Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60396.t1 | XP_003608631.1 | 96.4 | 534 | 19 | 0 | 1 | 534 | 1 | 534 | 4.00E-294 | 1020 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60396.t1 | O49696 | 61.4 | 565 | 156 | 8 | 1 | 519 | 1 | 549 | 1.8e-178 | 627.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60396.t1 | G7JGH5 | 96.4 | 534 | 19 | 0 | 1 | 534 | 1 | 534 | 2.9e-294 | 1020.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059674 | MS.gene60396 | PPI |
| MS.gene46347 | MS.gene60396 | PPI |
| MS.gene011649 | MS.gene60396 | PPI |
| MS.gene60396 | MS.gene015314 | PPI |
| MS.gene60396 | MS.gene09658 | PPI |
| MS.gene60398 | MS.gene60396 | PPI |
| MS.gene058007 | MS.gene60396 | PPI |
| MS.gene015314 | MS.gene60396 | PPI |
| MS.gene011647 | MS.gene60396 | PPI |
| MS.gene60396 | MS.gene21471 | PPI |
| MS.gene019141 | MS.gene60396 | PPI |
| MS.gene60396 | MS.gene46346 | PPI |
| MS.gene011648 | MS.gene60396 | PPI |
| MS.gene058006 | MS.gene60396 | PPI |
| MS.gene60397 | MS.gene60396 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60396.t1 | MTR_4g098610 | 96.442 | 534 | 19 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1071 |
| MS.gene60396.t1 | MTR_4g098570 | 90.449 | 534 | 51 | 0 | 1 | 534 | 1 | 534 | 0.0 | 965 |
| MS.gene60396.t1 | MTR_5g014310 | 72.595 | 551 | 128 | 7 | 1 | 532 | 1 | 547 | 0.0 | 776 |
| MS.gene60396.t1 | MTR_1g115140 | 57.249 | 538 | 216 | 4 | 9 | 534 | 1 | 536 | 0.0 | 630 |
| MS.gene60396.t1 | MTR_1g115175 | 59.662 | 533 | 196 | 6 | 16 | 534 | 5 | 532 | 0.0 | 623 |
| MS.gene60396.t1 | MTR_1g115190 | 58.161 | 533 | 205 | 5 | 16 | 533 | 6 | 535 | 0.0 | 600 |
| MS.gene60396.t1 | MTR_1g077670 | 35.258 | 485 | 251 | 7 | 25 | 504 | 23 | 449 | 2.82e-96 | 301 |
| MS.gene60396.t1 | MTR_1g077660 | 38.320 | 381 | 223 | 3 | 25 | 399 | 17 | 391 | 3.50e-90 | 285 |
| MS.gene60396.t1 | MTR_4g051575 | 41.292 | 356 | 198 | 3 | 34 | 381 | 19 | 371 | 3.64e-88 | 280 |
| MS.gene60396.t1 | MTR_8g104110 | 32.331 | 532 | 310 | 9 | 11 | 505 | 37 | 555 | 4.47e-85 | 275 |
| MS.gene60396.t1 | MTR_7g106260 | 41.813 | 342 | 193 | 3 | 49 | 389 | 42 | 378 | 6.38e-82 | 263 |
| MS.gene60396.t1 | MTR_2g087288 | 35.941 | 409 | 243 | 7 | 49 | 446 | 37 | 437 | 1.62e-81 | 261 |
| MS.gene60396.t1 | MTR_6g084680 | 32.707 | 532 | 300 | 9 | 15 | 505 | 62 | 576 | 3.02e-81 | 265 |
| MS.gene60396.t1 | MTR_7g094770 | 38.372 | 344 | 195 | 5 | 54 | 389 | 61 | 395 | 4.48e-77 | 249 |
| MS.gene60396.t1 | MTR_1g111250 | 33.403 | 476 | 294 | 8 | 48 | 505 | 73 | 543 | 5.03e-76 | 250 |
| MS.gene60396.t1 | MTR_8g104130 | 33.806 | 494 | 281 | 9 | 49 | 505 | 59 | 543 | 1.81e-75 | 249 |
| MS.gene60396.t1 | MTR_0710s0020 | 66.480 | 179 | 59 | 1 | 16 | 194 | 6 | 183 | 4.13e-75 | 236 |
| MS.gene60396.t1 | MTR_2g087285 | 38.081 | 344 | 209 | 3 | 49 | 391 | 37 | 377 | 2.92e-73 | 240 |
| MS.gene60396.t1 | MTR_8g104120 | 30.939 | 543 | 319 | 11 | 4 | 505 | 26 | 553 | 1.44e-71 | 239 |
| MS.gene60396.t1 | MTR_4g051575 | 39.831 | 236 | 137 | 3 | 148 | 381 | 5 | 237 | 2.39e-49 | 173 |
| MS.gene60396.t1 | MTR_1g110380 | 39.216 | 102 | 38 | 2 | 126 | 227 | 6 | 83 | 3.21e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60396.t1 | AT4G17970 | 61.593 | 565 | 155 | 9 | 1 | 519 | 1 | 549 | 0.0 | 664 |
| MS.gene60396.t1 | AT5G46610 | 58.899 | 545 | 188 | 8 | 1 | 519 | 1 | 535 | 0.0 | 615 |
| MS.gene60396.t1 | AT5G46600 | 57.582 | 521 | 178 | 8 | 19 | 506 | 16 | 526 | 0.0 | 589 |
