Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46347.t1 | RXH97009.1 | 73.2 | 742 | 167 | 9 | 1 | 735 | 1 | 717 | 9.70E-307 | 1062.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46347.t1 | O49696 | 61.7 | 549 | 151 | 7 | 1 | 506 | 1 | 533 | 8.3e-174 | 612.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46347.t1 | A0A498JM30 | 73.2 | 742 | 167 | 9 | 1 | 735 | 1 | 717 | 7.0e-307 | 1062.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene46347 | 0.800877 | 1.17E-48 | -1.69E-46 |
| MS.gene049346 | MS.gene46347 | 0.832114 | 1.14E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene46347 | 0.836406 | 9.54E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene46347 | 0.835837 | 1.33E-56 | -1.69E-46 |
| MS.gene049662 | MS.gene46347 | 0.827802 | 1.28E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene46347 | 0.822108 | 2.83E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene46347 | 0.814224 | 1.72E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene46347 | 0.816606 | 5.07E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene46347 | 0.841919 | 3.55E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene46347 | 0.842461 | 2.55E-58 | -1.69E-46 |
| MS.gene050406 | MS.gene46347 | 0.819492 | 1.13E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene46347 | 0.818226 | 2.19E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene46347 | 0.819451 | 1.15E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene46347 | 0.831275 | 1.83E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene46347 | 0.820639 | 6.17E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene46347 | 0.819394 | 1.19E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene46347 | 0.819234 | 1.29E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene46347 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene46347 | 0.830244 | 3.28E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene46347 | 0.802564 | 5.28E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene46347 | -0.804858 | 1.77E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene46347 | 0.849324 | 3.48E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene46347 | 0.823237 | 1.54E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene46347 | 0.850405 | 1.74E-60 | -1.69E-46 |
| MS.gene052310 | MS.gene46347 | 0.836896 | 7.15E-57 | -1.69E-46 |
| MS.gene052322 | MS.gene46347 | 0.851155 | 1.07E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene46347 | 0.835047 | 2.11E-56 | -1.69E-46 |
| MS.gene052421 | MS.gene46347 | 0.81957 | 1.08E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene46347 | 0.835551 | 1.57E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene46347 | 0.807903 | 4.03E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene46347 | 0.849246 | 3.66E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene46347 | 0.845824 | 3.19E-59 | -1.69E-46 |
| MS.gene053209 | MS.gene46347 | 0.827706 | 1.35E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene46347 | 0.817801 | 2.73E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene46347 | 0.801636 | 8.20E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene46347 | 0.80304 | 4.21E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene46347 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene46347 | 0.830211 | 3.34E-55 | -1.69E-46 |
| MS.gene053928 | MS.gene46347 | 0.803885 | 2.82E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene46347 | 0.815807 | 7.65E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene46347 | 0.815494 | 8.98E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene46347 | 0.817421 | 3.33E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene46347 | 0.812423 | 4.27E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene46347 | 0.816077 | 6.66E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene46347 | 0.808511 | 2.99E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene46347 | 0.82776 | 1.31E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene46347 | 0.849809 | 2.55E-60 | -1.69E-46 |
| MS.gene055412 | MS.gene46347 | 0.804596 | 2.00E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene46347 | 0.836919 | 7.06E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene46347 | 0.843812 | 1.11E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene46347 | 0.818761 | 1.66E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene46347 | 0.834237 | 3.37E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene46347 | 0.826602 | 2.48E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene46347 | 0.817389 | 3.38E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene46347 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene056899 | MS.gene46347 | -0.809109 | 2.23E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene46347 | 0.854931 | 8.86E-62 | -1.69E-46 |
| MS.gene057123 | MS.gene46347 | 0.821416 | 4.08E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene46347 | 0.815552 | 8.72E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene46347 | 0.809148 | 2.18E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene46347 | 0.815732 | 7.95E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene46347 | 0.804854 | 1.77E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene46347 | 0.836573 | 8.65E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene46347 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene46347 | 0.803641 | 3.16E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene46347 | 0.819929 | 8.97E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene46347 | 0.832767 | 7.83E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene46347 | 0.921615 | 2.85E-88 | -1.69E-46 |
| MS.gene05811 | MS.gene46347 | 0.828122 | 1.07E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene46347 | 0.821909 | 3.14E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene46347 | 0.836742 | 7.83E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene46347 | 0.84283 | 2.03E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene46347 | 0.83463 | 2.68E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene46347 | 0.834305 | 3.24E-56 | -1.69E-46 |
| MS.gene059141 | MS.gene46347 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene059326 | MS.gene46347 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene46347 | 0.837713 | 4.42E-57 | -1.69E-46 |
| MS.gene059518 | MS.gene46347 | 0.815055 | 1.12E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene46347 | 0.811274 | 7.60E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene46347 | 0.80923 | 2.10E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene46347 | 0.856441 | 3.21E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene46347 | 0.851739 | 7.29E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene46347 | 0.854584 | 1.12E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene46347 | 0.830725 | 2.50E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene46347 | 0.854497 | 1.18E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene46347 | 0.834533 | 2.84E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene46347 | 0.841437 | 4.75E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene46347 | 0.801493 | 8.77E-49 | -1.69E-46 |
