Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60398.t1 | XP_003608627.1 | 94.2 | 534 | 31 | 0 | 1 | 534 | 1 | 534 | 9.20E-283 | 982.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60398.t1 | O49696 | 62.6 | 551 | 143 | 8 | 1 | 506 | 1 | 533 | 2.0e-177 | 623.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60398.t1 | G7JGH1 | 94.2 | 534 | 31 | 0 | 1 | 534 | 1 | 534 | 6.7e-283 | 982.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene60398 | 0.840662 | 7.60E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene60398 | 0.829898 | 3.98E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene60398 | 0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene60398 | 0.805365 | 1.38E-49 | -1.69E-46 |
| MS.gene050400 | MS.gene60398 | 0.811274 | 7.60E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene60398 | 0.834735 | 2.52E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene60398 | 0.864808 | 9.31E-65 | -1.69E-46 |
| MS.gene050747 | MS.gene60398 | 0.807827 | 4.18E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene60398 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene60398 | 0.840402 | 8.88E-58 | -1.69E-46 |
| MS.gene051360 | MS.gene60398 | 0.840795 | 7.01E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene60398 | 0.838247 | 3.22E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene60398 | 0.858598 | 7.38E-63 | -1.69E-46 |
| MS.gene051666 | MS.gene60398 | 0.800112 | 1.68E-48 | -1.69E-46 |
| MS.gene051734 | MS.gene60398 | 0.821346 | 4.24E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene60398 | 0.821337 | 4.26E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene60398 | 0.857639 | 1.42E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene60398 | -0.803922 | 2.77E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene60398 | 0.800359 | 1.50E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene60398 | 0.853881 | 1.78E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene60398 | 0.814714 | 1.34E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene60398 | 0.815532 | 8.81E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene60398 | 0.851944 | 6.38E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene60398 | 0.835595 | 1.53E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene60398 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene60398 | 0.823769 | 1.16E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene60398 | 0.815699 | 8.09E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene60398 | 0.817148 | 3.83E-52 | -1.69E-46 |
| MS.gene052999 | MS.gene60398 | 0.800784 | 1.22E-48 | -1.69E-46 |
| MS.gene053169 | MS.gene60398 | 0.832354 | 9.91E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene60398 | 0.82076 | 5.79E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene60398 | 0.825626 | 4.23E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene60398 | 0.809666 | 1.69E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene60398 | 0.816076 | 6.66E-52 | -1.69E-46 |
| MS.gene053873 | MS.gene60398 | 0.812074 | 5.09E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene60398 | 0.825725 | 4.01E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene60398 | 0.802263 | 6.10E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene60398 | 0.82349 | 1.35E-53 | -1.69E-46 |
| MS.gene054556 | MS.gene60398 | 0.825379 | 4.84E-54 | -1.69E-46 |
| MS.gene054884 | MS.gene60398 | -0.801858 | 7.39E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene60398 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene60398 | 0.82098 | 5.15E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene60398 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene60398 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene055539 | MS.gene60398 | 0.867014 | 1.87E-65 | -1.69E-46 |
| MS.gene05553 | MS.gene60398 | 0.807401 | 5.15E-50 | -1.69E-46 |
| MS.gene05556 | MS.gene60398 | 0.812917 | 3.33E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene60398 | 0.866358 | 3.02E-65 | -1.69E-46 |
| MS.gene055744 | MS.gene60398 | 0.865326 | 6.40E-65 | -1.69E-46 |
| MS.gene055909 | MS.gene60398 | 0.873114 | 1.89E-67 | -1.69E-46 |
| MS.gene055911 | MS.gene60398 | 0.877589 | 5.57E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene60398 | 0.823239 | 1.54E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene60398 | 0.822482 | 2.31E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene60398 | 0.806629 | 7.50E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene60398 | 0.805626 | 1.22E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene60398 | 0.858657 | 7.09E-63 | -1.69E-46 |
| MS.gene056514 | MS.gene60398 | 0.831639 | 1.49E-55 | -1.69E-46 |
| MS.gene05664 | MS.gene60398 | 0.815474 | 9.08E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene60398 | 0.82074 | 5.85E-53 | -1.69E-46 |
| MS.gene056877 | MS.gene60398 | 0.834933 | 2.25E-56 | -1.69E-46 |
| MS.gene057019 | MS.gene60398 | 0.866479 | 2.77E-65 | -1.69E-46 |
| MS.gene057076 | MS.gene60398 | 0.819145 | 1.35E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene60398 | 0.800877 | 1.17E-48 | -1.69E-46 |
| MS.gene057396 | MS.gene60398 | 0.808852 | 2.53E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene60398 | 0.850182 | 2.00E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene60398 | 0.852995 | 3.20E-61 | -1.69E-46 |