| MS.gene60396.t1 | AT5G46610 | 55.413 | 545 | 183 | 9 | 1 | 519 | 1 | 511 | 0.0 | 560 |
| MS.gene60396.t1 | AT5G46610 | 52.661 | 545 | 175 | 9 | 1 | 519 | 1 | 488 | 0.0 | 518 |
| MS.gene60396.t1 | AT4G00910 | 35.400 | 500 | 266 | 9 | 10 | 505 | 21 | 467 | 1.15e-98 | 307 |
| MS.gene60396.t1 | AT1G08440 | 40.698 | 344 | 199 | 3 | 49 | 389 | 13 | 354 | 5.20e-85 | 272 |
| MS.gene60396.t1 | AT1G08430 | 38.905 | 347 | 204 | 4 | 49 | 389 | 13 | 357 | 1.02e-78 | 256 |
| MS.gene60396.t1 | AT3G11680 | 39.050 | 379 | 220 | 4 | 17 | 389 | 2 | 375 | 5.66e-76 | 248 |
| MS.gene60396.t1 | AT3G11680 | 39.510 | 367 | 208 | 4 | 32 | 389 | 12 | 373 | 5.79e-76 | 248 |
| MS.gene60396.t1 | AT3G18440 | 32.400 | 500 | 298 | 10 | 43 | 505 | 73 | 569 | 1.96e-75 | 250 |
| MS.gene60396.t1 | AT1G18420 | 32.143 | 504 | 292 | 10 | 46 | 505 | 80 | 577 | 3.40e-75 | 249 |
| MS.gene60396.t1 | AT1G18420 | 32.000 | 500 | 290 | 10 | 50 | 505 | 1 | 494 | 1.18e-73 | 243 |
| MS.gene60396.t1 | AT2G27240 | 38.081 | 344 | 208 | 3 | 49 | 389 | 13 | 354 | 3.63e-72 | 238 |
| MS.gene60396.t1 | AT2G27240 | 36.043 | 369 | 207 | 4 | 49 | 389 | 13 | 380 | 6.84e-70 | 233 |
| MS.gene60396.t1 | AT2G17470 | 31.753 | 485 | 297 | 12 | 49 | 505 | 31 | 509 | 3.70e-67 | 226 |
| MS.gene60396.t1 | AT2G17470 | 31.753 | 485 | 297 | 12 | 49 | 505 | 53 | 531 | 7.85e-67 | 226 |
| MS.gene60396.t1 | AT1G68600 | 30.263 | 532 | 324 | 16 | 12 | 505 | 7 | 529 | 1.31e-65 | 222 |
| MS.gene60396.t1 | AT1G25480 | 30.943 | 488 | 303 | 10 | 48 | 505 | 58 | 541 | 3.66e-62 | 213 |
| MS.gene60396.t1 | AT4G17585 | 46.825 | 126 | 62 | 2 | 17 | 141 | 11 | 132 | 9.10e-23 | 95.1 |
Find 115 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTGGAGCCACTCTTTAA+AGG | 0.199252 | 8.1:-24180356 | MS.gene60396:CDS |
| AGATTATCGGAGAGAATTTC+TGG | 0.215757 | 8.1:+24177801 | None:intergenic |
| CTGTTCAGCTGATACACTTT+TGG | 0.231447 | 8.1:+24177608 | None:intergenic |
| CAAAGGTTATAAAGCAGTTT+TGG | 0.231701 | 8.1:-24179184 | MS.gene60396:CDS |
| TCGTAATTCTTCTTTATATA+GGG | 0.249245 | 8.1:+24179582 | None:intergenic |
| AGATCTTCCCCTGACCAATT+TGG | 0.256707 | 8.1:+24179411 | None:intergenic |
| TCTAGGCCATCATGAACTTT+AGG | 0.261202 | 8.1:+24180575 | None:intergenic |
| AATGGAGAAATTGAAGATTC+TGG | 0.270471 | 8.1:-24179237 | MS.gene60396:CDS |
| GGATTGGCGAGAATGCTATT+TGG | 0.281542 | 8.1:-24180334 | MS.gene60396:CDS |
| TTACATACCTTCTATAGATT+TGG | 0.283097 | 8.1:+24179353 | None:intergenic |
| ATTCTTCAGCTTTGTTAGAT+TGG | 0.285201 | 8.1:-24177635 | MS.gene60396:CDS |
| TGTGGAAACTGTGGCGAAAC+TGG | 0.305124 | 8.1:-24177466 | MS.gene60396:CDS |
| CAATGCTTCACGAAGATTAT+CGG | 0.311198 | 8.1:+24177788 | None:intergenic |
| AATGCATGGATCACCCTTCT+TGG | 0.318870 | 8.1:+24180419 | None:intergenic |
| TCCTAGGTATAGCCATTTCT+AGG | 0.327354 | 8.1:+24180558 | None:intergenic |
| ATCGTAATTCTTCTTTATAT+AGG | 0.334565 | 8.1:+24179581 | None:intergenic |
| GTCTCTTAGTATTTCCAAAT+TGG | 0.335490 | 8.1:-24179425 | MS.gene60396:CDS |
| ATAAAGAAGAATTACGATTA+TGG | 0.345300 | 8.1:-24179576 | MS.gene60396:CDS |
| GAACTGTTCTTCGCCAATTC+GGG | 0.355284 | 8.1:-24178644 | MS.gene60396:CDS |
| AAAGGTTTCCGTGTTTAGTT+TGG | 0.365423 | 8.1:-24180472 | MS.gene60396:CDS |
| TCCACAGCTTTCAAACTTGA+AGG | 0.368733 | 8.1:-24179381 | MS.gene60396:CDS |
| TGTTGGAGCCACTCTTTAAA+GGG | 0.374070 | 8.1:-24180355 | MS.gene60396:CDS |
