Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011648.t1 | XP_003608627.1 | 88.2 | 502 | 43 | 1 | 1 | 486 | 1 | 502 | 3.70E-246 | 860.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011648.t1 | O49696 | 58.8 | 546 | 146 | 10 | 1 | 485 | 1 | 528 | 1.2e-160 | 567.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011648.t1 | G7JGH1 | 88.2 | 502 | 43 | 1 | 1 | 486 | 1 | 502 | 2.7e-246 | 860.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46347 | MS.gene011648 | PPI |
| MS.gene011648 | MS.gene059674 | PPI |
| MS.gene011649 | MS.gene011648 | PPI |
| MS.gene011648 | MS.gene058006 | PPI |
| MS.gene60398 | MS.gene011648 | PPI |
| MS.gene011648 | MS.gene21471 | PPI |
| MS.gene019141 | MS.gene011648 | PPI |
| MS.gene011648 | MS.gene46346 | PPI |
| MS.gene011648 | MS.gene60397 | PPI |
| MS.gene058007 | MS.gene011648 | PPI |
| MS.gene011647 | MS.gene011648 | PPI |
| MS.gene60397 | MS.gene011648 | PPI |
| MS.gene011648 | MS.gene011649 | PPI |
| MS.gene011648 | MS.gene60396 | PPI |
| MS.gene011648 | MS.gene015314 | PPI |
| MS.gene011648 | MS.gene09658 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011648.t1 | MTR_4g098570 | 91.650 | 503 | 26 | 1 | 1 | 487 | 1 | 503 | 0.0 | 912 |
| MS.gene011648.t1 | MTR_4g098610 | 86.083 | 503 | 54 | 1 | 1 | 487 | 1 | 503 | 0.0 | 814 |
| MS.gene011648.t1 | MTR_5g014310 | 70.881 | 522 | 113 | 7 | 1 | 487 | 1 | 518 | 0.0 | 704 |
| MS.gene011648.t1 | MTR_1g115175 | 58.384 | 495 | 176 | 5 | 16 | 485 | 5 | 494 | 0.0 | 552 |
| MS.gene011648.t1 | MTR_1g115140 | 55.578 | 502 | 196 | 4 | 9 | 485 | 1 | 500 | 0.0 | 545 |
| MS.gene011648.t1 | MTR_1g115190 | 56.349 | 504 | 188 | 5 | 11 | 485 | 1 | 501 | 0.0 | 523 |
| MS.gene011648.t1 | MTR_1g077670 | 33.195 | 482 | 243 | 9 | 25 | 485 | 23 | 446 | 2.93e-84 | 268 |
| MS.gene011648.t1 | MTR_1g077660 | 38.333 | 360 | 199 | 4 | 41 | 383 | 38 | 391 | 1.74e-83 | 266 |
| MS.gene011648.t1 | MTR_4g051575 | 42.090 | 335 | 172 | 4 | 49 | 365 | 41 | 371 | 7.50e-82 | 261 |
| MS.gene011648.t1 | MTR_7g106260 | 40.171 | 351 | 184 | 4 | 42 | 373 | 35 | 378 | 1.98e-76 | 248 |
| MS.gene011648.t1 | MTR_8g104110 | 31.309 | 527 | 298 | 12 | 11 | 485 | 37 | 551 | 2.00e-76 | 251 |
| MS.gene011648.t1 | MTR_2g087288 | 40.823 | 316 | 163 | 5 | 49 | 345 | 37 | 347 | 1.49e-75 | 244 |
| MS.gene011648.t1 | MTR_6g084680 | 32.696 | 523 | 274 | 13 | 22 | 485 | 69 | 572 | 1.59e-74 | 246 |
| MS.gene011648.t1 | MTR_8g104130 | 32.317 | 492 | 267 | 10 | 49 | 485 | 59 | 539 | 1.35e-72 | 240 |
| MS.gene011648.t1 | MTR_1g111250 | 34.322 | 472 | 271 | 11 | 48 | 485 | 73 | 539 | 9.08e-72 | 238 |
| MS.gene011648.t1 | MTR_7g094770 | 36.413 | 368 | 190 | 10 | 11 | 351 | 22 | 372 | 2.05e-69 | 228 |
| MS.gene011648.t1 | MTR_2g087285 | 36.416 | 346 | 196 | 5 | 49 | 375 | 37 | 377 | 1.83e-67 | 223 |
| MS.gene011648.t1 | MTR_8g104120 | 30.297 | 538 | 305 | 13 | 4 | 485 | 26 | 549 | 3.26e-65 | 221 |
| MS.gene011648.t1 | MTR_0710s0020 | 58.659 | 179 | 57 | 2 | 16 | 178 | 6 | 183 | 7.80e-60 | 195 |
| MS.gene011648.t1 | MTR_4g051575 | 41.441 | 222 | 124 | 3 | 135 | 354 | 9 | 226 | 5.07e-51 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011648.t1 | AT4G17970 | 58.974 | 546 | 145 | 10 | 1 | 485 | 1 | 528 | 0.0 | 604 |
| MS.gene011648.t1 | AT5G46610 | 56.579 | 532 | 170 | 9 | 1 | 487 | 1 | 516 | 0.0 | 558 |
| MS.gene011648.t1 | AT5G46600 | 55.491 | 519 | 174 | 9 | 18 | 487 | 13 | 523 | 0.0 | 548 |
| MS.gene011648.t1 | AT5G46610 | 54.264 | 516 | 183 | 10 | 1 | 487 | 1 | 492 | 6.66e-178 | 509 |
| MS.gene011648.t1 | AT5G46610 | 54.070 | 516 | 161 | 9 | 1 | 487 | 1 | 469 | 7.74e-177 | 506 |
| MS.gene011648.t1 | AT4G00910 | 33.895 | 475 | 243 | 8 | 29 | 485 | 42 | 463 | 2.89e-87 | 276 |
| MS.gene011648.t1 | AT1G08440 | 40.379 | 317 | 169 | 3 | 49 | 347 | 13 | 327 | 1.50e-77 | 251 |
| MS.gene011648.t1 | AT3G18440 | 32.114 | 492 | 282 | 12 | 45 | 485 | 75 | 565 | 1.80e-73 | 243 |
| MS.gene011648.t1 | AT1G08430 | 37.176 | 347 | 194 | 5 | 49 | 373 | 13 | 357 | 4.46e-71 | 234 |
| MS.gene011648.t1 | AT3G11680 | 38.356 | 365 | 202 | 4 | 27 | 373 | 16 | 375 | 7.81e-71 | 233 |
| MS.gene011648.t1 | AT3G11680 | 38.356 | 365 | 202 | 4 | 27 | 373 | 14 | 373 | 8.71e-71 | 233 |
| MS.gene011648.t1 | AT1G18420 | 31.643 | 493 | 277 | 12 | 46 | 481 | 80 | 569 | 2.18e-68 | 229 |