| MS.gene060986 | MS.gene46347 | 0.825687 | 4.09E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene46347 | 0.867554 | 1.26E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46347 | MS.gene011648 | PPI |
| MS.gene46347 | MS.gene60398 | PPI |
| MS.gene46347 | MS.gene60396 | PPI |
| MS.gene46347 | MS.gene015314 | PPI |
| MS.gene46347 | MS.gene059674 | PPI |
| MS.gene46347 | MS.gene058006 | PPI |
| MS.gene46347 | MS.gene21471 | PPI |
| MS.gene46347 | MS.gene46346 | PPI |
| MS.gene46347 | MS.gene019141 | PPI |
| MS.gene46347 | MS.gene60397 | PPI |
| MS.gene46347 | MS.gene058007 | PPI |
| MS.gene46347 | MS.gene011649 | PPI |
| MS.gene011647 | MS.gene46347 | PPI |
| MS.gene46347 | MS.gene09658 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46347.t1 | MTR_4g098570 | 90.824 | 534 | 49 | 0 | 1 | 534 | 1 | 534 | 0.0 | 967 |
| MS.gene46347.t1 | MTR_4g098610 | 94.195 | 534 | 31 | 0 | 1 | 534 | 1 | 534 | 0.0 | 962 |
| MS.gene46347.t1 | MTR_5g014310 | 71.971 | 553 | 132 | 7 | 1 | 534 | 1 | 549 | 0.0 | 766 |
| MS.gene46347.t1 | MTR_1g115140 | 56.691 | 538 | 219 | 4 | 9 | 534 | 1 | 536 | 0.0 | 618 |
| MS.gene46347.t1 | MTR_1g115175 | 58.801 | 534 | 199 | 7 | 16 | 534 | 5 | 532 | 0.0 | 611 |
| MS.gene46347.t1 | MTR_1g115190 | 57.974 | 533 | 206 | 5 | 16 | 533 | 6 | 535 | 0.0 | 590 |
| MS.gene46347.t1 | MTR_4g098620 | 98.030 | 203 | 4 | 0 | 533 | 735 | 27 | 229 | 1.07e-143 | 420 |
| MS.gene46347.t1 | MTR_1g077670 | 34.845 | 485 | 253 | 6 | 25 | 504 | 23 | 449 | 5.43e-93 | 298 |
| MS.gene46347.t1 | MTR_1g077660 | 39.678 | 373 | 213 | 3 | 25 | 391 | 17 | 383 | 1.30e-88 | 286 |
| MS.gene46347.t1 | MTR_4g051575 | 40.730 | 356 | 200 | 3 | 34 | 381 | 19 | 371 | 2.40e-83 | 273 |
| MS.gene46347.t1 | MTR_8g104110 | 32.143 | 532 | 311 | 10 | 11 | 505 | 37 | 555 | 2.76e-81 | 270 |
| MS.gene46347.t1 | MTR_2g087288 | 35.529 | 425 | 253 | 8 | 49 | 462 | 37 | 451 | 4.92e-79 | 260 |
| MS.gene46347.t1 | MTR_7g106260 | 41.520 | 342 | 194 | 2 | 49 | 389 | 42 | 378 | 1.01e-78 | 260 |
| MS.gene46347.t1 | MTR_6g084680 | 32.270 | 533 | 301 | 11 | 15 | 505 | 62 | 576 | 2.46e-75 | 255 |
| MS.gene46347.t1 | MTR_1g111250 | 34.232 | 482 | 292 | 11 | 48 | 511 | 73 | 547 | 1.23e-72 | 246 |
| MS.gene46347.t1 | MTR_8g104130 | 33.198 | 494 | 284 | 8 | 49 | 505 | 59 | 543 | 1.92e-72 | 246 |
| MS.gene46347.t1 | MTR_0710s0020 | 66.480 | 179 | 59 | 1 | 16 | 194 | 6 | 183 | 2.12e-72 | 233 |
| MS.gene46347.t1 | MTR_7g094770 | 37.681 | 345 | 196 | 6 | 54 | 389 | 61 | 395 | 2.36e-72 | 242 |
| MS.gene46347.t1 | MTR_2g087285 | 37.791 | 344 | 210 | 3 | 49 | 391 | 37 | 377 | 1.08e-68 | 233 |
| MS.gene46347.t1 | MTR_8g104120 | 30.741 | 540 | 318 | 12 | 7 | 505 | 29 | 553 | 4.30e-68 | 234 |
| MS.gene46347.t1 | MTR_4g051575 | 38.983 | 236 | 139 | 3 | 148 | 381 | 5 | 237 | 5.03e-46 | 167 |
| MS.gene46347.t1 | MTR_1g110380 | 38.235 | 102 | 39 | 2 | 126 | 227 | 6 | 83 | 3.30e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46347.t1 | AT4G17970 | 61.887 | 551 | 147 | 9 | 1 | 506 | 1 | 533 | 0.0 | 649 |
| MS.gene46347.t1 | AT5G46610 | 58.349 | 545 | 191 | 8 | 1 | 519 | 1 | 535 | 0.0 | 605 |
| MS.gene46347.t1 | AT5G46600 | 56.309 | 531 | 189 | 6 | 19 | 516 | 16 | 536 | 0.0 | 582 |
| MS.gene46347.t1 | AT5G46610 | 54.862 | 545 | 186 | 9 | 1 | 519 | 1 | 511 | 0.0 | 551 |
| MS.gene46347.t1 | AT5G46610 | 51.560 | 545 | 181 | 9 | 1 | 519 | 1 | 488 | 7.15e-172 | 503 |
| MS.gene46347.t1 | AT1G32520 | 73.182 | 220 | 55 | 3 | 520 | 735 | 20 | 239 | 3.69e-109 | 332 |
| MS.gene46347.t1 | AT4G00910 | 35.329 | 501 | 265 | 10 | 10 | 505 | 21 | 467 | 4.68e-95 | 304 |
| MS.gene46347.t1 | AT1G08440 | 40.698 | 344 | 199 | 3 | 49 | 389 | 13 | 354 | 8.70e-81 | 266 |
| MS.gene46347.t1 | AT1G08430 | 38.905 | 347 | 204 | 4 | 49 | 389 | 13 | 357 | 7.01e-75 | 251 |
| MS.gene46347.t1 | AT3G11680 | 39.314 | 379 | 219 | 4 | 17 | 389 | 2 | 375 | 2.55e-74 | 249 |
| MS.gene46347.t1 | AT3G11680 | 39.782 | 367 | 207 | 4 | 32 | 389 | 12 | 373 | 2.55e-74 | 249 |
| MS.gene46347.t1 | AT3G18440 | 31.845 | 515 | 310 | 11 | 43 | 518 | 73 | 585 | 7.60e-74 | 251 |
| MS.gene46347.t1 | AT1G18420 | 32.406 | 503 | 292 | 10 | 46 | 505 | 80 | 577 | 2.11e-71 | 244 |
| MS.gene46347.t1 | AT1G18420 | 32.265 | 499 | 290 | 10 | 50 | 505 | 1 | 494 | 9.59e-70 | 237 |
| MS.gene46347.t1 | AT2G27240 | 37.464 | 347 | 206 | 3 | 49 | 389 | 13 | 354 | 1.66e-67 | 231 |
| MS.gene46347.t1 | AT2G17470 | 32.099 | 486 | 300 | 12 | 49 | 508 | 31 | 512 | 7.02e-66 | 228 |
| MS.gene46347.t1 | AT2G17470 | 32.099 | 486 | 300 | 12 | 49 | 508 | 53 | 534 | 1.07e-65 | 228 |
| MS.gene46347.t1 | AT2G27240 | 35.326 | 368 | 211 | 4 | 49 | 389 | 13 | 380 | 1.82e-64 | 223 |
| MS.gene46347.t1 | AT1G68600 | 30.000 | 530 | 328 | 15 | 12 | 505 | 7 | 529 | 5.55e-63 | 220 |
| MS.gene46347.t1 | AT1G25480 | 30.943 | 488 | 303 | 11 | 48 | 505 | 58 | 541 | 1.97e-59 | 210 |
| MS.gene46347.t1 | AT4G17585 | 45.455 | 143 | 65 | 4 | 1 | 141 | 1 | 132 | 2.68e-23 | 97.1 |
Find 164 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCGTGGTGGGCCGCAATT+TGG | 0.091289 | 8.4:-24380259 | MS.gene46347:CDS |
| AATGGAGAAATTGAAGTTTC+TGG | 0.169451 | 8.4:-24383759 | MS.gene46347:CDS |
| CTAGTATAAGCTTGCAATTT+TGG | 0.186690 | 8.4:+24380033 | None:intergenic |
| CTGTTGGAGCCACTCTTTAA+AGG | 0.199252 | 8.4:-24384773 | MS.gene46347:CDS |
| AGATTATCGGAGAGAATTTC+TGG | 0.215757 | 8.4:+24382237 | None:intergenic |
| CTCGTGGTGGGCCGCAATTT+GGG | 0.216697 | 8.4:-24380258 | MS.gene46347:CDS |
| CAAAGGTTATAAAGCAGTTT+TGG | 0.231701 | 8.4:-24383706 | MS.gene46347:CDS |
| CACCCATAACCGGGGCTAAT+GGG | 0.239455 | 8.4:+24380212 | None:intergenic |
| GCTGGGCCTGATACTAATTC+TGG | 0.242393 | 8.4:-24380184 | MS.gene46347:CDS |
| CTCCTTGCCATCTTCCCTTT+TGG | 0.242724 | 8.4:+24380114 | None:intergenic |
| TCGTAATTCTTCTTTATATA+GGG | 0.249245 | 8.4:+24384139 | None:intergenic |
| AAAGGACCATGTGTAATAAT+AGG | 0.249864 | 8.4:-24380451 | MS.gene46347:CDS |
| GGGGCGGATGGGCTTCTCAT+TGG | 0.252278 | 8.4:-24380238 | MS.gene46347:CDS |
| AGATCTTCCCCTGACCAATT+TGG | 0.256707 | 8.4:+24383968 | None:intergenic |
| TCTAGGCCATCATGAACTTT+AGG | 0.261202 | 8.4:+24384992 | None:intergenic |
| TCTGTGCTTCTATATCCTTC+AGG | 0.271435 | 8.4:+24380391 | None:intergenic |
| AGTTGATAATGTCGCGAATA+TGG | 0.280631 | 8.4:-24384059 | MS.gene46347:CDS |
| GGATCGGCCAAAATGCTATC+TGG | 0.282902 | 8.4:-24384751 | MS.gene46347:CDS |
| AATGCATGAATCACCCTTCT+TGG | 0.296951 | 8.4:+24384836 | None:intergenic |
| GGGCGGATGGGCTTCTCATT+GGG | 0.297744 | 8.4:-24380237 | MS.gene46347:CDS |
| TGACATACCTTCTATAGATT+TGG | 0.298524 | 8.4:+24383910 | None:intergenic |
| CCAGCAAAACCACCCATAAC+CGG | 0.304287 | 8.4:+24380202 | None:intergenic |
| CAATGCTTCACGAAGATTAT+CGG | 0.311198 | 8.4:+24382224 | None:intergenic |
| GTCATTTAGTATTTCCAAAT+TGG | 0.319605 | 8.4:-24383982 | MS.gene46347:CDS |
| CCACCCATAACCGGGGCTAA+TGG | 0.324667 | 8.4:+24380211 | None:intergenic |
| TCCTAGGTATAGCCATTTCT+AGG | 0.327354 | 8.4:+24384975 | None:intergenic |
| ATCGTAATTCTTCTTTATAT+AGG | 0.334565 | 8.4:+24384138 | None:intergenic |
| TGACAGCCCAGATAGCATTT+TGG | 0.336632 | 8.4:+24384744 | None:intergenic |
| ATAAAGAAGAATTACGATTA+TGG | 0.345300 | 8.4:-24384133 | MS.gene46347:CDS |
| TCTTCGGCAATTCGGGTATA+CGG | 0.348258 | 8.4:-24383117 | MS.gene46347:CDS |
| ACAGGCAACTCTTTCAAGTT+TGG | 0.351170 | 8.4:-24380424 | MS.gene46347:CDS |