| MS.gene057823 | MS.gene60398 | 0.859012 | 5.55E-63 | -1.69E-46 |
| MS.gene057825 | MS.gene60398 | 0.807725 | 4.39E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene60398 | 0.840996 | 6.21E-58 | -1.69E-46 |
| MS.gene058007 | MS.gene60398 | 0.934586 | 3.21E-96 | -1.69E-46 |
| MS.gene058019 | MS.gene60398 | 0.823741 | 1.18E-53 | -1.69E-46 |
| MS.gene058090 | MS.gene60398 | 0.801751 | 7.77E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene60398 | 0.840203 | 1.00E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene60398 | 0.82479 | 6.67E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene60398 | 0.881285 | 2.73E-70 | -1.69E-46 |
| MS.gene058700 | MS.gene60398 | 0.872724 | 2.55E-67 | -1.69E-46 |
| MS.gene058928 | MS.gene60398 | 0.807473 | 4.97E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene60398 | 0.849425 | 3.26E-60 | -1.69E-46 |
| MS.gene058995 | MS.gene60398 | 0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene60398 | 0.801743 | 7.79E-49 | -1.69E-46 |
| MS.gene059082 | MS.gene60398 | 0.818121 | 2.31E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene60398 | 0.817846 | 2.67E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene60398 | 0.832013 | 1.20E-55 | -1.69E-46 |
| MS.gene059455 | MS.gene60398 | 0.837687 | 4.49E-57 | -1.69E-46 |
| MS.gene059462 | MS.gene60398 | 0.823745 | 1.17E-53 | -1.69E-46 |
| MS.gene059674 | MS.gene60398 | 0.871845 | 5.01E-67 | -1.69E-46 |
| MS.gene059676 | MS.gene60398 | 0.824812 | 6.59E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene60398 | 0.836175 | 1.09E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene60398 | 0.8114 | 7.14E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene60398 | 0.825996 | 3.46E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene60398 | 0.802996 | 4.30E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene60398 | 0.835648 | 1.48E-56 | -1.69E-46 |
| MS.gene060372 | MS.gene60398 | 0.824954 | 6.10E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene60398 | 0.825711 | 4.04E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene60398 | 0.80431 | 2.30E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene60398 | 0.835677 | 1.46E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene60398 | 0.845223 | 4.64E-59 | -1.69E-46 |
| MS.gene06097 | MS.gene60398 | 0.80598 | 1.03E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene60398 | 0.836547 | 8.78E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46347 | MS.gene60398 | PPI |
| MS.gene60398 | MS.gene015314 | PPI |
| MS.gene60398 | MS.gene09658 | PPI |
| MS.gene60398 | MS.gene011648 | PPI |
| MS.gene60398 | MS.gene60396 | PPI |
| MS.gene60398 | MS.gene059674 | PPI |
| MS.gene60398 | MS.gene058006 | PPI |
| MS.gene058007 | MS.gene60398 | PPI |
| MS.gene60398 | MS.gene21471 | PPI |
| MS.gene011647 | MS.gene60398 | PPI |
| MS.gene60398 | MS.gene019141 | PPI |
| MS.gene60398 | MS.gene46346 | PPI |
| MS.gene60398 | MS.gene60397 | PPI |
| MS.gene60398 | MS.gene058007 | PPI |
| MS.gene60398 | MS.gene011649 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60398.t1 | MTR_4g098570 | 97.378 | 534 | 14 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1076 |
| MS.gene60398.t1 | MTR_4g098610 | 88.722 | 532 | 60 | 0 | 1 | 532 | 1 | 532 | 0.0 | 909 |
| MS.gene60398.t1 | MTR_5g014310 | 74.503 | 553 | 118 | 7 | 1 | 534 | 1 | 549 | 0.0 | 801 |
| MS.gene60398.t1 | MTR_1g115140 | 57.621 | 538 | 214 | 4 | 9 | 534 | 1 | 536 | 0.0 | 624 |
| MS.gene60398.t1 | MTR_1g115175 | 58.912 | 533 | 200 | 6 | 16 | 534 | 5 | 532 | 0.0 | 615 |
| MS.gene60398.t1 | MTR_1g115190 | 58.473 | 537 | 205 | 5 | 11 | 532 | 1 | 534 | 0.0 | 598 |
| MS.gene60398.t1 | MTR_1g077670 | 35.258 | 485 | 251 | 9 | 25 | 504 | 23 | 449 | 7.31e-96 | 300 |
| MS.gene60398.t1 | MTR_1g077660 | 38.832 | 394 | 218 | 5 | 23 | 399 | 4 | 391 | 1.71e-92 | 291 |
| MS.gene60398.t1 | MTR_4g051575 | 44.807 | 337 | 179 | 4 | 36 | 370 | 29 | 360 | 1.97e-92 | 290 |
| MS.gene60398.t1 | MTR_7g106260 | 43.314 | 344 | 185 | 3 | 49 | 389 | 42 | 378 | 1.43e-86 | 276 |
| MS.gene60398.t1 | MTR_8g104110 | 33.465 | 508 | 299 | 10 | 35 | 505 | 50 | 555 | 4.25e-86 | 277 |
| MS.gene60398.t1 | MTR_2g087288 | 36.765 | 408 | 241 | 7 | 49 | 446 | 37 | 437 | 3.47e-84 | 268 |
| MS.gene60398.t1 | MTR_6g084680 | 32.696 | 523 | 298 | 10 | 22 | 505 | 69 | 576 | 4.10e-81 | 265 |
| MS.gene60398.t1 | MTR_1g111250 | 34.086 | 487 | 286 | 10 | 48 | 511 | 73 | 547 | 6.36e-80 | 260 |
| MS.gene60398.t1 | MTR_7g094770 | 39.881 | 336 | 181 | 6 | 54 | 381 | 61 | 383 | 1.30e-79 | 256 |
| MS.gene60398.t1 | MTR_2g087285 | 39.595 | 346 | 201 | 4 | 49 | 391 | 37 | 377 | 7.20e-79 | 254 |
| MS.gene60398.t1 | MTR_8g104130 | 33.400 | 497 | 279 | 9 | 49 | 505 | 59 | 543 | 1.92e-78 | 257 |
| MS.gene60398.t1 | MTR_8g104120 | 32.227 | 512 | 302 | 11 | 35 | 505 | 46 | 553 | 5.22e-75 | 248 |
| MS.gene60398.t1 | MTR_0710s0020 | 66.480 | 179 | 59 | 1 | 16 | 194 | 6 | 183 | 1.51e-74 | 234 |
| MS.gene60398.t1 | MTR_4g051575 | 43.243 | 222 | 120 | 3 | 151 | 370 | 9 | 226 | 2.47e-52 | 181 |
| MS.gene60398.t1 | MTR_1g110380 | 38.235 | 102 | 39 | 2 | 126 | 227 | 6 | 83 | 4.18e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60398.t1 | AT4G17970 | 62.795 | 551 | 142 | 8 | 1 | 506 | 1 | 533 | 0.0 | 665 |
