Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015314.t1 | XP_003611471.1 | 94 | 537 | 16 | 1 | 1 | 537 | 29 | 549 | 1.40E-283 | 984.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015314.t1 | O49696 | 60.8 | 548 | 150 | 11 | 14 | 522 | 28 | 549 | 4.1e-170 | 599.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015314.t1 | G7JZX5 | 94.0 | 537 | 16 | 1 | 1 | 537 | 29 | 549 | 1.0e-283 | 984.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene058006 | MS.gene015314 | PPI |
| MS.gene015314 | MS.gene21471 | PPI |
| MS.gene015314 | MS.gene46346 | PPI |
| MS.gene60398 | MS.gene015314 | PPI |
| MS.gene059674 | MS.gene015314 | PPI |
| MS.gene60396 | MS.gene015314 | PPI |
| MS.gene46347 | MS.gene015314 | PPI |
| MS.gene011649 | MS.gene015314 | PPI |
| MS.gene019141 | MS.gene015314 | PPI |
| MS.gene015314 | MS.gene60396 | PPI |
| MS.gene058007 | MS.gene015314 | PPI |
| MS.gene011647 | MS.gene015314 | PPI |
| MS.gene015314 | MS.gene09658 | PPI |
| MS.gene60397 | MS.gene015314 | PPI |
| MS.gene011648 | MS.gene015314 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015314.t1 | MTR_5g014310 | 96.089 | 537 | 5 | 1 | 1 | 537 | 29 | 549 | 0.0 | 1054 |
| MS.gene015314.t1 | MTR_4g098570 | 75.651 | 538 | 100 | 6 | 4 | 537 | 24 | 534 | 0.0 | 780 |
| MS.gene015314.t1 | MTR_4g098610 | 72.575 | 536 | 116 | 5 | 4 | 535 | 24 | 532 | 0.0 | 720 |
| MS.gene015314.t1 | MTR_1g115140 | 58.022 | 536 | 202 | 5 | 7 | 537 | 19 | 536 | 0.0 | 615 |
| MS.gene015314.t1 | MTR_1g115175 | 59.032 | 537 | 195 | 7 | 7 | 537 | 15 | 532 | 0.0 | 602 |
| MS.gene015314.t1 | MTR_1g115190 | 57.169 | 537 | 204 | 6 | 7 | 535 | 16 | 534 | 0.0 | 585 |
| MS.gene015314.t1 | MTR_4g051575 | 41.713 | 362 | 183 | 5 | 14 | 367 | 19 | 360 | 2.53e-88 | 280 |
| MS.gene015314.t1 | MTR_1g077660 | 39.178 | 365 | 198 | 4 | 25 | 388 | 42 | 383 | 6.08e-88 | 279 |
| MS.gene015314.t1 | MTR_1g077670 | 39.394 | 363 | 197 | 4 | 25 | 386 | 48 | 388 | 2.59e-87 | 278 |
| MS.gene015314.t1 | MTR_2g087288 | 41.088 | 331 | 172 | 5 | 30 | 358 | 38 | 347 | 5.77e-84 | 268 |
| MS.gene015314.t1 | MTR_7g106260 | 39.722 | 360 | 190 | 5 | 30 | 386 | 43 | 378 | 1.78e-81 | 262 |
| MS.gene015314.t1 | MTR_8g104110 | 32.830 | 530 | 296 | 13 | 15 | 508 | 50 | 555 | 2.45e-78 | 257 |
| MS.gene015314.t1 | MTR_6g084680 | 32.000 | 550 | 297 | 16 | 12 | 518 | 71 | 586 | 4.14e-77 | 254 |
| MS.gene015314.t1 | MTR_8g104130 | 32.171 | 516 | 281 | 10 | 30 | 508 | 60 | 543 | 4.34e-74 | 246 |
| MS.gene015314.t1 | MTR_1g111250 | 33.267 | 505 | 279 | 14 | 28 | 508 | 73 | 543 | 5.84e-73 | 242 |
| MS.gene015314.t1 | MTR_7g094770 | 35.693 | 339 | 183 | 6 | 34 | 364 | 61 | 372 | 2.29e-71 | 235 |
| MS.gene015314.t1 | MTR_2g087285 | 36.389 | 360 | 208 | 5 | 30 | 388 | 38 | 377 | 2.99e-70 | 232 |
| MS.gene015314.t1 | MTR_8g104120 | 30.669 | 538 | 299 | 13 | 15 | 508 | 46 | 553 | 3.76e-67 | 227 |
| MS.gene015314.t1 | MTR_0710s0020 | 58.919 | 185 | 59 | 2 | 7 | 191 | 16 | 183 | 1.60e-60 | 198 |
| MS.gene015314.t1 | MTR_4g051575 | 42.534 | 221 | 123 | 2 | 148 | 367 | 9 | 226 | 3.74e-55 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015314.t1 | AT4G17970 | 60.766 | 548 | 150 | 11 | 14 | 522 | 28 | 549 | 0.0 | 639 |
| MS.gene015314.t1 | AT5G46610 | 59.619 | 525 | 159 | 7 | 25 | 522 | 37 | 535 | 0.0 | 594 |
| MS.gene015314.t1 | AT5G46600 | 57.367 | 509 | 173 | 8 | 25 | 509 | 38 | 526 | 0.0 | 557 |
| MS.gene015314.t1 | AT5G46610 | 55.810 | 525 | 155 | 7 | 25 | 522 | 37 | 511 | 0.0 | 544 |
| MS.gene015314.t1 | AT5G46610 | 58.765 | 405 | 131 | 5 | 145 | 522 | 93 | 488 | 1.71e-156 | 456 |
| MS.gene015314.t1 | AT4G00910 | 37.158 | 366 | 210 | 4 | 25 | 388 | 54 | 401 | 3.34e-87 | 278 |
| MS.gene015314.t1 | AT1G08440 | 41.742 | 333 | 173 | 4 | 30 | 360 | 14 | 327 | 1.69e-84 | 271 |
| MS.gene015314.t1 | AT3G18440 | 32.752 | 516 | 294 | 11 | 25 | 508 | 75 | 569 | 1.70e-78 | 258 |
| MS.gene015314.t1 | AT1G08430 | 38.567 | 363 | 198 | 6 | 30 | 386 | 14 | 357 | 1.80e-76 | 250 |
| MS.gene015314.t1 | AT3G11680 | 37.173 | 382 | 216 | 4 | 7 | 386 | 14 | 373 | 8.42e-76 | 248 |
| MS.gene015314.t1 | AT3G11680 | 37.173 | 382 | 216 | 4 | 7 | 386 | 16 | 375 | 8.59e-76 | 248 |
| MS.gene015314.t1 | AT1G18420 | 31.569 | 529 | 285 | 12 | 26 | 508 | 80 | 577 | 5.12e-73 | 243 |
