Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04837.t1 | RHN48157.1 | 88.2 | 764 | 35 | 3 | 1 | 764 | 100 | 808 | 0.00E+00 | 1190.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04837.t1 | Q6CEW9 | 34.6 | 583 | 299 | 15 | 179 | 748 | 302 | 815 | 8.0e-79 | 296.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04837.t1 | A0A396HB47 | 88.2 | 764 | 35 | 3 | 1 | 764 | 100 | 808 | 0.0e+00 | 1190.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04837.t1 | MTR_7g096260 | 88.220 | 764 | 35 | 3 | 1 | 764 | 1 | 709 | 0.0 | 1257 |
| MS.gene04837.t1 | MTR_7g096260 | 88.220 | 764 | 35 | 3 | 1 | 764 | 15 | 723 | 0.0 | 1256 |
| MS.gene04837.t1 | MTR_7g094660 | 79.454 | 769 | 94 | 6 | 1 | 764 | 156 | 865 | 0.0 | 1148 |
| MS.gene04837.t1 | MTR_7g094670 | 68.553 | 636 | 124 | 9 | 1 | 626 | 722 | 1291 | 0.0 | 728 |
| MS.gene04837.t1 | MTR_7g094670 | 65.116 | 559 | 79 | 7 | 197 | 751 | 1227 | 1673 | 0.0 | 651 |
| MS.gene04837.t1 | MTR_2g018390 | 51.089 | 505 | 88 | 6 | 1 | 485 | 75 | 440 | 9.08e-128 | 389 |
| MS.gene04837.t1 | MTR_1g080390 | 23.367 | 398 | 243 | 13 | 177 | 534 | 20 | 395 | 9.23e-16 | 82.4 |
| MS.gene04837.t1 | MTR_1g061870 | 31.088 | 193 | 111 | 7 | 532 | 717 | 94 | 271 | 1.23e-12 | 71.6 |
| MS.gene04837.t1 | MTR_1g097440 | 30.729 | 192 | 115 | 8 | 542 | 727 | 119 | 298 | 4.69e-12 | 70.1 |
| MS.gene04837.t1 | MTR_4g085540 | 29.358 | 218 | 117 | 7 | 536 | 734 | 208 | 407 | 1.65e-11 | 68.2 |
| MS.gene04837.t1 | MTR_7g102730 | 31.088 | 193 | 109 | 8 | 534 | 717 | 89 | 266 | 1.87e-11 | 67.8 |
| MS.gene04837.t1 | MTR_7g102730 | 27.027 | 222 | 127 | 7 | 517 | 719 | 166 | 371 | 6.88e-11 | 66.2 |
| MS.gene04837.t1 | MTR_6g040190 | 31.905 | 210 | 124 | 10 | 542 | 746 | 114 | 309 | 2.69e-11 | 67.4 |
| MS.gene04837.t1 | MTR_8g092550 | 28.497 | 193 | 112 | 7 | 534 | 712 | 196 | 376 | 3.74e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04837.t1 | AT4G19610 | 47.383 | 745 | 293 | 12 | 4 | 734 | 137 | 796 | 0.0 | 600 |
| MS.gene04837.t1 | AT5G08695 | 41.475 | 651 | 287 | 12 | 40 | 668 | 83 | 661 | 2.46e-135 | 416 |
| MS.gene04837.t1 | AT5G05720 | 32.781 | 302 | 139 | 9 | 461 | 753 | 204 | 450 | 1.83e-28 | 119 |
| MS.gene04837.t1 | AT4G34110 | 29.384 | 211 | 112 | 7 | 543 | 734 | 217 | 409 | 1.78e-13 | 74.7 |
| MS.gene04837.t1 | AT4G34110 | 25.543 | 368 | 204 | 14 | 404 | 755 | 19 | 332 | 3.59e-11 | 67.0 |
| MS.gene04837.t1 | AT2G36660 | 24.843 | 318 | 176 | 12 | 423 | 722 | 114 | 386 | 3.40e-12 | 70.5 |
| MS.gene04837.t1 | AT2G23350 | 28.440 | 218 | 119 | 7 | 536 | 734 | 220 | 419 | 1.07e-11 | 68.9 |
| MS.gene04837.t1 | AT1G49760 | 27.519 | 258 | 145 | 10 | 501 | 734 | 179 | 418 | 1.36e-11 | 68.6 |
| MS.gene04837.t1 | AT1G49760 | 27.519 | 258 | 145 | 10 | 501 | 734 | 179 | 418 | 1.36e-11 | 68.6 |
Find 149 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACGTTTCTTATCGGATTT+AGG | 0.149160 | 7.4:+13176378 | None:intergenic |
