCAGGCTGAA+TGG | 0.487221 | 8.4:+75876459 | None:intergenic |
| GAACAACTCTTTCTTGGTGA+AGG | 0.490005 | 8.4:-75877402 | MS.gene36570:CDS |
| ATCTCCCATATGAGTGGCCC+TGG | 0.496412 | 8.4:+75877434 | None:intergenic |
| TCACAAATCTATCATGAAGA+AGG | 0.505696 | 8.4:-75876377 | MS.gene36570:CDS |
| GATCATACCAGAGAACTTGT+AGG | 0.529045 | 8.4:+75877313 | None:intergenic |
| TCTGCTGAATTGAACACTCT+GGG | 0.534078 | 8.4:+75877364 | None:intergenic |
| ACTGTGACCATTCAGCCTGC+TGG | 0.535709 | 8.4:-75876466 | MS.gene36570:CDS |
| AGTACCAGGGCCACTCATAT+GGG | 0.555358 | 8.4:-75877438 | MS.gene36570:CDS |
| GAAGAGGAACAGACATGCCT+AGG | 0.557247 | 8.4:-75875378 | None:intergenic |
| TGAAGAAGGCAGCTCTTGCA+AGG | 0.567533 | 8.4:-75875448 | MS.gene36570:CDS |
| CTACAGGCCTGATCTGAAGA+AGG | 0.570064 | 8.4:-75875462 | MS.gene36570:CDS |
| ACCGACTGATCTTTACCAGC+AGG | 0.573968 | 8.4:+75876451 | None:intergenic |
| GGAGTTCCGCAGGATGGCAA+AGG | 0.575137 | 8.4:-75876356 | MS.gene36570:CDS |
| TCATGAAGAAGGAGTTCCGC+AGG | 0.590257 | 8.4:-75876366 | MS.gene36570:CDS |
| CCAAGTCCGGTGTCAAGAAG+AGG | 0.591931 | 8.4:-75875394 | MS.gene36570:CDS |
| GCCTGCTGGTAAAGATCAGT+CGG | 0.593104 | 8.4:-75876452 | MS.gene36570:CDS |
| TCTGTTCCTCTTCTTGACAC+CGG | 0.602415 | 8.4:+75875388 | None:intergenic |
| GATTTGTGAGACAAAGCAGA+AGG | 0.606292 | 8.4:+75876391 | None:intergenic |
| AGGTGGCAGATAATTACTAC+AGG | 0.609077 | 8.4:-75875478 | MS.gene36570:CDS |
| GAACGGCCTTTGCCATCCTG+CGG | 0.614382 | 8.4:+75876350 | None:intergenic |
| TTCACGATCTCCCATATGAG+TGG | 0.628127 | 8.4:+75877428 | None:intergenic |
| GAAGAAGGAGTTCCGCAGGA+TGG | 0.644679 | 8.4:-75876362 | MS.gene36570:CDS |
| AGAAAATGGCGACAGTACCA+GGG | 0.649815 | 8.4:-75877451 | None:intergenic |
| TGTTGGCTACAACTAAGCCA+AGG | 0.697641 | 8.4:-75876426 | MS.gene36570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAGTCTATAC+TGG | - | chr8.4:75876808-75876827 | MS.gene36570:intron | 15.0% |
| !! | AAAGTCAAATCTAAATAATT+AGG | + | chr8.4:75876625-75876644 | None:intergenic | 15.0% |
| !! | AATGTTATGTTAAAATACTA+AGG | + | chr8.4:75877315-75877334 | None:intergenic | 15.0% |
| !!! | GGTAAAATTTTAATTGATTT+TGG | - | chr8.4:75875896-75875915 | MS.gene36570:intron | 15.0% |
| !!! | TAGACTTTTTTTTTTTTTCT+AGG | + | chr8.4:75876805-75876824 | None:intergenic | 15.0% |
| !! | AAAAATATGAACTTGATGAA+TGG | + | chr8.4:75876953-75876972 | None:intergenic | 20.0% |
| !! | AAAATATGAACTTGATGAAT+GGG | + | chr8.4:75876952-75876971 | None:intergenic | 20.0% |
| !! | AACTAAAAATCAACCAAAAT+TGG | + | chr8.4:75876052-75876071 | None:intergenic | 20.0% |