| MS.gene015314.t1 | AT2G27240 | 38.462 | 364 | 197 | 7 | 30 | 391 | 14 | 352 | 9.19e-72 | 237 |
| MS.gene015314.t1 | AT1G18420 | 31.429 | 525 | 283 | 12 | 30 | 508 | 1 | 494 | 1.70e-71 | 237 |
| MS.gene015314.t1 | AT2G27240 | 36.082 | 388 | 199 | 6 | 30 | 391 | 14 | 378 | 1.25e-68 | 229 |
| MS.gene015314.t1 | AT2G17470 | 31.028 | 506 | 294 | 15 | 30 | 508 | 32 | 509 | 4.24e-66 | 224 |
| MS.gene015314.t1 | AT2G17470 | 31.028 | 506 | 294 | 15 | 30 | 508 | 54 | 531 | 8.25e-66 | 223 |
| MS.gene015314.t1 | AT1G68600 | 30.874 | 515 | 290 | 15 | 28 | 508 | 47 | 529 | 2.56e-62 | 214 |
| MS.gene015314.t1 | AT1G25480 | 30.682 | 528 | 292 | 16 | 23 | 508 | 46 | 541 | 6.60e-61 | 210 |
| MS.gene015314.t1 | AT4G17585 | 63.380 | 71 | 21 | 2 | 14 | 83 | 28 | 94 | 7.07e-20 | 87.0 |
Find 111 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGCTTCTTTGTTGTATT+TGG | 0.117643 | 5.4:-8166622 | MS.gene015314:CDS |
| ATTCTTATAACCTTTGTATA+TGG | 0.174550 | 5.4:+8164795 | None:intergenic |
| GAGACGAGGTTGAGACTTTA+TGG | 0.233252 | 5.4:+8164090 | None:intergenic |
| GACACTGTTAGCTGGATTAT+TGG | 0.245806 | 5.4:-8165906 | MS.gene015314:CDS |
| TCTCAACCTCGTCTCTTCTT+AGG | 0.247691 | 5.4:-8164082 | MS.gene015314:CDS |
| TCATAGTTCTTCTTTATATA+AGG | 0.253399 | 5.4:+8165410 | None:intergenic |
| TGTGGAAACAGTTGCAAAAT+TGG | 0.260709 | 5.4:-8163789 | MS.gene015314:CDS |
| ACTCTTCTGCATTGCTTGAT+TGG | 0.276649 | 5.4:-8163946 | MS.gene015314:CDS |
| CAAAGGTTATAAGAATGTTT+TGG | 0.284044 | 5.4:-8164788 | MS.gene015314:CDS |
| AGGTCTTCTCCTGACCAATT+TGG | 0.289100 | 5.4:+8165239 | None:intergenic |
| AGATGATCGGAGAGTATTTC+GGG | 0.298853 | 5.4:+8164142 | None:intergenic |
| GCATATTGATGTTTCCAAAT+TGG | 0.300248 | 5.4:-8165253 | MS.gene015314:CDS |
| AGATTGGACAGAGTGCAATT+TGG | 0.311610 | 5.4:-8166581 | MS.gene015314:CDS |
| TTGCATACCCTCTATAGATT+TGG | 0.312634 | 5.4:+8165181 | None:intergenic |
| ACATCAATATGCTCATTATA+AGG | 0.334201 | 5.4:+8165264 | None:intergenic |
| AGCTTCTTTGTTGTATTTGG+TGG | 0.345036 | 5.4:-8166619 | MS.gene015314:CDS |
| TGCATGGTTGTGTTTGTGTT+TGG | 0.345549 | 5.4:+8164057 | None:intergenic |
| GTTGGGAGCCAAGGCATTCT+AGG | 0.347134 | 5.4:-8164635 | MS.gene015314:CDS |
| AAGATGATCGGAGAGTATTT+CGG | 0.350796 | 5.4:+8164141 | None:intergenic |
| CTGTTTGAGATCAGAAATTC+AGG | 0.351569 | 5.4:-8164526 | MS.gene015314:intron |
| CCAGGCGTTGCATGCAAGTT+GGG | 0.364061 | 5.4:-8164652 | MS.gene015314:intron |
| TTCTTATAACCTTTGTATAT+GGG | 0.365139 | 5.4:+8164796 | None:intergenic |
| CAACCACGGTGTAGCCGAAT+TGG | 0.384589 | 5.4:+8164559 | None:intergenic |
| GGATTATTGGCATTCATTGT+TGG | 0.386550 | 5.4:-8165893 | MS.gene015314:CDS |
| TCTACTGCTTTCAAGCTTGA+AGG | 0.394471 | 5.4:-8165209 | MS.gene015314:CDS |
| ATTGAGGAAGTTGAAGAACT+TGG | 0.400564 | 5.4:-8163758 | MS.gene015314:CDS |
| AAAGGGCTTAACAGAGGATT+GGG | 0.400724 | 5.4:-8165929 | MS.gene015314:CDS |
| ATAAAGAAGAACTATGACTA+TGG | 0.401454 | 5.4:-8165404 | MS.gene015314:CDS |
| GATTGGACAGAGTGCAATTT+GGG | 0.401481 | 5.4:-8166580 | MS.gene015314:CDS |
| GAGCCACTTTACCATGAGAT+TGG | 0.434876 | 5.4:-8166597 | MS.gene015314:CDS |
| GAGCTTTAGCTACTTATATG+AGG | 0.435607 | 5.4:-8165439 | MS.gene015314:CDS |
| AATGCATGGATCACCCTTCT+CGG | 0.437349 | 5.4:+8166666 | None:intergenic |
| GCGACAGTTTCTTATGCTGT+TGG | 0.449688 | 5.4:+8164174 | None:intergenic |
| ACTAACCAGTGTTTCATCAA+TGG | 0.450544 | 5.4:+8164756 | None:intergenic |
| TTGATGTTTCCAAATTGGTC+AGG | 0.452448 | 5.4:-8165248 | MS.gene015314:CDS |
| CGGAACAATTTGCCTTCTCA+TGG | 0.454690 | 5.4:-8163656 | MS.gene015314:CDS |
| AAAATTGGATCTTGTTATTG+AGG | 0.463462 | 5.4:-8163774 | MS.gene015314:CDS |
| TCATCTTCATGAAGCTCTAC+AGG | 0.467841 | 5.4:-8164125 | MS.gene015314:CDS |
| CAAAGGGCTTAACAGAGGAT+TGG | 0.468379 | 5.4:-8165930 | MS.gene015314:CDS |
| GGAGCTGTTCTTCGCCAATT+CGG | 0.468447 | 5.4:-8164573 | MS.gene015314:CDS |
| AACATGGCTCTAACTGATCT+TGG | 0.468885 | 5.4:+8164253 | None:intergenic |
| TTGGAAGTATACTTTCCAAC+AGG | 0.469451 | 5.4:-8166261 | MS.gene015314:intron |
| AAGGCAAATGGCACATCCTA+TGG | 0.471313 | 5.4:+8165283 | None:intergenic |
| TATGCTCATTATAAGGCAAA+TGG | 0.472401 | 5.4:+8165271 | None:intergenic |
| TTGAGGAAGTTGAAGAACTT+GGG | 0.474676 | 5.4:-8163757 | MS.gene015314:CDS |
| ATCTCTCAAGCTGTTATCAT+TGG | 0.475130 | 5.4:-8165842 | MS.gene015314:CDS |
| TCAGATGATTTGATATCTCC+AGG | 0.475473 | 5.4:+8164823 | None:intergenic |