| CATCTGTTGTCTTGAAATTT+AGG | 0.160094 | 7.4:+13167562 | None:intergenic |
| CTTGCGGAGGGTAAAGTTTA+TGG | 0.210603 | 7.4:-13172367 | MS.gene04837:CDS |
| TGTTACCTGGCTGCAAATTC+TGG | 0.224005 | 7.4:+13175711 | None:intergenic |
| CTTGTGCTCTGGTTAGGTTT+TGG | 0.233207 | 7.4:-13173470 | MS.gene04837:CDS |
| GCAGAGATGTTTGGGAAATT+TGG | 0.242090 | 7.4:-13172277 | MS.gene04837:CDS |
| GTTTGGGAAATTTGGTAGTT+TGG | 0.255183 | 7.4:-13172269 | MS.gene04837:CDS |
| AAGGAAATATGAAATTTAAA+AGG | 0.260205 | 7.4:-13166417 | MS.gene04837:CDS |
| CTTCTTGGGGTTCTTTCAAT+AGG | 0.266349 | 7.4:+13176168 | None:intergenic |
| TTAAAATTGCCAATGAAGTT+TGG | 0.272537 | 7.4:-13166808 | MS.gene04837:CDS |
| AAGTGTTTGCAACGATTTAC+AGG | 0.273150 | 7.4:-13167313 | MS.gene04837:intron |
| ACTCTTGAGCACCACTTCTT+GGG | 0.274073 | 7.4:+13176154 | None:intergenic |
| CTTAAGCTCACGTTTCTTAT+CGG | 0.286303 | 7.4:+13176371 | None:intergenic |
| AGGAGCCCACTCCAAGTATA+AGG | 0.309976 | 7.4:+13168761 | None:intergenic |
| AGAGATTACGTGGTCGAATA+TGG | 0.311251 | 7.4:+13175982 | None:intergenic |
| AATGAACTTGCAGAGATGTT+TGG | 0.316310 | 7.4:-13172286 | MS.gene04837:CDS |
| CACGTTTCTTATCGGATTTA+GGG | 0.316732 | 7.4:+13176379 | None:intergenic |
| TGTTAGTAAAAGTGATTTAC+TGG | 0.319440 | 7.4:-13172503 | MS.gene04837:CDS |
| AACTCTTGAGCACCACTTCT+TGG | 0.320155 | 7.4:+13176153 | None:intergenic |
| GAAACTCCTTTCCTATGTTC+TGG | 0.322089 | 7.4:+13176036 | None:intergenic |
| GCAGCAACATCATCAGCTTC+TGG | 0.325515 | 7.4:+13172478 | None:intergenic |
| CAACCAAGCAACATTGAATA+AGG | 0.334117 | 7.4:-13176472 | MS.gene04837:CDS |
| ATGAACTTGCAGAGATGTTT+GGG | 0.338200 | 7.4:-13172285 | MS.gene04837:CDS |
| CTATGATTTCCAAACTTCAT+TGG | 0.341580 | 7.4:+13166799 | None:intergenic |
| AGACAGTTATTTAGCCCATT+TGG | 0.354222 | 7.4:-13167030 | MS.gene04837:CDS |
| TTCTTGGGGTTCTTTCAATA+GGG | 0.359760 | 7.4:+13176169 | None:intergenic |
| GTTTGCAACTGATGTACTTT+CGG | 0.364220 | 7.4:+13176446 | None:intergenic |
| GTCGGACAATTCAATCTTCC+AGG | 0.365242 | 7.4:-13174467 | MS.gene04837:CDS |
| TGCTTGGTTGTTAACATCAT+TGG | 0.368860 | 7.4:+13176485 | None:intergenic |
| TGATGGAGTAATCTCTGATA+TGG | 0.381279 | 7.4:-13176346 | MS.gene04837:CDS |
| GGTTTCCTTGTGCTCTGGTT+AGG | 0.386017 | 7.4:-13173476 | MS.gene04837:CDS |
| GGGAGGGTTTCCTTGTGCTC+TGG | 0.399543 | 7.4:-13173481 | MS.gene04837:intron |
| TGTTGTCTCTTCTGTTGTTA+AGG | 0.399668 | 7.4:-13175091 | MS.gene04837:CDS |
| AATTTAGGTTCTTGACAAAC+AGG | 0.403067 | 7.4:+13167577 | None:intergenic |
| ATGAATATAAGCTATTCCTT+TGG | 0.407937 | 7.4:+13175743 | None:intergenic |
| GTCTCTTCTGTTGTTAAGGA+TGG | 0.409210 | 7.4:-13175087 | MS.gene04837:CDS |
| GAAGAGCATTTCAGTCAGTT+TGG | 0.410037 | 7.4:-13175813 | MS.gene04837:CDS |
| CTTTCAAGCACCCACTTGTA+TGG | 0.415787 | 7.4:-13166718 | MS.gene04837:CDS |