| TGTGGAAACAGTGGCAAAAC+TGG | 0.355690 | 8.4:-24381902 | MS.gene46347:CDS |
| GAACTGTTCTTCGGCAATTC+GGG | 0.357403 | 8.4:-24383124 | MS.gene46347:CDS |
| AACTGATTCTTCGACTTTGT+TGG | 0.359513 | 8.4:-24382076 | MS.gene46347:CDS |
| GGAACTGTTCTTCGGCAATT+CGG | 0.362561 | 8.4:-24383125 | MS.gene46347:CDS |
| AAAGGTTTCCGTGTTTAGTT+TGG | 0.365423 | 8.4:-24384889 | MS.gene46347:CDS |
| GGGCCGCAATTTGGGGCGGA+TGG | 0.367291 | 8.4:-24380250 | MS.gene46347:CDS |
| TGTTGGAGCCACTCTTTAAA+GGG | 0.387550 | 8.4:-24384772 | MS.gene46347:CDS |
| AAAAGAACTCGAACAGATCT+TGG | 0.389573 | 8.4:+24382348 | None:intergenic |
| TTAGTATTTCCAAATTGGTC+AGG | 0.390261 | 8.4:-24383977 | MS.gene46347:CDS |
| GATTATGTTGCAAATGAATC+TGG | 0.397818 | 8.4:-24384372 | MS.gene46347:CDS |
| CTTACGTTCTTGTAATTGTT+CGG | 0.398118 | 8.4:+24382011 | None:intergenic |
| CTGTGCTTCTATATCCTTCA+GGG | 0.408081 | 8.4:+24380392 | None:intergenic |
| ATTCTTCGACTTTGTTGGAT+TGG | 0.409384 | 8.4:-24382071 | MS.gene46347:CDS |
| TTGTATGAGAACAGAAATTC+AGG | 0.413060 | 8.4:-24383078 | MS.gene46347:intron |
| AAAGGGCTGAATAGAGGATT+GGG | 0.415501 | 8.4:-24384429 | MS.gene46347:CDS |
| CTCCTCCATGAGAAGGGAAA+TGG | 0.416760 | 8.4:+24381764 | None:intergenic |
| GAGACAAGCCAAGTCTAGAT+TGG | 0.419344 | 8.4:-24380149 | MS.gene46347:CDS |
| ACCACAGCTTTCAAACTTGA+AGG | 0.422727 | 8.4:-24383938 | MS.gene46347:CDS |
| TTGCCTAAGGTTGGTGGAAG+TGG | 0.424242 | 8.4:-24380301 | MS.gene46347:CDS |
| TCACAGCCACGACTCTTCTT+AGG | 0.430174 | 8.4:-24382177 | MS.gene46347:CDS |
| GAGAACCATTTCCCTTCTCA+TGG | 0.432148 | 8.4:-24381769 | MS.gene46347:CDS |
| AAAGAAGCAAAAGCAGCAAA+AGG | 0.440203 | 8.4:+24381928 | None:intergenic |
| GGCCTAGCCAAATCTATAGA+AGG | 0.440228 | 8.4:-24383917 | MS.gene46347:intron |
| TGCAGGCATTACATGGAAGT+TGG | 0.441399 | 8.4:-24383205 | MS.gene46347:intron |
| GTGATTCATGCATTCAAAGT+TGG | 0.443331 | 8.4:-24384827 | MS.gene46347:CDS |
| TGCTACAGGGCAACAATTGA+TGG | 0.444287 | 8.4:-24380511 | MS.gene46347:CDS |
| TAAAAGTTGGAACTGTTCTT+CGG | 0.454248 | 8.4:-24383133 | MS.gene46347:CDS |
| AGACAAGCCAAGTCTAGATT+GGG | 0.460900 | 8.4:-24380148 | MS.gene46347:CDS |
| TTCTCCAAGACATCAACTCT+TGG | 0.460986 | 8.4:+24381787 | None:intergenic |
| GGCCGCAATTTGGGGCGGAT+GGG | 0.461585 | 8.4:-24380249 | MS.gene46347:CDS |
| AGTTCATGATGGCCTAGAAA+TGG | 0.462800 | 8.4:-24384987 | MS.gene46347:CDS |
| AGGAACTGAAATGCTGCTAC+AGG | 0.463256 | 8.4:-24380525 | MS.gene46347:CDS |
| TGGGATTGTCTTATGCCAAA+AGG | 0.463760 | 8.4:-24380129 | MS.gene46347:CDS |
| CTGCAATGAAAACAGCTTGA+AGG | 0.467393 | 8.4:+24384343 | None:intergenic |
| ATGCATGAATCACCCTTCTT+GGG | 0.470463 | 8.4:+24384837 | None:intergenic |
| TTCTACCCAATAAAATAGAA+AGG | 0.470564 | 8.4:+24380345 | None:intergenic |
| CAAAGGGCTGAATAGAGGAT+TGG | 0.475828 | 8.4:-24384430 | MS.gene46347:CDS |
| TTATGCAAAGGGCTGAATAG+AGG | 0.477408 | 8.4:-24384435 | MS.gene46347:CDS |
| CAGCAAAACCACCCATAACC+GGG | 0.479362 | 8.4:+24380203 | None:intergenic |
| ACCCATAACCGGGGCTAATG+GGG | 0.484522 | 8.4:+24380213 | None:intergenic |
| CCAACACCAGAATTAGTATC+AGG | 0.485918 | 8.4:+24380178 | None:intergenic |
| ACCAACCTTAGGCAAAATGA+TGG | 0.487326 | 8.4:+24380309 | None:intergenic |
| GCAACCATAGCTTCCTCTCA+TGG | 0.496206 | 8.4:-24382123 | MS.gene46347:CDS |
| ATACTAAATGACTCATGAAA+AGG | 0.499140 | 8.4:+24383993 | None:intergenic |
| GGGATTGTCTTATGCCAAAA+GGG | 0.500151 | 8.4:-24380128 | MS.gene46347:CDS |
| GCAGGCATTACATGGAAGTT+GGG | 0.503722 | 8.4:-24383204 | MS.gene46347:intron |
| TACGTTTCTTCCATTTCTCA+AGG | 0.504702 | 8.4:+24384936 | None:intergenic |
| GAAACCAAGAGTTGATGTCT+TGG | 0.506023 | 8.4:-24381791 | MS.gene46347:CDS |
| GGATTGGGGACATTATTAGC+AGG | 0.506171 | 8.4:-24384414 | MS.gene46347:CDS |
| TCGCAACAGTATGTAAAAGT+TGG | 0.507499 | 8.4:-24383146 | MS.gene46347:CDS |
| TTGCGAGCATGTTGTTAGCT+TGG | 0.507829 | 8.4:+24382142 | None:intergenic |
| GCACCACTTCCACCAACCTT+AGG | 0.510448 | 8.4:+24380298 | None:intergenic |
| GTTTAGTTTGGAAGACTACA+TGG | 0.510665 | 8.4:-24384877 | MS.gene46347:CDS |
| CTTTAAAATCACAACATTGG+TGG | 0.511272 | 8.4:+24380470 | None:intergenic |
| TACATGGAAGTTGGGAGCCA+AGG | 0.512610 | 8.4:-24383196 | MS.gene46347:CDS |
| TCGTGGTGGGCCGCAATTTG+GGG | 0.513175 | 8.4:-24380257 | MS.gene46347:CDS |
| TGACAGTACCTAAAATGCCT+TGG | 0.520588 | 8.4:+24383179 | None:intergenic |
| TGAACTGTGCAGGCATTACA+TGG | 0.522777 | 8.4:-24383212 | MS.gene46347:intron |
| ATGACTCATGAAAAGGCAAA+TGG | 0.524147 | 8.4:+24384000 | None:intergenic |
| ATTGATGAAGTTGAAGAACT+TGG | 0.525841 | 8.4:-24381871 | MS.gene46347:CDS |
| GATCGGCCAAAATGCTATCT+GGG | 0.526883 | 8.4:-24384750 | MS.gene46347:CDS |
| TAGTATTTCCAAATTGGTCA+GGG | 0.528241 | 8.4:-24383976 | MS.gene46347:CDS |
| AATGGCACAGCCAATGGCTA+TGG | 0.528827 | 8.4:+24384018 | None:intergenic |
| AGCCCATCCGCCCCAAATTG+CGG | 0.529899 | 8.4:+24380247 | None:intergenic |
| GTCCTTTAAAATCACAACAT+TGG | 0.535638 | 8.4:+24380467 | None:intergenic |
| GTTGTTAGCTTGGATGTCAT+CGG | 0.535845 | 8.4:+24382152 | None:intergenic |
| CGCTTCTATACCATAGCCAT+TGG | 0.538092 | 8.4:-24384028 | MS.gene46347:CDS |
| TCTTATGCCAAAAGGGAAGA+TGG | 0.539221 | 8.4:-24380121 | MS.gene46347:CDS |
| GCCTTCAAGTTTGAAAGCTG+TGG | 0.539858 | 8.4:+24383937 | None:intergenic |
| AAGGCAAATGGCACAGCCAA+TGG | 0.540672 | 8.4:+24384012 | None:intergenic |
| TCTGCTGCTAGTCTTATGCA+AGG | 0.540766 | 8.4:+24382318 | None:intergenic |
| TTTGGTGCATTTAACCCTGA+AGG | 0.542646 | 8.4:-24380406 | MS.gene46347:CDS |
| CTGTTTGATTATGCTCGTGG+TGG | 0.546126 | 8.4:-24380271 | MS.gene46347:CDS |
| CTCACTCTCCTCCATGAGAA+GGG | 0.546738 | 8.4:+24381758 | None:intergenic |
| TGGGACATGATGACCCAAGA+AGG | 0.548075 | 8.4:-24384850 | MS.gene46347:CDS |
| CCTGATACTAATTCTGGTGT+TGG | 0.548121 | 8.4:-24380178 | MS.gene46347:CDS |
| AAAATCTACTGATGAAACAT+TGG | 0.548975 | 8.4:-24383679 | MS.gene46347:intron |
| CAGGGGCAACTTTATGCAAA+GGG | 0.549085 | 8.4:-24384446 | MS.gene46347:CDS |
| AGAAAGTGAGATCAATATCA+TGG | 0.550729 | 8.4:+24380880 | None:intergenic |
| AGTTGAAGAACTTGGTCGGT+TGG | 0.550930 | 8.4:-24381863 | MS.gene46347:CDS |
| ATATCATGGTATTTAATCTG+AGG | 0.552243 | 8.4:+24380894 | None:intergenic |
| GAGCCACTCTTTAAAGGGAT+CGG | 0.554696 | 8.4:-24384767 | MS.gene46347:CDS |
| GATCTGCAGCCACATATATG+AGG | 0.555277 | 8.4:-24384168 | MS.gene46347:CDS |
| GCAGGGGCAACTTTATGCAA+AGG | 0.555764 | 8.4:-24384447 | MS.gene46347:intron |
| CCATTAGCCCCGGTTATGGG+TGG | 0.559046 | 8.4:-24380211 | MS.gene46347:CDS |
| CCCATAACCGGGGCTAATGG+GGG | 0.559548 | 8.4:+24380214 | None:intergenic |
| TGCCAAAAGGGAAGATGGCA+AGG | 0.559565 | 8.4:-24380116 | MS.gene46347:CDS |
| TGGCCGATCCCTTTAAAGAG+TGG | 0.567696 | 8.4:+24384764 | None:intergenic |
| CTTTCCATGAGAGGAAGCTA+TGG | 0.569455 | 8.4:+24382119 | None:intergenic |
| TGTTTGATTATGCTCGTGGT+GGG | 0.570159 | 8.4:-24380270 | MS.gene46347:CDS |
| ACTCACTCTCCTCCATGAGA+AGG | 0.573903 | 8.4:+24381757 | None:intergenic |
| TATACGGTGGTAGCTCTACA+TGG | 0.579076 | 8.4:-24383101 | MS.gene46347:CDS |
| GGGAATGAACCTCATATATG+TGG | 0.581767 | 8.4:+24384159 | None:intergenic |
| ATGATTCCTAAAGTTCATGA+TGG | 0.582610 | 8.4:-24384998 | MS.gene46347:CDS |
| TGGATTCGTGCAGCTTGTGT+CGG | 0.584675 | 8.4:-24383792 | MS.gene46347:intron |
| TTCTTTGCTTGTGGAAACAG+TGG | 0.586553 | 8.4:-24381911 | MS.gene46347:CDS |
| AGACAATCCCAATCTAGACT+TGG | 0.587589 | 8.4:+24380141 | None:intergenic |