| TTAGTATTTCCAAATTGGTC+AGG | 0.376995 | 8.1:-24179420 | MS.gene60396:CDS |
| GATTGGCGAGAATGCTATTT+GGG | 0.389656 | 8.1:-24180333 | MS.gene60396:CDS |
| GATTATGTTGCAAATGAATC+TGG | 0.397818 | 8.1:-24179930 | MS.gene60396:CDS |
| GGAACTGTTCTTCGCCAATT+CGG | 0.400591 | 8.1:-24178645 | MS.gene60396:CDS |
| GTTGTTAGCTTGGATGTCAT+TGG | 0.409141 | 8.1:+24177716 | None:intergenic |
| CTTACGTTCTTGTAGTTGTT+CGG | 0.413521 | 8.1:+24177575 | None:intergenic |
| AAAGGGCTGAATAGAGGATT+GGG | 0.415501 | 8.1:-24179987 | MS.gene60396:CDS |
| CTACCACTGTATACCCGAAT+TGG | 0.422330 | 8.1:+24178631 | None:intergenic |
| TCACAGCCACGACTCTTCTT+AGG | 0.430174 | 8.1:-24177741 | MS.gene60396:CDS |
| TTATGCAAGGGTCCTTGAAC+AGG | 0.434838 | 8.1:+24177895 | None:intergenic |
| GACAACCATTTCCCTTCTCA+TGG | 0.438588 | 8.1:-24177333 | MS.gene60396:CDS |
| GGCCTAGCCAAATCTATAGA+AGG | 0.440228 | 8.1:-24179360 | MS.gene60396:intron |
| CTCCTCCATGAGAAGGGAAA+TGG | 0.440503 | 8.1:+24177328 | None:intergenic |
| TGCAGGCATTACATGGAAGT+TGG | 0.441399 | 8.1:-24178725 | MS.gene60396:intron |
| GAGCCACTCTTTAAAGGGAT+TGG | 0.444594 | 8.1:-24180350 | MS.gene60396:CDS |
| ATCTGTTCGAGTCCTGTTCA+AGG | 0.456363 | 8.1:-24177907 | MS.gene60396:CDS |
| AGTTCATGATGGCCTAGAAA+TGG | 0.462800 | 8.1:-24180570 | MS.gene60396:CDS |
| ATGCATGGATCACCCTTCTT+GGG | 0.463027 | 8.1:+24180420 | None:intergenic |
| CTGCAATGAAAACAGCTTGA+AGG | 0.467393 | 8.1:+24179901 | None:intergenic |
| ATCTAACAAAGCTGAAGAAT+CGG | 0.473243 | 8.1:+24177638 | None:intergenic |
| CAAAGGGCTGAATAGAGGAT+TGG | 0.475828 | 8.1:-24179988 | MS.gene60396:CDS |
| TTATGCAAAGGGCTGAATAG+AGG | 0.477408 | 8.1:-24179993 | MS.gene60396:CDS |
| GTGATCCATGCATTCAAAGT+TGG | 0.477949 | 8.1:-24180410 | MS.gene60396:CDS |
| TGTCAACAGTATGTAAAAGT+TGG | 0.487010 | 8.1:-24178666 | MS.gene60396:CDS |
| GCCACCATAGCTTCCTCTCA+TGG | 0.496583 | 8.1:-24177687 | MS.gene60396:CDS |
| AACAGGACTCGAACAGATCT+CGG | 0.497650 | 8.1:+24177912 | None:intergenic |
| ATACTAAGAGACTCATGAAA+AGG | 0.499715 | 8.1:+24179436 | None:intergenic |
| GCAGGCATTACATGGAAGTT+GGG | 0.503722 | 8.1:-24178724 | MS.gene60396:intron |
| AATGAAGCAAAAGCAGCAAA+AGG | 0.504471 | 8.1:+24177492 | None:intergenic |
| TACGTTTCTTCCATTTCTCA+AGG | 0.504702 | 8.1:+24180519 | None:intergenic |
| GGATTGGGGACATTATTAGC+AGG | 0.506171 | 8.1:-24179972 | MS.gene60396:CDS |
| GCCTTCAAGTTTGAAAGCTG+TGG | 0.506523 | 8.1:+24179380 | None:intergenic |
| GTTTAGTTTGGAAGACTACA+TGG | 0.510665 | 8.1:-24180460 | MS.gene60396:CDS |
| TACATGGAAGTTGGGAGCCA+AGG | 0.512610 | 8.1:-24178716 | MS.gene60396:CDS |
| TGACAGTACCTAAAATGCCT+TGG | 0.520588 | 8.1:+24178699 | None:intergenic |
| ATAAACCAACTTTGAATGCA+TGG | 0.520687 | 8.1:+24180405 | None:intergenic |
| TGAACTGTGCAGGCATTACA+TGG | 0.522777 | 8.1:-24178732 | MS.gene60396:intron |
| TTGTCCAACACATCAACTCT+TGG | 0.524411 | 8.1:+24177351 | None:intergenic |
| TAGTATTTCCAAATTGGTCA+GGG | 0.525758 | 8.1:-24179419 | MS.gene60396:CDS |
| AATGGCACAGCCAATGGCTA+TGG | 0.528827 | 8.1:+24179461 | None:intergenic |
| GTTGATGAAGTTGAAGAACT+TGG | 0.529466 | 8.1:-24177435 | MS.gene60396:CDS |
| TGGCGAGCATGTTGTTAGCT+TGG | 0.536847 | 8.1:+24177706 | None:intergenic |
| CGCTTCTATACCATAGCCAT+TGG | 0.538092 | 8.1:-24179471 | MS.gene60396:CDS |
| CTCAATCTCCTCCATGAGAA+GGG | 0.539709 | 8.1:+24177322 | None:intergenic |
| AAGGCAAATGGCACAGCCAA+TGG | 0.540672 | 8.1:+24179455 | None:intergenic |
| TCTGCTGCTAGTCTTATGCA+AGG | 0.540766 | 8.1:+24177882 | None:intergenic |