| TCTTGTCTTGGTAAATTAGC+TGG | 0.416143 | 7.4:+13174424 | None:intergenic |
| TGTTGCTGCAAATGTTGCTC+TGG | 0.423211 | 7.4:-13172464 | MS.gene04837:CDS |
| ATAGTAATCACCTGGCCAAA+TGG | 0.426128 | 7.4:+13167015 | None:intergenic |
| ACTTGTGAGTCGCTTAAGAT+AGG | 0.434521 | 7.4:+13176420 | None:intergenic |
| CTGTTGCAGTGAGGAGGAAC+TGG | 0.438578 | 7.4:-13175835 | MS.gene04837:intron |
| TCTCCTTATTCAATGTTGCT+TGG | 0.450137 | 7.4:+13176469 | None:intergenic |
| TGGAGTGAATGTGGAGTCTT+CGG | 0.457021 | 7.4:-13172395 | MS.gene04837:CDS |
| CAGGAGGCACAAAATGCTCT+TGG | 0.459330 | 7.4:-13166745 | MS.gene04837:CDS |
| GCTCAATTTAATGAACATAG+TGG | 0.467944 | 7.4:-13166493 | MS.gene04837:CDS |
| ATTCACTTGAGACTTATCAT+TGG | 0.468768 | 7.4:+13176089 | None:intergenic |
| GTTATTTAGCCCATTTGGCC+AGG | 0.472872 | 7.4:-13167025 | MS.gene04837:intron |
| GACAACAGATGAGGGTTTGA+GGG | 0.476637 | 7.4:-13167550 | MS.gene04837:CDS |
| AAAGCAGCTTTAGCTTCTGC+TGG | 0.476978 | 7.4:+13169542 | None:intergenic |
| TAGTAATCACCTGGCCAAAT+GGG | 0.481132 | 7.4:+13167016 | None:intergenic |
| ATCAGATATTGATATTGATC+CGG | 0.482187 | 7.4:-13168631 | MS.gene04837:CDS |
| GGGTGCATCACTTGTTGAAG+AGG | 0.483569 | 7.4:-13173433 | MS.gene04837:CDS |
| TGTGGAGTATGTTACTCAGC+AGG | 0.483709 | 7.4:-13166764 | MS.gene04837:CDS |
| CCACTTGTATGGCAGACATC+TGG | 0.484106 | 7.4:-13166707 | MS.gene04837:intron |
| ATACTAACTTATCCAAGAAA+AGG | 0.484272 | 7.4:-13166462 | MS.gene04837:CDS |
| AGACAACAGATGAGGGTTTG+AGG | 0.485163 | 7.4:-13167551 | MS.gene04837:CDS |
| TTCTTCAGGTCATGCAACCT+CGG | 0.490613 | 7.4:-13176548 | None:intergenic |
| AACAACGAAGAGAGGAAGAA+AGG | 0.496906 | 7.4:-13173744 | MS.gene04837:CDS |
| TGCTCCCTTATACTTGGAGT+GGG | 0.497665 | 7.4:-13168766 | MS.gene04837:CDS |
| TCAGTTTGGCAGTGTCTCAC+AGG | 0.497833 | 7.4:-13175799 | MS.gene04837:CDS |
| CTCTTGAGCACCACTTCTTG+GGG | 0.499235 | 7.4:+13176155 | None:intergenic |
| TATTGATCCGGACAGAATAG+AGG | 0.504104 | 7.4:-13168619 | MS.gene04837:intron |
| TGGTCGAATATGGCAGATTA+CGG | 0.507492 | 7.4:+13175992 | None:intergenic |
| TAGGGCTGCTCCCTTATACT+TGG | 0.507845 | 7.4:-13168772 | MS.gene04837:CDS |
| GTCTCAAGTGAATGCAATTG+AGG | 0.508138 | 7.4:-13176079 | MS.gene04837:CDS |
| TCTTCAGGTCATGCAACCTC+GGG | 0.508661 | 7.4:-13176547 | None:intergenic |
| GAACACAAACAAGACACTCT+TGG | 0.509525 | 7.4:+13175060 | None:intergenic |
| GGTTCATTTGCTTGTTCATG+AGG | 0.514266 | 7.4:-13175778 | MS.gene04837:CDS |
| CCAACATTCTTGACATGACA+AGG | 0.514376 | 7.4:+13167141 | None:intergenic |
| GGTCAAACCTCTATTCTGTC+CGG | 0.514475 | 7.4:+13168612 | None:intergenic |
| AGGAAAGCAGCTGAAGCTAA+AGG | 0.515410 | 7.4:-13173724 | MS.gene04837:CDS |
| CAGTTCCAGAATTTGCAGCC+AGG | 0.515828 | 7.4:-13175716 | MS.gene04837:intron |
| GAAGACCAAGAAAATACTGT+TGG | 0.520732 | 7.4:-13176123 | MS.gene04837:CDS |
| TTTCAGTAAACACATGAAAG+AGG | 0.521106 | 7.4:-13167523 | MS.gene04837:CDS |