| MS.gene60398.t1 | AT5G46610 | 58.802 | 551 | 179 | 9 | 1 | 519 | 1 | 535 | 0.0 | 614 |
| MS.gene60398.t1 | AT5G46600 | 57.491 | 534 | 186 | 5 | 10 | 516 | 17 | 536 | 0.0 | 602 |
| MS.gene60398.t1 | AT5G46610 | 55.172 | 551 | 175 | 10 | 1 | 519 | 1 | 511 | 0.0 | 559 |
| MS.gene60398.t1 | AT5G46610 | 52.087 | 551 | 169 | 10 | 1 | 519 | 1 | 488 | 1.11e-178 | 512 |
| MS.gene60398.t1 | AT4G00910 | 35.356 | 478 | 256 | 7 | 45 | 519 | 54 | 481 | 9.55e-96 | 300 |
| MS.gene60398.t1 | AT1G08440 | 43.218 | 317 | 176 | 2 | 49 | 363 | 13 | 327 | 4.42e-88 | 280 |
| MS.gene60398.t1 | AT3G18440 | 33.204 | 515 | 303 | 9 | 43 | 518 | 73 | 585 | 3.84e-83 | 270 |
| MS.gene60398.t1 | AT1G08430 | 38.551 | 345 | 208 | 2 | 49 | 389 | 13 | 357 | 5.43e-80 | 259 |
| MS.gene60398.t1 | AT1G18420 | 34.000 | 500 | 288 | 12 | 46 | 505 | 80 | 577 | 3.09e-79 | 259 |
| MS.gene60398.t1 | AT3G11680 | 39.726 | 365 | 213 | 2 | 27 | 389 | 16 | 375 | 5.10e-78 | 254 |
| MS.gene60398.t1 | AT3G11680 | 39.726 | 365 | 213 | 2 | 27 | 389 | 14 | 373 | 6.58e-78 | 253 |
| MS.gene60398.t1 | AT1G18420 | 33.871 | 496 | 286 | 12 | 50 | 505 | 1 | 494 | 1.12e-77 | 253 |
| MS.gene60398.t1 | AT2G27240 | 40.413 | 339 | 184 | 4 | 49 | 379 | 13 | 341 | 2.05e-75 | 246 |
| MS.gene60398.t1 | AT2G27240 | 38.017 | 363 | 185 | 5 | 49 | 379 | 13 | 367 | 2.55e-72 | 239 |
| MS.gene60398.t1 | AT2G17470 | 31.006 | 487 | 304 | 11 | 49 | 508 | 31 | 512 | 5.03e-68 | 229 |
| MS.gene60398.t1 | AT2G17470 | 31.006 | 487 | 304 | 11 | 49 | 508 | 53 | 534 | 7.68e-68 | 229 |
| MS.gene60398.t1 | AT1G68600 | 29.714 | 525 | 324 | 14 | 20 | 505 | 11 | 529 | 1.08e-65 | 223 |
| MS.gene60398.t1 | AT1G25480 | 30.800 | 500 | 303 | 12 | 44 | 505 | 47 | 541 | 2.22e-65 | 222 |
| MS.gene60398.t1 | AT4G17585 | 58.095 | 105 | 31 | 4 | 1 | 103 | 1 | 94 | 1.06e-23 | 97.8 |
Find 128 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTCAGCTTTGTTAAAT+TGG | 0.126341 | 8.1:-24213536 | MS.gene60398:CDS |
| ATCTGTTCGAGTCCTGTTTA+AGG | 0.156833 | 8.1:-24213808 | MS.gene60398:CDS |
| TCATAATTCTTCTTTATATA+AGG | 0.201014 | 8.1:+24215159 | None:intergenic |
| GTATTGGCCAAAATGCTATT+TGG | 0.201944 | 8.1:-24215952 | MS.gene60398:CDS |
| TGTATCATTGCTTTATATAT+TGG | 0.204199 | 8.1:-24215990 | MS.gene60398:CDS |
| GCCTTATAACCTTTGTATAT+TGG | 0.218651 | 8.1:+24214762 | None:intergenic |
| CAAAGGTTATAAGGCTGTTT+TGG | 0.221522 | 8.1:-24214754 | MS.gene60398:CDS |
| CTGTTCAGCTGATACACTTT+TGG | 0.231447 | 8.1:+24213509 | None:intergenic |
| ATATTGGAGCCACTCTTTAA+AGG | 0.248165 | 8.1:-24215974 | MS.gene60398:CDS |
| CGGCATACCTTCTATAGATT+TGG | 0.257767 | 8.1:+24214930 | None:intergenic |
| TCAAGGCCATCATGAACTTT+AGG | 0.263685 | 8.1:+24216193 | None:intergenic |
| GACACTATTAGCAGGATTAT+TGG | 0.267423 | 8.1:-24215653 | MS.gene60398:CDS |
| AGATGATCAGAGAGTATTTC+TGG | 0.270507 | 8.1:+24213702 | None:intergenic |
| TGACAGCCCAAATAGCATTT+TGG | 0.284563 | 8.1:+24215945 | None:intergenic |
| GATTATGTTGCAAATGCTTC+TGG | 0.287896 | 8.1:-24215619 | MS.gene60398:CDS |
| AGGTCTTCCCCTGACCAATT+TGG | 0.290568 | 8.1:+24214988 | None:intergenic |
| ATAAAGAAGAATTATGATTA+TGG | 0.291591 | 8.1:-24215153 | MS.gene60398:CDS |
| AATGCATGGATCACCCTTCT+TGG | 0.296126 | 8.1:+24216037 | None:intergenic |
| GAAACCAAGAGTTGATGTTT+TGG | 0.304218 | 8.1:-24213256 | MS.gene60398:CDS |
| TCCAATATACAAAGGTTATA+AGG | 0.319254 | 8.1:-24214763 | MS.gene60398:CDS |
| CTACTCCATGAGAAGGTAAA+TGG | 0.323183 | 8.1:+24213229 | None:intergenic |
| GCTTAAAAGGATTCCTTGTT+TGG | 0.330987 | 8.1:-24216095 | MS.gene60398:CDS |
| CTGTTTGAGAACCGAAATTC+AGG | 0.333743 | 8.1:-24214322 | MS.gene60398:intron |
| ATGTTACGCTACCTGAATTT+CGG | 0.335086 | 8.1:+24214311 | None:intergenic |
| TGTTAACTGTTTCAAGTTAC+CGG | 0.336402 | 8.1:-24215101 | MS.gene60398:CDS |
| GTTGGGAGCCAAGGCATTCT+AGG | 0.347134 | 8.1:-24214431 | MS.gene60398:CDS |
| TGCTTCTTTGCTTGTGGAAA+CGG | 0.348987 | 8.1:-24213379 | MS.gene60398:CDS |
| GAAATGTTCTTCGCCAATTC+GGG | 0.349999 | 8.1:-24214368 | MS.gene60398:CDS |
| GTTGTTTGCTTGGATGTCAT+TGG | 0.352489 | 8.1:+24213617 | None:intergenic |
| TGTGGAAACGGTGGCAAAAC+TGG | 0.354584 | 8.1:-24213367 | MS.gene60398:CDS |
| GAGCCACTCTTTAAAGGTAT+TGG | 0.357520 | 8.1:-24215968 | MS.gene60398:CDS |
| AAAGGATTCCTTGTTTGGTT+TGG | 0.357623 | 8.1:-24216090 | MS.gene60398:CDS |
| TCCACAGCTTTCAAACTTGA+AGG | 0.368733 | 8.1:-24214958 | MS.gene60398:CDS |
| TATTGGCCAAAATGCTATTT+GGG | 0.383356 | 8.1:-24215951 | MS.gene60398:CDS |
| TTAGTATTTCCAAATTGGTC+AGG | 0.390261 | 8.1:-24214997 | MS.gene60398:CDS |
| GGAAATGTTCTTCGCCAATT+CGG | 0.402797 | 8.1:-24214369 | MS.gene60398:CDS |
| TCTCAACCACGACTCTTCTT+AGG | 0.410653 | 8.1:-24213642 | MS.gene60398:CDS |
| TCCTAGCCATAGCCATTTCA+AGG | 0.412138 | 8.1:+24216176 | None:intergenic |
| AAAGGGCTGAATAGAGGATT+GGG | 0.415501 | 8.1:-24215676 | MS.gene60398:CDS |
| TTATGCAAGGGTCCTTAAAC+AGG | 0.417088 | 8.1:+24213796 | None:intergenic |
| CTACCACTGTATACCCGAAT+TGG | 0.421456 | 8.1:+24214355 | None:intergenic |
| TTCTCCAAAACATCAACTCT+TGG | 0.424004 | 8.1:+24213252 | None:intergenic |
| GTGGCGAAAACCTTGAGAAA+TGG | 0.439639 | 8.1:-24216147 | MS.gene60398:CDS |
| AAAGAAGCAAAAGCAGCAAA+AGG | 0.440203 | 8.1:+24213393 | None:intergenic |
| GGCCTAGCCAAATCTATAGA+AGG | 0.440228 | 8.1:-24214937 | MS.gene60398:intron |
| TGAAACAGTTAACAAGTTGA+AGG | 0.442800 | 8.1:+24215110 | None:intergenic |