| MS.gene011648.t1 | AT1G18420 | 31.493 | 489 | 275 | 12 | 50 | 481 | 1 | 486 | 6.69e-67 | 223 |
| MS.gene011648.t1 | AT2G27240 | 37.736 | 318 | 174 | 4 | 49 | 346 | 13 | 326 | 4.32e-66 | 221 |
| MS.gene011648.t1 | AT2G27240 | 35.569 | 343 | 173 | 5 | 49 | 346 | 13 | 352 | 4.37e-63 | 213 |
| MS.gene011648.t1 | AT1G25480 | 28.460 | 513 | 303 | 12 | 30 | 481 | 24 | 533 | 4.19e-61 | 209 |
| MS.gene011648.t1 | AT2G17470 | 30.105 | 475 | 286 | 11 | 49 | 481 | 31 | 501 | 1.77e-60 | 207 |
| MS.gene011648.t1 | AT2G17470 | 30.105 | 475 | 286 | 11 | 49 | 481 | 53 | 523 | 3.94e-60 | 207 |
| MS.gene011648.t1 | AT1G68600 | 29.264 | 516 | 306 | 15 | 20 | 481 | 11 | 521 | 1.13e-58 | 202 |
| MS.gene011648.t1 | AT4G17585 | 43.537 | 147 | 70 | 4 | 1 | 145 | 1 | 136 | 1.91e-20 | 88.2 |
Find 119 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTGGCGAACATGCTATT+TGG | 0.197741 | 8.2:-23716004 | MS.gene011648:CDS |
| TCATAATTCTTCTTTATATA+AGG | 0.201014 | 8.2:+23715194 | None:intergenic |
| CTGTTCAGCTGACACACTTT+TGG | 0.219107 | 8.2:+23713490 | None:intergenic |
| AGGTCTTCCCCTGACCATTT+TGG | 0.239460 | 8.2:+23715023 | None:intergenic |
| CAAAGGTTATAGGGCTGTTT+TGG | 0.251086 | 8.2:-23714791 | MS.gene011648:CDS |
| ATATTGGAGCCACTCTTTAA+AGG | 0.251976 | 8.2:-23716026 | MS.gene011648:CDS |
| GACACTATTAGCAGGATTAT+TGG | 0.267423 | 8.2:-23715710 | MS.gene011648:CDS |
| TGTGGAGAAATTGAAGTTTC+TGG | 0.279380 | 8.2:-23714844 | MS.gene011648:CDS |
| TGTATCATTGCTTTGCATAT+TGG | 0.288825 | 8.2:-23716042 | MS.gene011648:CDS |
| ATAAAGAAGAATTATGATTA+TGG | 0.291591 | 8.2:-23715188 | MS.gene011648:CDS |
| TGGCATACCTTCAATAGATT+TGG | 0.299021 | 8.2:+23714965 | None:intergenic |
| AATGCATGGATCACCCTTCT+TGG | 0.305908 | 8.2:+23716089 | None:intergenic |
| ATTCTTCAGCTTTATTAGAT+TGG | 0.306015 | 8.2:-23713517 | MS.gene011648:CDS |
| GTCTAATATTCAAAGGTTAT+AGG | 0.312644 | 8.2:-23714801 | MS.gene011648:CDS |
| TATTGGAGCCACTCTTTAAA+GGG | 0.320414 | 8.2:-23716025 | MS.gene011648:CDS |
| TGTTAACTGTTTCGAGTTAC+CGG | 0.338096 | 8.2:-23715136 | MS.gene011648:CDS |
| GTTGGGAGCCAAGGCATTCT+AGG | 0.347134 | 8.2:-23714470 | MS.gene011648:CDS |
| TGCTTCTTTGCTTGTGGAAA+CGG | 0.348987 | 8.2:-23713360 | MS.gene011648:CDS |
| CTGTTTGAGAACAGAAATTC+AGG | 0.351569 | 8.2:-23714361 | MS.gene011648:intron |
| GAACTGTTCTTCGCCAATTC+GGG | 0.355284 | 8.2:-23714407 | MS.gene011648:CDS |
| TCTAATATTCAAAGGTTATA+GGG | 0.370610 | 8.2:-23714800 | MS.gene011648:CDS |
| TCAAGGCCATCATGAACTTT+CGG | 0.375694 | 8.2:+23716245 | None:intergenic |
| TGTGGAAACGGTGGCAAAAC+AGG | 0.384099 | 8.2:-23713348 | MS.gene011648:CDS |
| AGATGATCAGAGAGTACTTC+TGG | 0.385017 | 8.2:+23713683 | None:intergenic |
| AAAGGGCTAAATAGAGGATT+GGG | 0.385947 | 8.2:-23715733 | MS.gene011648:CDS |
| TTAGTATTTCCAAAATGGTC+AGG | 0.390261 | 8.2:-23715032 | MS.gene011648:CDS |
| GATTGGCGAACATGCTATTT+GGG | 0.394724 | 8.2:-23716003 | MS.gene011648:CDS |
| GGAACTGTTCTTCGCCAATT+CGG | 0.400591 | 8.2:-23714408 | MS.gene011648:CDS |
| TCTCAACCACGACTCTTCTT+AGG | 0.410653 | 8.2:-23713623 | MS.gene011648:CDS |
| ATTGATGAAGTTGAAGAACT+TGG | 0.413101 | 8.2:-23713317 | MS.gene011648:CDS |
| GGCTGTCATGACTGTCGTCC+TGG | 0.415534 | 8.2:-23715982 | MS.gene011648:CDS |
| CTACCACTGTATACCCGAAT+TGG | 0.422330 | 8.2:+23714394 | None:intergenic |
| GTCGTTAGCTTGGATGTCAT+TGG | 0.426852 | 8.2:+23713598 | None:intergenic |
| GTTCAGCTTGGAAGACTACT+TGG | 0.430183 | 8.2:-23716130 | MS.gene011648:CDS |
| TTAGGCATTACATGCAAGTT+GGG | 0.431560 | 8.2:-23714487 | MS.gene011648:intron |
| TTATGCAAGGGTCCTTGAAC+AGG | 0.434838 | 8.2:+23713777 | None:intergenic |
| TCCTAGCCATAGCCATTTCA+AGG | 0.435967 | 8.2:+23716228 | None:intergenic |
| AAAGAAGCAAAAGCAGCAAA+AGG | 0.440203 | 8.2:+23713374 | None:intergenic |
| GAGCCACTCTTTAAAGGGAT+TGG | 0.444184 | 8.2:-23716020 | MS.gene011648:CDS |
| TTAACAAGTTGAAGGTTAAG+AGG | 0.444355 | 8.2:+23715153 | None:intergenic |
| ATCTGTTCGAGTCCTGTTCA+AGG | 0.445975 | 8.2:-23713789 | MS.gene011648:CDS |
| TTATGCAAAGGGCTAAATAG+AGG | 0.451923 | 8.2:-23715739 | MS.gene011648:CDS |
| TCACCAGGTGTATACTAAAC+AGG | 0.456566 | 8.2:+23713286 | None:intergenic |
| CGAAACAGTTAACAAGTTGA+AGG | 0.456924 | 8.2:+23715145 | None:intergenic |
| GATTATGTTGCAAATGCAAC+TGG | 0.461378 | 8.2:-23715676 | MS.gene011648:intron |
| GTGGCGAAAACCTTGAGAAA+TGG | 0.462619 | 8.2:-23716199 | MS.gene011648:CDS |