| AGTGAATGCAATTGAGGAAG+AGG | 0.522200 | 7.4:-13176073 | MS.gene04837:CDS |
| ATGAAGTTTGGAAATCATAG+AGG | 0.524093 | 7.4:-13166796 | MS.gene04837:CDS |
| GGTGCATCACTTGTTGAAGA+GGG | 0.524790 | 7.4:-13173432 | MS.gene04837:CDS |
| GAATGATGGAATTGCTGAAA+AGG | 0.528711 | 7.4:-13168694 | MS.gene04837:CDS |
| AGAGAGCCTTACTCTTGTCT+TGG | 0.528907 | 7.4:+13174412 | None:intergenic |
| GGAGCCCACTCCAAGTATAA+GGG | 0.529811 | 7.4:+13168762 | None:intergenic |
| CCAAGAAAATACTGTTGGAA+AGG | 0.530760 | 7.4:-13176118 | MS.gene04837:CDS |
| AAAAGAAGGTGAGAGTTTGA+AGG | 0.532141 | 7.4:-13166536 | MS.gene04837:CDS |
| GAATAGTCTGTTCATGCGCC+AGG | 0.533487 | 7.4:-13173686 | MS.gene04837:CDS |
| CTGCTCCCTTATACTTGGAG+TGG | 0.533683 | 7.4:-13168767 | MS.gene04837:CDS |
| AAACGTGAGCTTAAGCATGA+TGG | 0.535732 | 7.4:-13176363 | MS.gene04837:CDS |
| TGGCGATGACAACAGTGATT+CGG | 0.537975 | 7.4:-13176262 | MS.gene04837:CDS |
| GCCATCAGTATGTTAGATGA+AGG | 0.538296 | 7.4:-13166436 | MS.gene04837:CDS |
| GTGATTGAGAGAGCAAAAGA+AGG | 0.540455 | 7.4:-13166550 | MS.gene04837:CDS |
| CCTTGTCATGTCAAGAATGT+TGG | 0.540487 | 7.4:-13167141 | MS.gene04837:CDS |
| CTCGACAAGAACATTGGCCC+TGG | 0.547145 | 7.4:-13172230 | MS.gene04837:intron |
| GTGAGTCGCTTAAGATAGGA+TGG | 0.549371 | 7.4:+13176424 | None:intergenic |
| TCCTTCATCTAACATACTGA+TGG | 0.552737 | 7.4:+13166435 | None:intergenic |
| AAATTTGCCATATGGTGCTA+CGG | 0.556219 | 7.4:-13172311 | MS.gene04837:CDS |
| GTGAATGCAATTGAGGAAGA+GGG | 0.558261 | 7.4:-13176072 | MS.gene04837:CDS |
| AATTATCAAATCCAGAACAT+AGG | 0.558830 | 7.4:-13176047 | MS.gene04837:CDS |
| CTCGGGCAATGTCTAAGCTG+TGG | 0.560677 | 7.4:-13176530 | MS.gene04837:CDS |
| GTCTTCGGAGGAGCTTGCGG+AGG | 0.561229 | 7.4:-13172380 | MS.gene04837:CDS |
| TTGGCAGACATGTGATGGGT+TGG | 0.562983 | 7.4:-13175122 | MS.gene04837:intron |
| TAAGGAAACATACTGTATCC+TGG | 0.563109 | 7.4:+13173668 | None:intergenic |
| GAACAGACTATTCCATGCTC+TGG | 0.563315 | 7.4:+13173696 | None:intergenic |
| TAACATGCAATAATCTCCCC+TGG | 0.565672 | 7.4:+13174449 | None:intergenic |
| AGTGATATTAGAGAAAGATG+TGG | 0.567788 | 7.4:-13168661 | MS.gene04837:CDS |
| GTTATTCTGTTGCAGTGAGG+AGG | 0.574934 | 7.4:-13175841 | MS.gene04837:intron |
| AGATTACAGAAAACGTTACT+CGG | 0.575640 | 7.4:-13172534 | MS.gene04837:CDS |
| AGGGCCAATGTTCTTGTCGA+GGG | 0.575749 | 7.4:+13172232 | None:intergenic |
| GTTGCTGCAAATGTTGCTCT+GGG | 0.579706 | 7.4:-13172463 | MS.gene04837:CDS |
| TCACAATGGATATTTCATTG+AGG | 0.583099 | 7.4:-13173399 | MS.gene04837:intron |
| AACTCTCAAACAACGAAGAG+AGG | 0.585064 | 7.4:-13173752 | MS.gene04837:CDS |
| TCGGGCAATGTCTAAGCTGT+GGG | 0.586421 | 7.4:-13176529 | MS.gene04837:CDS |
| TCGGACAATTCAATCTTCCA+GGG | 0.587035 | 7.4:-13174466 | MS.gene04837:CDS |
| CCAGATGTCTGCCATACAAG+TGG | 0.588396 | 7.4:+13166707 | None:intergenic |