| GTGATCCATGCATTCAAAGT+TGG | 0.477949 | 5.4:-8166657 | MS.gene015314:CDS |
| AAAGATGCAAAAGCAGCAAA+AGG | 0.479326 | 5.4:+8163815 | None:intergenic |
| TGCTTTAAAGAGTTTAGAGC+TGG | 0.480144 | 5.4:-8163725 | MS.gene015314:CDS |
| TACACCGTGGTTGCTCTACA+TGG | 0.480998 | 5.4:-8164549 | MS.gene015314:CDS |
| TGTTCAAGGATCCATGCATA+AGG | 0.481436 | 5.4:-8164234 | MS.gene015314:CDS |
| GGAGAGTTCCTAGCTTGGCT+TGG | 0.484559 | 5.4:-8166719 | MS.gene015314:CDS |
| ATCAGTTAGAGCCATGTTCA+AGG | 0.486726 | 5.4:-8164248 | MS.gene015314:CDS |
| GGTAGACATGGAAAAGGCTC+TGG | 0.488167 | 5.4:-8163995 | MS.gene015314:CDS |
| GTTGTGCTTGAGTTCACTGC+TGG | 0.488607 | 5.4:-8166540 | MS.gene015314:CDS |
| GCCAGGCGTTGCATGCAAGT+TGG | 0.489802 | 5.4:-8164653 | MS.gene015314:intron |
| CAGGGGCAACTTTATGCAAA+GGG | 0.490713 | 5.4:-8165946 | MS.gene015314:CDS |
| TGCATGCAAGTTGGGAGCCA+AGG | 0.493195 | 5.4:-8164644 | MS.gene015314:CDS |
| AGGTCTTGCCAAATCTATAG+AGG | 0.499136 | 5.4:-8165189 | MS.gene015314:CDS |
| GGATTGGGGACACTGTTAGC+TGG | 0.502209 | 5.4:-8165914 | MS.gene015314:CDS |
| GTTTGAGCATGTTGTTTGCA+TGG | 0.505188 | 5.4:+8164041 | None:intergenic |
| GCTTGGCTTGGAAGACTACA+TGG | 0.510395 | 5.4:-8166707 | MS.gene015314:CDS |
| TGGCAGCAATATGTAAAAGT+TGG | 0.518460 | 5.4:-8164594 | MS.gene015314:CDS |
| GTCTATTCAATTCCATGAGA+AGG | 0.518933 | 5.4:+8163644 | None:intergenic |
| ATGCATAAGGGTTGCAGCAG+AGG | 0.527389 | 5.4:-8164221 | MS.gene015314:CDS |
| TGGAAGACTACATGGAATGT+TGG | 0.532227 | 5.4:-8166699 | MS.gene015314:CDS |
| TATGGAGAAATTGATAGCCC+TGG | 0.532775 | 5.4:-8164841 | MS.gene015314:CDS |
| ACAAACCAACTTTGAATGCA+TGG | 0.533262 | 5.4:+8166652 | None:intergenic |
| TGAAAGCAGTAGAATTATGT+AGG | 0.536646 | 5.4:+8165219 | None:intergenic |
| GCTAAGGAGAGTTCCTAGCT+TGG | 0.543789 | 5.4:-8166724 | MS.gene015314:CDS |
| GTTCAAGGATCCATGCATAA+GGG | 0.544118 | 5.4:-8164233 | MS.gene015314:CDS |
| AAACTAGCTGCTGCACAAGT+TGG | 0.544612 | 5.4:-8164022 | MS.gene015314:CDS |
| AAAATCCATTGATGAAACAC+TGG | 0.544964 | 5.4:-8164761 | MS.gene015314:intron |
| TGTCCAATCTCATGGTAAAG+TGG | 0.545106 | 5.4:+8166594 | None:intergenic |
| TGACAGTACCTAGAATGCCT+TGG | 0.545491 | 5.4:+8164627 | None:intergenic |
| GTAGTCTTCCAAGCCAAGCT+AGG | 0.551573 | 5.4:+8166711 | None:intergenic |
| GGCACATCCTATGGCAATGG+AGG | 0.551636 | 5.4:+8165292 | None:intergenic |
| CAAGTTGGTCAAGGTAGACA+TGG | 0.553561 | 5.4:-8164007 | MS.gene015314:CDS |
| GCAGGGGCAACTTTATGCAA+AGG | 0.555764 | 5.4:-8165947 | MS.gene015314:intron |
| GGTCAAGGTAGACATGGAAA+AGG | 0.558508 | 5.4:-8164001 | MS.gene015314:CDS |
| TTGGGCTGTCATGACTGTTG+TGG | 0.564819 | 5.4:-8166562 | MS.gene015314:CDS |
| TTGCACTCTGTCCAATCTCA+TGG | 0.565734 | 5.4:+8166586 | None:intergenic |
| CGCATATCCTCCATTGCCAT+AGG | 0.573769 | 5.4:-8165299 | MS.gene015314:CDS |
| TTGCAAATGCATCATCTCAT+CGG | 0.574979 | 5.4:-8165865 | MS.gene015314:CDS |
| AATGGCACATCCTATGGCAA+TGG | 0.578492 | 5.4:+8165289 | None:intergenic |
| TAGAGCTTCATGAAGATGAT+CGG | 0.579444 | 5.4:+8164129 | None:intergenic |
| TCTGCTGCAACCCTTATGCA+TGG | 0.600193 | 5.4:+8164223 | None:intergenic |
| TTGGATATGAAGATCCGAGA+AGG | 0.603501 | 5.4:-8166680 | MS.gene015314:CDS |
| TGCAGTCGAAGGAAAACGAA+AGG | 0.603800 | 5.4:-8163901 | MS.gene015314:CDS |
| AGATTCATTAATGCAGTCGA+AGG | 0.607766 | 5.4:-8163912 | MS.gene015314:CDS |
| TTATGCAAAGGGCTTAACAG+AGG | 0.619114 | 5.4:-8165935 | MS.gene015314:CDS |
| AGAGTATTTCGGGAGAGCAA+TGG | 0.619871 | 5.4:+8164152 | None:intergenic |
| GCTGCTGCACAAGTTGGTCA+AGG | 0.626016 | 5.4:-8164016 | MS.gene015314:CDS |
| GGTACTGTCACAAATTTCCA+TGG | 0.628747 | 5.4:-8164614 | MS.gene015314:CDS |
| TCTTCAACACACTGTCCACA+CGG | 0.631610 | 5.4:+8165333 | None:intergenic |
| GGTCTTGCCAAATCTATAGA+GGG | 0.633364 | 5.4:-8165188 | MS.gene015314:intron |
| TGGATATGAAGATCCGAGAA+GGG | 0.636881 | 5.4:-8166679 | MS.gene015314:CDS |
| CAGATGATTTGATATCTCCA+GGG | 0.645408 | 5.4:+8164824 | None:intergenic |
| TGGAGATATCAAATCATCTG+AGG | 0.646682 | 5.4:-8164821 | MS.gene015314:CDS |
| TCTGAGGATCCCATATACAA+AGG | 0.659738 | 5.4:-8164805 | MS.gene015314:CDS |
| TATGCATGGATCCTTGAACA+TGG | 0.660343 | 5.4:+8164237 | None:intergenic |
| CACTAGTCTTGAATTCTCTG+AGG | 0.665482 | 5.4:-8163843 | MS.gene015314:CDS |
| TGCTTTGTCAAGTTACCGTG+TGG | 0.668331 | 5.4:-8165348 | MS.gene015314:CDS |