| ATTAGGCATTACATGCAAGT+TGG | 0.465059 | 8.2:-23714488 | MS.gene011648:intron |
| CGCTTCTTCACCATAGCCAT+TGG | 0.466959 | 8.2:-23715083 | MS.gene011648:CDS |
| CAAAGGGCTAAATAGAGGAT+TGG | 0.467204 | 8.2:-23715734 | MS.gene011648:CDS |
| AGTTCATGATGGCCTTGAAA+TGG | 0.475586 | 8.2:-23716240 | MS.gene011648:CDS |
| ATCTAATAAAGCTGAAGAAT+CGG | 0.476133 | 8.2:+23713520 | None:intergenic |
| ATTTCCATGTGAGGAGGCTA+TGG | 0.498871 | 8.2:+23713565 | None:intergenic |
| TGTTCAAGGACCCTTGCATA+AGG | 0.500246 | 8.2:-23713775 | MS.gene011648:CDS |
| TACGTTTCTTCCATTTCTCA+AGG | 0.504702 | 8.2:+23716189 | None:intergenic |
| AGTTGAAGAACTTGGGAGGT+TGG | 0.506235 | 8.2:-23713309 | MS.gene011648:CDS |
| GCGCCGACTTCTTATGCTGT+TGG | 0.511246 | 8.2:+23713715 | None:intergenic |
| TTGATGAAGTTGAAGAACTT+GGG | 0.511441 | 8.2:-23713316 | MS.gene011648:CDS |
| GCGGTCATGTGCCATCTTCA+AGG | 0.512120 | 8.2:+23715103 | None:intergenic |
| TACATGCAAGTTGGGAGCCA+AGG | 0.512610 | 8.2:-23714479 | MS.gene011648:CDS |
| GGTTGATCATGCCTTGAAGA+TGG | 0.512628 | 8.2:-23715114 | MS.gene011648:CDS |
| CTTCTCAACACCTTACGTAC+TGG | 0.516064 | 8.2:+23713446 | None:intergenic |
| TAGTATTTCCAAAATGGTCA+GGG | 0.519183 | 8.2:-23715031 | MS.gene011648:CDS |
| AAGACTCATGAAAAGACAAA+TGG | 0.520278 | 8.2:+23715055 | None:intergenic |
| GGACTAGCCAAATCTATTGA+AGG | 0.521984 | 8.2:-23714972 | MS.gene011648:intron |
| TCGCAACAGTATGTAAAAGT+TGG | 0.524892 | 8.2:-23714429 | MS.gene011648:CDS |
| GATCTACAGCCACATATATG+AGG | 0.529363 | 8.2:-23715223 | MS.gene011648:CDS |
| AATGGCACAGCCAATGGCTA+TGG | 0.530289 | 8.2:+23715073 | None:intergenic |
| ATAAACCAACGTTGAATGCA+TGG | 0.532633 | 8.2:+23716075 | None:intergenic |
| AAAGGTTTCCGTGTTCAGCT+TGG | 0.537040 | 8.2:-23716142 | MS.gene011648:CDS |
| CAGGGGCAACTTTATGCAAA+GGG | 0.540538 | 8.2:-23715750 | MS.gene011648:CDS |
| AAGACAAATGGCACAGCCAA+TGG | 0.541186 | 8.2:+23715067 | None:intergenic |
| TGACAGTACCTAGAATGCCT+TGG | 0.545491 | 8.2:+23714462 | None:intergenic |
| TATACAGTGGTAGCTCTACA+TGG | 0.552894 | 8.2:-23714384 | MS.gene011648:CDS |
| TCTGCTGCTAGCCTTATGCA+AGG | 0.556979 | 8.2:+23713764 | None:intergenic |
| GCCTTGAAATGGCTATGGCT+AGG | 0.564062 | 8.2:-23716229 | MS.gene011648:CDS |
| GGATTGGGGACACTATTAGC+AGG | 0.564656 | 8.2:-23715718 | MS.gene011648:CDS |
| AGGAATGAACCTCATATATG+TGG | 0.565860 | 8.2:+23715214 | None:intergenic |
| AACAGGACTCGAACAGATTG+TGG | 0.566642 | 8.2:+23713794 | None:intergenic |
| TGATGGCCTTGAAATGGCTA+TGG | 0.571361 | 8.2:-23716234 | MS.gene011648:CDS |
| AGAACAATTACCAGTACGTA+AGG | 0.571676 | 8.2:-23713456 | MS.gene011648:CDS |
| GCAGGGGCAACTTTATGCAA+AGG | 0.574504 | 8.2:-23715751 | MS.gene011648:intron |
| GCTTACCAGTGTTTCATCTG+TGG | 0.578716 | 8.2:+23714759 | None:intergenic |
| TGGCGAGCATGTCGTTAGCT+TGG | 0.580952 | 8.2:+23713588 | None:intergenic |
| GCCACCATAGCCTCCTCACA+TGG | 0.581248 | 8.2:-23713569 | MS.gene011648:CDS |
| TGGGATGCGATGATCCAAGA+AGG | 0.583906 | 8.2:-23716103 | MS.gene011648:CDS |
| TCTGAAGGTCTAATATTCAA+AGG | 0.583982 | 8.2:-23714808 | MS.gene011648:CDS |
| TGGCCTGTTTAGTATACACC+TGG | 0.584479 | 8.2:-23713289 | MS.gene011648:CDS |
| CTGCAGTGAACTCGAAAACC+AGG | 0.585313 | 8.2:+23715964 | None:intergenic |
| GTGATCCATGCATTCAACGT+TGG | 0.585988 | 8.2:-23716080 | MS.gene011648:CDS |
| TTGCATAAGGCTAGCAGCAG+AGG | 0.586458 | 8.2:-23713762 | MS.gene011648:CDS |
| CTAACAGAAAACTCATCACC+AGG | 0.588666 | 8.2:+23713271 | None:intergenic |
| TTGGAAGACTACTTGGAAGG+TGG | 0.592516 | 8.2:-23716123 | MS.gene011648:CDS |
| TTCTTTGCTTGTGGAAACGG+TGG | 0.592923 | 8.2:-23713357 | MS.gene011648:CDS |
| TGGAAGACTACTTGGAAGGT+GGG | 0.594382 | 8.2:-23716122 | MS.gene011648:CDS |
| GTTAACTGTTTCGAGTTACC+GGG | 0.596470 | 8.2:-23715135 | MS.gene011648:CDS |
| GGTGATATAAAATCATCTGA+AGG | 0.596845 | 8.2:-23714823 | MS.gene011648:CDS |
| AGAGTACTTCTGGTGAGCAA+TGG | 0.604618 | 8.2:+23713693 | None:intergenic |
| AGCTTGGAAGACTACTTGGA+AGG | 0.607923 | 8.2:-23716126 | MS.gene011648:CDS |
| TCGCCAATCCCTTTAAAGAG+TGG | 0.614745 | 8.2:+23716017 | None:intergenic |
| TCCATGTGAGGAGGCTATGG+TGG | 0.615595 | 8.2:+23713568 | None:intergenic |
| CTGCTGCTAGCCTTATGCAA+GGG | 0.615929 | 8.2:+23713765 | None:intergenic |
| AGAAAACTCAAGACTAGCGA+TGG | 0.619274 | 8.2:+23713406 | None:intergenic |
| TCTTCAAGGCATGATCAACC+CGG | 0.621268 | 8.2:+23715117 | None:intergenic |