| !! | AATGAATCTTTGTATTTCAA+TGG | - | chr8.4:75876282-75876301 | MS.gene36570:intron | 20.0% |
| !! | TCATATAAAGAAAAAGCAAA+AGG | + | chr8.4:75876872-75876891 | None:intergenic | 20.0% |
| !! | TTAACATAAACTATGTTGAT+TGG | - | chr8.4:75876072-75876091 | MS.gene36570:intron | 20.0% |
| !!! | AAAAATTACCTGATTTTGAA+CGG | + | chr8.4:75876495-75876514 | None:intergenic | 20.0% |
| !!! | AGTTTTATAGAACATATGAA+TGG | - | chr8.4:75876533-75876552 | MS.gene36570:intron | 20.0% |
| !!! | GGTAAAATTTTAATTGATTC+TGG | - | chr8.4:75876248-75876267 | MS.gene36570:intron | 20.0% |
| !!! | GTATATTAATTGTTTTGTCT+TGG | - | chr8.4:75875942-75875961 | MS.gene36570:intron | 20.0% |
| !!! | TTTAACATAACATTTTGATG+TGG | - | chr8.4:75877321-75877340 | MS.gene36570:CDS | 20.0% |
| !!! | TTTTTTGTGATTCTGATAAT+GGG | - | chr8.4:75875544-75875563 | MS.gene36570:intron | 20.0% |
| !!! | TTTTTTGTGTTTCTGATAAT+GGG | - | chr8.4:75875994-75876013 | MS.gene36570:intron | 20.0% |
| !!! | TTTTTTTTGAACAATGATTG+TGG | - | chr8.4:75875796-75875815 | MS.gene36570:intron | 20.0% |
| ! | AAATGTACTTCAATTGTTAG+TGG | - | chr8.4:75875875-75875894 | MS.gene36570:intron | 25.0% |
| ! | AACAAATTGAAGAATAGCTA+TGG | + | chr8.4:75876688-75876707 | None:intergenic | 25.0% |
| ! | AGAATCACAAAAAAGAGAAA+AGG | + | chr8.4:75875538-75875557 | None:intergenic | 25.0% |
| ! | ATCATCAATTCATCATAATG+AGG | + | chr8.4:75875670-75875689 | None:intergenic | 25.0% |
| ! | GAATCACAAAAAAGAGAAAA+GGG | + | chr8.4:75875537-75875556 | None:intergenic | 25.0% |
| ! | TCAATGCATTGTCTTTATAA+AGG | - | chr8.4:75876896-75876915 | MS.gene36570:intron | 25.0% |
| !! | ATGATTTTATGCATTTGTGT+GGG | - | chr8.4:75876731-75876750 | MS.gene36570:intron | 25.0% |
| !!! | AATTTTTTCAAACTCTGGTT+TGG | - | chr8.4:75876508-75876527 | MS.gene36570:intron | 25.0% |
| !!! | CTTTTTTGTGATTCTGATAA+TGG | - | chr8.4:75875543-75875562 | MS.gene36570:intron | 25.0% |
| !!! | GTTTTTTGTGTTTCTGATAA+TGG | - | chr8.4:75875993-75876012 | MS.gene36570:intron | 25.0% |
| !!! | TCATGTTTTTCAATTGTTAG+TGG | - | chr8.4:75876227-75876246 | MS.gene36570:intron | 25.0% |
| !!! | TCTTATTTTGTTGCCAATTT+TGG | - | chr8.4:75876036-75876055 | MS.gene36570:intron | 25.0% |
| ACAAATGCATAAAATCATCC+AGG | + | chr8.4:75876729-75876748 | None:intergenic | 30.0% | |
| ACCTATCATACATCAATGTA+AGG | + | chr8.4:75876324-75876343 | None:intergenic | 30.0% | |
| ATATTTCACTCCTATCATAG+AGG | + | chr8.4:75875716-75875735 | None:intergenic | 30.0% | |
| ATTGTCTGATTAACCTAGTA+CGG | - | chr8.4:75876150-75876169 | MS.gene36570:intron | 30.0% | |
| ATTTAAGCTTCCTCTATGAT+AGG | - | chr8.4:75875703-75875722 | MS.gene36570:intron | 30.0% | |