| AATTTCAAGACAACAGATGA+GGG | 0.589469 | 7.4:-13167558 | MS.gene04837:CDS |
| ATTGAAAGAACCCCAAGAAG+TGG | 0.590316 | 7.4:-13176165 | MS.gene04837:CDS |
| GGTTATATGTTGTAGGAACA+AGG | 0.592305 | 7.4:-13173788 | MS.gene04837:intron |
| TCTCCCCTCGACAAGAACAT+TGG | 0.594980 | 7.4:-13172236 | MS.gene04837:CDS |
| TATCAGGGCGCTAGAAGAGT+CGG | 0.598556 | 7.4:-13174485 | MS.gene04837:intron |
| GAAAACGTTACTCGGAAACA+TGG | 0.599656 | 7.4:-13172526 | MS.gene04837:CDS |
| GTGTATTGGCAGACATGTGA+TGG | 0.601599 | 7.4:-13175127 | MS.gene04837:intron |
| TTCAGTAAACACATGAAAGA+GGG | 0.602870 | 7.4:-13167522 | MS.gene04837:CDS |
| GTAAACACATGAAAGAGGGA+TGG | 0.604348 | 7.4:-13167518 | MS.gene04837:CDS |
| CAGGGCCAATGTTCTTGTCG+AGG | 0.608873 | 7.4:+13172231 | None:intergenic |
| CAAAACCTAACCAGAGCACA+AGG | 0.609849 | 7.4:+13173471 | None:intergenic |
| TAACTTATCCAAGAAAAGGA+AGG | 0.610315 | 7.4:-13166458 | MS.gene04837:CDS |
| GAGGATACAAAACGATCCAA+AGG | 0.611415 | 7.4:-13175759 | MS.gene04837:CDS |
| CTAAAGGAGATACCAGAGCA+TGG | 0.614779 | 7.4:-13173708 | MS.gene04837:CDS |
| AAATTTCAAGACAACAGATG+AGG | 0.617949 | 7.4:-13167559 | MS.gene04837:CDS |
| TCAAATCCAGAACATAGGAA+AGG | 0.624200 | 7.4:-13176042 | MS.gene04837:CDS |
| TTTGGGCTAAGAACATCGGA+AGG | 0.628067 | 7.4:+13168741 | None:intergenic |
| TTTCAAGAGCAAATTGACAA+CGG | 0.632803 | 7.4:-13176319 | MS.gene04837:CDS |
| GGAGTCTTCGGAGGAGCTTG+CGG | 0.633050 | 7.4:-13172383 | MS.gene04837:CDS |
| CAGATGTCTGCCATACAAGT+GGG | 0.638287 | 7.4:+13166708 | None:intergenic |
| ATTTAGGTTCTTGACAAACA+GGG | 0.641727 | 7.4:+13167578 | None:intergenic |
| GTTAGTAAAAGTGATTTACT+GGG | 0.646285 | 7.4:-13172502 | MS.gene04837:CDS |
| TCTTCGGAGGAGCTTGCGGA+GGG | 0.651971 | 7.4:-13172379 | MS.gene04837:CDS |
| GGGCCAATGTTCTTGTCGAG+GGG | 0.659968 | 7.4:+13172233 | None:intergenic |
| TGAATGCAATTGAGGAAGAG+GGG | 0.661757 | 7.4:-13176071 | MS.gene04837:CDS |
| AGGGTTGTTCAGTCTCACAA+TGG | 0.669104 | 7.4:-13173413 | MS.gene04837:CDS |
| CACAGCTTAGACATTGCCCG+AGG | 0.675080 | 7.4:+13176531 | None:intergenic |
| TGTATTGGCAGACATGTGAT+GGG | 0.677094 | 7.4:-13175126 | MS.gene04837:intron |
| AGTGAATGTGGAGTCTTCGG+AGG | 0.678167 | 7.4:-13172392 | MS.gene04837:CDS |
| TGTTGTAGGAACAAGGACCA+AGG | 0.702281 | 7.4:-13173781 | MS.gene04837:intron |
| GGAGTATGTTACTCAGCAGG+AGG | 0.710455 | 7.4:-13166761 | MS.gene04837:CDS |
| TTACGGACAAACAGTCGACA+CGG | 0.713491 | 7.4:+13176009 | None:intergenic |
| CGGACAATTCAATCTTCCAG+GGG | 0.713830 | 7.4:-13174465 | MS.gene04837:CDS |
| ACTGAACATGAAGAAAATCG+TGG | 0.715114 | 7.4:-13176198 | MS.gene04837:CDS |
| GAAAGCAGTGATGATGACAA+TGG | 0.725829 | 7.4:-13176282 | MS.gene04837:CDS |
| AGAGCAAATTGACAACGGAG+TGG | 0.732742 | 7.4:-13176314 | MS.gene04837:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 13166408 | 13176559 | 13166408 | ID=MS.gene04837 |
| chr7.4 | mRNA | 13166408 | 13176559 | 13166408 | ID=MS.gene04837.t1;Parent=MS.gene04837 |