| TTAACAAGTTGAAGGTTAAG+AGG | 0.444355 | 8.1:+24215118 | None:intergenic |
| AGTTCATGATGGCCTTGAAA+TGG | 0.452690 | 8.1:-24216188 | MS.gene60398:CDS |
| ATTGACGAAGTTGAAGAACT+TGG | 0.456183 | 8.1:-24213336 | MS.gene60398:CDS |
| TGTTTAAGGACCCTTGCATA+AGG | 0.456552 | 8.1:-24213794 | MS.gene60398:CDS |
| CTTTCCATGAGAGGCGGCTA+TGG | 0.460245 | 8.1:+24213584 | None:intergenic |
| AAAGGAAGAAGAACAATTAC+CGG | 0.462474 | 8.1:-24213484 | MS.gene60398:CDS |
| CGCTTCTTCACCATAGCCAT+TGG | 0.466959 | 8.1:-24215048 | MS.gene60398:CDS |
| GAGAACCATTTACCTTCTCA+TGG | 0.469642 | 8.1:-24213234 | MS.gene60398:CDS |
| TGGCGAGCATGTTGTTTGCT+TGG | 0.473062 | 8.1:+24213607 | None:intergenic |
| ATTTAACAAAGCTGAAGAAT+CGG | 0.475562 | 8.1:+24213539 | None:intergenic |
| CAAAGGGCTGAATAGAGGAT+TGG | 0.475828 | 8.1:-24215677 | MS.gene60398:CDS |
| TTATGCAAAGGGCTGAATAG+AGG | 0.477408 | 8.1:-24215682 | MS.gene60398:CDS |
| GTGATCCATGCATTCAAAGT+TGG | 0.477949 | 8.1:-24216028 | MS.gene60398:CDS |
| TCGCAACAGTATGTAAAAGT+TGG | 0.479295 | 8.1:-24214390 | MS.gene60398:CDS |
| GTAGGCATTACATGCAAGTT+GGG | 0.482486 | 8.1:-24214448 | MS.gene60398:intron |
| CGGTTCTCAAACAGCCATGT+AGG | 0.484364 | 8.1:+24214331 | None:intergenic |
| GCCACCATAGCCGCCTCTCA+TGG | 0.486291 | 8.1:-24213588 | MS.gene60398:CDS |
| GTTGTGTATGGCAGGATCTA+CGG | 0.486401 | 8.1:-24215202 | MS.gene60398:intron |
| TGTAGGCATTACATGCAAGT+TGG | 0.498958 | 8.1:-24214449 | MS.gene60398:intron |
| GTTTGGTTTGGAAGACTACA+TGG | 0.504622 | 8.1:-24216078 | MS.gene60398:CDS |
| TACGTTTCTTCCATTTCTCA+AGG | 0.504702 | 8.1:+24216137 | None:intergenic |
| GCCTTCAAGTTTGAAAGCTG+TGG | 0.506523 | 8.1:+24214957 | None:intergenic |
| GCGCCGACTTCTTATGCTGT+TGG | 0.511246 | 8.1:+24213734 | None:intergenic |
| TACATGCAAGTTGGGAGCCA+AGG | 0.512610 | 8.1:-24214440 | MS.gene60398:CDS |
| TCCATGAGAGGCGGCTATGG+TGG | 0.516245 | 8.1:+24213587 | None:intergenic |
| AGTTGAAGAACTTGGGAGGT+TGG | 0.516985 | 8.1:-24213328 | MS.gene60398:CDS |
| AAGACTCATGAAAAGACAAA+TGG | 0.520278 | 8.1:+24215020 | None:intergenic |
| ATAAACCAACTTTGAATGCA+TGG | 0.520687 | 8.1:+24216023 | None:intergenic |
| GCTTACCAATGTTTCATCTG+TGG | 0.526234 | 8.1:+24214722 | None:intergenic |
| TAGTATTTCCAAATTGGTCA+GGG | 0.528241 | 8.1:-24214996 | MS.gene60398:CDS |
| AATGGCACAGCCAATGGCTA+TGG | 0.530289 | 8.1:+24215038 | None:intergenic |
| GATCTACGGCCACTTATATG+AGG | 0.539251 | 8.1:-24215188 | MS.gene60398:CDS |
| TTGACGAAGTTGAAGAACTT+GGG | 0.540827 | 8.1:-24213335 | MS.gene60398:CDS |
| AAGACAAATGGCACAGCCAA+TGG | 0.541186 | 8.1:+24215032 | None:intergenic |
| TGACAGTACCTAGAATGCCT+TGG | 0.545491 | 8.1:+24214423 | None:intergenic |
| GGTTCTCAAACAGCCATGTA+GGG | 0.547487 | 8.1:+24214332 | None:intergenic |
| CAGGGGCAACTTTATGCAAA+GGG | 0.551257 | 8.1:-24215693 | MS.gene60398:CDS |
| TCTGCTGCTAGCCTTATGCA+AGG | 0.556979 | 8.1:+24213783 | None:intergenic |
| GCCTTGAAATGGCTATGGCT+AGG | 0.564062 | 8.1:-24216177 | MS.gene60398:CDS |
| GGATTGGGGACACTATTAGC+AGG | 0.564656 | 8.1:-24215661 | MS.gene60398:CDS |
| AGAACAATTACCGGTACGTA+AGG | 0.566107 | 8.1:-24213475 | MS.gene60398:CDS |
| TATACAGTGGTAGCCCTACA+TGG | 0.566554 | 8.1:-24214345 | MS.gene60398:CDS |
| TGGCCAATACCTTTAAAGAG+TGG | 0.568510 | 8.1:+24215965 | None:intergenic |
| AGGAACGAACCTCATATAAG+TGG | 0.569111 | 8.1:+24215179 | None:intergenic |
| GGTTGATCATGTCTTGAAGA+TGG | 0.569323 | 8.1:-24215079 | MS.gene60398:CDS |
| TGATGGCCTTGAAATGGCTA+TGG | 0.571361 | 8.1:-24216182 | MS.gene60398:CDS |
| AACAGGACTCGAACAGATTG+TGG | 0.571380 | 8.1:+24213813 | None:intergenic |
| GCAGGGGCAACTTTATGCAA+AGG | 0.574504 | 8.1:-24215694 | MS.gene60398:intron |
| GTTAACTGTTTCAAGTTACC+GGG | 0.574845 | 8.1:-24215100 | MS.gene60398:CDS |
| AAAATCCACAGATGAAACAT+TGG | 0.576415 | 8.1:-24214727 | MS.gene60398:intron |
| TTTCTCAACACCTTACGTAC+CGG | 0.581127 | 8.1:+24213465 | None:intergenic |
| ATGATTCCTAAAGTTCATGA+TGG | 0.582610 | 8.1:-24216199 | MS.gene60398:CDS |
| GAGTGAGCTCTTTCCATGAG+AGG | 0.583770 | 8.1:+24213575 | None:intergenic |
| TCGGATGTGATGATCCAAGA+AGG | 0.583906 | 8.1:-24216051 | MS.gene60398:CDS |
| TTGCATAAGGCTAGCAGCAG+AGG | 0.586458 | 8.1:-24213781 | MS.gene60398:CDS |
| CTAATAGAAAACTCATCACC+AGG | 0.586493 | 8.1:+24213285 | None:intergenic |
| TTCTTTGCTTGTGGAAACGG+TGG | 0.592923 | 8.1:-24213376 | MS.gene60398:CDS |
| TACCTTCTATAGATTTGGCT+AGG | 0.594807 | 8.1:+24214935 | None:intergenic |
| AGAGTATTTCTGGTGAGCAA+TGG | 0.601068 | 8.1:+24213712 | None:intergenic |
| TGTATCAGCTGAACAGACAA+AGG | 0.608885 | 8.1:-24213502 | MS.gene60398:CDS |
| GGTGATATAAAATCATCTGA+AGG | 0.611420 | 8.1:-24214786 | MS.gene60398:CDS |
| CTGCTGCTAGCCTTATGCAA+GGG | 0.615929 | 8.1:+24213784 | None:intergenic |
| TGGAAGACTACATGGAAGGT+CGG | 0.617088 | 8.1:-24216070 | MS.gene60398:CDS |
| GGTTTGGAAGACTACATGGA+AGG | 0.620257 | 8.1:-24216074 | MS.gene60398:CDS |
| TGAAAGCTGTGGAATGATGA+AGG | 0.622018 | 8.1:+24214968 | None:intergenic |
| CGGATGTGATGATCCAAGAA+GGG | 0.624692 | 8.1:-24216050 | MS.gene60398:CDS |
| GAAGAATTATGATTATGGTG+TGG | 0.626346 | 8.1:-24215148 | MS.gene60398:CDS |
| GGCTGTCATGACTGTCGTCG+TGG | 0.630752 | 8.1:-24215930 | MS.gene60398:CDS |
| GTAGTCTTCCAAACCAAACA+AGG | 0.632776 | 8.1:+24216082 | None:intergenic |
| ACGAAGTTGAAGAACTTGGG+AGG | 0.635974 | 8.1:-24213332 | MS.gene60398:CDS |