| GCCTAGAAATGGCTATACCT+AGG | 0.588780 | 8.4:-24384976 | MS.gene46347:CDS |
| TGGTGGGCCGCAATTTGGGG+CGG | 0.589206 | 8.4:-24380254 | MS.gene46347:CDS |
| CGAACAATTACAAGAACGTA+AGG | 0.591129 | 8.4:-24382010 | MS.gene46347:CDS |
| CTAATAGAAAACTCATCACC+AGG | 0.594652 | 8.4:+24381820 | None:intergenic |
| AGAGAATTTCTGGTGAGCAA+TGG | 0.596330 | 8.4:+24382247 | None:intergenic |
| GATTGGGGACATTATTAGCA+GGG | 0.597708 | 8.4:-24384413 | MS.gene46347:CDS |
| GAGCGAGCTCTTTCCATGAG+AGG | 0.598607 | 8.4:+24382110 | None:intergenic |
| TACCTTCTATAGATTTGGCT+AGG | 0.600939 | 8.4:+24383915 | None:intergenic |
| AGTTTGGAAGACTACATGGA+AGG | 0.606777 | 8.4:-24384873 | MS.gene46347:CDS |
| TGGAAGACTACATGGAAGGT+GGG | 0.611396 | 8.4:-24384869 | MS.gene46347:CDS |
| TTGGAAGACTACATGGAAGG+TGG | 0.614695 | 8.4:-24384870 | MS.gene46347:CDS |
| TGCATCAGCTGAACAGACAA+AGG | 0.615780 | 8.4:-24382037 | MS.gene46347:CDS |
| CTGCTGCTAGTCTTATGCAA+GGG | 0.615929 | 8.4:+24382319 | None:intergenic |
| GCTCTGTTTGATTATGCTCG+TGG | 0.617447 | 8.4:-24380274 | MS.gene46347:CDS |
| ATGAAGTTGAAGAACTTGGT+CGG | 0.621502 | 8.4:-24381867 | MS.gene46347:CDS |
| GGGACATGATGACCCAAGAA+GGG | 0.622433 | 8.4:-24384849 | MS.gene46347:CDS |
| GGAACTGAAATGCTGCTACA+GGG | 0.624888 | 8.4:-24380524 | MS.gene46347:CDS |
| GTGTAACCTATTATTACACA+TGG | 0.636213 | 8.4:+24380445 | None:intergenic |
| AACCATTTCCCTTCTCATGG+AGG | 0.637368 | 8.4:-24381766 | MS.gene46347:CDS |
| TGTGTAATAATAGGTTACAC+AGG | 0.642935 | 8.4:-24380442 | MS.gene46347:CDS |
| TGTGATGATTCAATATACAA+AGG | 0.645562 | 8.4:-24383723 | MS.gene46347:CDS |
| AGTATTTCCAAATTGGTCAG+GGG | 0.650407 | 8.4:-24383975 | MS.gene46347:CDS |
| CCAACCTTAGGCAAAATGAT+GGG | 0.651598 | 8.4:+24380310 | None:intergenic |
| AGCAAAACCACCCATAACCG+GGG | 0.652327 | 8.4:+24380204 | None:intergenic |
| TTGCATAAGACTAGCAGCAG+AGG | 0.655213 | 8.4:-24382316 | MS.gene46347:CDS |
| TCGGAGCCTAAGAAGAGTCG+TGG | 0.656408 | 8.4:+24382171 | None:intergenic |
| TGTTTCAAAGAGTATACACC+TGG | 0.658227 | 8.4:-24381838 | MS.gene46347:CDS |
| GAAGAATTACGATTATGGTG+TGG | 0.658310 | 8.4:-24384128 | MS.gene46347:CDS |
| GTGGTGTTCGAATTCACCGC+AGG | 0.662552 | 8.4:-24384710 | MS.gene46347:intron |
| TCGGCAATTCGGGTATACGG+TGG | 0.663730 | 8.4:-24383114 | MS.gene46347:CDS |
| TATTCGCGACATTATCAACT+CGG | 0.668834 | 8.4:+24384062 | None:intergenic |
| GGCTGTCATGACCGTCGTCG+TGG | 0.670100 | 8.4:-24384729 | MS.gene46347:CDS |
| GAATTCGAACACCACGACGA+CGG | 0.674271 | 8.4:+24384718 | None:intergenic |
| AAGGGCTGAATAGAGGATTG+GGG | 0.679447 | 8.4:-24384428 | MS.gene46347:CDS |
| CAATGGCTATGGTATAGAAG+CGG | 0.684555 | 8.4:+24384029 | None:intergenic |
| GTAGTCTTCCAAACTAAACA+CGG | 0.700142 | 8.4:+24384881 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTTAATTATTAT+TGG | - | chr8.4:24381703-24381722 | MS.gene46347:intron | 0.0% |
| !! | AACAAAAATTAAATAGTTAA+TGG | - | chr8.4:24384430-24384449 | MS.gene46347:CDS | 10.0% |
| !! | TATATACACAATAAAAAAAT+CGG | + | chr8.4:24384286-24384305 | None:intergenic | 10.0% |
| !!! | AATTTTTTGAAATCTTTATT+GGG | + | chr8.4:24382395-24382414 | None:intergenic | 10.0% |
| !!! | TAATTTTTTGAAATCTTTAT+TGG | + | chr8.4:24382396-24382415 | None:intergenic | 10.0% |
| !!! | TATAAAAACATTTTATTGTA+CGG | - | chr8.4:24381214-24381233 | MS.gene46347:intron | 10.0% |
| !! | AAAATTATCAAATTAAAAGG+AGG | + | chr8.4:24382651-24382670 | None:intergenic | 15.0% |
| !! | AATAAAGAAAATCAAATTCT+AGG | - | chr8.4:24383477-24383496 | MS.gene46347:intron | 15.0% |
| !! | AATTCCAAAATTAATTTAGT+CGG | + | chr8.4:24384327-24384346 | None:intergenic | 15.0% |
| !! | AATTTCAAAAGCTAATTTAT+GGG | + | chr8.4:24382127-24382146 | None:intergenic | 15.0% |
| !! | TAAATACAAATCATATTTGA+TGG | + | chr8.4:24383731-24383750 | None:intergenic | 15.0% |
| !! | TTACTTTATGAAAACAAATA+CGG | - | chr8.4:24383933-24383952 | MS.gene46347:CDS | 15.0% |
| !!! | ATCTTAAAATTTGAATTTTG+AGG | + | chr8.4:24382156-24382175 | None:intergenic | 15.0% |
| !!! | ATTTTTTGAAATCTTTATTG+GGG | + | chr8.4:24382394-24382413 | None:intergenic | 15.0% |
| !!! | CTATTTTAAATATGTTATTG+TGG | - | chr8.4:24382187-24382206 | MS.gene46347:CDS | 15.0% |
| !!! | GAGATAAAAATAAGTTATTT+TGG | + | chr8.4:24380825-24380844 | None:intergenic | 15.0% |
| !!! | TCAAAATTCAAATTTTAAGA+TGG | - | chr8.4:24382155-24382174 | MS.gene46347:CDS | 15.0% |
| !!! | TCTATCATAATTTTAAATTG+CGG | + | chr8.4:24380494-24380513 | None:intergenic | 15.0% |
| !!! | TTTAAATTTGAAAAAGTATC+TGG | - | chr8.4:24384373-24384392 | MS.gene46347:CDS | 15.0% |
| !! | ATAAAGAAGAATTACGATTA+TGG | - | chr8.4:24380898-24380917 | MS.gene46347:CDS | 20.0% |
| !! | ATAGATAGATAGATAGTATA+AGG | - | chr8.4:24380532-24380551 | MS.gene46347:intron | 20.0% |
| !! | ATCGTAATTCTTCTTTATAT+AGG | + | chr8.4:24380896-24380915 | None:intergenic | 20.0% |
| !! | ATTATAACACATAGTATCAA+AGG | - | chr8.4:24381181-24381200 | MS.gene46347:intron | 20.0% |
| !! | ATTTCAAAAGCTAATTTATG+GGG | + | chr8.4:24382126-24382145 | None:intergenic | 20.0% |
| !! | CAATAAAAAAATCGGATAAA+CGG | + | chr8.4:24384278-24384297 | None:intergenic | 20.0% |
| !! | GAATTTCAAAAGCTAATTTA+TGG | + | chr8.4:24382128-24382147 | None:intergenic | 20.0% |
| !! | TCGTAATTCTTCTTTATATA+GGG | + | chr8.4:24380895-24380914 | None:intergenic | 20.0% |
| !! | TGAATATGTTACTACTATTT+AGG | - | chr8.4:24384249-24384268 | MS.gene46347:intron | 20.0% |
| !! | TTTATTCCAAACAATATTGT+TGG | + | chr8.4:24383463-24383482 | None:intergenic | 20.0% |
| !!! | ATATTTAAAGTGGTTGAATA+TGG | + | chr8.4:24381689-24381708 | None:intergenic | 20.0% |
| !!! | ATATTTTCTAATAAGGCATT+TGG | + | chr8.4:24383558-24383577 | None:intergenic | 20.0% |
| !!! | GGCATTTTTTGTATTTTTAA+CGG | - | chr8.4:24383640-24383659 | MS.gene46347:intron | 20.0% |
| !!! | GTTAACAAAACATTTTTGAA+AGG | - | chr8.4:24384185-24384204 | MS.gene46347:intron | 20.0% |
| !!! | GTTAGTAATTTGCATATATA+AGG | + | chr8.4:24383518-24383537 | None:intergenic | 20.0% |
| !!! | TAATAACAATTTTACTCATC+TGG | + | chr8.4:24383057-24383076 | None:intergenic | 20.0% |
| !!! | TGTATTTTTCTACAATATCA+AGG | + | chr8.4:24380399-24380418 | None:intergenic | 20.0% |
| !!! | TTCTGATTTTTTTGAAGTAT+CGG | - | chr8.4:24382483-24382502 | MS.gene46347:intron | 20.0% |
| ! | AAAATCTACTGATGAAACAT+TGG | - | chr8.4:24381352-24381371 | MS.gene46347:intron | 25.0% |
| ! | AAAATTGCAAGCTTATACTA+GGG | - | chr8.4:24385000-24385019 | MS.gene46347:CDS | 25.0% |
| ! | AAATCTACACCATAATTAAG+AGG | + | chr8.4:24384350-24384369 | None:intergenic | 25.0% |
| ! | ACAAGTCCATATTGTTTATT+TGG | - | chr8.4:24384080-24384099 | MS.gene46347:CDS | 25.0% |
| ! | AGAATGAGAATTAGTCAATT+AGG | + | chr8.4:24382617-24382636 | None:intergenic | 25.0% |
| ! | ATACTAAATGACTCATGAAA+AGG | + | chr8.4:24381041-24381060 | None:intergenic | 25.0% |
| ! | ATATCATGGTATTTAATCTG+AGG | + | chr8.4:24384140-24384159 | None:intergenic | 25.0% |
| ! | ATGAGTTGTTAATTAGCATA+GGG | - | chr8.4:24381551-24381570 | MS.gene46347:intron | 25.0% |
| ! | GAATGAGAATTAGTCAATTA+GGG | + | chr8.4:24382616-24382635 | None:intergenic | 25.0% |
| ! | GTCATTTAGTATTTCCAAAT+TGG | - | chr8.4:24381049-24381068 | MS.gene46347:intron | 25.0% |
| ! | TAAATTCTCTATCATTCCAA+TGG | - | chr8.4:24384051-24384070 | MS.gene46347:CDS | 25.0% |
| ! | TAACATTATCCTTCATCAAA+TGG | + | chr8.4:24382030-24382049 | None:intergenic | 25.0% |