| AGTTGATAATGTCGTGAAGA+TGG | 0.541232 | 8.1:-24179502 | MS.gene60396:CDS |
| GCTTACCAATGTTTCATCAG+TGG | 0.542200 | 8.1:+24179152 | None:intergenic |
| AAAATCCACTGATGAAACAT+TGG | 0.545294 | 8.1:-24179157 | MS.gene60396:intron |
| GAGACTCATGAAAAGGCAAA+TGG | 0.547631 | 8.1:+24179443 | None:intergenic |
| TGGGACATGATGACCCAAGA+AGG | 0.548075 | 8.1:-24180433 | MS.gene60396:CDS |
| AGTTGAAGAACTTGGTCGGT+TGG | 0.550930 | 8.1:-24177427 | MS.gene60396:CDS |
| CAGGGGCAACTTTATGCAAA+GGG | 0.551257 | 8.1:-24180004 | MS.gene60396:CDS |
| GATCTGCAGCCACATATATG+AGG | 0.555277 | 8.1:-24179611 | MS.gene60396:CDS |
| ACTCAATCTCCTCCATGAGA+AGG | 0.555510 | 8.1:+24177321 | None:intergenic |
| TTGTTTGAGAACAGAAATCC+AGG | 0.562615 | 8.1:-24178598 | MS.gene60396:intron |
| TATACAGTGGTAGCTCTACA+TGG | 0.568140 | 8.1:-24178621 | MS.gene60396:CDS |
| GCAGGGGCAACTTTATGCAA+AGG | 0.574504 | 8.1:-24180005 | MS.gene60396:intron |
| CTTTCCATGAGAGGAAGCTA+TGG | 0.576616 | 8.1:+24177683 | None:intergenic |
| TGTATCAGCTGAACAGACAA+TGG | 0.578408 | 8.1:-24177601 | MS.gene60396:CDS |
| GCAAAAGCAGCAAAAGGCAA+TGG | 0.580036 | 8.1:+24177498 | None:intergenic |
| GAGTGAGCTCTTTCCATGAG+AGG | 0.581421 | 8.1:+24177674 | None:intergenic |
| GGGAATGAACCTCATATATG+TGG | 0.581767 | 8.1:+24179602 | None:intergenic |
| ATGATTCCTAAAGTTCATGA+TGG | 0.582610 | 8.1:-24180581 | MS.gene60396:CDS |
| GCCTAGAAATGGCTATACCT+AGG | 0.588780 | 8.1:-24180559 | MS.gene60396:CDS |
| AGAGAATTTCTGGTGAGCAA+TGG | 0.596330 | 8.1:+24177811 | None:intergenic |
| TCGCCAATCCCTTTAAAGAG+TGG | 0.596561 | 8.1:+24180347 | None:intergenic |
| GATTGGGGACATTATTAGCA+GGG | 0.597708 | 8.1:-24179971 | MS.gene60396:CDS |
| TACCTTCTATAGATTTGGCT+AGG | 0.600939 | 8.1:+24179358 | None:intergenic |
| TTCATTGCTTGTGGAAACTG+TGG | 0.606323 | 8.1:-24177475 | MS.gene60396:CDS |
| AGTTTGGAAGACTACATGGA+AGG | 0.606777 | 8.1:-24180456 | MS.gene60396:CDS |
| TGGAAGACTACATGGAAGGT+GGG | 0.611396 | 8.1:-24180452 | MS.gene60396:CDS |
| TTGGAAGACTACATGGAAGG+TGG | 0.614695 | 8.1:-24180453 | MS.gene60396:CDS |
| CTGCTGCTAGTCTTATGCAA+GGG | 0.615929 | 8.1:+24177883 | None:intergenic |
| GGGACATGATGACCCAAGAA+GGG | 0.622433 | 8.1:-24180432 | MS.gene60396:CDS |
| TCCATGAGAGGAAGCTATGG+TGG | 0.626566 | 8.1:+24177686 | None:intergenic |
| TGTGATGATTCAATATACAA+AGG | 0.645562 | 8.1:-24179201 | MS.gene60396:CDS |
| AACCATTTCCCTTCTCATGG+AGG | 0.646179 | 8.1:-24177330 | MS.gene60396:CDS |
| AGTATTTCCAAATTGGTCAG+GGG | 0.650407 | 8.1:-24179418 | MS.gene60396:CDS |
| GAAACCAAGAGTTGATGTGT+TGG | 0.651294 | 8.1:-24177355 | MS.gene60396:CDS |
| TTGGAGCCTAAGAAGAGTCG+TGG | 0.653969 | 8.1:+24177735 | None:intergenic |
| TTGCATAAGACTAGCAGCAG+AGG | 0.655213 | 8.1:-24177880 | MS.gene60396:CDS |
| TCTTCACGACATTATCAACT+CGG | 0.657801 | 8.1:+24179505 | None:intergenic |
| GAAGAATTACGATTATGGTG+TGG | 0.658310 | 8.1:-24179571 | MS.gene60396:CDS |
| ATGAAGTTGAAGAACTTGGT+CGG | 0.662391 | 8.1:-24177431 | MS.gene60396:CDS |
| GTGGTGTTCGAATTCACCGC+AGG | 0.662552 | 8.1:-24180293 | MS.gene60396:intron |
| TCGCCAATTCGGGTATACAG+TGG | 0.664124 | 8.1:-24178634 | MS.gene60396:CDS |
| GAATTCGAACACCACGACGA+CGG | 0.674271 | 8.1:+24180301 | None:intergenic |
| AAGGGCTGAATAGAGGATTG+GGG | 0.679447 | 8.1:-24179986 | MS.gene60396:CDS |
| GGCTGTCATGACCGTCGTCG+TGG | 0.681791 | 8.1:-24180312 | MS.gene60396:CDS |
| CAATGGCTATGGTATAGAAG+CGG | 0.684555 | 8.1:+24179472 | None:intergenic |