| AATCACTCTACTCCATGAGA+AGG | 0.644576 | 8.1:+24213222 | None:intergenic |
| TAGCCAACAGCATAAGAAGT+CGG | 0.647738 | 8.1:-24213737 | MS.gene60398:CDS |
| AGTATTTCCAAATTGGTCAG+GGG | 0.650407 | 8.1:-24214995 | MS.gene60398:CDS |
| TGTTTCAAAGAGTATACACC+TGG | 0.658227 | 8.1:-24213303 | MS.gene60398:CDS |
| TTGGAGCCTAAGAAGAGTCG+TGG | 0.661184 | 8.1:+24213636 | None:intergenic |
| CAATGGCTATGGTGAAGAAG+CGG | 0.662768 | 8.1:+24215049 | None:intergenic |
| TCTGAAGGTCCAATATACAA+AGG | 0.663082 | 8.1:-24214771 | MS.gene60398:CDS |
| TCGCCAATTCGGGTATACAG+TGG | 0.664124 | 8.1:-24214358 | MS.gene60398:CDS |
| TGAGCTCTTTCCATGAGAGG+CGG | 0.667299 | 8.1:+24213578 | None:intergenic |
| AAGGGCTGAATAGAGGATTG+GGG | 0.679447 | 8.1:-24215675 | MS.gene60398:CDS |
| GCTATGGCTAGGAATAAGAG+TGG | 0.690552 | 8.1:-24216166 | MS.gene60398:CDS |
| TCTTCAAGACATGATCAACC+CGG | 0.698255 | 8.1:+24215082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGAAGAATTATGATTA+TGG | - | chr8.1:24214270-24214289 | MS.gene60398:intron | 15.0% |
| !! | ATAGTAGTTATATTTATAAG+TGG | - | chr8.1:24215261-24215280 | MS.gene60398:intron | 15.0% |
| !! | GGATAATAAATTGAATTAAA+AGG | + | chr8.1:24215580-24215599 | None:intergenic | 15.0% |
| !! | TAGTAGTTATATTTATAAGT+GGG | - | chr8.1:24215262-24215281 | MS.gene60398:intron | 15.0% |
| !! | TCATAATTCTTCTTTATATA+AGG | + | chr8.1:24214267-24214286 | None:intergenic | 15.0% |
| !!! | TATATATTTGATAACCAAAA+TGG | - | chr8.1:24213875-24213894 | MS.gene60398:intron | 15.0% |
| !! | AAACTTATCGAAATTATTTG+TGG | - | chr8.1:24214184-24214203 | MS.gene60398:intron | 20.0% |
| !! | ATAATATCTTGATCTTCAAA+TGG | - | chr8.1:24214936-24214955 | MS.gene60398:intron | 20.0% |
| !! | ATTTGAGCAATTTATAACAA+AGG | + | chr8.1:24213931-24213950 | None:intergenic | 20.0% |
| !! | ATTTGATACGTCTTAAAATT+TGG | + | chr8.1:24215337-24215356 | None:intergenic | 20.0% |
| !! | TAGTTGTAGAAATATGAAAA+AGG | - | chr8.1:24215487-24215506 | MS.gene60398:intron | 20.0% |
| !! | TATATTAGCAACTTATTGTA+AGG | - | chr8.1:24214558-24214577 | MS.gene60398:intron | 20.0% |
| !! | TATTCCATCAATGAATATAA+AGG | + | chr8.1:24215222-24215241 | None:intergenic | 20.0% |
| !! | TGTATCATTGCTTTATATAT+TGG | - | chr8.1:24213433-24213452 | MS.gene60398:CDS | 20.0% |
| !! | TTTGAGCAATTTATAACAAA+GGG | + | chr8.1:24213930-24213949 | None:intergenic | 20.0% |
| !!! | AATACTATTTGAGTTTAGAT+AGG | + | chr8.1:24213546-24213565 | None:intergenic | 20.0% |
| !!! | ATTTGTAATTTTTTTATGGC+AGG | - | chr8.1:24213711-24213730 | MS.gene60398:CDS | 20.0% |
| !!! | ATTTTGACAACAAATATTGT+CGG | + | chr8.1:24214069-24214088 | None:intergenic | 20.0% |
| !!! | TACTTTTTCATCTATGATAT+TGG | - | chr8.1:24213572-24213591 | MS.gene60398:CDS | 20.0% |
| !!! | TGTGTCAATGAATATTTTTA+TGG | - | chr8.1:24214598-24214617 | MS.gene60398:intron | 20.0% |
| !!! | TTACTATATTGTTTCTATCA+TGG | + | chr8.1:24213662-24213681 | None:intergenic | 20.0% |
| !!! | TTTGTAATTTTTTTATGGCA+GGG | - | chr8.1:24213712-24213731 | MS.gene60398:CDS | 20.0% |
| ! | AAAATACAAATAAATGCGAC+CGG | - | chr8.1:24213599-24213618 | MS.gene60398:CDS | 25.0% |
| ! | AATTTAGACTTATCTTTGAG+TGG | + | chr8.1:24215387-24215406 | None:intergenic | 25.0% |
| ! | ATTTAACAAAGCTGAAGAAT+CGG | + | chr8.1:24215887-24215906 | None:intergenic | 25.0% |
| ! | CTATGTATGTGTTATGAATT+CGG | + | chr8.1:24214516-24214535 | None:intergenic | 25.0% |
| ! | GATACCTTTATATTCATTGA+TGG | - | chr8.1:24215215-24215234 | MS.gene60398:intron | 25.0% |
| ! | TAACACATACATAGTATCAA+AGG | - | chr8.1:24214522-24214541 | MS.gene60398:intron | 25.0% |
| ! | TAAGACGTATCAAATTATGT+TGG | - | chr8.1:24215342-24215361 | MS.gene60398:intron | 25.0% |
| ! | TATGGAAAAATTGAAGTTTC+TGG | - | chr8.1:24214616-24214635 | MS.gene60398:intron | 25.0% |
| ! | TCCAATATACAAAGGTTATA+AGG | - | chr8.1:24214660-24214679 | MS.gene60398:intron | 25.0% |
| !! | ATAACAAAGGGAAATTTTCA+TGG | + | chr8.1:24213918-24213937 | None:intergenic | 25.0% |
| !! | ATACTTAGCATGATTTTGAA+TGG | + | chr8.1:24214745-24214764 | None:intergenic | 25.0% |
| !! | ATTTCGATAAGTTTTCGAAT+TGG | + | chr8.1:24214178-24214197 | None:intergenic | 25.0% |
| !! | GTCTTTTAGTATTTCCAAAT+TGG | - | chr8.1:24214421-24214440 | MS.gene60398:CDS | 25.0% |
| !! | TAACTTTAGTAGAACCATTT+TGG | + | chr8.1:24213892-24213911 | None:intergenic | 25.0% |
| !! | TGATGAGTTTTCTATTAGTT+CGG | - | chr8.1:24216143-24216162 | MS.gene60398:CDS | 25.0% |
| !!! | ATTCTTCAGCTTTGTTAAAT+TGG | - | chr8.1:24215887-24215906 | MS.gene60398:intron | 25.0% |
| !!! | TTAGAATTTGCTAAATCGTA+GGG | + | chr8.1:24215453-24215472 | None:intergenic | 25.0% |
| !!! | TTGTAATTTTTTTATGGCAG+GGG | - | chr8.1:24213713-24213732 | MS.gene60398:CDS | 25.0% |
| AAAATCCACAGATGAAACAT+TGG | - | chr8.1:24214696-24214715 | MS.gene60398:intron | 30.0% | |
| AAAGGAAGAAGAACAATTAC+CGG | - | chr8.1:24215939-24215958 | MS.gene60398:CDS | 30.0% | |
| AAGACTCATGAAAAGACAAA+TGG | + | chr8.1:24214406-24214425 | None:intergenic | 30.0% | |
| AATTCCAAAAGCAAATTCAC+GGG | + | chr8.1:24215299-24215318 | None:intergenic | 30.0% | |
| ACGTATCAAATTATGTTGGT+GGG | - | chr8.1:24215346-24215365 | MS.gene60398:intron | 30.0% | |
| ACTATTTGAACTAGTCAAAG+TGG | + | chr8.1:24215246-24215265 | None:intergenic | 30.0% | |
| ATAAACCAACTTTGAATGCA+TGG | + | chr8.1:24213403-24213422 | None:intergenic | 30.0% | |
| ATGATTCCTAAAGTTCATGA+TGG | - | chr8.1:24213224-24213243 | MS.gene60398:CDS | 30.0% | |