| CATTCAAATTTCACTAGCAA+GGG | + | chr8.4:75876834-75876853 | None:intergenic | 30.0% | |
| CTTACAATGTACATGTTCTA+GGG | - | chr8.4:75875971-75875990 | MS.gene36570:intron | 30.0% | |
| TCACAAATCTATCATGAAGA+AGG | - | chr8.4:75876448-75876467 | MS.gene36570:CDS | 30.0% | |
| TCATTCAAATTTCACTAGCA+AGG | + | chr8.4:75876835-75876854 | None:intergenic | 30.0% | |
| TCCTTACATTGATGTATGAT+AGG | - | chr8.4:75876320-75876339 | MS.gene36570:intron | 30.0% | |
| TGAAATATTCATGTTACGCT+TGG | - | chr8.4:75877048-75877067 | MS.gene36570:intron | 30.0% | |
| TTGAACAATGATTGTGGTTA+TGG | - | chr8.4:75875802-75875821 | MS.gene36570:intron | 30.0% | |
| TTGTGCTAATAGCGAAATAT+AGG | - | chr8.4:75877284-75877303 | MS.gene36570:intron | 30.0% | |
| ! | GATGATTTTATGCATTTGTG+TGG | - | chr8.4:75876730-75876749 | MS.gene36570:intron | 30.0% |
| !! | AAGTAGAAGTTTTGCTGATT+TGG | - | chr8.4:75875751-75875770 | MS.gene36570:intron | 30.0% |
| !! | ATAACATTTTGATGTGGTAC+AGG | - | chr8.4:75877327-75877346 | MS.gene36570:CDS | 30.0% |
| !! | CATGCAGAGTTTTAATATCA+TGG | - | chr8.4:75877186-75877205 | MS.gene36570:intron | 30.0% |
| !! | TGATTCTGATAATGGGTATT+TGG | - | chr8.4:75875551-75875570 | MS.gene36570:intron | 30.0% |
| !! | TTAATTGATTTTGGTGTGCT+AGG | - | chr8.4:75875905-75875924 | MS.gene36570:intron | 30.0% |
| !!! | AGTAGAAGTTTTGCTGATTT+GGG | - | chr8.4:75875752-75875771 | MS.gene36570:intron | 30.0% |
| !!! | CAGGTAATTTTTTCAAACTC+TGG | - | chr8.4:75876503-75876522 | MS.gene36570:intron | 30.0% |
| !!! | TGATTTTGGTGTTATGTTTC+TGG | - | chr8.4:75876756-75876775 | MS.gene36570:intron | 30.0% |
| ACATTGATGTATGATAGGTC+TGG | - | chr8.4:75876325-75876344 | MS.gene36570:intron | 35.0% | |
| ATATAAGTAGGATCCCTATG+TGG | - | chr8.4:75877015-75877034 | MS.gene36570:intron | 35.0% | |
| CCTAGAACATGTACATTGTA+AGG | + | chr8.4:75875973-75875992 | None:intergenic | 35.0% | |
| CCTTACAATGTACATGTTCT+AGG | - | chr8.4:75875970-75875989 | MS.gene36570:intron | 35.0% | |
| GAAGAAGAACAACTCTTTCT+TGG | - | chr8.4:75875417-75875436 | MS.gene36570:CDS | 35.0% | |
| GGAAACAAGTGAAATACTTG+TGG | + | chr8.4:75877150-75877169 | None:intergenic | 35.0% | |
| TATAAGTAGGATCCCTATGT+GGG | - | chr8.4:75877016-75877035 | MS.gene36570:intron | 35.0% | |
| TCATTGAAGAAACCCACATA+GGG | + | chr8.4:75877031-75877050 | None:intergenic | 35.0% | |
| TTCATTGAAGAAACCCACAT+AGG | + | chr8.4:75877032-75877051 | None:intergenic | 35.0% | |
| ! | GTCTTTATAAAGGCGTAAGA+TGG | - | chr8.4:75876906-75876925 | MS.gene36570:intron | 35.0% |
| ! | TGAGGCTCTAACATATAAGT+AGG | - | chr8.4:75877003-75877022 | MS.gene36570:intron | 35.0% |