| GAAGAATTATGATTATGGTG+TGG | 0.626346 | 8.2:-23715183 | MS.gene011648:CDS |
| ATGATTCCGAAAGTTCATGA+TGG | 0.629971 | 8.2:-23716251 | MS.gene011648:CDS |
| TGTGTCAGCTGAACAGACAA+AGG | 0.632803 | 8.2:-23713483 | MS.gene011648:CDS |
| AAAGTCCACAGATGAAACAC+TGG | 0.636939 | 8.2:-23714764 | MS.gene011648:intron |
| AGTATTTCCAAAATGGTCAG+GGG | 0.641349 | 8.2:-23715030 | MS.gene011648:CDS |
| TAGCCAACAGCATAAGAAGT+CGG | 0.647738 | 8.2:-23713718 | MS.gene011648:CDS |
| GTAGTCTTCCAAGCTGAACA+CGG | 0.649319 | 8.2:+23716134 | None:intergenic |
| GGGATGCGATGATCCAAGAA+GGG | 0.652108 | 8.2:-23716102 | MS.gene011648:CDS |
| ATGAAGTTGAAGAACTTGGG+AGG | 0.658776 | 8.2:-23713313 | MS.gene011648:CDS |
| TTGGAGCCTAAGAAGAGTCG+TGG | 0.661184 | 8.2:+23713617 | None:intergenic |
| CAATGGCTATGGTGAAGAAG+CGG | 0.662768 | 8.2:+23715084 | None:intergenic |
| TCGCCAATTCGGGTATACAG+TGG | 0.664124 | 8.2:-23714397 | MS.gene011648:CDS |
| TGAGCTATTTCCATGTGAGG+AGG | 0.664971 | 8.2:+23713559 | None:intergenic |
| AAGGGCTAAATAGAGGATTG+GGG | 0.681886 | 8.2:-23715732 | MS.gene011648:CDS |
| GCTATGGCTAGGAATGAGAG+TGG | 0.689742 | 8.2:-23716218 | MS.gene011648:CDS |
| GAGTGAGCTATTTCCATGTG+AGG | 0.697648 | 8.2:+23713556 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAATATAACTACTATT+TGG | + | chr8.2:23715336-23715355 | None:intergenic | 10.0% |
| !! | AAAATATTCAGTGTATAATA+AGG | - | chr8.2:23714826-23714845 | MS.gene011648:CDS | 15.0% |
| !! | ATAAAGAAGAATTATGATTA+TGG | - | chr8.2:23714349-23714368 | MS.gene011648:intron | 15.0% |
| !! | ATAGTAGTTATATTTATAAG+TGG | - | chr8.2:23715337-23715356 | MS.gene011648:intron | 15.0% |
| !! | GGATAATAAATCAAATTAAA+AGG | + | chr8.2:23715713-23715732 | None:intergenic | 15.0% |
| !! | TAGTAGTTATATTTATAAGT+GGG | - | chr8.2:23715338-23715357 | MS.gene011648:intron | 15.0% |
| !! | TCATAATTCTTCTTTATATA+AGG | + | chr8.2:23714346-23714365 | None:intergenic | 15.0% |
| !!! | ATGACTTTAATTTGTTTTAA+TGG | - | chr8.2:23713764-23713783 | MS.gene011648:CDS | 15.0% |
| !!! | TCTTAAAATTTTCTAAATTG+TGG | + | chr8.2:23715532-23715551 | None:intergenic | 15.0% |
| !! | AATTCCATCAAAGAATATAA+AGG | + | chr8.2:23715298-23715317 | None:intergenic | 20.0% |
| !! | TAACTGTAGAAATATGAAAA+AGG | - | chr8.2:23715558-23715577 | MS.gene011648:intron | 20.0% |
| !! | TATATATTCGATAACCAAAA+CGG | - | chr8.2:23713958-23713977 | MS.gene011648:intron | 20.0% |
| !! | TCTAATATTCAAAGGTTATA+GGG | - | chr8.2:23714737-23714756 | MS.gene011648:intron | 20.0% |
| !! | TTATGAATGTGTTATGAATT+TGG | + | chr8.2:23714595-23714614 | None:intergenic | 20.0% |
| !!! | ATTTGAGAAGTTTAAAACAA+AGG | + | chr8.2:23714014-23714033 | None:intergenic | 20.0% |
| !!! | ATTTTGACAACAAATATTGT+CGG | + | chr8.2:23714149-23714168 | None:intergenic | 20.0% |
| !!! | TGATTGTGTTTTCAATTATT+AGG | - | chr8.2:23715032-23715051 | MS.gene011648:CDS | 20.0% |
| !!! | TTCGATAAAAGTTTTTGAAT+TGG | + | chr8.2:23714258-23714277 | None:intergenic | 20.0% |
| !!! | TTTAATTTGTTTTAATGGCA+GGG | - | chr8.2:23713769-23713788 | MS.gene011648:CDS | 20.0% |
| !!! | TTTGAGAAGTTTAAAACAAA+GGG | + | chr8.2:23714013-23714032 | None:intergenic | 20.0% |
| ! | ACTATTTGGACTAATCAAAA+TGG | + | chr8.2:23715322-23715341 | None:intergenic | 25.0% |
| ! | ATCTAATAAAGCTGAAGAAT+CGG | + | chr8.2:23716020-23716039 | None:intergenic | 25.0% |
| ! | GTCTAATATTCAAAGGTTAT+AGG | - | chr8.2:23714736-23714755 | MS.gene011648:intron | 25.0% |
| ! | TTTGATACCGTCTTAAAATT+TGG | + | chr8.2:23715413-23715432 | None:intergenic | 25.0% |
| !! | AAAACAAAGGGAATTTTTCA+TGG | + | chr8.2:23714001-23714020 | None:intergenic | 25.0% |
| !! | AAGACTATTTGAGTTTAGAT+AGG | + | chr8.2:23713608-23713627 | None:intergenic | 25.0% |
| !! | GTATCTTAACATTTTACTTG+AGG | - | chr8.2:23714635-23714654 | MS.gene011648:intron | 25.0% |
| !! | GTCTTTTAGTATTTCCAAAA+TGG | - | chr8.2:23714500-23714519 | MS.gene011648:intron | 25.0% |
| !! | TTTTGAATTGGTTACAATTG+AGG | + | chr8.2:23714246-23714265 | None:intergenic | 25.0% |
| !!! | ATTCTTCAGCTTTATTAGAT+TGG | - | chr8.2:23716020-23716039 | MS.gene011648:CDS | 25.0% |
| !!! | CTTTAATTTGTTTTAATGGC+AGG | - | chr8.2:23713768-23713787 | MS.gene011648:CDS | 25.0% |
| !!! | TGTGTCAATGAATATTTTTG+TGG | - | chr8.2:23714675-23714694 | MS.gene011648:intron | 25.0% |
| !!! | TTAATTTGTTTTAATGGCAG+GGG | - | chr8.2:23713770-23713789 | MS.gene011648:CDS | 25.0% |