| ! | TGAATAGTGTTAATTCGTTA+TGG | - | chr8.4:24384002-24384021 | MS.gene46347:CDS | 25.0% |
| ! | TGGATAAAGAGAAAATATGA+GGG | - | chr8.4:24383693-24383712 | MS.gene46347:CDS | 25.0% |
| ! | TGTGATGATTCAATATACAA+AGG | - | chr8.4:24381308-24381327 | MS.gene46347:intron | 25.0% |
| ! | TTCCAACCAAATAAACAATA+TGG | + | chr8.4:24384089-24384108 | None:intergenic | 25.0% |
| ! | TTCTACCCAATAAAATAGAA+AGG | + | chr8.4:24384689-24384708 | None:intergenic | 25.0% |
| ! | TTTATCTCAATTGTTGTGTT+TGG | - | chr8.4:24380837-24380856 | MS.gene46347:intron | 25.0% |
| ! | TTTCAAAACCTTTGATGTTT+CGG | - | chr8.4:24380468-24380487 | MS.gene46347:CDS | 25.0% |
| !! | AATTTAGAATTGCTTGACTT+AGG | + | chr8.4:24381495-24381514 | None:intergenic | 25.0% |
| !! | ACTCGTCATATTTTCTAATA+AGG | + | chr8.4:24383565-24383584 | None:intergenic | 25.0% |
| !! | ATTTAGAATTGCTTGACTTA+GGG | + | chr8.4:24381494-24381513 | None:intergenic | 25.0% |
| !! | CATTAAAAGTTGATCTTCAT+GGG | - | chr8.4:24381432-24381451 | MS.gene46347:intron | 25.0% |
| !! | GTATCCGACTAAATTAATTT+TGG | - | chr8.4:24384320-24384339 | MS.gene46347:intron | 25.0% |
| !! | GTTATATCAGTTCATCATTT+TGG | + | chr8.4:24384474-24384493 | None:intergenic | 25.0% |
| !! | TAGTATAAGCTTGCAATTTT+GGG | + | chr8.4:24385000-24385019 | None:intergenic | 25.0% |
| !! | TGATGCCTTTCTATTTTATT+GGG | - | chr8.4:24384681-24384700 | MS.gene46347:intron | 25.0% |
| !! | TTGATGCCTTTCTATTTTAT+TGG | - | chr8.4:24384680-24384699 | MS.gene46347:intron | 25.0% |
| !! | TTTGGAATTCCTCTTAATTA+TGG | - | chr8.4:24384338-24384357 | MS.gene46347:CDS | 25.0% |
| !!! | AAATTTGAAAAAGTATCTGG+TGG | - | chr8.4:24384376-24384395 | MS.gene46347:CDS | 25.0% |
| !!! | ATCAAATTCTAGGTTTTGAA+TGG | - | chr8.4:24383487-24383506 | MS.gene46347:intron | 25.0% |
| !!! | TAATTTGTGATATCTTTTGC+TGG | - | chr8.4:24380562-24380581 | MS.gene46347:intron | 25.0% |
| AAAGGACCATGTGTAATAAT+AGG | - | chr8.4:24384580-24384599 | MS.gene46347:intron | 30.0% | |
| AAATATCTCCTTGCATAAAG+TGG | - | chr8.4:24382252-24382271 | MS.gene46347:CDS | 30.0% | |
| AATCACAAAACAGACATATG+TGG | - | chr8.4:24381663-24381682 | MS.gene46347:intron | 30.0% | |
| AATCAGAATAAATGCGTGTT+TGG | + | chr8.4:24382471-24382490 | None:intergenic | 30.0% | |
| AATGGAGAAATTGAAGTTTC+TGG | - | chr8.4:24381272-24381291 | MS.gene46347:intron | 30.0% | |
| AATGGTAGCTTCATTATACT+CGG | + | chr8.4:24381416-24381435 | None:intergenic | 30.0% | |
| ACTTTATGCAAGGAGATATT+TGG | + | chr8.4:24382253-24382272 | None:intergenic | 30.0% | |
| AGAAAGTGAGATCAATATCA+TGG | + | chr8.4:24384154-24384173 | None:intergenic | 30.0% | |
| ATCTCCAACAGAGAATATAA+AGG | + | chr8.4:24382053-24382072 | None:intergenic | 30.0% | |
| ATGATTCCTAAAGTTCATGA+TGG | - | chr8.4:24380033-24380052 | MS.gene46347:CDS | 30.0% | |
| ATTGATGAAGTTGAAGAACT+TGG | - | chr8.4:24383160-24383179 | MS.gene46347:CDS | 30.0% | |
| CAAAATAGTGGTTATATCGT+AGG | - | chr8.4:24382087-24382106 | MS.gene46347:CDS | 30.0% | |
| CAAAATTGCAAGCTTATACT+AGG | - | chr8.4:24384999-24385018 | MS.gene46347:CDS | 30.0% | |
| CATGAGTTGTTAATTAGCAT+AGG | - | chr8.4:24381550-24381569 | MS.gene46347:intron | 30.0% | |
| CTGGATAAAGAGAAAATATG+AGG | - | chr8.4:24383692-24383711 | MS.gene46347:CDS | 30.0% | |
| CTTACGTTCTTGTAATTGTT+CGG | + | chr8.4:24383023-24383042 | None:intergenic | 30.0% | |
| GAACTGATATAACTTTGATC+AGG | - | chr8.4:24384481-24384500 | MS.gene46347:intron | 30.0% | |
| GATATAACTTTGATCAGGTA+AGG | - | chr8.4:24384486-24384505 | MS.gene46347:intron | 30.0% | |
| GATTATGTTGCAAATGAATC+TGG | - | chr8.4:24380659-24380678 | MS.gene46347:intron | 30.0% | |
| GTCCATATTGTTTATTTGGT+TGG | - | chr8.4:24384084-24384103 | MS.gene46347:CDS | 30.0% | |
| GTGTAACCTATTATTACACA+TGG | + | chr8.4:24384589-24384608 | None:intergenic | 30.0% | |
| GTTACCTTTATATTCTCTGT+TGG | - | chr8.4:24382046-24382065 | MS.gene46347:CDS | 30.0% | |
| GTTCAAAACAAAACGATTTG+AGG | + | chr8.4:24381804-24381823 | None:intergenic | 30.0% | |
| TAAAAGTTGGAACTGTTCTT+CGG | - | chr8.4:24381898-24381917 | MS.gene46347:CDS | 30.0% | |
| TAGGAACTAATATATACCTG+CGG | + | chr8.4:24380340-24380359 | None:intergenic | 30.0% | |
| TAGTATTTCCAAATTGGTCA+GGG | - | chr8.4:24381055-24381074 | MS.gene46347:intron | 30.0% | |
| TGACATACCTTCTATAGATT+TGG | + | chr8.4:24381124-24381143 | None:intergenic | 30.0% | |
| TGCGATGTTGAAATAACATT+AGG | + | chr8.4:24380743-24380762 | None:intergenic | 30.0% | |
| TGTGTAATAATAGGTTACAC+AGG | - | chr8.4:24384589-24384608 | MS.gene46347:intron | 30.0% | |
| TGTTTATTTGGTTGGAACAT+AGG | - | chr8.4:24384092-24384111 | MS.gene46347:CDS | 30.0% | |
| TTAGTATTTCCAAATTGGTC+AGG | - | chr8.4:24381054-24381073 | MS.gene46347:intron | 30.0% | |
| TTGGGAAGATAACTTCTAAA+GGG | - | chr8.4:24383619-24383638 | MS.gene46347:intron | 30.0% | |
| TTGTATGAGAACAGAAATTC+AGG | - | chr8.4:24381953-24381972 | MS.gene46347:CDS | 30.0% | |
| TTTAGAAGTTATCTTCCCAA+CGG | + | chr8.4:24383619-24383638 | None:intergenic | 30.0% | |
| ! | AAACAAGACCATTTGAGTTT+AGG | + | chr8.4:24380363-24380382 | None:intergenic | 30.0% |
| ! | AAACATTTTATTGTACGGTG+TGG | - | chr8.4:24381219-24381238 | MS.gene46347:intron | 30.0% |
| ! | AAGAAACGTATGCATGTTTT+TGG | - | chr8.4:24380108-24380127 | MS.gene46347:CDS | 30.0% |
| ! | AGTATAAGCTTGCAATTTTG+GGG | + | chr8.4:24384999-24385018 | None:intergenic | 30.0% |
| ! | AGTGATTATTGACTATGGAA+TGG | - | chr8.4:24383900-24383919 | MS.gene46347:intron | 30.0% |
| ! | ATAACTACATGTGTCACTAT+TGG | - | chr8.4:24382425-24382444 | MS.gene46347:intron | 30.0% |
| ! | CAAAGGTTATAAAGCAGTTT+TGG | - | chr8.4:24381325-24381344 | MS.gene46347:intron | 30.0% |
| ! | CACCAATGTTGTGATTTTAA+AGG | - | chr8.4:24384562-24384581 | MS.gene46347:intron | 30.0% |
| ! | CCATGAAGATCAACTTTTAA+TGG | + | chr8.4:24381434-24381453 | None:intergenic | 30.0% |
| ! | CCATTAAAAGTTGATCTTCA+TGG | - | chr8.4:24381431-24381450 | MS.gene46347:intron | 30.0% |
| ! | CTAGTATAAGCTTGCAATTT+TGG | + | chr8.4:24385001-24385020 | None:intergenic | 30.0% |
| ! | GCAGTTGCAGTTTTTATAAT+AGG | - | chr8.4:24380707-24380726 | MS.gene46347:intron | 30.0% |
| ! | GTGATTATTGACTATGGAAT+GGG | - | chr8.4:24383901-24383920 | MS.gene46347:intron | 30.0% |
| ! | TCCAAGTTTTCCATAAAAGT+GGG | - | chr8.4:24383874-24383893 | MS.gene46347:intron | 30.0% |
| !! | CTTTAAAATCACAACATTGG+TGG | + | chr8.4:24384564-24384583 | None:intergenic | 30.0% |
| !! | GATGATGAATTGTGTTTTAG+TGG | - | chr8.4:24383960-24383979 | MS.gene46347:CDS | 30.0% |
| !! | GTCCTTTAAAATCACAACAT+TGG | + | chr8.4:24384567-24384586 | None:intergenic | 30.0% |
| !! | TAAGACATTCTTTGAAGTAC+TGG | + | chr8.4:24381779-24381798 | None:intergenic | 30.0% |
| !! | TGTGTCGGTGAATATTTTAA+TGG | - | chr8.4:24381254-24381273 | MS.gene46347:intron | 30.0% |
| !!! | AATTCTAGGTTTTGAATGGT+TGG | - | chr8.4:24383491-24383510 | MS.gene46347:intron | 30.0% |
| !!! | CACTATTTTGACTAGACAAA+GGG | + | chr8.4:24382077-24382096 | None:intergenic | 30.0% |
| !!! | TATTTTTGGTGATGAGTCTA+GGG | - | chr8.4:24384942-24384961 | MS.gene46347:CDS | 30.0% |
| !!! | TGTATCATTGCTTTTTCTGT+TGG | - | chr8.4:24380242-24380261 | MS.gene46347:CDS | 30.0% |
| AAAAGAACTCGAACAGATCT+TGG | + | chr8.4:24382686-24382705 | None:intergenic | 35.0% | |
| AAAAGCTAATTTATGGGGTG+AGG | + | chr8.4:24382121-24382140 | None:intergenic | 35.0% | |