| ! | TGCAGCATCATTTTGTAGAA+CGG | + | chr8.4:75876979-75876998 | None:intergenic | 35.0% |
| ! | TTTGTTGTGTTCCCTTGAAA+AGG | - | chr8.4:75876702-75876721 | MS.gene36570:intron | 35.0% |
| !! | GCAGAGTTTTAATATCATGG+CGG | - | chr8.4:75877189-75877208 | MS.gene36570:intron | 35.0% |
| AAAATGATGCTGCAGTGATG+AGG | - | chr8.4:75876985-75877004 | MS.gene36570:intron | 40.0% | |
| AAACTCTGCATGACAGACAA+AGG | + | chr8.4:75877178-75877197 | None:intergenic | 40.0% | |
| AATTCCTTCAACACCGTACT+AGG | + | chr8.4:75876166-75876185 | None:intergenic | 40.0% | |
| AGCACAAATCAGAGGAACAT+AGG | + | chr8.4:75877271-75877290 | None:intergenic | 40.0% | |
| AGGTGGCAGATAATTACTAC+AGG | - | chr8.4:75877347-75877366 | MS.gene36570:CDS | 40.0% | |
| CAGAGAACTTGTAGGAGTTA+AGG | + | chr8.4:75875507-75875526 | None:intergenic | 40.0% | |
| CTTAACTCCTACAAGTTCTC+TGG | - | chr8.4:75875505-75875524 | MS.gene36570:intron | 40.0% | |
| GAACAACTCTTTCTTGGTGA+AGG | - | chr8.4:75875423-75875442 | MS.gene36570:CDS | 40.0% | |
| GATCATACCAGAGAACTTGT+AGG | + | chr8.4:75875515-75875534 | None:intergenic | 40.0% | |
| GATTTGTGAGACAAAGCAGA+AGG | + | chr8.4:75876437-75876456 | None:intergenic | 40.0% | |
| TCGCTATTAGCACAAATCAG+AGG | + | chr8.4:75877279-75877298 | None:intergenic | 40.0% | |
| TCTGCTGAATTGAACACTCT+GGG | + | chr8.4:75875464-75875483 | None:intergenic | 40.0% | |
| TCTTTCTTGGTGAAGGAGTT+TGG | - | chr8.4:75875430-75875449 | MS.gene36570:CDS | 40.0% | |
| ! | AATCATCCAGGTCCTTTTCA+AGG | + | chr8.4:75876717-75876736 | None:intergenic | 40.0% |
| ! | ATCATCCAGGTCCTTTTCAA+GGG | + | chr8.4:75876716-75876735 | None:intergenic | 40.0% |
| ! | CATTTGTGTGGGTGTGATTT+TGG | - | chr8.4:75876742-75876761 | MS.gene36570:intron | 40.0% |
| ! | TTAACCTAGTACGGTGTTGA+AGG | - | chr8.4:75876159-75876178 | MS.gene36570:intron | 40.0% |
| !! | ACATTTTGATGTGGTACAGG+TGG | - | chr8.4:75877330-75877349 | MS.gene36570:CDS | 40.0% |
| !! | TAAAGATCAGTCGGTGTTGT+TGG | - | chr8.4:75876382-75876401 | MS.gene36570:CDS | 40.0% |
| ATCTTTACCAGCAGGCTGAA+TGG | + | chr8.4:75876369-75876388 | None:intergenic | 45.0% | |
| CTCTGCTGAATTGAACACTC+TGG | + | chr8.4:75875465-75875484 | None:intergenic | 45.0% | |
| TCTGTTCCTCTTCTTGACAC+CGG | + | chr8.4:75877440-75877459 | None:intergenic | 45.0% | |
| TTCACGATCTCCCATATGAG+TGG | + | chr8.4:75875400-75875419 | None:intergenic | 45.0% | |
| ! | TGTTGGCTACAACTAAGCCA+AGG | - | chr8.4:75876399-75876418 | MS.gene36570:CDS | 45.0% |
| !! | GCATGACAGACAAAGGCATT+AGG | + | chr8.4:75877171-75877190 | None:intergenic | 45.0% |