| TTCCGCGACACATCAACTCG+AGG | 0.668844 | 5.4:+8163674 | None:intergenic |
| AACCTCGAGTTGATGTGTCG+CGG | 0.672079 | 5.4:-8163676 | MS.gene015314:CDS |
| ACAGCCATGTAGAGCAACCA+CGG | 0.689758 | 5.4:+8164545 | None:intergenic |
| TCGCCAATTCGGCTACACCG+TGG | 0.698242 | 5.4:-8164562 | MS.gene015314:CDS |
| TTGGAACCTAAGAAGAGACG+AGG | 0.710005 | 5.4:+8164076 | None:intergenic |
| AAGGGCTTAACAGAGGATTG+GGG | 0.729918 | 5.4:-8165928 | MS.gene015314:CDS |
| TGATATTGTTGTGACTTGTG+AGG | 0.758451 | 5.4:-8163699 | MS.gene015314:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAAATTTAGTAAGA+GGG | - | chr5.4:8164063-8164082 | MS.gene015314:CDS | 10.0% |
| !! | TAATATAAAAATTTAGTAAG+AGG | - | chr5.4:8164062-8164081 | MS.gene015314:CDS | 10.0% |
| !! | ACATAAAGAAAATTTAATTG+AGG | + | chr5.4:8163917-8163936 | None:intergenic | 15.0% |
| !! | CTGTTAAATATATTTAGTAA+CGG | - | chr5.4:8165261-8165280 | MS.gene015314:CDS | 15.0% |
| !! | TAATGAATATATGTTATAAC+AGG | + | chr5.4:8166115-8166134 | None:intergenic | 15.0% |
| !! | AATTAAAATTAACCTAGAGA+TGG | + | chr5.4:8165693-8165712 | None:intergenic | 20.0% |
| !! | ATTCTTATAACCTTTGTATA+TGG | + | chr5.4:8165622-8165641 | None:intergenic | 20.0% |
| !! | TAGACTATGATATCATATTA+AGG | + | chr5.4:8164241-8164260 | None:intergenic | 20.0% |
| !! | TCATAGTTCTTCTTTATATA+AGG | + | chr5.4:8165007-8165026 | None:intergenic | 20.0% |
| !! | TTCTTATAACCTTTGTATAT+GGG | + | chr5.4:8165621-8165640 | None:intergenic | 20.0% |
| !! | TTTCTTTATGTAAAAGCTAT+TGG | - | chr5.4:8163926-8163945 | MS.gene015314:CDS | 20.0% |
| !!! | AATCCAAGTTTTACATTTAA+AGG | - | chr5.4:8163957-8163976 | MS.gene015314:CDS | 20.0% |
| !!! | ACTAGGACATTTTTTTTTTA+AGG | + | chr5.4:8164392-8164411 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTTAAGGAAGGA+AGG | + | chr5.4:8164384-8164403 | None:intergenic | 20.0% |
| !!! | TGTGTCAATGAATATTTTTA+TGG | - | chr5.4:8165555-8165574 | MS.gene015314:intron | 20.0% |
| !!! | TTTCAAACTTTGTGTTTTTT+TGG | - | chr5.4:8164442-8164461 | MS.gene015314:intron | 20.0% |
| ! | AATGTTAACAAATAGTCACA+AGG | - | chr5.4:8164863-8164882 | MS.gene015314:CDS | 25.0% |
| ! | AATTCTGTTACATTAATCAC+TGG | + | chr5.4:8164781-8164800 | None:intergenic | 25.0% |
| ! | ACATCAATATGCTCATTATA+AGG | + | chr5.4:8165153-8165172 | None:intergenic | 25.0% |
| ! | ATAAAGAAGAACTATGACTA+TGG | - | chr5.4:8165010-8165029 | MS.gene015314:intron | 25.0% |
| ! | ATATCATAGTCTATTCATTC+GGG | - | chr5.4:8164248-8164267 | MS.gene015314:CDS | 25.0% |
| ! | CATGTGGAAAAAAGAAAATA+TGG | + | chr5.4:8165448-8165467 | None:intergenic | 25.0% |
| ! | GATATCATAGTCTATTCATT+CGG | - | chr5.4:8164247-8164266 | MS.gene015314:CDS | 25.0% |
| ! | TATACTTCTTAAACGACTTT+GGG | + | chr5.4:8164104-8164123 | None:intergenic | 25.0% |
| ! | TCTCCTTTAAATGTAAAACT+TGG | + | chr5.4:8163963-8163982 | None:intergenic | 25.0% |
| ! | TGTCTTGATTTAGATTTACA+AGG | + | chr5.4:8165511-8165530 | None:intergenic | 25.0% |
| ! | TTTACAAGGTAAAATTCACA+AGG | + | chr5.4:8165497-8165516 | None:intergenic | 25.0% |
| !! | CAAAGGTTATAAGAATGTTT+TGG | - | chr5.4:8165626-8165645 | MS.gene015314:intron | 25.0% |
| !! | TTTAGCTTCTTTGTTGTATT+TGG | - | chr5.4:8163792-8163811 | MS.gene015314:CDS | 25.0% |
| !!! | AAAATTGGATCTTGTTATTG+AGG | - | chr5.4:8166640-8166659 | MS.gene015314:CDS | 25.0% |
| !!! | ATTTGTTTTCTTTTGAACCA+GGG | - | chr5.4:8166087-8166106 | MS.gene015314:intron | 25.0% |
| !!! | GGACATTTTTTTTTTAAGGA+AGG | + | chr5.4:8164388-8164407 | None:intergenic | 25.0% |
| !!! | TATTTGTTTTCTTTTGAACC+AGG | - | chr5.4:8166086-8166105 | MS.gene015314:intron | 25.0% |
| AAAATCCATTGATGAAACAC+TGG | - | chr5.4:8165653-8165672 | MS.gene015314:intron | 30.0% | |
| AACTTATAACGTTACGTAAG+AGG | + | chr5.4:8164018-8164037 | None:intergenic | 30.0% | |
| AAGTATACTTGTATACCTGT+TGG | + | chr5.4:8164171-8164190 | None:intergenic | 30.0% | |
| ACAGGTATACAAGTATACTT+TGG | - | chr5.4:8164171-8164190 | MS.gene015314:CDS | 30.0% | |
| ATACTTCTTAAACGACTTTG+GGG | + | chr5.4:8164103-8164122 | None:intergenic | 30.0% | |
| GCATATTGATGTTTCCAAAT+TGG | - | chr5.4:8165161-8165180 | MS.gene015314:intron | 30.0% | |
| GTATACTTCTTAAACGACTT+TGG | + | chr5.4:8164105-8164124 | None:intergenic | 30.0% | |
| TATATGAGATCTCGATCATA+TGG | - | chr5.4:8164649-8164668 | MS.gene015314:CDS | 30.0% | |
| TATGCTCATTATAAGGCAAA+TGG | + | chr5.4:8165146-8165165 | None:intergenic | 30.0% | |