| AAAGAAGCAAAAGCAGCAAA+AGG | + | chr8.4:24383106-24383125 | None:intergenic | 35.0% | |
| AAAGGTTTCCGTGTTTAGTT+TGG | - | chr8.4:24380142-24380161 | MS.gene46347:CDS | 35.0% | |
| AACCCTTAAGCTCATTCATA+GGG | + | chr8.4:24382526-24382545 | None:intergenic | 35.0% | |
| AAGGAGATATTTGGAGAGTA+AGG | + | chr8.4:24382244-24382263 | None:intergenic | 35.0% | |
| AGATTATCGGAGAGAATTTC+TGG | + | chr8.4:24382797-24382816 | None:intergenic | 35.0% | |
| AGTATTTCCAAATTGGTCAG+GGG | - | chr8.4:24381056-24381075 | MS.gene46347:intron | 35.0% | |
| AGTTCCTACCTAAACTCAAA+TGG | - | chr8.4:24380352-24380371 | MS.gene46347:CDS | 35.0% | |
| ATAGTGGTTATATCGTAGGT+TGG | - | chr8.4:24382091-24382110 | MS.gene46347:CDS | 35.0% | |
| ATCAACACTTTGGATGAAAG+AGG | - | chr8.4:24381605-24381624 | MS.gene46347:intron | 35.0% | |
| ATGAAGTTGAAGAACTTGGT+CGG | - | chr8.4:24383164-24383183 | MS.gene46347:CDS | 35.0% | |
| ATGACTCATGAAAAGGCAAA+TGG | + | chr8.4:24381034-24381053 | None:intergenic | 35.0% | |
| ATTCTCTATCATTCCAATGG+AGG | - | chr8.4:24384054-24384073 | MS.gene46347:CDS | 35.0% | |
| ATTCTTCGACTTTGTTGGAT+TGG | - | chr8.4:24382960-24382979 | MS.gene46347:intron | 35.0% | |
| CAATGCTTCACGAAGATTAT+CGG | + | chr8.4:24382810-24382829 | None:intergenic | 35.0% | |
| CCTTTGTCTAGTCAAAATAG+TGG | - | chr8.4:24382075-24382094 | MS.gene46347:CDS | 35.0% | |
| CGAACAATTACAAGAACGTA+AGG | - | chr8.4:24383021-24383040 | MS.gene46347:intron | 35.0% | |
| CTAATAGAAAACTCATCACC+AGG | + | chr8.4:24383214-24383233 | None:intergenic | 35.0% | |
| GAAGAATTACGATTATGGTG+TGG | - | chr8.4:24380903-24380922 | MS.gene46347:CDS | 35.0% | |
| GCATGTCCAACAATATTGTT+TGG | - | chr8.4:24383454-24383473 | MS.gene46347:intron | 35.0% | |
| GTAGTCTTCCAAACTAAACA+CGG | + | chr8.4:24380153-24380172 | None:intergenic | 35.0% | |
| GTGACAAAAACCTTGAGAAA+TGG | - | chr8.4:24380085-24380104 | MS.gene46347:CDS | 35.0% | |
| GTGATTCATGCATTCAAAGT+TGG | - | chr8.4:24380204-24380223 | MS.gene46347:CDS | 35.0% | |
| GTTGGGAAGATAACTTCTAA+AGG | - | chr8.4:24383618-24383637 | MS.gene46347:intron | 35.0% | |
| TACCTTCTATAGATTTGGCT+AGG | + | chr8.4:24381119-24381138 | None:intergenic | 35.0% | |
| TACGTTTCTTCCATTTCTCA+AGG | + | chr8.4:24380098-24380117 | None:intergenic | 35.0% | |
| TATGTGTAGCATCAACACTT+TGG | - | chr8.4:24381595-24381614 | MS.gene46347:intron | 35.0% | |
| TATTCGCGACATTATCAACT+CGG | + | chr8.4:24380972-24380991 | None:intergenic | 35.0% | |
| TCGCAACAGTATGTAAAAGT+TGG | - | chr8.4:24381885-24381904 | MS.gene46347:CDS | 35.0% | |
| TCTACTGATGAAACATTGGT+AGG | - | chr8.4:24381356-24381375 | MS.gene46347:intron | 35.0% | |
| TCTCAATTGTTGTGTTTGGA+AGG | - | chr8.4:24380841-24380860 | MS.gene46347:intron | 35.0% | |
| ! | AACTGATTCTTCGACTTTGT+TGG | - | chr8.4:24382955-24382974 | MS.gene46347:intron | 35.0% |
| ! | AAGACCATTTGAGTTTAGGT+AGG | + | chr8.4:24380359-24380378 | None:intergenic | 35.0% |
| ! | ACTAACACTAACAAGAGTAC+TGG | - | chr8.4:24382297-24382316 | MS.gene46347:CDS | 35.0% |
| ! | ACTTTTACATACTGTTGCGA+TGG | + | chr8.4:24381885-24381904 | None:intergenic | 35.0% |
| ! | GGTCTAGTGATTATTGACTA+TGG | - | chr8.4:24383895-24383914 | MS.gene46347:intron | 35.0% |
| ! | GTCCAAGTTTTCCATAAAAG+TGG | - | chr8.4:24383873-24383892 | MS.gene46347:intron | 35.0% |
| ! | TGTTTCAAAGAGTATACACC+TGG | - | chr8.4:24383193-24383212 | MS.gene46347:CDS | 35.0% |
| ! | TTTTTGTCACTCTCATTCCT+AGG | + | chr8.4:24380075-24380094 | None:intergenic | 35.0% |
| !! | AATCACTAGACCCACTTTTA+TGG | + | chr8.4:24383887-24383906 | None:intergenic | 35.0% |
| !! | ACCCACTTTTATGGAAAACT+TGG | + | chr8.4:24383878-24383897 | None:intergenic | 35.0% |
| !! | AGTTGATAATGTCGCGAATA+TGG | - | chr8.4:24380972-24380991 | MS.gene46347:intron | 35.0% |
| !! | ATCTGTTCGAGTTCTTTTCA+AGG | - | chr8.4:24382688-24382707 | MS.gene46347:intron | 35.0% |
| !! | GTAAGGTTTAGACTAGTCTT+AGG | + | chr8.4:24382227-24382246 | None:intergenic | 35.0% |
| !! | GTCTGTTTTGTGATTTGTGT+CGG | + | chr8.4:24381658-24381677 | None:intergenic | 35.0% |
| !! | GTTTAGTTTGGAAGACTACA+TGG | - | chr8.4:24380154-24380173 | MS.gene46347:CDS | 35.0% |
| !! | TTTTTGGTGAGAGGCTTAAA+AGG | - | chr8.4:24380124-24380143 | MS.gene46347:CDS | 35.0% |
| !!! | CCACTATTTTGACTAGACAA+AGG | + | chr8.4:24382078-24382097 | None:intergenic | 35.0% |
| !!! | CTATTTTTGGTGATGAGTCT+AGG | - | chr8.4:24384941-24384960 | MS.gene46347:CDS | 35.0% |
| !!! | GATGAATTGTGTTTTAGTGG+TGG | - | chr8.4:24383963-24383982 | MS.gene46347:CDS | 35.0% |
| !!! | TCTCTCAAAGGTTGTTTTTC+TGG | - | chr8.4:24383673-24383692 | MS.gene46347:intron | 35.0% |
| AAAGGGCTGAATAGAGGATT+GGG | - | chr8.4:24380602-24380621 | MS.gene46347:intron | 40.0% | |
| AATGCATGAATCACCCTTCT+TGG | + | chr8.4:24380198-24380217 | None:intergenic | 40.0% | |
| ACCAACCTTAGGCAAAATGA+TGG | + | chr8.4:24384725-24384744 | None:intergenic | 40.0% | |
| ACCACAGCTTTCAAACTTGA+AGG | - | chr8.4:24381093-24381112 | MS.gene46347:intron | 40.0% | |
| AGACAAGCCAAGTCTAGATT+GGG | - | chr8.4:24384883-24384902 | MS.gene46347:CDS | 40.0% | |
| AGACAATCCCAATCTAGACT+TGG | + | chr8.4:24384893-24384912 | None:intergenic | 40.0% | |
| AGCATCTCACCATTTGATGA+AGG | - | chr8.4:24382018-24382037 | MS.gene46347:CDS | 40.0% | |
| AGTTCATGATGGCCTAGAAA+TGG | - | chr8.4:24380044-24380063 | MS.gene46347:CDS | 40.0% | |
| AGTTTGGAAGACTACATGGA+AGG | - | chr8.4:24380158-24380177 | MS.gene46347:CDS | 40.0% | |
| ATGCATGAATCACCCTTCTT+GGG | + | chr8.4:24380197-24380216 | None:intergenic | 40.0% | |
| CAACCCTTAAGCTCATTCAT+AGG | + | chr8.4:24382527-24382546 | None:intergenic | 40.0% | |
| CAATGGCTATGGTATAGAAG+CGG | + | chr8.4:24381005-24381024 | None:intergenic | 40.0% | |
| CACCCTATGAATGAGCTTAA+GGG | - | chr8.4:24382521-24382540 | MS.gene46347:intron | 40.0% | |
| CATACCTGGTGTAGAAAGTT+AGG | + | chr8.4:24381579-24381598 | None:intergenic | 40.0% | |
| CCAACACCAGAATTAGTATC+AGG | + | chr8.4:24384856-24384875 | None:intergenic | 40.0% | |
| CCAACCTTAGGCAAAATGAT+GGG | + | chr8.4:24384724-24384743 | None:intergenic | 40.0% | |
| CCTGATACTAATTCTGGTGT+TGG | - | chr8.4:24384853-24384872 | MS.gene46347:CDS | 40.0% | |
| CTGCAATGAAAACAGCTTGA+AGG | + | chr8.4:24380691-24380710 | None:intergenic | 40.0% | |
| CTGTGCTTCTATATCCTTCA+GGG | + | chr8.4:24384642-24384661 | None:intergenic | 40.0% | |
| GATTGGGGACATTATTAGCA+GGG | - | chr8.4:24380618-24380637 | MS.gene46347:intron | 40.0% | |
| GGGAATGAACCTCATATATG+TGG | + | chr8.4:24380875-24380894 | None:intergenic | 40.0% | |
| GGGATTGTCTTATGCCAAAA+GGG | - | chr8.4:24384903-24384922 | MS.gene46347:CDS | 40.0% | |
| TCACCCTATGAATGAGCTTA+AGG | - | chr8.4:24382520-24382539 | MS.gene46347:intron | 40.0% | |
| TCCTAGGTATAGCCATTTCT+AGG | + | chr8.4:24380059-24380078 | None:intergenic | 40.0% | |
| TCTAGGCCATCATGAACTTT+AGG | + | chr8.4:24380042-24380061 | None:intergenic | 40.0% | |
| TCTGTGCTTCTATATCCTTC+AGG | + | chr8.4:24384643-24384662 | None:intergenic | 40.0% | |
| TCTTATGCCAAAAGGGAAGA+TGG | - | chr8.4:24384910-24384929 | MS.gene46347:CDS | 40.0% | |
| TGACAGTACCTAAAATGCCT+TGG | + | chr8.4:24381855-24381874 | None:intergenic | 40.0% | |
| TGGGATTGTCTTATGCCAAA+AGG | - | chr8.4:24384902-24384921 | MS.gene46347:CDS | 40.0% | |
| TGTTAGTGTTAGTGCTTCCT+AGG | + | chr8.4:24382290-24382309 | None:intergenic | 40.0% | |
| TGTTGGAGCCACTCTTTAAA+GGG | - | chr8.4:24380259-24380278 | MS.gene46347:CDS | 40.0% | |