| CAATTCCAAAAGCAAATTCA+CGG | + | chr8.1:24215300-24215319 | None:intergenic | 30.0% | |
| GAAGAATTATGATTATGGTG+TGG | - | chr8.1:24214275-24214294 | MS.gene60398:intron | 30.0% | |
| GCCTTATAACCTTTGTATAT+TGG | + | chr8.1:24214664-24214683 | None:intergenic | 30.0% | |
| GGTGATATAAAATCATCTGA+AGG | - | chr8.1:24214637-24214656 | MS.gene60398:intron | 30.0% | |
| TAGTATTTCCAAATTGGTCA+GGG | - | chr8.1:24214427-24214446 | MS.gene60398:CDS | 30.0% | |
| TGAATGGATCAAAACAAGAT+TGG | + | chr8.1:24214729-24214748 | None:intergenic | 30.0% | |
| TTAGTATTTCCAAATTGGTC+AGG | - | chr8.1:24214426-24214445 | MS.gene60398:CDS | 30.0% | |
| TTTCGAATTGGTTACAATTG+AGG | + | chr8.1:24214166-24214185 | None:intergenic | 30.0% | |
| ! | AAGAAACGTATCCATGTTTT+TGG | - | chr8.1:24213299-24213318 | MS.gene60398:CDS | 30.0% |
| ! | TATTGGCCAAAATGCTATTT+GGG | - | chr8.1:24213472-24213491 | MS.gene60398:CDS | 30.0% |
| ! | TGAAACAGTTAACAAGTTGA+AGG | + | chr8.1:24214316-24214335 | None:intergenic | 30.0% |
| ! | TTAACAAGTTGAAGGTTAAG+AGG | + | chr8.1:24214308-24214327 | None:intergenic | 30.0% |
| !! | CTTAGAATTTGCTAAATCGT+AGG | + | chr8.1:24215454-24215473 | None:intergenic | 30.0% |
| !! | TCCTGTTAATTTGTTGTGTA+TGG | - | chr8.1:24214209-24214228 | MS.gene60398:intron | 30.0% |
| !! | TGTTAACTGTTTCAAGTTAC+CGG | - | chr8.1:24214322-24214341 | MS.gene60398:intron | 30.0% |
| AAAGAAGCAAAAGCAGCAAA+AGG | + | chr8.1:24216033-24216052 | None:intergenic | 35.0% | |
| AGTATTTCCAAATTGGTCAG+GGG | - | chr8.1:24214428-24214447 | MS.gene60398:CDS | 35.0% | |
| ATATTGGAGCCACTCTTTAA+AGG | - | chr8.1:24213449-24213468 | MS.gene60398:CDS | 35.0% | |
| ATGTTACGCTACCTGAATTT+CGG | + | chr8.1:24215115-24215134 | None:intergenic | 35.0% | |
| ATTCCAAAAGCAAATTCACG+GGG | + | chr8.1:24215298-24215317 | None:intergenic | 35.0% | |
| ATTGACGAAGTTGAAGAACT+TGG | - | chr8.1:24216087-24216106 | MS.gene60398:CDS | 35.0% | |
| CTAATAGAAAACTCATCACC+AGG | + | chr8.1:24216141-24216160 | None:intergenic | 35.0% | |
| CTTTCTTTCAATCACATCGA+CGG | + | chr8.1:24214003-24214022 | None:intergenic | 35.0% | |
| GACACTATTAGCAGGATTAT+TGG | - | chr8.1:24213770-24213789 | MS.gene60398:CDS | 35.0% | |
| GACGTATCAAATTATGTTGG+TGG | - | chr8.1:24215345-24215364 | MS.gene60398:intron | 35.0% | |
| GACTTAGTACGCATAATTTG+TGG | + | chr8.1:24214826-24214845 | None:intergenic | 35.0% | |
| GATTATGTTGCAAATGCTTC+TGG | - | chr8.1:24213804-24213823 | MS.gene60398:CDS | 35.0% | |
| GCCATACACAACAAATTAAC+AGG | + | chr8.1:24214213-24214232 | None:intergenic | 35.0% | |
| GCTTAAAAGGATTCCTTGTT+TGG | - | chr8.1:24213328-24213347 | MS.gene60398:CDS | 35.0% | |
| TACCTTCTATAGATTTGGCT+AGG | + | chr8.1:24214491-24214510 | None:intergenic | 35.0% | |
| TACGTTTCTTCCATTTCTCA+AGG | + | chr8.1:24213289-24213308 | None:intergenic | 35.0% | |
| TCGCAACAGTATGTAAAAGT+TGG | - | chr8.1:24215033-24215052 | MS.gene60398:CDS | 35.0% | |
| TCTGAAGGTCCAATATACAA+AGG | - | chr8.1:24214652-24214671 | MS.gene60398:intron | 35.0% | |
| TTCTCCAAAACATCAACTCT+TGG | + | chr8.1:24216174-24216193 | None:intergenic | 35.0% | |
| TTGACGAAGTTGAAGAACTT+GGG | - | chr8.1:24216088-24216107 | MS.gene60398:CDS | 35.0% | |
| ! | AAAGGATTCCTTGTTTGGTT+TGG | - | chr8.1:24213333-24213352 | MS.gene60398:CDS | 35.0% |
| ! | ACTTTTACATACTGTTGCGA+TGG | + | chr8.1:24215033-24215052 | None:intergenic | 35.0% |
| ! | CAAAGGTTATAAGGCTGTTT+TGG | - | chr8.1:24214669-24214688 | MS.gene60398:intron | 35.0% |
| ! | GCAGTTGCAGTTTTTGTAAT+AGG | - | chr8.1:24213852-24213871 | MS.gene60398:intron | 35.0% |
| ! | GGTTGTGTTTTCAATTGTGT+AGG | - | chr8.1:24214957-24214976 | MS.gene60398:CDS | 35.0% |
| ! | GTATTGGCCAAAATGCTATT+TGG | - | chr8.1:24213471-24213490 | MS.gene60398:CDS | 35.0% |
| ! | TGTTTCAAAGAGTATACACC+TGG | - | chr8.1:24216120-24216139 | MS.gene60398:CDS | 35.0% |
| !! | AGATGATCAGAGAGTATTTC+TGG | + | chr8.1:24215724-24215743 | None:intergenic | 35.0% |
| !! | GTTAACTGTTTCAAGTTACC+GGG | - | chr8.1:24214323-24214342 | MS.gene60398:CDS | 35.0% |
| !! | GTTAATTTGTTGTGTATGGC+AGG | - | chr8.1:24214213-24214232 | MS.gene60398:intron | 35.0% |
| !! | TTTTTGGTGAGAGGCTTAAA+AGG | - | chr8.1:24213315-24213334 | MS.gene60398:CDS | 35.0% |
| !!! | GAAACCAAGAGTTGATGTTT+TGG | - | chr8.1:24216167-24216186 | MS.gene60398:CDS | 35.0% |
| AAAGGGCTGAATAGAGGATT+GGG | - | chr8.1:24213747-24213766 | MS.gene60398:CDS | 40.0% | |
| AAATAACTCCCGCGTAAAGT+GGG | - | chr8.1:24215416-24215435 | MS.gene60398:intron | 40.0% | |
| ACAAATAAATGCGACCGGTA+CGG | - | chr8.1:24213604-24213623 | MS.gene60398:CDS | 40.0% | |
| ACAGATTGTGGTGTCTGAAA+AGG | + | chr8.1:24215601-24215620 | None:intergenic | 40.0% | |
| AGAACAATTACCGGTACGTA+AGG | - | chr8.1:24215948-24215967 | MS.gene60398:CDS | 40.0% | |
| AGGAACGAACCTCATATAAG+TGG | + | chr8.1:24214247-24214266 | None:intergenic | 40.0% | |
| ATATAGCTCACACTAAGAGC+TGG | - | chr8.1:24214766-24214785 | MS.gene60398:CDS | 40.0% | |
| ATCTGTTCGAGTCCTGTTTA+AGG | - | chr8.1:24215615-24215634 | MS.gene60398:CDS | 40.0% | |
| CACGGACAGATTCACAAAAA+TGG | + | chr8.1:24215160-24215179 | None:intergenic | 40.0% | |
| CGGCATACCTTCTATAGATT+TGG | + | chr8.1:24214496-24214515 | None:intergenic | 40.0% | |
| CTACTCCATGAGAAGGTAAA+TGG | + | chr8.1:24216197-24216216 | None:intergenic | 40.0% | |
| CTGTTTGAGAACCGAAATTC+AGG | - | chr8.1:24215101-24215120 | MS.gene60398:CDS | 40.0% | |