| TCTAAATCAAGACATAGTCA+AGG | - | chr5.4:8165517-8165536 | MS.gene015314:intron | 30.0% | |
| TCTTACGTAACGTTATAAGT+TGG | - | chr5.4:8164017-8164036 | MS.gene015314:CDS | 30.0% | |
| TGAAAAGAGTTTATACAGAG+AGG | - | chr5.4:8163990-8164009 | MS.gene015314:CDS | 30.0% | |
| TGAAAGCAGTAGAATTATGT+AGG | + | chr5.4:8165198-8165217 | None:intergenic | 30.0% | |
| TTAATACATTCCTTCGAATG+AGG | - | chr5.4:8165711-8165730 | MS.gene015314:intron | 30.0% | |
| TTAATCCCTTAAATTGTGAC+CGG | - | chr5.4:8165942-8165961 | MS.gene015314:CDS | 30.0% | |
| TTAATGTGTGGATAAATTGG+CGG | + | chr5.4:8164278-8164297 | None:intergenic | 30.0% | |
| TTGAACACAAGATTTGATCT+CGG | + | chr5.4:8166029-8166048 | None:intergenic | 30.0% | |
| ! | ATAGCAATTTTACTCAACTG+AGG | + | chr5.4:8166551-8166570 | None:intergenic | 30.0% |
| ! | TCATAATATGCGATTTTCTG+CGG | - | chr5.4:8164938-8164957 | MS.gene015314:intron | 30.0% |
| !! | AAACACAGTTTTATGCTGTT+TGG | - | chr5.4:8164134-8164153 | MS.gene015314:CDS | 30.0% |
| !! | ATGATAATTTGCTTTGCATG+TGG | + | chr5.4:8165464-8165483 | None:intergenic | 30.0% |
| !!! | CGTTATAAGTTGGTTTTGTA+AGG | - | chr5.4:8164027-8164046 | MS.gene015314:CDS | 30.0% |
| !!! | TTTTTTTTAAGGAAGGAAGG+AGG | + | chr5.4:8164381-8164400 | None:intergenic | 30.0% |
| AAAGATGCAAAAGCAGCAAA+AGG | + | chr5.4:8166602-8166621 | None:intergenic | 35.0% | |
| AAGTTCAAACACATGCAACT+AGG | + | chr5.4:8164409-8164428 | None:intergenic | 35.0% | |
| ACAAACCAACTTTGAATGCA+TGG | + | chr5.4:8163765-8163784 | None:intergenic | 35.0% | |
| ACAGTCTTAAACTTACAAGC+CGG | + | chr5.4:8165964-8165983 | None:intergenic | 35.0% | |
| ACTAACCAGTGTTTCATCAA+TGG | + | chr5.4:8165661-8165680 | None:intergenic | 35.0% | |
| AGATTCATTAATGCAGTCGA+AGG | - | chr5.4:8166502-8166521 | MS.gene015314:intron | 35.0% | |
| ATATGTTATAACAGGAACCC+TGG | + | chr5.4:8166107-8166126 | None:intergenic | 35.0% | |
| ATCTCTCAAGCTGTTATCAT+TGG | - | chr5.4:8164572-8164591 | MS.gene015314:CDS | 35.0% | |
| ATGAGGATCTTATATCGCTT+CGG | - | chr5.4:8165728-8165747 | MS.gene015314:intron | 35.0% | |
| ATGATCGAGATCTCATATAG+CGG | + | chr5.4:8164648-8164667 | None:intergenic | 35.0% | |
| ATGGTTTGAACAAGTCGAAT+TGG | - | chr5.4:8164702-8164721 | MS.gene015314:intron | 35.0% | |
| ATTGAGGAAGTTGAAGAACT+TGG | - | chr5.4:8166656-8166675 | MS.gene015314:CDS | 35.0% | |
| CAGATGATTTGATATCTCCA+GGG | + | chr5.4:8165593-8165612 | None:intergenic | 35.0% | |
| GACATGAACACACACTTATT+CGG | + | chr5.4:8164346-8164365 | None:intergenic | 35.0% | |
| GATATAAGATCCTCATTCGA+AGG | + | chr5.4:8165724-8165743 | None:intergenic | 35.0% | |
| GGATTATTGGCATTCATTGT+TGG | - | chr5.4:8164521-8164540 | MS.gene015314:intron | 35.0% | |
| GGCTTAATGTGTGGATAAAT+TGG | + | chr5.4:8164281-8164300 | None:intergenic | 35.0% | |
| GGTTTGAATACCTCGTATTT+CGG | - | chr5.4:8164670-8164689 | MS.gene015314:intron | 35.0% | |
| TAATAGTGCTTAGCGTAAGT+GGG | - | chr5.4:8164301-8164320 | MS.gene015314:intron | 35.0% | |
| TAATGTGTGGATAAATTGGC+GGG | + | chr5.4:8164277-8164296 | None:intergenic | 35.0% | |
| TACTTCTTAAACGACTTTGG+GGG | + | chr5.4:8164102-8164121 | None:intergenic | 35.0% | |
| TAGAGCTTCATGAAGATGAT+CGG | + | chr5.4:8166288-8166307 | None:intergenic | 35.0% | |
| TCAGATGATTTGATATCTCC+AGG | + | chr5.4:8165594-8165613 | None:intergenic | 35.0% | |
| TGGAGATATCAAATCATCTG+AGG | - | chr5.4:8165593-8165612 | MS.gene015314:intron | 35.0% | |
| TGGCAGCAATATGTAAAAGT+TGG | - | chr5.4:8165820-8165839 | MS.gene015314:intron | 35.0% | |
| TGTGGAAACAGTTGCAAAAT+TGG | - | chr5.4:8166625-8166644 | MS.gene015314:CDS | 35.0% | |
| TTGAGGAAGTTGAAGAACTT+GGG | - | chr5.4:8166657-8166676 | MS.gene015314:CDS | 35.0% | |
| TTGATGTTTCCAAATTGGTC+AGG | - | chr5.4:8165166-8165185 | MS.gene015314:intron | 35.0% | |
| TTGCAAATGCATCATCTCAT+CGG | - | chr5.4:8164549-8164568 | MS.gene015314:CDS | 35.0% | |
| TTGCATACCCTCTATAGATT+TGG | + | chr5.4:8165236-8165255 | None:intergenic | 35.0% | |
| ! | AACAAACGTGTGCATGTTTT+TGG | - | chr5.4:8163661-8163680 | MS.gene015314:CDS | 35.0% |
| ! | ACTTTTACATATTGCTGCCA+TGG | + | chr5.4:8165820-8165839 | None:intergenic | 35.0% |
| ! | AGCTTCTTTGTTGTATTTGG+TGG | - | chr5.4:8163795-8163814 | MS.gene015314:CDS | 35.0% |
| ! | ATATCGCTTCGGTATTGAAT+TGG | - | chr5.4:8165739-8165758 | MS.gene015314:intron | 35.0% |