| TGTTTGATTATGCTCGTGGT+GGG | - | chr8.4:24384761-24384780 | MS.gene46347:CDS | 40.0% | |
| TTATGCAAAGGGCTGAATAG+AGG | - | chr8.4:24380596-24380615 | MS.gene46347:intron | 40.0% | |
| TTCTCCAAGACATCAACTCT+TGG | + | chr8.4:24383247-24383266 | None:intergenic | 40.0% | |
| TTCTTTGCTTGTGGAAACAG+TGG | - | chr8.4:24383120-24383139 | MS.gene46347:CDS | 40.0% | |
| TTGCGGTTGCTTATTGTTGA+AGG | - | chr8.4:24380445-24380464 | MS.gene46347:CDS | 40.0% | |
| ! | AGTGGTGGAAATGCATTACA+AGG | - | chr8.4:24383978-24383997 | MS.gene46347:CDS | 40.0% |
| ! | ATCATTTTGCCTAAGGTTGG+TGG | - | chr8.4:24384724-24384743 | MS.gene46347:CDS | 40.0% |
| ! | GATGGCAAGGAGTCTATTTT+TGG | - | chr8.4:24384928-24384947 | MS.gene46347:CDS | 40.0% |
| ! | GTGATTTTATGGCAGTGTTG+AGG | + | chr8.4:24382838-24382857 | None:intergenic | 40.0% |
| ! | GTTGTTAGCTTGGATGTCAT+CGG | + | chr8.4:24382882-24382901 | None:intergenic | 40.0% |
| ! | TGAACCCATCATTTTGCCTA+AGG | - | chr8.4:24384717-24384736 | MS.gene46347:CDS | 40.0% |
| ! | TGCTTTTGCTTCTTTGCTTG+TGG | - | chr8.4:24383111-24383130 | MS.gene46347:CDS | 40.0% |
| ! | TGTGATATCTTTTGCTGGCA+GGG | - | chr8.4:24380567-24380586 | MS.gene46347:intron | 40.0% |
| ! | TTGTGATATCTTTTGCTGGC+AGG | - | chr8.4:24380566-24380585 | MS.gene46347:intron | 40.0% |
| ! | TTTGGTGCATTTAACCCTGA+AGG | - | chr8.4:24384625-24384644 | MS.gene46347:intron | 40.0% |
| !! | ACAGGCAACTCTTTCAAGTT+TGG | - | chr8.4:24384607-24384626 | MS.gene46347:intron | 40.0% |
| !! | AGAGAATTTCTGGTGAGCAA+TGG | + | chr8.4:24382787-24382806 | None:intergenic | 40.0% |
| !! | ATGACGAGTGTTGCTCTTTT+GGG | - | chr8.4:24383576-24383595 | MS.gene46347:intron | 40.0% |
| !! | ATGGACTTGTTTTCCTCCAT+TGG | + | chr8.4:24384070-24384089 | None:intergenic | 40.0% |
| !! | GAAACCAAGAGTTGATGTCT+TGG | - | chr8.4:24383240-24383259 | MS.gene46347:intron | 40.0% |
| !! | TATGACGAGTGTTGCTCTTT+TGG | - | chr8.4:24383575-24383594 | MS.gene46347:intron | 40.0% |
| !! | TTTGAAGTACTGGTGCTTTG+AGG | + | chr8.4:24381769-24381788 | None:intergenic | 40.0% |
| !!! | CGTTTTGTTTTGAACTGTGC+AGG | - | chr8.4:24381809-24381828 | MS.gene46347:CDS | 40.0% |
| !!! | GTATGCATGTTTTTGGTGAG+AGG | - | chr8.4:24380115-24380134 | MS.gene46347:CDS | 40.0% |
| AACCATTTCCCTTCTCATGG+AGG | - | chr8.4:24383265-24383284 | MS.gene46347:intron | 45.0% | |
| AAGGGCTGAATAGAGGATTG+GGG | - | chr8.4:24380603-24380622 | MS.gene46347:intron | 45.0% | |
| AATTGCGGCCGAAACATCAA+AGG | + | chr8.4:24380479-24380498 | None:intergenic | 45.0% | |
| AGATCTTCCCCTGACCAATT+TGG | + | chr8.4:24381066-24381085 | None:intergenic | 45.0% | |
| AGGAACTGAAATGCTGCTAC+AGG | - | chr8.4:24384506-24384525 | MS.gene46347:intron | 45.0% | |
| AGTGAGTCTGATAAGGAGCA+AGG | - | chr8.4:24383290-24383309 | MS.gene46347:intron | 45.0% | |
| AGTTGAAGAACTTGGTCGGT+TGG | - | chr8.4:24383168-24383187 | MS.gene46347:CDS | 45.0% | |
| CAAAGGGCTGAATAGAGGAT+TGG | - | chr8.4:24380601-24380620 | MS.gene46347:intron | 45.0% | |
| CAGGGGCAACTTTATGCAAA+GGG | - | chr8.4:24380585-24380604 | MS.gene46347:intron | 45.0% | |
| CCAAAAATGCGCAAACCGTT+GGG | - | chr8.4:24383601-24383620 | MS.gene46347:intron | 45.0% | |
| CGCTTCTATACCATAGCCAT+TGG | - | chr8.4:24381003-24381022 | MS.gene46347:intron | 45.0% | |
| CTGTTGGAGCCACTCTTTAA+AGG | - | chr8.4:24380258-24380277 | MS.gene46347:CDS | 45.0% | |
| CTGTTTGATTATGCTCGTGG+TGG | - | chr8.4:24384760-24384779 | MS.gene46347:CDS | 45.0% | |
| CTTTCCATGAGAGGAAGCTA+TGG | + | chr8.4:24382915-24382934 | None:intergenic | 45.0% | |
| GAACTGTTCTTCGGCAATTC+GGG | - | chr8.4:24381907-24381926 | MS.gene46347:CDS | 45.0% | |
| GAGAACCATTTCCCTTCTCA+TGG | - | chr8.4:24383262-24383281 | MS.gene46347:intron | 45.0% | |
| GAGACAAGCCAAGTCTAGAT+TGG | - | chr8.4:24384882-24384901 | MS.gene46347:CDS | 45.0% | |
| GATCGGCCAAAATGCTATCT+GGG | - | chr8.4:24380281-24380300 | MS.gene46347:CDS | 45.0% | |
| GATCTGCAGCCACATATATG+AGG | - | chr8.4:24380863-24380882 | MS.gene46347:CDS | 45.0% | |
| GCAGGCATTACATGGAAGTT+GGG | - | chr8.4:24381827-24381846 | MS.gene46347:CDS | 45.0% | |
| GCCTAGAAATGGCTATACCT+AGG | - | chr8.4:24380055-24380074 | MS.gene46347:CDS | 45.0% | |
| GCTCTGTTTGATTATGCTCG+TGG | - | chr8.4:24384757-24384776 | MS.gene46347:CDS | 45.0% | |
| GCTTGACTTAGGGCACATAT+TGG | + | chr8.4:24381484-24381503 | None:intergenic | 45.0% | |
| GGAACTGAAATGCTGCTACA+GGG | - | chr8.4:24384507-24384526 | MS.gene46347:intron | 45.0% | |
| GGAACTGTTCTTCGGCAATT+CGG | - | chr8.4:24381906-24381925 | MS.gene46347:CDS | 45.0% | |
| GGATTGGGGACATTATTAGC+AGG | - | chr8.4:24380617-24380636 | MS.gene46347:intron | 45.0% | |
| GGCCTAGCCAAATCTATAGA+AGG | - | chr8.4:24381114-24381133 | MS.gene46347:intron | 45.0% | |
| GGTTGTCTCCACTTTATGCA+AGG | + | chr8.4:24382263-24382282 | None:intergenic | 45.0% | |
| TCCAAAAATGCGCAAACCGT+TGG | - | chr8.4:24383600-24383619 | MS.gene46347:intron | 45.0% | |
| TCTTCGGCAATTCGGGTATA+CGG | - | chr8.4:24381914-24381933 | MS.gene46347:CDS | 45.0% | |
| TGAACTGTGCAGGCATTACA+TGG | - | chr8.4:24381819-24381838 | MS.gene46347:CDS | 45.0% | |
| TGCAGGCATTACATGGAAGT+TGG | - | chr8.4:24381826-24381845 | MS.gene46347:CDS | 45.0% | |
| TGCATCAGCTGAACAGACAA+AGG | - | chr8.4:24382994-24383013 | MS.gene46347:intron | 45.0% | |
| TGCTACAGGGCAACAATTGA+TGG | - | chr8.4:24384520-24384539 | MS.gene46347:intron | 45.0% | |
| TGGAAGACTACATGGAAGGT+GGG | - | chr8.4:24380162-24380181 | MS.gene46347:CDS | 45.0% | |
| TGTGGAAACAGTGGCAAAAC+TGG | - | chr8.4:24383129-24383148 | MS.gene46347:CDS | 45.0% | |
| TGTTAGTGCTTCCTAGGTGA+AGG | + | chr8.4:24382284-24382303 | None:intergenic | 45.0% | |
| TTGCATAAGACTAGCAGCAG+AGG | - | chr8.4:24382715-24382734 | MS.gene46347:intron | 45.0% | |
| TTGCGAGCATGTTGTTAGCT+TGG | + | chr8.4:24382892-24382911 | None:intergenic | 45.0% | |
| TTGGAAGACTACATGGAAGG+TGG | - | chr8.4:24380161-24380180 | MS.gene46347:CDS | 45.0% | |
| ! | CCCATCATTTTGCCTAAGGT+TGG | - | chr8.4:24384721-24384740 | MS.gene46347:CDS | 45.0% |
| ! | GAGCCACTCTTTAAAGGGAT+CGG | - | chr8.4:24380264-24380283 | MS.gene46347:CDS | 45.0% |
| ! | GAGTCGTGGCTGTGATTTTA+TGG | + | chr8.4:24382849-24382868 | None:intergenic | 45.0% |
| ! | GCCTTCAAGTTTGAAAGCTG+TGG | + | chr8.4:24381097-24381116 | None:intergenic | 45.0% |
| ! | GGCTTCGAGTTATCTCTCAA+AGG | - | chr8.4:24383661-24383680 | MS.gene46347:intron | 45.0% |
| ! | GTGATATCTTTTGCTGGCAG+GGG | - | chr8.4:24380568-24380587 | MS.gene46347:intron | 45.0% |
| ! | GTGTTGATGCTACACATACC+TGG | + | chr8.4:24381593-24381612 | None:intergenic | 45.0% |
| ! | TATACGGTGGTAGCTCTACA+TGG | - | chr8.4:24381930-24381949 | MS.gene46347:CDS | 45.0% |
| ! | TGACAGCCCAGATAGCATTT+TGG | + | chr8.4:24380290-24380309 | None:intergenic | 45.0% |
| !! | CTGCTGCTAGTCTTATGCAA+GGG | + | chr8.4:24382715-24382734 | None:intergenic | 45.0% |
| !! | CTTTATTGGGGTCGACTTGT+CGG | + | chr8.4:24382382-24382401 | None:intergenic | 45.0% |
| !! | CTTTGGATGAAAGAGGTGTC+TGG | - | chr8.4:24381612-24381631 | MS.gene46347:intron | 45.0% |
| !! | TCTGCTGCTAGTCTTATGCA+AGG | + | chr8.4:24382716-24382735 | None:intergenic | 45.0% |
| !! | AATAATAATAATAATAAATG+TGG | - | chr8.4:24383851-24383870 | MS.gene46347:intron | 5.0% |
| !! | ATAAAAATTATCAAATTAAA+AGG | + | chr8.4:24382654-24382673 | None:intergenic | 5.0% |
| !! | TAATTAAAAAATATTTAAAG+TGG | + | chr8.4:24381699-24381718 | None:intergenic | 5.0% |