| AAGACTCATGAAAAGACAAA+TGG | + | chr8.2:23714485-23714504 | None:intergenic | 30.0% | |
| AATTCCAAAAGCTAATTCAC+GGG | + | chr8.2:23715375-23715394 | None:intergenic | 30.0% | |
| ACAAATAAATGTGACCGATA+CGG | - | chr8.2:23713666-23713685 | MS.gene011648:CDS | 30.0% | |
| ACTACAAGATAGTGAAAAGA+AGG | + | chr8.2:23714212-23714231 | None:intergenic | 30.0% | |
| ATTGATGAAGTTGAAGAACT+TGG | - | chr8.2:23716220-23716239 | MS.gene011648:CDS | 30.0% | |
| CAATTCCAAAAGCTAATTCA+CGG | + | chr8.2:23715376-23715395 | None:intergenic | 30.0% | |
| CGGTATCAAATTATGTTGTT+AGG | - | chr8.2:23715423-23715442 | MS.gene011648:intron | 30.0% | |
| GAAGAATTATGATTATGGTG+TGG | - | chr8.2:23714354-23714373 | MS.gene011648:intron | 30.0% | |
| GACTTAGTACACATAATTTG+TGG | + | chr8.2:23714902-23714921 | None:intergenic | 30.0% | |
| GATGCCTTTATATTCTTTGA+TGG | - | chr8.2:23715291-23715310 | MS.gene011648:intron | 30.0% | |
| GGTGATATAAAATCATCTGA+AGG | - | chr8.2:23714714-23714733 | MS.gene011648:intron | 30.0% | |
| TAAAAACTGTGGAATGATGA+AGG | + | chr8.2:23714537-23714556 | None:intergenic | 30.0% | |
| TAGTATTTCCAAAATGGTCA+GGG | - | chr8.2:23714506-23714525 | MS.gene011648:intron | 30.0% | |
| TCTGAAGGTCTAATATTCAA+AGG | - | chr8.2:23714729-23714748 | MS.gene011648:intron | 30.0% | |
| TGTATCATTGCTTTGCATAT+TGG | - | chr8.2:23713495-23713514 | MS.gene011648:CDS | 30.0% | |
| TTAGTATTTCCAAAATGGTC+AGG | - | chr8.2:23714505-23714524 | MS.gene011648:intron | 30.0% | |
| TTGATGAAGTTGAAGAACTT+GGG | - | chr8.2:23716221-23716240 | MS.gene011648:CDS | 30.0% | |
| TTGCTATATCGTTTCTATCA+TGG | + | chr8.2:23713724-23713743 | None:intergenic | 30.0% | |
| ! | AAGAAACGTATGCATGTTTT+TGG | - | chr8.2:23713361-23713380 | MS.gene011648:CDS | 30.0% |
| ! | TAACATTAGTAGAACCGTTT+TGG | + | chr8.2:23713975-23713994 | None:intergenic | 30.0% |
| ! | TACCTTTTCATCCATGATAA+TGG | - | chr8.2:23713634-23713653 | MS.gene011648:CDS | 30.0% |
| ! | TCAGGTGCAGTTTTTATAAT+AGG | - | chr8.2:23713935-23713954 | MS.gene011648:intron | 30.0% |
| ! | TCCACAGTTTTTAAACTTGA+AGG | - | chr8.2:23714544-23714563 | MS.gene011648:intron | 30.0% |
| ! | TCCTTCAAGTTTAAAAACTG+TGG | + | chr8.2:23714548-23714567 | None:intergenic | 30.0% |
| ! | TTAACAAGTTGAAGGTTAAG+AGG | + | chr8.2:23714387-23714406 | None:intergenic | 30.0% |
| !! | CCAGAATCCAAATTTTAAGA+CGG | - | chr8.2:23715403-23715422 | MS.gene011648:intron | 30.0% |
| !! | TCATGTTAATTTGTTGTGTC+TGG | - | chr8.2:23714288-23714307 | MS.gene011648:intron | 30.0% |
| !!! | GTATTTTTTCGCCATTATCA+TGG | + | chr8.2:23713648-23713667 | None:intergenic | 30.0% |
| AAAGAAGCAAAAGCAGCAAA+AGG | + | chr8.2:23716166-23716185 | None:intergenic | 35.0% | |
| AAAGGGCTAAATAGAGGATT+GGG | - | chr8.2:23713804-23713823 | MS.gene011648:intron | 35.0% | |
| AATAAGGTCACACTAAAAGC+TGG | - | chr8.2:23714842-23714861 | MS.gene011648:CDS | 35.0% | |
| AGAACAATTACCAGTACGTA+AGG | - | chr8.2:23716081-23716100 | MS.gene011648:CDS | 35.0% | |
| AGGAATGAACCTCATATATG+TGG | + | chr8.2:23714326-23714345 | None:intergenic | 35.0% | |
| AGTATTTCCAAAATGGTCAG+GGG | - | chr8.2:23714507-23714526 | MS.gene011648:intron | 35.0% | |
| AGTTTAGACTTATCTCTGAG+TGG | + | chr8.2:23715464-23715483 | None:intergenic | 35.0% | |
| ATAAACCAACGTTGAATGCA+TGG | + | chr8.2:23713465-23713484 | None:intergenic | 35.0% | |
| ATATTGGAGCCACTCTTTAA+AGG | - | chr8.2:23713511-23713530 | MS.gene011648:CDS | 35.0% | |
| ATGATTCCGAAAGTTCATGA+TGG | - | chr8.2:23713286-23713305 | MS.gene011648:CDS | 35.0% | |
| ATTAGGCATTACATGCAAGT+TGG | - | chr8.2:23715049-23715068 | MS.gene011648:CDS | 35.0% | |
| ATTCCAAAAGCTAATTCACG+GGG | + | chr8.2:23715374-23715393 | None:intergenic | 35.0% | |
| CAGGTACAGATTCACAAAAA+TGG | + | chr8.2:23715236-23715255 | None:intergenic | 35.0% | |
| CCGTCTTAAAATTTGGATTC+TGG | + | chr8.2:23715406-23715425 | None:intergenic | 35.0% | |
| CTGAAATGAAAACAGCATGA+AGG | + | chr8.2:23713919-23713938 | None:intergenic | 35.0% | |
| CTGTTTGAGAACAGAAATTC+AGG | - | chr8.2:23715176-23715195 | MS.gene011648:CDS | 35.0% | |
| GACACTATTAGCAGGATTAT+TGG | - | chr8.2:23713827-23713846 | MS.gene011648:intron | 35.0% | |
| GATATAGCAACATAGACACA+TGG | - | chr8.2:23713734-23713753 | MS.gene011648:CDS | 35.0% | |
| GATTATGTTGCAAATGCAAC+TGG | - | chr8.2:23713861-23713880 | MS.gene011648:intron | 35.0% | |