| GTAGTCTTCCAAACTAAACA+CGG | 0.700142 | 8.1:+24180464 | None:intergenic |
| TGTTTCAAAGAGTATAGACA+TGG | 0.707293 | 8.1:-24177402 | MS.gene60396:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTTAATTATTAT+TGG | - | chr8.1:24179056-24179075 | MS.gene60396:intron | 0.0% |
| !!! | AATTATTCATAAATCTTTTT+TGG | - | chr8.1:24178849-24178868 | MS.gene60396:intron | 10.0% |
| !!! | TGAGATAAAAAAAATTATTT+TGG | + | chr8.1:24178256-24178275 | None:intergenic | 10.0% |
| !!! | TTAATTTTTGAAATCATTAT+TGG | + | chr8.1:24179705-24179724 | None:intergenic | 10.0% |
| !! | AATTTCAAAAGCTAATTTAT+GGG | + | chr8.1:24179481-24179500 | None:intergenic | 15.0% |
| !! | CACAAAATTGTATATTTATA+TGG | - | chr8.1:24178164-24178183 | MS.gene60396:intron | 15.0% |
| !!! | ATCTTAAAATTTGAATTTTG+AGG | + | chr8.1:24179510-24179529 | None:intergenic | 15.0% |
| !!! | TATAACAACATTTTATTGTA+CGG | - | chr8.1:24178609-24178628 | MS.gene60396:CDS | 15.0% |
| !!! | TCAAAATTCAAATTTTAAGA+TGG | - | chr8.1:24179509-24179528 | MS.gene60396:CDS | 15.0% |
| !!! | TCTATCATAATTTTAAATTG+CGG | + | chr8.1:24177803-24177822 | None:intergenic | 15.0% |
| !! | ATAAAGAAGAATTACGATTA+TGG | - | chr8.1:24178328-24178347 | MS.gene60396:intron | 20.0% |
| !! | ATAGATAGATAGATAGTATA+AGG | - | chr8.1:24177841-24177860 | MS.gene60396:CDS | 20.0% |
| !! | ATCGTAATTCTTCTTTATAT+AGG | + | chr8.1:24178326-24178345 | None:intergenic | 20.0% |
| !! | ATTTCAAAAGCTAATTTATG+GGG | + | chr8.1:24179480-24179499 | None:intergenic | 20.0% |
| !! | GAATTTCAAAAGCTAATTTA+TGG | + | chr8.1:24179482-24179501 | None:intergenic | 20.0% |
| !! | TCGTAATTCTTCTTTATATA+GGG | + | chr8.1:24178325-24178344 | None:intergenic | 20.0% |
| !!! | ATATTTAAAGTGGTTGAATA+TGG | + | chr8.1:24179042-24179061 | None:intergenic | 20.0% |
| !!! | TAATTACAATTTTACTCATC+TGG | + | chr8.1:24180366-24180385 | None:intergenic | 20.0% |
| !!! | TAATTTGTAATCTCTTTTGA+TGG | - | chr8.1:24177877-24177896 | MS.gene60396:CDS | 20.0% |
| !!! | TGTATTTTTCTACAATATCA+AGG | + | chr8.1:24177689-24177708 | None:intergenic | 20.0% |
| ! | AGATAGATAGTATAAGGTTA+AGG | - | chr8.1:24177847-24177866 | MS.gene60396:CDS | 25.0% |
| ! | AGTTTCTAACTAAACTCAAA+TGG | - | chr8.1:24177642-24177661 | MS.gene60396:CDS | 25.0% |
| ! | ATCAGTTGTTAATTAGCATA+GGG | - | chr8.1:24178905-24178924 | MS.gene60396:intron | 25.0% |
| ! | ATGAATCAAAACAAGATGAA+TGG | + | chr8.1:24178777-24178796 | None:intergenic | 25.0% |
| ! | CAAAATAGTGGTTATATCAT+AGG | - | chr8.1:24179440-24179459 | MS.gene60396:CDS | 25.0% |
| ! | GAATTACTTCTTAAAATACC+AGG | + | chr8.1:24178222-24178241 | None:intergenic | 25.0% |
| ! | GTTCAAAACAAAACGATTTA+AGG | + | chr8.1:24179157-24179176 | None:intergenic | 25.0% |
| ! | TGTGATGATTCAATATACAA+AGG | - | chr8.1:24178703-24178722 | MS.gene60396:CDS | 25.0% |
| ! | TGTGATGTTGAAATAACATT+AGG | + | chr8.1:24178058-24178077 | None:intergenic | 25.0% |
| ! | TTACATACCTTCTATAGATT+TGG | + | chr8.1:24178554-24178573 | None:intergenic | 25.0% |
| ! | TTATAGTTGCTTATAGTTGA+AGG | - | chr8.1:24177735-24177754 | MS.gene60396:CDS | 25.0% |
| ! | TTTACAACACATAGTTTCAA+AGG | - | chr8.1:24178576-24178595 | MS.gene60396:intron | 25.0% |
| ! | TTTATCTCAATTGTTGTGTT+TGG | - | chr8.1:24178267-24178286 | MS.gene60396:intron | 25.0% |
| ! | TTTCAAAAGCTAATTTATGG+GGG | + | chr8.1:24179479-24179498 | None:intergenic | 25.0% |
| !! | AATTTAGAATTGCTTGACTT+AGG | + | chr8.1:24178833-24178852 | None:intergenic | 25.0% |