| ! | CTGTTTGAGATCAGAAATTC+AGG | - | chr5.4:8165888-8165907 | MS.gene015314:CDS | 35.0% |
| ! | GAGCTTTAGCTACTTATATG+AGG | - | chr5.4:8164975-8164994 | MS.gene015314:intron | 35.0% |
| ! | TGATATTGTTGTGACTTGTG+AGG | - | chr5.4:8166715-8166734 | MS.gene015314:CDS | 35.0% |
| ! | TTGGAAGTATACTTTCCAAC+AGG | - | chr5.4:8164153-8164172 | MS.gene015314:CDS | 35.0% |
| !! | AAGATGATCGGAGAGTATTT+CGG | + | chr5.4:8166276-8166295 | None:intergenic | 35.0% |
| !! | GTCAGTTTTAACACTCGATA+AGG | + | chr5.4:8166450-8166469 | None:intergenic | 35.0% |
| !! | TGCTTTAAAGAGTTTAGAGC+TGG | - | chr5.4:8166689-8166708 | MS.gene015314:CDS | 35.0% |
| !!! | TTTGTGTTTTTTTGGCTGCA+GGG | - | chr5.4:8164450-8164469 | MS.gene015314:intron | 35.0% |
| AAAGGGCTTAACAGAGGATT+GGG | - | chr5.4:8164485-8164504 | MS.gene015314:intron | 40.0% | |
| ACAAGCCGGTCACAATTTAA+GGG | + | chr5.4:8165950-8165969 | None:intergenic | 40.0% | |
| ACTCTTCTGCATTGCTTGAT+TGG | - | chr5.4:8166468-8166487 | MS.gene015314:intron | 40.0% | |
| AGATTGGACAGAGTGCAATT+TGG | - | chr5.4:8163833-8163852 | MS.gene015314:CDS | 40.0% | |
| AGGTCTTGCCAAATCTATAG+AGG | - | chr5.4:8165225-8165244 | MS.gene015314:CDS | 40.0% | |
| ATCAGTTAGAGCCATGTTCA+AGG | - | chr5.4:8166166-8166185 | MS.gene015314:intron | 40.0% | |
| ATCTTGTGTTCAAACACAGC+CGG | - | chr5.4:8166036-8166055 | MS.gene015314:intron | 40.0% | |
| CAAGATTTGATCTCGGAGTT+CGG | + | chr5.4:8166022-8166041 | None:intergenic | 40.0% | |
| CACTTACGCTAAGCACTATT+AGG | + | chr5.4:8164302-8164321 | None:intergenic | 40.0% | |
| CGTATTTCGGCTTCATCAAA+TGG | - | chr5.4:8164683-8164702 | MS.gene015314:intron | 40.0% | |
| CTAATAGTGCTTAGCGTAAG+TGG | - | chr5.4:8164300-8164319 | MS.gene015314:intron | 40.0% | |
| GACACTGTTAGCTGGATTAT+TGG | - | chr5.4:8164508-8164527 | MS.gene015314:intron | 40.0% | |
| GATTGGACAGAGTGCAATTT+GGG | - | chr5.4:8163834-8163853 | MS.gene015314:CDS | 40.0% | |
| GCACTATTAGGCTTAATGTG+TGG | + | chr5.4:8164290-8164309 | None:intergenic | 40.0% | |
| GGTACTGTCACAAATTTCCA+TGG | - | chr5.4:8165800-8165819 | MS.gene015314:intron | 40.0% | |
| GGTCTTGCCAAATCTATAGA+GGG | - | chr5.4:8165226-8165245 | MS.gene015314:CDS | 40.0% | |
| GTGATCCATGCATTCAAAGT+TGG | - | chr5.4:8163757-8163776 | MS.gene015314:CDS | 40.0% | |
| GTTCAAGGATCCATGCATAA+GGG | - | chr5.4:8166181-8166200 | MS.gene015314:intron | 40.0% | |
| TACAAGCCGGTCACAATTTA+AGG | + | chr5.4:8165951-8165970 | None:intergenic | 40.0% | |
| TATGCATGGATCCTTGAACA+TGG | + | chr5.4:8166180-8166199 | None:intergenic | 40.0% | |
| TCATCTTCATGAAGCTCTAC+AGG | - | chr5.4:8166289-8166308 | MS.gene015314:intron | 40.0% | |
| TCTACTGCTTTCAAGCTTGA+AGG | - | chr5.4:8165205-8165224 | MS.gene015314:CDS | 40.0% | |
| TCTGAGGATCCCATATACAA+AGG | - | chr5.4:8165609-8165628 | MS.gene015314:intron | 40.0% | |
| TGATCGAGATCTCATATAGC+GGG | + | chr5.4:8164647-8164666 | None:intergenic | 40.0% | |
| TGCATGGTTGTGTTTGTGTT+TGG | + | chr5.4:8166360-8166379 | None:intergenic | 40.0% | |
| TGGAAGACTACATGGAATGT+TGG | - | chr5.4:8163715-8163734 | MS.gene015314:CDS | 40.0% | |
| TGGATATGAAGATCCGAGAA+GGG | - | chr5.4:8163735-8163754 | MS.gene015314:CDS | 40.0% | |
| TGTCCAATCTCATGGTAAAG+TGG | + | chr5.4:8163823-8163842 | None:intergenic | 40.0% | |
| TGTTCAAGGATCCATGCATA+AGG | - | chr5.4:8166180-8166199 | MS.gene015314:intron | 40.0% | |
| TTAGCGTAAGTGGGTGTATT+GGG | - | chr5.4:8164310-8164329 | MS.gene015314:intron | 40.0% | |
| TTATGCAAAGGGCTTAACAG+AGG | - | chr5.4:8164479-8164498 | MS.gene015314:intron | 40.0% | |
| TTGGATATGAAGATCCGAGA+AGG | - | chr5.4:8163734-8163753 | MS.gene015314:CDS | 40.0% | |
| TTTGATGAAGCCGAAATACG+AGG | + | chr5.4:8164683-8164702 | None:intergenic | 40.0% | |
| ! | GTTTGAGCATGTTGTTTGCA+TGG | + | chr5.4:8166376-8166395 | None:intergenic | 40.0% |
| ! | TATGGAGAAATTGATAGCCC+TGG | - | chr5.4:8165573-8165592 | MS.gene015314:intron | 40.0% |
| ! | TGCTTTTGCATCTTTGCTTG+TGG | - | chr5.4:8166607-8166626 | MS.gene015314:CDS | 40.0% |
| !! | AACATGGCTCTAACTGATCT+TGG | + | chr5.4:8166164-8166183 | None:intergenic | 40.0% |
| !! | AGATGATCGGAGAGTATTTC+GGG | + | chr5.4:8166275-8166294 | None:intergenic | 40.0% |
| !! | CACTAGTCTTGAATTCTCTG+AGG | - | chr5.4:8166571-8166590 | MS.gene015314:CDS | 40.0% |
| !! | GTATACTTTGGAATCATGCG+TGG | - | chr5.4:8164183-8164202 | MS.gene015314:CDS | 40.0% |