| !!! | ATAATTTTATTTTTTTTAAG+AGG | + | chr8.4:24381166-24381185 | None:intergenic | 5.0% |
| AAGGCAAATGGCACAGCCAA+TGG | + | chr8.4:24381022-24381041 | None:intergenic | 50.0% | |
| AATGGCACAGCCAATGGCTA+TGG | + | chr8.4:24381016-24381035 | None:intergenic | 50.0% | |
| ACTCACTCTCCTCCATGAGA+AGG | + | chr8.4:24383277-24383296 | None:intergenic | 50.0% | |
| ACTGGACACAACCTTCACCT+AGG | - | chr8.4:24382315-24382334 | MS.gene46347:CDS | 50.0% | |
| AGCAAAACCACCCATAACCG+GGG | + | chr8.4:24384830-24384849 | None:intergenic | 50.0% | |
| AGTGGAGACAACCTTCACCT+AGG | - | chr8.4:24382270-24382289 | MS.gene46347:CDS | 50.0% | |
| CAGCAAAACCACCCATAACC+GGG | + | chr8.4:24384831-24384850 | None:intergenic | 50.0% | |
| CCAGCAAAACCACCCATAAC+CGG | + | chr8.4:24384832-24384851 | None:intergenic | 50.0% | |
| CTCACTCTCCTCCATGAGAA+GGG | + | chr8.4:24383276-24383295 | None:intergenic | 50.0% | |
| CTCCTCCATGAGAAGGGAAA+TGG | + | chr8.4:24383270-24383289 | None:intergenic | 50.0% | |
| GAATTCGAACACCACGACGA+CGG | + | chr8.4:24380316-24380335 | None:intergenic | 50.0% | |
| GACTGATGCAGCTGCAATTG+CGG | - | chr8.4:24380428-24380447 | MS.gene46347:CDS | 50.0% | |
| GCAACCATAGCTTCCTCTCA+TGG | - | chr8.4:24382908-24382927 | MS.gene46347:intron | 50.0% | |
| GCAGGGGCAACTTTATGCAA+AGG | - | chr8.4:24380584-24380603 | MS.gene46347:intron | 50.0% | |
| GCTGGGCCTGATACTAATTC+TGG | - | chr8.4:24384847-24384866 | MS.gene46347:CDS | 50.0% | |
| GGAGGAGAGTGAGTCTGATA+AGG | - | chr8.4:24383283-24383302 | MS.gene46347:intron | 50.0% | |
| GGATCGGCCAAAATGCTATC+TGG | - | chr8.4:24380280-24380299 | MS.gene46347:CDS | 50.0% | |
| GGCACCTAACTTTCTACACC+AGG | - | chr8.4:24381572-24381591 | MS.gene46347:intron | 50.0% | |
| GGGACATGATGACCCAAGAA+GGG | - | chr8.4:24380182-24380201 | MS.gene46347:CDS | 50.0% | |
| TACATGGAAGTTGGGAGCCA+AGG | - | chr8.4:24381835-24381854 | MS.gene46347:CDS | 50.0% | |
| TCACAGCCACGACTCTTCTT+AGG | - | chr8.4:24382854-24382873 | MS.gene46347:intron | 50.0% | |
| TGCCAAAAGGGAAGATGGCA+AGG | - | chr8.4:24384915-24384934 | MS.gene46347:CDS | 50.0% | |
| TGGATTCGTGCAGCTTGTGT+CGG | - | chr8.4:24381239-24381258 | MS.gene46347:intron | 50.0% | |
| TGGGACATGATGACCCAAGA+AGG | - | chr8.4:24380181-24380200 | MS.gene46347:CDS | 50.0% | |
| TGTCGGACACAGACACGTAT+CGG | + | chr8.4:24381641-24381660 | None:intergenic | 50.0% | |
| ! | CCCAACGGTTTGCGCATTTT+TGG | + | chr8.4:24383604-24383623 | None:intergenic | 50.0% |
| ! | CTCCTTGCCATCTTCCCTTT+TGG | + | chr8.4:24384920-24384939 | None:intergenic | 50.0% |
| ! | TGGCCGATCCCTTTAAAGAG+TGG | + | chr8.4:24380270-24380289 | None:intergenic | 50.0% |
| !! | CGGTTATGGGTGGTTTTGCT+GGG | - | chr8.4:24384830-24384849 | MS.gene46347:CDS | 50.0% |
| !! | GTACTGGTGCTTTGAGGAAC+TGG | + | chr8.4:24381763-24381782 | None:intergenic | 50.0% |
| !! | GTTGGGAGCCAAGGCATTTT+AGG | - | chr8.4:24381844-24381863 | MS.gene46347:CDS | 50.0% |
| !! | GTTTGGTGTCTGAGACGTGT+TGG | + | chr8.4:24382454-24382473 | None:intergenic | 50.0% |
| !! | TTGCCTAAGGTTGGTGGAAG+TGG | - | chr8.4:24384730-24384749 | MS.gene46347:CDS | 50.0% |
| ACCCATAACCGGGGCTAATG+GGG | + | chr8.4:24384821-24384840 | None:intergenic | 55.0% | |
| CACCCATAACCGGGGCTAAT+GGG | + | chr8.4:24384822-24384841 | None:intergenic | 55.0% | |
| GAGCGAGCTCTTTCCATGAG+AGG | + | chr8.4:24382924-24382943 | None:intergenic | 55.0% | |
| GCACCACTTCCACCAACCTT+AGG | + | chr8.4:24384736-24384755 | None:intergenic | 55.0% | |
| GTGGTGTTCGAATTCACCGC+AGG | - | chr8.4:24380321-24380340 | MS.gene46347:CDS | 55.0% | |
| TCGGAGCCTAAGAAGAGTCG+TGG | + | chr8.4:24382863-24382882 | None:intergenic | 55.0% | |
| TCGGCAATTCGGGTATACGG+TGG | - | chr8.4:24381917-24381936 | MS.gene46347:CDS | 55.0% | |
| !! | CCGGTTATGGGTGGTTTTGC+TGG | - | chr8.4:24384829-24384848 | MS.gene46347:CDS | 55.0% |
| AGCCCATCCGCCCCAAATTG+CGG | + | chr8.4:24384787-24384806 | None:intergenic | 60.0% | |
| CCACCCATAACCGGGGCTAA+TGG | + | chr8.4:24384823-24384842 | None:intergenic | 60.0% | |
| CCATTAGCCCCGGTTATGGG+TGG | - | chr8.4:24384820-24384839 | MS.gene46347:CDS | 60.0% | |
| CCCATAACCGGGGCTAATGG+GGG | + | chr8.4:24384820-24384839 | None:intergenic | 60.0% | |
| CCCCCATTAGCCCCGGTTAT+GGG | - | chr8.4:24384817-24384836 | MS.gene46347:CDS | 60.0% | |
| ! | GGGCGGATGGGCTTCTCATT+GGG | - | chr8.4:24384794-24384813 | MS.gene46347:CDS | 60.0% |
| !! | CTCGTGGTGGGCCGCAATTT+GGG | - | chr8.4:24384773-24384792 | MS.gene46347:CDS | 60.0% |
| !! | GGGTCGACTTGTCGGTGTCA+AGG | + | chr8.4:24382374-24382393 | None:intergenic | 60.0% |
| !! | TCGTGGTGGGCCGCAATTTG+GGG | - | chr8.4:24384774-24384793 | MS.gene46347:CDS | 60.0% |
| CATTGGGCCCCCATTAGCCC+CGG | - | chr8.4:24384810-24384829 | MS.gene46347:CDS | 65.0% | |
| GCCCCCATTAGCCCCGGTTA+TGG | - | chr8.4:24384816-24384835 | MS.gene46347:CDS | 65.0% | |
| GGCTGTCATGACCGTCGTCG+TGG | - | chr8.4:24380302-24380321 | MS.gene46347:CDS | 65.0% | |
| ! | GGCCGCAATTTGGGGCGGAT+GGG | - | chr8.4:24384782-24384801 | MS.gene46347:CDS | 65.0% |
| ! | GGGGCGGATGGGCTTCTCAT+TGG | - | chr8.4:24384793-24384812 | MS.gene46347:CDS | 65.0% |
| ! | TGGTGGGCCGCAATTTGGGG+CGG | - | chr8.4:24384777-24384796 | MS.gene46347:CDS | 65.0% |
| !! | GCTCGTGGTGGGCCGCAATT+TGG | - | chr8.4:24384772-24384791 | MS.gene46347:CDS | 65.0% |
| ! | GGGCCGCAATTTGGGGCGGA+TGG | - | chr8.4:24384781-24384800 | MS.gene46347:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 24380033 | 24385020 | 24380033 | ID=MS.gene46347 |
| chr8.4 | mRNA | 24380033 | 24385020 | 24380033 | ID=MS.gene46347.t1;Parent=MS.gene46347 |
| chr8.4 | exon | 24384711 | 24385020 | 24384711 | ID=MS.gene46347.t1.exon1;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24384711 | 24385020 | 24384711 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| chr8.4 | exon | 24384325 | 24384465 | 24384325 | ID=MS.gene46347.t1.exon2;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24384325 | 24384465 | 24384325 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| chr8.4 | exon | 24383918 | 24384190 | 24383918 | ID=MS.gene46347.t1.exon3;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24383918 | 24384190 | 24383918 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| chr8.4 | exon | 24383680 | 24383801 | 24383680 | ID=MS.gene46347.t1.exon4;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24383680 | 24383801 | 24383680 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| chr8.4 | exon | 24383079 | 24383222 | 24383079 | ID=MS.gene46347.t1.exon5;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24383079 | 24383222 | 24383079 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| chr8.4 | exon | 24381763 | 24382373 | 24381763 | ID=MS.gene46347.t1.exon6;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24381763 | 24382373 | 24381763 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| chr8.4 | exon | 24380847 | 24380935 | 24380847 | ID=MS.gene46347.t1.exon7;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24380847 | 24380935 | 24380847 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| chr8.4 | exon | 24380033 | 24380550 | 24380033 | ID=MS.gene46347.t1.exon8;Parent=MS.gene46347.t1 |
| chr8.4 | CDS | 24380033 | 24380550 | 24380033 | ID=cds.MS.gene46347.t1;Parent=MS.gene46347.t1 |
| Gene Sequence |
| Protein sequence |