| ACCGACTGATCTTTACCAGC+AGG | + | chr8.4:75876377-75876396 | None:intergenic | 50.0% | |
| AGAGCTGCCTTCTTCAGATC+AGG | + | chr8.4:75877373-75877392 | None:intergenic | 50.0% | |
| AGCCTCAAAGTTGCCAAGTC+CGG | - | chr8.4:75877418-75877437 | MS.gene36570:CDS | 50.0% | |
| AGTACCAGGGCCACTCATAT+GGG | - | chr8.4:75875387-75875406 | MS.gene36570:CDS | 50.0% | |
| CTACAGGCCTGATCTGAAGA+AGG | - | chr8.4:75877363-75877382 | MS.gene36570:CDS | 50.0% | |
| GCCTGCTGGTAAAGATCAGT+CGG | - | chr8.4:75876373-75876392 | MS.gene36570:CDS | 50.0% | |
| GGCAAAGGCCGTTCAAAATC+AGG | - | chr8.4:75876484-75876503 | MS.gene36570:CDS | 50.0% | |
| GTGTTCCCTTGAAAAGGACC+TGG | - | chr8.4:75876708-75876727 | MS.gene36570:intron | 50.0% | |
| TCATGAAGAAGGAGTTCCGC+AGG | - | chr8.4:75876459-75876478 | MS.gene36570:CDS | 50.0% | |
| TGAAGAAGGCAGCTCTTGCA+AGG | - | chr8.4:75877377-75877396 | MS.gene36570:CDS | 50.0% | |
| ! | GAAGGCTTGTTCTGCTTCCT+TGG | + | chr8.4:75876419-75876438 | None:intergenic | 50.0% |
| ACTGTGACCATTCAGCCTGC+TGG | - | chr8.4:75876359-75876378 | MS.gene36570:CDS | 55.0% | |
| ATCTCCCATATGAGTGGCCC+TGG | + | chr8.4:75875394-75875413 | None:intergenic | 55.0% | |
| CACCGGACTTGGCAACTTTG+AGG | + | chr8.4:75877423-75877442 | None:intergenic | 55.0% | |
| CAGTACCAGGGCCACTCATA+TGG | - | chr8.4:75875386-75875405 | MS.gene36570:CDS | 55.0% | |
| CCTCTTCTTGACACCGGACT+TGG | + | chr8.4:75877434-75877453 | None:intergenic | 55.0% | |
| GAAGAAGGAGTTCCGCAGGA+TGG | - | chr8.4:75876463-75876482 | MS.gene36570:CDS | 55.0% | |
| ! | CCAAGTCCGGTGTCAAGAAG+AGG | - | chr8.4:75877431-75877450 | MS.gene36570:CDS | 55.0% |
| GAACGGCCTTTGCCATCCTG+CGG | + | chr8.4:75876478-75876497 | None:intergenic | 60.0% | |
| GGAGTTCCGCAGGATGGCAA+AGG | - | chr8.4:75876469-75876488 | MS.gene36570:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 75875379 | 75877468 | 75875379 | ID=MS.gene36570 |
| chr8.4 | mRNA | 75875379 | 75877468 | 75875379 | ID=MS.gene36570.t1;Parent=MS.gene36570 |
| chr8.4 | exon | 75877321 | 75877468 | 75877321 | ID=MS.gene36570.t1.exon1;Parent=MS.gene36570.t1 |
| chr8.4 | CDS | 75877321 | 75877468 | 75877321 | ID=cds.MS.gene36570.t1;Parent=MS.gene36570.t1 |
| chr8.4 | exon | 75876342 | 75876505 | 75876342 | ID=MS.gene36570.t1.exon2;Parent=MS.gene36570.t1 |
| chr8.4 | CDS | 75876342 | 75876505 | 75876342 | ID=cds.MS.gene36570.t1;Parent=MS.gene36570.t1 |
| chr8.4 | exon | 75875379 | 75875498 | 75875379 | ID=MS.gene36570.t1.exon3;Parent=MS.gene36570.t1 |
| chr8.4 | CDS | 75875379 | 75875498 | 75875379 | ID=cds.MS.gene36570.t1;Parent=MS.gene36570.t1 |
| Gene Sequence |
| Protein sequence |