| !! | ATTTAGAATTGCTTGACTTA+GGG | + | chr8.1:24178832-24178851 | None:intergenic | 25.0% |
| !!! | AATTATTTTGGTTACAGTTG+AGG | + | chr8.1:24178244-24178263 | None:intergenic | 25.0% |
| !!! | TGTGTCAGTGAATATTTTAA+TGG | - | chr8.1:24178649-24178668 | MS.gene60396:CDS | 25.0% |
| AAAATCCACTGATGAAACAT+TGG | - | chr8.1:24178747-24178766 | MS.gene60396:intron | 30.0% | |
| AATCACAAAACAGACATATG+TGG | - | chr8.1:24179016-24179035 | MS.gene60396:intron | 30.0% | |
| AATGGAGAAATTGAAGATTC+TGG | - | chr8.1:24178667-24178686 | MS.gene60396:CDS | 30.0% | |
| ACCAAACATGCATTTATTCT+GGG | - | chr8.1:24179777-24179796 | MS.gene60396:intron | 30.0% | |
| AGAACGAGAATTAGTCAATT+AGG | + | chr8.1:24179927-24179946 | None:intergenic | 30.0% | |
| ATAAACCAACTTTGAATGCA+TGG | + | chr8.1:24177502-24177521 | None:intergenic | 30.0% | |
| ATAACTACATGTGTCAGTAT+TGG | - | chr8.1:24179735-24179754 | MS.gene60396:intron | 30.0% | |
| ATACTAAGAGACTCATGAAA+AGG | + | chr8.1:24178471-24178490 | None:intergenic | 30.0% | |
| ATAGTGGTTATATCATAGGT+TGG | - | chr8.1:24179444-24179463 | MS.gene60396:CDS | 30.0% | |
| ATCTAACAAAGCTGAAGAAT+CGG | + | chr8.1:24180269-24180288 | None:intergenic | 30.0% | |
| ATCTCCAACAGAGAATATAA+AGG | + | chr8.1:24179406-24179425 | None:intergenic | 30.0% | |
| ATGATTCCTAAAGTTCATGA+TGG | - | chr8.1:24177323-24177342 | MS.gene60396:CDS | 30.0% | |
| CATCAGTTGTTAATTAGCAT+AGG | - | chr8.1:24178904-24178923 | MS.gene60396:intron | 30.0% | |
| GAACGAGAATTAGTCAATTA+GGG | + | chr8.1:24179926-24179945 | None:intergenic | 30.0% | |
| GATTATGTTGCAAATGAATC+TGG | - | chr8.1:24177974-24177993 | MS.gene60396:intron | 30.0% | |
| GTCTCTTAGTATTTCCAAAT+TGG | - | chr8.1:24178479-24178498 | MS.gene60396:intron | 30.0% | |
| GTTACCTTTATATTCTCTGT+TGG | - | chr8.1:24179399-24179418 | MS.gene60396:CDS | 30.0% | |
| TAGAAACTGATATATACCTG+CGG | + | chr8.1:24177630-24177649 | None:intergenic | 30.0% | |
| TAGTATTTCCAAATTGGTCA+GGG | - | chr8.1:24178485-24178504 | MS.gene60396:intron | 30.0% | |
| TGTCAACAGTATGTAAAAGT+TGG | - | chr8.1:24179238-24179257 | MS.gene60396:CDS | 30.0% | |
| TGTTGTCAAAATATCATTCC+TGG | - | chr8.1:24178201-24178220 | MS.gene60396:intron | 30.0% | |
| TTAGTATTTCCAAATTGGTC+AGG | - | chr8.1:24178484-24178503 | MS.gene60396:intron | 30.0% | |
| TTCAAAAGCTAATTTATGGG+GGG | + | chr8.1:24179478-24179497 | None:intergenic | 30.0% | |
| TTTCAAAACCTTTGATGTTG+CGG | - | chr8.1:24177758-24177777 | MS.gene60396:CDS | 30.0% | |
| ! | AAGAAACGTATGCATGTTTT+TGG | - | chr8.1:24177398-24177417 | MS.gene60396:CDS | 30.0% |
| ! | ACTTTTACATACTGTTGACA+TGG | + | chr8.1:24179238-24179257 | None:intergenic | 30.0% |
| ! | CAAAGGTTATAAAGCAGTTT+TGG | - | chr8.1:24178720-24178739 | MS.gene60396:CDS | 30.0% |
| ! | GCAGTTGCAGTTTTTATAAT+AGG | - | chr8.1:24178022-24178041 | MS.gene60396:intron | 30.0% |
| ! | TGTTTCAAAGAGTATAGACA+TGG | - | chr8.1:24180502-24180521 | MS.gene60396:CDS | 30.0% |
| !! | ATTCTTCAGCTTTGTTAGAT+TGG | - | chr8.1:24180269-24180288 | MS.gene60396:intron | 30.0% |
| !! | ATTTTGACAACATATGTCGT+CGG | + | chr8.1:24178193-24178212 | None:intergenic | 30.0% |
| !! | GTGAAATTTAGACTAGTCTT+AGG | + | chr8.1:24179581-24179600 | None:intergenic | 30.0% |
| !!! | CACTATTTTGACTAGACATA+GGG | + | chr8.1:24179430-24179449 | None:intergenic | 30.0% |
| !!! | TGTATCATTGCTTTTTCTGT+TGG | - | chr8.1:24177532-24177551 | MS.gene60396:CDS | 30.0% |