| !! | TTCTGCGGATTTGTTATTGC+AGG | - | chr5.4:8164953-8164972 | MS.gene015314:intron | 40.0% |
| !!! | ATGTTTTTGGTGAGAGGCTA+AGG | - | chr5.4:8163674-8163693 | MS.gene015314:CDS | 40.0% |
| !!! | CTTTGTGTTTTTTTGGCTGC+AGG | - | chr5.4:8164449-8164468 | MS.gene015314:intron | 40.0% |
| !!! | TTGTGTTTTTTTGGCTGCAG+GGG | - | chr5.4:8164451-8164470 | MS.gene015314:intron | 40.0% |
| AAACTAGCTGCTGCACAAGT+TGG | - | chr5.4:8166392-8166411 | MS.gene015314:intron | 45.0% | |
| AAGGCAAATGGCACATCCTA+TGG | + | chr5.4:8165134-8165153 | None:intergenic | 45.0% | |
| AAGGGCTTAACAGAGGATTG+GGG | - | chr5.4:8164486-8164505 | MS.gene015314:intron | 45.0% | |
| AATGCATGGATCACCCTTCT+CGG | + | chr5.4:8163751-8163770 | None:intergenic | 45.0% | |
| AATGGCACATCCTATGGCAA+TGG | + | chr5.4:8165128-8165147 | None:intergenic | 45.0% | |
| AGGTCTTCTCCTGACCAATT+TGG | + | chr5.4:8165178-8165197 | None:intergenic | 45.0% | |
| AGTCTCTATGTGCCATCTCT+AGG | - | chr5.4:8165678-8165697 | MS.gene015314:intron | 45.0% | |
| CAAAGGGCTTAACAGAGGAT+TGG | - | chr5.4:8164484-8164503 | MS.gene015314:intron | 45.0% | |
| CAGGGGCAACTTTATGCAAA+GGG | - | chr5.4:8164468-8164487 | MS.gene015314:intron | 45.0% | |
| CGGAACAATTTGCCTTCTCA+TGG | - | chr5.4:8166758-8166777 | MS.gene015314:CDS | 45.0% | |
| CGTGGTTTATTAGAAACGCG+AGG | - | chr5.4:8164201-8164220 | MS.gene015314:CDS | 45.0% | |
| CTTAGCGTAAGTGGGTGTAT+TGG | - | chr5.4:8164309-8164328 | MS.gene015314:intron | 45.0% | |
| GAGACGAGGTTGAGACTTTA+TGG | + | chr5.4:8166327-8166346 | None:intergenic | 45.0% | |
| GATCGAGATCTCATATAGCG+GGG | + | chr5.4:8164646-8164665 | None:intergenic | 45.0% | |
| GCAAATAGTGCCTACGTATC+CGG | + | chr5.4:8166058-8166077 | None:intergenic | 45.0% | |
| GCGACAGTTTCTTATGCTGT+TGG | + | chr5.4:8166243-8166262 | None:intergenic | 45.0% | |
| GGTCAAGGTAGACATGGAAA+AGG | - | chr5.4:8166413-8166432 | MS.gene015314:intron | 45.0% | |
| GTCAGACAACGATACAACAC+TGG | - | chr5.4:8165373-8165392 | MS.gene015314:CDS | 45.0% | |
| TCTCAACCTCGTCTCTTCTT+AGG | - | chr5.4:8166332-8166351 | MS.gene015314:intron | 45.0% | |
| TCTTCAACACACTGTCCACA+CGG | + | chr5.4:8165084-8165103 | None:intergenic | 45.0% | |
| TGACAGTACCTAGAATGCCT+TGG | + | chr5.4:8165790-8165809 | None:intergenic | 45.0% | |
| TGCAGTCGAAGGAAAACGAA+AGG | - | chr5.4:8166513-8166532 | MS.gene015314:intron | 45.0% | |
| TGCTTTGTCAAGTTACCGTG+TGG | - | chr5.4:8165066-8165085 | MS.gene015314:intron | 45.0% | |
| TTGCACTCTGTCCAATCTCA+TGG | + | chr5.4:8163831-8163850 | None:intergenic | 45.0% | |
| TTGGAACCTAAGAAGAGACG+AGG | + | chr5.4:8166341-8166360 | None:intergenic | 45.0% | |
| ! | AGAGTATTTCGGGAGAGCAA+TGG | + | chr5.4:8166265-8166284 | None:intergenic | 45.0% |
| ! | GAGCCACTTTACCATGAGAT+TGG | - | chr5.4:8163817-8163836 | MS.gene015314:CDS | 45.0% |
| ! | GGCGCTGCAGTTTTTCTTAT+AGG | - | chr5.4:8164593-8164612 | MS.gene015314:CDS | 45.0% |
| !! | CAAGTTGGTCAAGGTAGACA+TGG | - | chr5.4:8166407-8166426 | MS.gene015314:intron | 45.0% |
| !!! | GTGTGCATGTTTTTGGTGAG+AGG | - | chr5.4:8163668-8163687 | MS.gene015314:CDS | 45.0% |
| ACAGCCATGTAGAGCAACCA+CGG | + | chr5.4:8165872-8165891 | None:intergenic | 50.0% | |
| ACGCCTTCAACCTGAAGTGT+CGG | + | chr5.4:8165324-8165343 | None:intergenic | 50.0% | |
| AGGAAGGAGGACATGCAACT+AGG | + | chr5.4:8164368-8164387 | None:intergenic | 50.0% | |
| ATGCATAAGGGTTGCAGCAG+AGG | - | chr5.4:8166193-8166212 | MS.gene015314:intron | 50.0% | |
| CACTGGTGTCTGTGCTTCAT+AGG | - | chr5.4:8165390-8165409 | MS.gene015314:CDS | 50.0% | |
| CGCATATCCTCCATTGCCAT+AGG | - | chr5.4:8165115-8165134 | MS.gene015314:intron | 50.0% | |
| GCAGGGGCAACTTTATGCAA+AGG | - | chr5.4:8164467-8164486 | MS.gene015314:intron | 50.0% | |
| GCTAAGGAGAGTTCCTAGCT+TGG | - | chr5.4:8163690-8163709 | MS.gene015314:CDS | 50.0% | |
| GGAGCTGTTCTTCGCCAATT+CGG | - | chr5.4:8165841-8165860 | MS.gene015314:CDS | 50.0% | |
| GGTAGACATGGAAAAGGCTC+TGG | - | chr5.4:8166419-8166438 | MS.gene015314:intron | 50.0% | |
| GTAGTCTTCCAAGCCAAGCT+AGG | + | chr5.4:8163706-8163725 | None:intergenic | 50.0% | |
| GTCTGATGCGTAGGCACAAT+TGG | - | chr5.4:8165996-8166015 | MS.gene015314:intron | 50.0% | |
| GTTGTGCTTGAGTTCACTGC+TGG | - | chr5.4:8163874-8163893 | MS.gene015314:CDS | 50.0% | |
| TACACCGTGGTTGCTCTACA+TGG | - | chr5.4:8165865-8165884 | MS.gene015314:CDS | 50.0% | |