| GAAATGTTCTTCGCCAATTC+GGG | - | chr8.1:24215055-24215074 | MS.gene60398:CDS | 40.0% | |
| GAGAACCATTTACCTTCTCA+TGG | - | chr8.1:24216189-24216208 | MS.gene60398:CDS | 40.0% | |
| GAGATGCTAAACTGTGATCA+CGG | + | chr8.1:24215178-24215197 | None:intergenic | 40.0% | |
| GCTACAAGATAGTGCAAAGA+AGG | + | chr8.1:24214132-24214151 | None:intergenic | 40.0% | |
| GCTTACCAATGTTTCATCTG+TGG | + | chr8.1:24214704-24214723 | None:intergenic | 40.0% | |
| GGAAATGTTCTTCGCCAATT+CGG | - | chr8.1:24215054-24215073 | MS.gene60398:CDS | 40.0% | |
| GGTTGATCATGTCTTGAAGA+TGG | - | chr8.1:24214344-24214363 | MS.gene60398:CDS | 40.0% | |
| GTAGGCATTACATGCAAGTT+GGG | - | chr8.1:24214975-24214994 | MS.gene60398:CDS | 40.0% | |
| GTAGTCTTCCAAACCAAACA+AGG | + | chr8.1:24213344-24213363 | None:intergenic | 40.0% | |
| GTGATCCATGCATTCAAAGT+TGG | - | chr8.1:24213395-24213414 | MS.gene60398:CDS | 40.0% | |
| GTTGTTTGCTTGGATGTCAT+TGG | + | chr8.1:24215809-24215828 | None:intergenic | 40.0% | |
| TAAGCCTCTCACCAAAAACA+TGG | + | chr8.1:24213313-24213332 | None:intergenic | 40.0% | |
| TAGCCAACAGCATAAGAAGT+CGG | - | chr8.1:24215686-24215705 | MS.gene60398:CDS | 40.0% | |
| TCAAGGCCATCATGAACTTT+AGG | + | chr8.1:24213233-24213252 | None:intergenic | 40.0% | |
| TCCACAGCTTTCAAACTTGA+AGG | - | chr8.1:24214465-24214484 | MS.gene60398:intron | 40.0% | |
| TCTTCAAGACATGATCAACC+CGG | + | chr8.1:24214344-24214363 | None:intergenic | 40.0% | |
| TGAAAGCTGTGGAATGATGA+AGG | + | chr8.1:24214458-24214477 | None:intergenic | 40.0% | |
| TGCTTCTTTGCTTGTGGAAA+CGG | - | chr8.1:24216044-24216063 | MS.gene60398:CDS | 40.0% | |
| TGTAGGCATTACATGCAAGT+TGG | - | chr8.1:24214974-24214993 | MS.gene60398:CDS | 40.0% | |
| TGTATCAGCTGAACAGACAA+AGG | - | chr8.1:24215921-24215940 | MS.gene60398:CDS | 40.0% | |
| TGTTTAAGGACCCTTGCATA+AGG | - | chr8.1:24215629-24215648 | MS.gene60398:CDS | 40.0% | |
| TTATGCAAAGGGCTGAATAG+AGG | - | chr8.1:24213741-24213760 | MS.gene60398:CDS | 40.0% | |
| TTATGCAAGGGTCCTTAAAC+AGG | + | chr8.1:24215630-24215649 | None:intergenic | 40.0% | |
| TTTCTCAACACCTTACGTAC+CGG | + | chr8.1:24215961-24215980 | None:intergenic | 40.0% | |
| TTTGCTAAATCGTAGGGTGA+AGG | + | chr8.1:24215447-24215466 | None:intergenic | 40.0% | |
| ! | AGTTCATGATGGCCTTGAAA+TGG | - | chr8.1:24213235-24213254 | MS.gene60398:CDS | 40.0% |
| ! | CTGTTCAGCTGATACACTTT+TGG | + | chr8.1:24215917-24215936 | None:intergenic | 40.0% |
| ! | GAGCCACTCTTTAAAGGTAT+TGG | - | chr8.1:24213455-24213474 | MS.gene60398:CDS | 40.0% |
| ! | GAGTCGTGGTTGAGATTTTA+TGG | + | chr8.1:24215776-24215795 | None:intergenic | 40.0% |
| ! | TGACAGCCCAAATAGCATTT+TGG | + | chr8.1:24213481-24213500 | None:intergenic | 40.0% |
| ! | TGCTTTTGCTTCTTTGCTTG+TGG | - | chr8.1:24216038-24216057 | MS.gene60398:CDS | 40.0% |
| ! | TGGCCAATACCTTTAAAGAG+TGG | + | chr8.1:24213461-24213480 | None:intergenic | 40.0% |
| !! | AGAGTATTTCTGGTGAGCAA+TGG | + | chr8.1:24215714-24215733 | None:intergenic | 40.0% |
| !! | GTTTGGTTTGGAAGACTACA+TGG | - | chr8.1:24213345-24213364 | MS.gene60398:CDS | 40.0% |
| !!! | GTATCCATGTTTTTGGTGAG+AGG | - | chr8.1:24213306-24213325 | MS.gene60398:CDS | 40.0% |
| AACAGGACTCGAACAGATTG+TGG | + | chr8.1:24215613-24215632 | None:intergenic | 45.0% | |
| AAGACAAATGGCACAGCCAA+TGG | + | chr8.1:24214394-24214413 | None:intergenic | 45.0% | |
| AAGGGCTGAATAGAGGATTG+GGG | - | chr8.1:24213748-24213767 | MS.gene60398:CDS | 45.0% | |
| AATAACTCCCGCGTAAAGTG+GGG | - | chr8.1:24215417-24215436 | MS.gene60398:intron | 45.0% | |
| AATGCATGGATCACCCTTCT+TGG | + | chr8.1:24213389-24213408 | None:intergenic | 45.0% | |
| ACGAAGTTGAAGAACTTGGG+AGG | - | chr8.1:24216091-24216110 | MS.gene60398:CDS | 45.0% | |
| AGTTGAAGAACTTGGGAGGT+TGG | - | chr8.1:24216095-24216114 | MS.gene60398:CDS | 45.0% | |
| CAAAGGGCTGAATAGAGGAT+TGG | - | chr8.1:24213746-24213765 | MS.gene60398:CDS | 45.0% | |
| CAAATAACTCCCGCGTAAAG+TGG | - | chr8.1:24215415-24215434 | MS.gene60398:intron | 45.0% | |
| CAATGGCTATGGTGAAGAAG+CGG | + | chr8.1:24214377-24214396 | None:intergenic | 45.0% | |
| CACTTTACGCGGGAGTTATT+TGG | + | chr8.1:24215417-24215436 | None:intergenic | 45.0% | |
| CAGGGGCAACTTTATGCAAA+GGG | - | chr8.1:24213730-24213749 | MS.gene60398:CDS | 45.0% | |
| CGGATGTGATGATCCAAGAA+GGG | - | chr8.1:24213373-24213392 | MS.gene60398:CDS | 45.0% | |
| CTACCACTGTATACCCGAAT+TGG | + | chr8.1:24215071-24215090 | None:intergenic | 45.0% | |
| GATCTACGGCCACTTATATG+AGG | - | chr8.1:24214235-24214254 | MS.gene60398:intron | 45.0% | |
| GCACTATCTTGTAGCTAGTC+TGG | - | chr8.1:24214137-24214156 | MS.gene60398:intron | 45.0% | |
| GCTATGGCTAGGAATAAGAG+TGG | - | chr8.1:24213257-24213276 | MS.gene60398:CDS | 45.0% | |
| GGCCTAGCCAAATCTATAGA+AGG | - | chr8.1:24214486-24214505 | MS.gene60398:intron | 45.0% | |
| GGTTCTCAAACAGCCATGTA+GGG | + | chr8.1:24215094-24215113 | None:intergenic | 45.0% | |
| GGTTTGGAAGACTACATGGA+AGG | - | chr8.1:24213349-24213368 | MS.gene60398:CDS | 45.0% | |
| GTGGCGAAAACCTTGAGAAA+TGG | - | chr8.1:24213276-24213295 | MS.gene60398:CDS | 45.0% | |
| GTTGTGTATGGCAGGATCTA+CGG | - | chr8.1:24214221-24214240 | MS.gene60398:intron | 45.0% | |
| TATACAGTGGTAGCCCTACA+TGG | - | chr8.1:24215078-24215097 | MS.gene60398:CDS | 45.0% | |
| TCCTAGCCATAGCCATTTCA+AGG | + | chr8.1:24213250-24213269 | None:intergenic | 45.0% | |