| TACGTTTCTTCCATTTCTCA+AGG | + | chr8.2:23713351-23713370 | None:intergenic | 35.0% | |
| TATTGGAGCCACTCTTTAAA+GGG | - | chr8.2:23713512-23713531 | MS.gene011648:CDS | 35.0% | |
| TCGCAACAGTATGTAAAAGT+TGG | - | chr8.2:23715108-23715127 | MS.gene011648:CDS | 35.0% | |
| TGAGAACAGAAATTCAGGTA+GGG | - | chr8.2:23715181-23715200 | MS.gene011648:CDS | 35.0% | |
| TGGCATACCTTCAATAGATT+TGG | + | chr8.2:23714575-23714594 | None:intergenic | 35.0% | |
| TGTGGAGAAATTGAAGTTTC+TGG | - | chr8.2:23714693-23714712 | MS.gene011648:intron | 35.0% | |
| TTAGGCATTACATGCAAGTT+GGG | - | chr8.2:23715050-23715069 | MS.gene011648:CDS | 35.0% | |
| TTATGCAAAGGGCTAAATAG+AGG | - | chr8.2:23713798-23713817 | MS.gene011648:CDS | 35.0% | |
| TTGAGAACAGAAATTCAGGT+AGG | - | chr8.2:23715180-23715199 | MS.gene011648:CDS | 35.0% | |
| ! | ACTTTTACATACTGTTGCGA+TGG | + | chr8.2:23715108-23715127 | None:intergenic | 35.0% |
| ! | CGAAACAGTTAACAAGTTGA+AGG | + | chr8.2:23714395-23714414 | None:intergenic | 35.0% |
| ! | CTTTTACATACTGTTGCGAT+GGG | + | chr8.2:23715107-23715126 | None:intergenic | 35.0% |
| ! | TTTTCTAAATTGTGGCGTGA+AGG | + | chr8.2:23715524-23715543 | None:intergenic | 35.0% |
| !! | CTATCTTGTAGTTAGTCTTG+AGG | - | chr8.2:23714220-23714239 | MS.gene011648:intron | 35.0% |
| !! | TGTTAACTGTTTCGAGTTAC+CGG | - | chr8.2:23714401-23714420 | MS.gene011648:CDS | 35.0% |
| !! | TTTTTGGTGAGAGGCTTAAA+AGG | - | chr8.2:23713377-23713396 | MS.gene011648:CDS | 35.0% |
| !!! | CTTCATGCTGTTTTCATTTC+AGG | - | chr8.2:23713917-23713936 | MS.gene011648:intron | 35.0% |
| AAAGTCCACAGATGAAACAC+TGG | - | chr8.2:23714773-23714792 | MS.gene011648:CDS | 40.0% | |
| AAATGTCTCCCGCGTAAAAT+GGG | - | chr8.2:23715493-23715512 | MS.gene011648:intron | 40.0% | |
| AAGGGCTAAATAGAGGATTG+GGG | - | chr8.2:23713805-23713824 | MS.gene011648:intron | 40.0% | |
| ACAGATTGTGGTGTCTGAAA+AGG | + | chr8.2:23715734-23715753 | None:intergenic | 40.0% | |
| AGAAAACTCAAGACTAGCGA+TGG | + | chr8.2:23716134-23716153 | None:intergenic | 40.0% | |
| ATGAAGTTGAAGAACTTGGG+AGG | - | chr8.2:23716224-23716243 | MS.gene011648:CDS | 40.0% | |
| CAAAGGGCTAAATAGAGGAT+TGG | - | chr8.2:23713803-23713822 | MS.gene011648:intron | 40.0% | |
| CGCCATTATCATGGATGAAA+AGG | + | chr8.2:23713639-23713658 | None:intergenic | 40.0% | |
| CTCTCTTTCAATCACATCGA+AGG | + | chr8.2:23714086-23714105 | None:intergenic | 40.0% | |
| GATCTACAGCCACATATATG+AGG | - | chr8.2:23714314-23714333 | MS.gene011648:intron | 40.0% | |
| TAGCCAACAGCATAAGAAGT+CGG | - | chr8.2:23715819-23715838 | MS.gene011648:intron | 40.0% | |
| TCAAGGCCATCATGAACTTT+CGG | + | chr8.2:23713295-23713314 | None:intergenic | 40.0% | |
| TCACCAGGTGTATACTAAAC+AGG | + | chr8.2:23716254-23716273 | None:intergenic | 40.0% | |
| TGAGATACTAAATCGCGATC+AGG | + | chr8.2:23715255-23715274 | None:intergenic | 40.0% | |
| TGCTTCTTTGCTTGTGGAAA+CGG | - | chr8.2:23716177-23716196 | MS.gene011648:CDS | 40.0% | |
| TGTATCCACGTCTAGTAGAA+TGG | - | chr8.2:23715661-23715680 | MS.gene011648:intron | 40.0% | |
| ! | AGTTCATGATGGCCTTGAAA+TGG | - | chr8.2:23713297-23713316 | MS.gene011648:CDS | 40.0% |
| ! | CAAAGGTTATAGGGCTGTTT+TGG | - | chr8.2:23714746-23714765 | MS.gene011648:intron | 40.0% |
| ! | CGATGGCAATTTTACTCATC+TGG | + | chr8.2:23716117-23716136 | None:intergenic | 40.0% |
| ! | GAGATTTTATGGCTGTGTTG+AGG | + | chr8.2:23715898-23715917 | None:intergenic | 40.0% |
| ! | GAGTCGTGGTTGAGATTTTA+TGG | + | chr8.2:23715909-23715928 | None:intergenic | 40.0% |
| ! | GATTGGCGAACATGCTATTT+GGG | - | chr8.2:23713534-23713553 | MS.gene011648:CDS | 40.0% |
| ! | TATACAGTGGTAGCTCTACA+TGG | - | chr8.2:23715153-23715172 | MS.gene011648:CDS | 40.0% |
| ! | TGCTTTTGCTTCTTTGCTTG+TGG | - | chr8.2:23716171-23716190 | MS.gene011648:CDS | 40.0% |
| !! | ACACTAAAAGCTGGTCTTCA+TGG | - | chr8.2:23714851-23714870 | MS.gene011648:CDS | 40.0% |
| !! | AGATGATCAGAGAGTACTTC+TGG | + | chr8.2:23715857-23715876 | None:intergenic | 40.0% |
| !! | CACTAAAAGCTGGTCTTCAT+GGG | - | chr8.2:23714852-23714871 | MS.gene011648:CDS | 40.0% |
| !! | GGACTAGCCAAATCTATTGA+AGG | - | chr8.2:23714565-23714584 | MS.gene011648:intron | 40.0% |
| !! | GTTAACTGTTTCGAGTTACC+GGG | - | chr8.2:23714402-23714421 | MS.gene011648:CDS | 40.0% |
| !! | GTTAATTTGTTGTGTCTGGC+AGG | - | chr8.2:23714292-23714311 | MS.gene011648:intron | 40.0% |
| !!! | GTATGCATGTTTTTGGTGAG+AGG | - | chr8.2:23713368-23713387 | MS.gene011648:CDS | 40.0% |