| !!! | TTCTGGGTTTTTTGAAGTAT+CGG | - | chr8.1:24179793-24179812 | MS.gene60396:intron | 30.0% |
| AAAGGTTTCCGTGTTTAGTT+TGG | - | chr8.1:24177432-24177451 | MS.gene60396:CDS | 35.0% | |
| AAATACCTCCTTGCATAAAG+TGG | - | chr8.1:24179606-24179625 | MS.gene60396:CDS | 35.0% | |
| AACCCCTAAGCTAATTCATA+GGG | + | chr8.1:24179836-24179855 | None:intergenic | 35.0% | |
| AATGAAGCAAAAGCAGCAAA+AGG | + | chr8.1:24180415-24180434 | None:intergenic | 35.0% | |
| ACCCAGAATAAATGCATGTT+TGG | + | chr8.1:24179781-24179800 | None:intergenic | 35.0% | |
| AGATTATCGGAGAGAATTTC+TGG | + | chr8.1:24180106-24180125 | None:intergenic | 35.0% | |
| AGCATCTCAACATTTGATGA+AGG | - | chr8.1:24179371-24179390 | MS.gene60396:CDS | 35.0% | |
| AGTATTTCCAAATTGGTCAG+GGG | - | chr8.1:24178486-24178505 | MS.gene60396:intron | 35.0% | |
| ATCAACACTTTGGATGAAAG+AGG | - | chr8.1:24178959-24178978 | MS.gene60396:intron | 35.0% | |
| ATGAAGTTGAAGAACTTGGT+CGG | - | chr8.1:24180473-24180492 | MS.gene60396:CDS | 35.0% | |
| CAATGCTTCACGAAGATTAT+CGG | + | chr8.1:24180119-24180138 | None:intergenic | 35.0% | |
| CACCAAACATGCATTTATTC+TGG | - | chr8.1:24179776-24179795 | MS.gene60396:intron | 35.0% | |
| CCTATGTCTAGTCAAAATAG+TGG | - | chr8.1:24179428-24179447 | MS.gene60396:CDS | 35.0% | |
| CTTACGTTCTTGTAGTTGTT+CGG | + | chr8.1:24180332-24180351 | None:intergenic | 35.0% | |
| GAAGAATTACGATTATGGTG+TGG | - | chr8.1:24178333-24178352 | MS.gene60396:intron | 35.0% | |
| GTAGTCTTCCAAACTAAACA+CGG | + | chr8.1:24177443-24177462 | None:intergenic | 35.0% | |
| GTGACAAAAACCTTGAGAAA+TGG | - | chr8.1:24177375-24177394 | MS.gene60396:CDS | 35.0% | |
| TACCTTCTATAGATTTGGCT+AGG | + | chr8.1:24178549-24178568 | None:intergenic | 35.0% | |
| TACGTTTCTTCCATTTCTCA+AGG | + | chr8.1:24177388-24177407 | None:intergenic | 35.0% | |
| TATGTGTAGCATCAACACTT+TGG | - | chr8.1:24178949-24178968 | MS.gene60396:intron | 35.0% | |
| TCTCAATTGTTGTGTTTGGA+AGG | - | chr8.1:24178271-24178290 | MS.gene60396:intron | 35.0% | |
| TCTTCACGACATTATCAACT+CGG | + | chr8.1:24178402-24178421 | None:intergenic | 35.0% | |
| TTGTTTGAGAACAGAAATCC+AGG | - | chr8.1:24179306-24179325 | MS.gene60396:intron | 35.0% | |
| ! | ACTAACACTAACAAGAGTAC+TGG | - | chr8.1:24179651-24179670 | MS.gene60396:intron | 35.0% |
| ! | GTTGATGAAGTTGAAGAACT+TGG | - | chr8.1:24180469-24180488 | MS.gene60396:CDS | 35.0% |
| ! | TCACCCTATGAATTAGCTTA+GGG | - | chr8.1:24179830-24179849 | MS.gene60396:intron | 35.0% |
| ! | TGTCTGTTTTGTGATTGTGT+CGG | + | chr8.1:24179012-24179031 | None:intergenic | 35.0% |
| ! | TTCACCCTATGAATTAGCTT+AGG | - | chr8.1:24179829-24179848 | MS.gene60396:intron | 35.0% |
| ! | TTTTTGTCACTCTCATTCCT+AGG | + | chr8.1:24177365-24177384 | None:intergenic | 35.0% |
| !! | ACTTTATGCAAGGAGGTATT+TGG | + | chr8.1:24179607-24179626 | None:intergenic | 35.0% |
| !! | AGTTGATAATGTCGTGAAGA+TGG | - | chr8.1:24178402-24178421 | MS.gene60396:intron | 35.0% |
| !! | GTTTAGTTTGGAAGACTACA+TGG | - | chr8.1:24177444-24177463 | MS.gene60396:CDS | 35.0% |
| !! | TAAGACATTCTTTGAAGCAC+TGG | + | chr8.1:24179132-24179151 | None:intergenic | 35.0% |
| !! | TGTAATCTCTTTTGATGGCA+GGG | - | chr8.1:24177882-24177901 | MS.gene60396:CDS | 35.0% |
| !! | TTGTAATCTCTTTTGATGGC+AGG | - | chr8.1:24177881-24177900 | MS.gene60396:CDS | 35.0% |
| !! | TTTTTGGTGAGAGGCTTAAA+AGG | - | chr8.1:24177414-24177433 | MS.gene60396:CDS | 35.0% |