| TCGGATGTGATGATCCAAGA+AGG | - | chr8.1:24213372-24213391 | MS.gene60398:CDS | 45.0% | |
| TCTCAACCACGACTCTTCTT+AGG | - | chr8.1:24215781-24215800 | MS.gene60398:intron | 45.0% | |
| TGACAGTACCTAGAATGCCT+TGG | + | chr8.1:24215003-24215022 | None:intergenic | 45.0% | |
| TGGAAGACTACATGGAAGGT+CGG | - | chr8.1:24213353-24213372 | MS.gene60398:CDS | 45.0% | |
| TTCTTTGCTTGTGGAAACGG+TGG | - | chr8.1:24216047-24216066 | MS.gene60398:CDS | 45.0% | |
| ! | CTATCTTGTAGCTAGTCTGG+AGG | - | chr8.1:24214140-24214159 | MS.gene60398:intron | 45.0% |
| ! | GAGATTTTATGGCTGCGTTG+AGG | + | chr8.1:24215765-24215784 | None:intergenic | 45.0% |
| ! | GCCTTCAAGTTTGAAAGCTG+TGG | + | chr8.1:24214469-24214488 | None:intergenic | 45.0% |
| ! | TGATGGCCTTGAAATGGCTA+TGG | - | chr8.1:24213241-24213260 | MS.gene60398:CDS | 45.0% |
| !! | TGAATAAATAAATATTTATT+AGG | + | chr8.1:24214882-24214901 | None:intergenic | 5.0% |
| !!! | TTTAATTTGTAATTTTTTTA+TGG | - | chr8.1:24213707-24213726 | MS.gene60398:CDS | 5.0% |
| AATGGCACAGCCAATGGCTA+TGG | + | chr8.1:24214388-24214407 | None:intergenic | 50.0% | |
| AGGTCTTCCCCTGACCAATT+TGG | + | chr8.1:24214438-24214457 | None:intergenic | 50.0% | |
| ATAACTCCCGCGTAAAGTGG+GGG | - | chr8.1:24215418-24215437 | MS.gene60398:intron | 50.0% | |
| ATCCACAATTGCTGCCGTAC+CGG | + | chr8.1:24213621-24213640 | None:intergenic | 50.0% | |
| CCAAAAGCAAATTCACGGGG+TGG | + | chr8.1:24215295-24215314 | None:intergenic | 50.0% | |
| CGCTTCTTCACCATAGCCAT+TGG | - | chr8.1:24214375-24214394 | MS.gene60398:CDS | 50.0% | |
| CGGTTCTCAAACAGCCATGT+AGG | + | chr8.1:24215095-24215114 | None:intergenic | 50.0% | |
| GAGTGAGCTCTTTCCATGAG+AGG | + | chr8.1:24215851-24215870 | None:intergenic | 50.0% | |
| GCAGGGGCAACTTTATGCAA+AGG | - | chr8.1:24213729-24213748 | MS.gene60398:CDS | 50.0% | |
| GCCTTGAAATGGCTATGGCT+AGG | - | chr8.1:24213246-24213265 | MS.gene60398:CDS | 50.0% | |
| GGATTGGGGACACTATTAGC+AGG | - | chr8.1:24213762-24213781 | MS.gene60398:CDS | 50.0% | |
| TCGCCAATTCGGGTATACAG+TGG | - | chr8.1:24215065-24215084 | MS.gene60398:CDS | 50.0% | |
| TCTTTGAGTGGCTCGATGAC+TGG | + | chr8.1:24215375-24215394 | None:intergenic | 50.0% | |
| TGAGCTCTTTCCATGAGAGG+CGG | + | chr8.1:24215848-24215867 | None:intergenic | 50.0% | |
| TGTGGAAACGGTGGCAAAAC+TGG | - | chr8.1:24216056-24216075 | MS.gene60398:CDS | 50.0% | |
| TTGCATAAGGCTAGCAGCAG+AGG | - | chr8.1:24215642-24215661 | MS.gene60398:CDS | 50.0% | |
| TTGGAGCCTAAGAAGAGTCG+TGG | + | chr8.1:24215790-24215809 | None:intergenic | 50.0% | |
| ! | TACATGCAAGTTGGGAGCCA+AGG | - | chr8.1:24214983-24215002 | MS.gene60398:CDS | 50.0% |
| ! | TGGCGAGCATGTTGTTTGCT+TGG | + | chr8.1:24215819-24215838 | None:intergenic | 50.0% |
| !! | CCACCCCGTGAATTTGCTTT+TGG | - | chr8.1:24215292-24215311 | MS.gene60398:intron | 50.0% |
| !! | CTGCTGCTAGCCTTATGCAA+GGG | + | chr8.1:24215642-24215661 | None:intergenic | 50.0% |
| !! | TCTGCTGCTAGCCTTATGCA+AGG | + | chr8.1:24215643-24215662 | None:intergenic | 50.0% |
| !!! | GTGGTTTTCGAGTTCACTGC+AGG | - | chr8.1:24213512-24213531 | MS.gene60398:CDS | 50.0% |
| AAGGTTGCCCCCACTTTACG+CGG | + | chr8.1:24215428-24215447 | None:intergenic | 55.0% | |
| CTTTCCATGAGAGGCGGCTA+TGG | + | chr8.1:24215842-24215861 | None:intergenic | 55.0% | |
| ! | GTTGGGAGCCAAGGCATTCT+AGG | - | chr8.1:24214992-24215011 | MS.gene60398:CDS | 55.0% |
| !! | GCGCCGACTTCTTATGCTGT+TGG | + | chr8.1:24215692-24215711 | None:intergenic | 55.0% |
| AGGTTGCCCCCACTTTACGC+GGG | + | chr8.1:24215427-24215446 | None:intergenic | 60.0% | |
| GACCGGTACGGCAGCAATTG+TGG | - | chr8.1:24213616-24213635 | MS.gene60398:CDS | 60.0% | |
| GGCTGTCATGACTGTCGTCG+TGG | - | chr8.1:24213493-24213512 | MS.gene60398:CDS | 60.0% | |
| TCCATGAGAGGCGGCTATGG+TGG | + | chr8.1:24215839-24215858 | None:intergenic | 60.0% | |
| GCCACCATAGCCGCCTCTCA+TGG | - | chr8.1:24215835-24215854 | MS.gene60398:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 24213224 | 24216221 | 24213224 | ID=MS.gene60398 |
| chr8.1 | mRNA | 24213224 | 24216221 | 24213224 | ID=MS.gene60398.t1;Parent=MS.gene60398 |
| chr8.1 | exon | 24215912 | 24216221 | 24215912 | ID=MS.gene60398.t1.exon1;Parent=MS.gene60398.t1 |
| chr8.1 | CDS | 24215912 | 24216221 | 24215912 | ID=cds.MS.gene60398.t1;Parent=MS.gene60398.t1 |
| chr8.1 | exon | 24215572 | 24215712 | 24215572 | ID=MS.gene60398.t1.exon2;Parent=MS.gene60398.t1 |
| chr8.1 | CDS | 24215572 | 24215712 | 24215572 | ID=cds.MS.gene60398.t1;Parent=MS.gene60398.t1 |
| chr8.1 | exon | 24214938 | 24215210 | 24214938 | ID=MS.gene60398.t1.exon3;Parent=MS.gene60398.t1 |
| chr8.1 | CDS | 24214938 | 24215210 | 24214938 | ID=cds.MS.gene60398.t1;Parent=MS.gene60398.t1 |
| chr8.1 | exon | 24214728 | 24214849 | 24214728 | ID=MS.gene60398.t1.exon4;Parent=MS.gene60398.t1 |
| chr8.1 | CDS | 24214728 | 24214849 | 24214728 | ID=cds.MS.gene60398.t1;Parent=MS.gene60398.t1 |
| chr8.1 | exon | 24214323 | 24214466 | 24214323 | ID=MS.gene60398.t1.exon5;Parent=MS.gene60398.t1 |
| chr8.1 | CDS | 24214323 | 24214466 | 24214323 | ID=cds.MS.gene60398.t1;Parent=MS.gene60398.t1 |
| chr8.1 | exon | 24213224 | 24213838 | 24213224 | ID=MS.gene60398.t1.exon6;Parent=MS.gene60398.t1 |
| chr8.1 | CDS | 24213224 | 24213838 | 24213224 | ID=cds.MS.gene60398.t1;Parent=MS.gene60398.t1 |
| Gene Sequence |
| Protein sequence |