| AAAGGTTTCCGTGTTCAGCT+TGG | - | chr8.2:23713395-23713414 | MS.gene011648:CDS | 45.0% | |
| AACAGGACTCGAACAGATTG+TGG | + | chr8.2:23715746-23715765 | None:intergenic | 45.0% | |
| AAGACAAATGGCACAGCCAA+TGG | + | chr8.2:23714473-23714492 | None:intergenic | 45.0% | |
| AATGCATGGATCACCCTTCT+TGG | + | chr8.2:23713451-23713470 | None:intergenic | 45.0% | |
| AATGTCTCCCGCGTAAAATG+GGG | - | chr8.2:23715494-23715513 | MS.gene011648:intron | 45.0% | |
| AGCTTGGAAGACTACTTGGA+AGG | - | chr8.2:23713411-23713430 | MS.gene011648:CDS | 45.0% | |
| AGTTGAAGAACTTGGGAGGT+TGG | - | chr8.2:23716228-23716247 | MS.gene011648:CDS | 45.0% | |
| ATCAGCCATTCTACTAGACG+TGG | + | chr8.2:23715669-23715688 | None:intergenic | 45.0% | |
| ATCCACAATTGCTGCCGTAT+CGG | + | chr8.2:23713683-23713702 | None:intergenic | 45.0% | |
| ATCTGTTCGAGTCCTGTTCA+AGG | - | chr8.2:23715748-23715767 | MS.gene011648:CDS | 45.0% | |
| ATTTCCATGTGAGGAGGCTA+TGG | + | chr8.2:23715975-23715994 | None:intergenic | 45.0% | |
| CAAATGTCTCCCGCGTAAAA+TGG | - | chr8.2:23715492-23715511 | MS.gene011648:intron | 45.0% | |
| CAATGGCTATGGTGAAGAAG+CGG | + | chr8.2:23714456-23714475 | None:intergenic | 45.0% | |
| CAGGGGCAACTTTATGCAAA+GGG | - | chr8.2:23713787-23713806 | MS.gene011648:CDS | 45.0% | |
| CTACCACTGTATACCCGAAT+TGG | + | chr8.2:23715146-23715165 | None:intergenic | 45.0% | |
| CTTCTCAACACCTTACGTAC+TGG | + | chr8.2:23716094-23716113 | None:intergenic | 45.0% | |
| GAACTGTTCTTCGCCAATTC+GGG | - | chr8.2:23715130-23715149 | MS.gene011648:CDS | 45.0% | |
| GCTTACCAGTGTTTCATCTG+TGG | + | chr8.2:23714781-23714800 | None:intergenic | 45.0% | |
| GGAACTGTTCTTCGCCAATT+CGG | - | chr8.2:23715129-23715148 | MS.gene011648:CDS | 45.0% | |
| GGTTGATCATGCCTTGAAGA+TGG | - | chr8.2:23714423-23714442 | MS.gene011648:CDS | 45.0% | |
| GTAGTCTTCCAAGCTGAACA+CGG | + | chr8.2:23713406-23713425 | None:intergenic | 45.0% | |
| GTGATCCATGCATTCAACGT+TGG | - | chr8.2:23713457-23713476 | MS.gene011648:CDS | 45.0% | |
| GTGGCGAAAACCTTGAGAAA+TGG | - | chr8.2:23713338-23713357 | MS.gene011648:CDS | 45.0% | |
| GTTCAGCTTGGAAGACTACT+TGG | - | chr8.2:23713407-23713426 | MS.gene011648:CDS | 45.0% | |
| TCCTAGCCATAGCCATTTCA+AGG | + | chr8.2:23713312-23713331 | None:intergenic | 45.0% | |
| TCTCAACCACGACTCTTCTT+AGG | - | chr8.2:23715914-23715933 | MS.gene011648:intron | 45.0% | |
| TCTTCAAGGCATGATCAACC+CGG | + | chr8.2:23714423-23714442 | None:intergenic | 45.0% | |
| TGACAGTACCTAGAATGCCT+TGG | + | chr8.2:23715078-23715097 | None:intergenic | 45.0% | |
| TGGAAGACTACTTGGAAGGT+GGG | - | chr8.2:23713415-23713434 | MS.gene011648:CDS | 45.0% | |
| TGGCCTGTTTAGTATACACC+TGG | - | chr8.2:23716248-23716267 | MS.gene011648:CDS | 45.0% | |
| TGTGTCAGCTGAACAGACAA+AGG | - | chr8.2:23716054-23716073 | MS.gene011648:CDS | 45.0% | |
| TGTTCAAGGACCCTTGCATA+AGG | - | chr8.2:23715762-23715781 | MS.gene011648:intron | 45.0% | |
| TTATGCAAGGGTCCTTGAAC+AGG | + | chr8.2:23715763-23715782 | None:intergenic | 45.0% | |
| TTCTTTGCTTGTGGAAACGG+TGG | - | chr8.2:23716180-23716199 | MS.gene011648:CDS | 45.0% | |
| TTGGAAGACTACTTGGAAGG+TGG | - | chr8.2:23713414-23713433 | MS.gene011648:CDS | 45.0% | |
| ! | AAGGTTGTCCCCATTTTACG+CGG | + | chr8.2:23715505-23715524 | None:intergenic | 45.0% |
| ! | AGAGTACTTCTGGTGAGCAA+TGG | + | chr8.2:23715847-23715866 | None:intergenic | 45.0% |
| ! | CATTTTACGCGGGAGACATT+TGG | + | chr8.2:23715494-23715513 | None:intergenic | 45.0% |
| ! | CTGTTCAGCTGACACACTTT+TGG | + | chr8.2:23716050-23716069 | None:intergenic | 45.0% |
| ! | GAGCCACTCTTTAAAGGGAT+TGG | - | chr8.2:23713517-23713536 | MS.gene011648:CDS | 45.0% |
| ! | GAGTGAGCTATTTCCATGTG+AGG | + | chr8.2:23715984-23716003 | None:intergenic | 45.0% |
| ! | GGATTGGCGAACATGCTATT+TGG | - | chr8.2:23713533-23713552 | MS.gene011648:CDS | 45.0% |
| ! | GTCGTTAGCTTGGATGTCAT+TGG | + | chr8.2:23715942-23715961 | None:intergenic | 45.0% |
| ! | TCGCCAATCCCTTTAAAGAG+TGG | + | chr8.2:23713523-23713542 | None:intergenic | 45.0% |
| ! | TGAGCTATTTCCATGTGAGG+AGG | + | chr8.2:23715981-23716000 | None:intergenic | 45.0% |
| ! | TGATGGCCTTGAAATGGCTA+TGG | - | chr8.2:23713303-23713322 | MS.gene011648:CDS | 45.0% |
| !! | TGAATAAATAAATATTTATT+AGG | + | chr8.2:23714958-23714977 | None:intergenic | 5.0% |