| TACGCATCAGACTGCAGAGT+GGG | + | chr5.4:8165988-8166007 | None:intergenic | 50.0% | |
| TCAAACACAGCCGGATACGT+AGG | - | chr5.4:8166045-8166064 | MS.gene015314:intron | 50.0% | |
| TCTGCTGCAACCCTTATGCA+TGG | + | chr5.4:8166194-8166213 | None:intergenic | 50.0% | |
| TGTGTGGATAAATTGGCGGG+TGG | + | chr5.4:8164274-8164293 | None:intergenic | 50.0% | |
| TTGGGCTGTCATGACTGTTG+TGG | - | chr5.4:8163852-8163871 | MS.gene015314:CDS | 50.0% | |
| ! | GCTTCGGTATTGAATTGGCC+AGG | - | chr5.4:8165744-8165763 | MS.gene015314:intron | 50.0% |
| ! | TCTCATATAGCGGGGAATCG+AGG | + | chr5.4:8164638-8164657 | None:intergenic | 50.0% |
| ! | TTGAAGGCGTGTATGGCATC+TGG | - | chr5.4:8165334-8165353 | MS.gene015314:CDS | 50.0% |
| !! | AACCTCGAGTTGATGTGTCG+CGG | - | chr5.4:8166738-8166757 | MS.gene015314:CDS | 50.0% |
| !! | CTTCAGGTTGAAGGCGTGTA+TGG | - | chr5.4:8165327-8165346 | MS.gene015314:CDS | 50.0% |
| !! | GCTTGGCTTGGAAGACTACA+TGG | - | chr5.4:8163707-8163726 | MS.gene015314:CDS | 50.0% |
| CAACCACGGTGTAGCCGAAT+TGG | + | chr5.4:8165858-8165877 | None:intergenic | 55.0% | |
| CACTCTGCAGTCTGATGCGT+AGG | - | chr5.4:8165987-8166006 | MS.gene015314:intron | 55.0% | |
| CTACGCATCAGACTGCAGAG+TGG | + | chr5.4:8165989-8166008 | None:intergenic | 55.0% | |
| CTATGTAGCCCCGACACTTC+AGG | - | chr5.4:8165311-8165330 | MS.gene015314:CDS | 55.0% | |
| GGAGAGTTCCTAGCTTGGCT+TGG | - | chr5.4:8163695-8163714 | MS.gene015314:CDS | 55.0% | |
| GGATTGGGGACACTGTTAGC+TGG | - | chr5.4:8164500-8164519 | MS.gene015314:intron | 55.0% | |
| GGCACATCCTATGGCAATGG+AGG | + | chr5.4:8165125-8165144 | None:intergenic | 55.0% | |
| TTCCGCGACACATCAACTCG+AGG | + | chr5.4:8166743-8166762 | None:intergenic | 55.0% | |
| ! | CCAGGCGTTGCATGCAAGTT+GGG | - | chr5.4:8165762-8165781 | MS.gene015314:intron | 55.0% |
| ! | CGCCTTCAACCTGAAGTGTC+GGG | + | chr5.4:8165323-8165342 | None:intergenic | 55.0% |
| ! | GTTGGGAGCCAAGGCATTCT+AGG | - | chr5.4:8165779-8165798 | MS.gene015314:intron | 55.0% |
| ! | TGCATGCAAGTTGGGAGCCA+AGG | - | chr5.4:8165770-8165789 | MS.gene015314:intron | 55.0% |
| !! | GCCTTCAACCTGAAGTGTCG+GGG | + | chr5.4:8165322-8165341 | None:intergenic | 55.0% |
| !! | GCTGCTGCACAAGTTGGTCA+AGG | - | chr5.4:8166398-8166417 | MS.gene015314:intron | 55.0% |
| CCCAACTTGCATGCAACGCC+TGG | + | chr5.4:8165765-8165784 | None:intergenic | 60.0% | |
| GGCGTGTATGGCATCTGGCA+TGG | - | chr5.4:8165339-8165358 | MS.gene015314:CDS | 60.0% | |
| TCGCCAATTCGGCTACACCG+TGG | - | chr5.4:8165852-8165871 | MS.gene015314:CDS | 60.0% | |
| ! | GCCAGGCGTTGCATGCAAGT+TGG | - | chr5.4:8165761-8165780 | MS.gene015314:intron | 60.0% |
| !! | GCCCCGACACTTCAGGTTGA+AGG | - | chr5.4:8165318-8165337 | MS.gene015314:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 8163646 | 8166790 | 8163646 | ID=MS.gene015314 |
| chr5.4 | mRNA | 8163646 | 8166790 | 8163646 | ID=MS.gene015314.t1;Parent=MS.gene015314 |
| chr5.4 | exon | 8166537 | 8166790 | 8166537 | ID=MS.gene015314.t1.exon1;Parent=MS.gene015314.t1 |
| chr5.4 | CDS | 8166537 | 8166790 | 8166537 | ID=cds.MS.gene015314.t1;Parent=MS.gene015314.t1 |
| chr5.4 | exon | 8166262 | 8166305 | 8166262 | ID=MS.gene015314.t1.exon2;Parent=MS.gene015314.t1 |
| chr5.4 | CDS | 8166262 | 8166305 | 8166262 | ID=cds.MS.gene015314.t1;Parent=MS.gene015314.t1 |
| chr5.4 | exon | 8165822 | 8165965 | 8165822 | ID=MS.gene015314.t1.exon3;Parent=MS.gene015314.t1 |
| chr5.4 | CDS | 8165822 | 8165965 | 8165822 | ID=cds.MS.gene015314.t1;Parent=MS.gene015314.t1 |
| chr5.4 | exon | 8165189 | 8165461 | 8165189 | ID=MS.gene015314.t1.exon4;Parent=MS.gene015314.t1 |
| chr5.4 | CDS | 8165189 | 8165461 | 8165189 | ID=cds.MS.gene015314.t1;Parent=MS.gene015314.t1 |
| chr5.4 | exon | 8164762 | 8164883 | 8164762 | ID=MS.gene015314.t1.exon5;Parent=MS.gene015314.t1 |
| chr5.4 | CDS | 8164762 | 8164883 | 8164762 | ID=cds.MS.gene015314.t1;Parent=MS.gene015314.t1 |
| chr5.4 | exon | 8164527 | 8164670 | 8164527 | ID=MS.gene015314.t1.exon6;Parent=MS.gene015314.t1 |
| chr5.4 | CDS | 8164527 | 8164670 | 8164527 | ID=cds.MS.gene015314.t1;Parent=MS.gene015314.t1 |
| chr5.4 | exon | 8163646 | 8164278 | 8163646 | ID=MS.gene015314.t1.exon7;Parent=MS.gene015314.t1 |
| chr5.4 | CDS | 8163646 | 8164278 | 8163646 | ID=cds.MS.gene015314.t1;Parent=MS.gene015314.t1 |
| Gene Sequence |
| Protein sequence |