| chr7.4 | exon | 13175991 | 13176559 | 13175991 | ID=MS.gene04837.t1.exon1;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13175991 | 13176559 | 13175991 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13175717 | 13175848 | 13175717 | ID=MS.gene04837.t1.exon2;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13175717 | 13175848 | 13175717 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13175075 | 13175137 | 13175075 | ID=MS.gene04837.t1.exon3;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13175075 | 13175137 | 13175075 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13174424 | 13174501 | 13174424 | ID=MS.gene04837.t1.exon4;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13174424 | 13174501 | 13174424 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13173681 | 13173795 | 13173681 | ID=MS.gene04837.t1.exon5;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13173681 | 13173795 | 13173681 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13173400 | 13173498 | 13173400 | ID=MS.gene04837.t1.exon6;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13173400 | 13173498 | 13173400 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13172231 | 13172554 | 13172231 | ID=MS.gene04837.t1.exon7;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13172231 | 13172554 | 13172231 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13169515 | 13169579 | 13169515 | ID=MS.gene04837.t1.exon8;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13169515 | 13169579 | 13169515 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13168620 | 13168791 | 13168620 | ID=MS.gene04837.t1.exon9;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13168620 | 13168791 | 13168620 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13167503 | 13167607 | 13167503 | ID=MS.gene04837.t1.exon10;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13167503 | 13167607 | 13167503 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13167314 | 13167415 | 13167314 | ID=MS.gene04837.t1.exon11;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13167314 | 13167415 | 13167314 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13167026 | 13167199 | 13167026 | ID=MS.gene04837.t1.exon12;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13167026 | 13167199 | 13167026 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13166708 | 13166839 | 13166708 | ID=MS.gene04837.t1.exon13;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13166708 | 13166839 | 13166708 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| chr7.4 | exon | 13166408 | 13166572 | 13166408 | ID=MS.gene04837.t1.exon14;Parent=MS.gene04837.t1 |
| chr7.4 | CDS | 13166408 | 13166572 | 13166408 | ID=cds.MS.gene04837.t1;Parent=MS.gene04837.t1 |
| Gene Sequence |
| Protein sequence |