| AATGGCACAGCCAATGGCTA+TGG | + | chr8.2:23714467-23714486 | None:intergenic | 50.0% | |
| CCAAAAGCTAATTCACGGGG+TGG | + | chr8.2:23715371-23715390 | None:intergenic | 50.0% | |
| CGCTTCTTCACCATAGCCAT+TGG | - | chr8.2:23714454-23714473 | MS.gene011648:CDS | 50.0% | |
| CTGCAGTGAACTCGAAAACC+AGG | + | chr8.2:23713576-23713595 | None:intergenic | 50.0% | |
| GCAGGGGCAACTTTATGCAA+AGG | - | chr8.2:23713786-23713805 | MS.gene011648:CDS | 50.0% | |
| GCCTTGAAATGGCTATGGCT+AGG | - | chr8.2:23713308-23713327 | MS.gene011648:CDS | 50.0% | |
| GCTATGGCTAGGAATGAGAG+TGG | - | chr8.2:23713319-23713338 | MS.gene011648:CDS | 50.0% | |
| GGATTGGGGACACTATTAGC+AGG | - | chr8.2:23713819-23713838 | MS.gene011648:intron | 50.0% | |
| GGGATGCGATGATCCAAGAA+GGG | - | chr8.2:23713435-23713454 | MS.gene011648:CDS | 50.0% | |
| TCGCCAATTCGGGTATACAG+TGG | - | chr8.2:23715140-23715159 | MS.gene011648:CDS | 50.0% | |
| TGGGATGCGATGATCCAAGA+AGG | - | chr8.2:23713434-23713453 | MS.gene011648:CDS | 50.0% | |
| TGTGGAAACGGTGGCAAAAC+AGG | - | chr8.2:23716189-23716208 | MS.gene011648:CDS | 50.0% | |
| TTACGCGGGAGACATTTGGA+GGG | + | chr8.2:23715490-23715509 | None:intergenic | 50.0% | |
| TTGCATAAGGCTAGCAGCAG+AGG | - | chr8.2:23715775-23715794 | MS.gene011648:intron | 50.0% | |
| TTGGAGCCTAAGAAGAGTCG+TGG | + | chr8.2:23715923-23715942 | None:intergenic | 50.0% | |
| TTTACGCGGGAGACATTTGG+AGG | + | chr8.2:23715491-23715510 | None:intergenic | 50.0% | |
| ! | AGGTCTTCCCCTGACCATTT+TGG | + | chr8.2:23714517-23714536 | None:intergenic | 50.0% |
| ! | AGGTTGTCCCCATTTTACGC+GGG | + | chr8.2:23715504-23715523 | None:intergenic | 50.0% |
| ! | TACATGCAAGTTGGGAGCCA+AGG | - | chr8.2:23715058-23715077 | MS.gene011648:CDS | 50.0% |
| ! | TCTCTGAGTGGCTTGATGAC+AGG | + | chr8.2:23715452-23715471 | None:intergenic | 50.0% |
| !! | CTGCTGCTAGCCTTATGCAA+GGG | + | chr8.2:23715775-23715794 | None:intergenic | 50.0% |
| !! | TCTGCTGCTAGCCTTATGCA+AGG | + | chr8.2:23715776-23715795 | None:intergenic | 50.0% |
| !!! | CCACCCCGTGAATTAGCTTT+TGG | - | chr8.2:23715368-23715387 | MS.gene011648:intron | 50.0% |
| !!! | CTGGTTTTCGAGTTCACTGC+AGG | - | chr8.2:23713574-23713593 | MS.gene011648:CDS | 50.0% |
| GACCGATACGGCAGCAATTG+TGG | - | chr8.2:23713678-23713697 | MS.gene011648:CDS | 55.0% | |
| GCGGTCATGTGCCATCTTCA+AGG | + | chr8.2:23714437-23714456 | None:intergenic | 55.0% | |
| TCCATGTGAGGAGGCTATGG+TGG | + | chr8.2:23715972-23715991 | None:intergenic | 55.0% | |
| TGGCGAGCATGTCGTTAGCT+TGG | + | chr8.2:23715952-23715971 | None:intergenic | 55.0% | |
| ! | GTTGGGAGCCAAGGCATTCT+AGG | - | chr8.2:23715067-23715086 | MS.gene011648:CDS | 55.0% |
| !! | GCGCCGACTTCTTATGCTGT+TGG | + | chr8.2:23715825-23715844 | None:intergenic | 55.0% |
| GCCACCATAGCCTCCTCACA+TGG | - | chr8.2:23715968-23715987 | MS.gene011648:CDS | 60.0% | |
| GGCTGTCATGACTGTCGTCC+TGG | - | chr8.2:23713555-23713574 | MS.gene011648:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 23713286 | 23716273 | 23713286 | ID=MS.gene011648 |
| chr8.2 | mRNA | 23713286 | 23716273 | 23713286 | ID=MS.gene011648.t1;Parent=MS.gene011648 |
| chr8.2 | exon | 23715964 | 23716273 | 23715964 | ID=MS.gene011648.t1.exon1;Parent=MS.gene011648.t1 |
| chr8.2 | CDS | 23715964 | 23716273 | 23715964 | ID=cds.MS.gene011648.t1;Parent=MS.gene011648.t1 |
| chr8.2 | exon | 23715677 | 23715769 | 23715677 | ID=MS.gene011648.t1.exon2;Parent=MS.gene011648.t1 |
| chr8.2 | CDS | 23715677 | 23715769 | 23715677 | ID=cds.MS.gene011648.t1;Parent=MS.gene011648.t1 |
| chr8.2 | exon | 23714973 | 23715245 | 23714973 | ID=MS.gene011648.t1.exon3;Parent=MS.gene011648.t1 |
| chr8.2 | CDS | 23714973 | 23715245 | 23714973 | ID=cds.MS.gene011648.t1;Parent=MS.gene011648.t1 |
| chr8.2 | exon | 23714765 | 23714886 | 23714765 | ID=MS.gene011648.t1.exon4;Parent=MS.gene011648.t1 |
| chr8.2 | CDS | 23714765 | 23714886 | 23714765 | ID=cds.MS.gene011648.t1;Parent=MS.gene011648.t1 |
| chr8.2 | exon | 23714362 | 23714505 | 23714362 | ID=MS.gene011648.t1.exon5;Parent=MS.gene011648.t1 |
| chr8.2 | CDS | 23714362 | 23714505 | 23714362 | ID=cds.MS.gene011648.t1;Parent=MS.gene011648.t1 |
| chr8.2 | exon | 23713286 | 23713819 | 23713286 | ID=MS.gene011648.t1.exon6;Parent=MS.gene011648.t1 |
| chr8.2 | CDS | 23713286 | 23713819 | 23713286 | ID=cds.MS.gene011648.t1;Parent=MS.gene011648.t1 |
| Gene Sequence |
| Protein sequence |