| !!! | CCACTATTTTGACTAGACAT+AGG | + | chr8.1:24179431-24179450 | None:intergenic | 35.0% |
| !!! | GCGTCTACTTTTTATACTGT+TGG | + | chr8.1:24180074-24180093 | None:intergenic | 35.0% |
| AAAAGCTAATTTATGGGGGG+AGG | + | chr8.1:24179475-24179494 | None:intergenic | 40.0% | |
| AAAGGGCTGAATAGAGGATT+GGG | - | chr8.1:24177917-24177936 | MS.gene60396:CDS | 40.0% | |
| AGTTCATGATGGCCTAGAAA+TGG | - | chr8.1:24177334-24177353 | MS.gene60396:CDS | 40.0% | |
| AGTTTGGAAGACTACATGGA+AGG | - | chr8.1:24177448-24177467 | MS.gene60396:CDS | 40.0% | |
| CAACCCCTAAGCTAATTCAT+AGG | + | chr8.1:24179837-24179856 | None:intergenic | 40.0% | |
| CAATGGCTATGGTATAGAAG+CGG | + | chr8.1:24178435-24178454 | None:intergenic | 40.0% | |
| CATACCTGGTGTAGAAAGTT+AGG | + | chr8.1:24178933-24178952 | None:intergenic | 40.0% | |
| CTGCAATGAAAACAGCTTGA+AGG | + | chr8.1:24178006-24178025 | None:intergenic | 40.0% | |
| GAACTCAACTGTTATGTACC+TGG | + | chr8.1:24179327-24179346 | None:intergenic | 40.0% | |
| GAGACTCATGAAAAGGCAAA+TGG | + | chr8.1:24178464-24178483 | None:intergenic | 40.0% | |
| GATTGGGGACATTATTAGCA+GGG | - | chr8.1:24177933-24177952 | MS.gene60396:intron | 40.0% | |
| GCTTACCAATGTTTCATCAG+TGG | + | chr8.1:24178755-24178774 | None:intergenic | 40.0% | |
| GGGAATGAACCTCATATATG+TGG | + | chr8.1:24178305-24178324 | None:intergenic | 40.0% | |
| GTGATCCATGCATTCAAAGT+TGG | - | chr8.1:24177494-24177513 | MS.gene60396:CDS | 40.0% | |
| TCCACAGCTTTCAAACTTGA+AGG | - | chr8.1:24178523-24178542 | MS.gene60396:intron | 40.0% | |
| TCCTAGGTATAGCCATTTCT+AGG | + | chr8.1:24177349-24177368 | None:intergenic | 40.0% | |
| TCTAGGCCATCATGAACTTT+AGG | + | chr8.1:24177332-24177351 | None:intergenic | 40.0% | |
| TGACAGTACCTAAAATGCCT+TGG | + | chr8.1:24179208-24179227 | None:intergenic | 40.0% | |
| TGTATCAGCTGAACAGACAA+TGG | - | chr8.1:24180303-24180322 | MS.gene60396:CDS | 40.0% | |
| TGTTAGTGTTAGTGCTTCCT+AGG | + | chr8.1:24179644-24179663 | None:intergenic | 40.0% | |
| TGTTGGAGCCACTCTTTAAA+GGG | - | chr8.1:24177549-24177568 | MS.gene60396:CDS | 40.0% | |
| TTATGCAAAGGGCTGAATAG+AGG | - | chr8.1:24177911-24177930 | MS.gene60396:CDS | 40.0% | |
| TTCATTGCTTGTGGAAACTG+TGG | - | chr8.1:24180429-24180448 | MS.gene60396:CDS | 40.0% | |
| TTGTCCAACACATCAACTCT+TGG | + | chr8.1:24180556-24180575 | None:intergenic | 40.0% | |
| ! | CACCCTATGAATTAGCTTAG+GGG | - | chr8.1:24179831-24179850 | MS.gene60396:intron | 40.0% |
| ! | CTGTTCAGCTGATACACTTT+TGG | + | chr8.1:24180299-24180318 | None:intergenic | 40.0% |
| ! | GATTGGCGAGAATGCTATTT+GGG | - | chr8.1:24177571-24177590 | MS.gene60396:CDS | 40.0% |
| ! | GTGATTTTATGGCAGTGTTG+AGG | + | chr8.1:24180147-24180166 | None:intergenic | 40.0% |
| ! | GTTGTTAGCTTGGATGTCAT+TGG | + | chr8.1:24180191-24180210 | None:intergenic | 40.0% |
| ! | TATACAGTGGTAGCTCTACA+TGG | - | chr8.1:24179283-24179302 | MS.gene60396:intron | 40.0% |
| ! | TGCTTTTGCTTCATTGCTTG+TGG | - | chr8.1:24180420-24180439 | MS.gene60396:CDS | 40.0% |
| !! | AGAGAATTTCTGGTGAGCAA+TGG | + | chr8.1:24180096-24180115 | None:intergenic | 40.0% |
| !! | GAAACCAAGAGTTGATGTGT+TGG | - | chr8.1:24180549-24180568 | MS.gene60396:CDS | 40.0% |
| !! | GTAATCTCTTTTGATGGCAG+GGG | - | chr8.1:24177883-24177902 | MS.gene60396:CDS | 40.0% |
| !!! | CGTTTTGTTTTGAACTGTGC+AGG | - | chr8.1:24179162-24179181 | MS.gene60396:CDS | 40.0% |
| !!! | GTATGCATGTTTTTGGTGAG+AGG | - | chr8.1:24177405-24177424 | MS.gene60396:CDS | 40.0% |
| !!! | GTGTCGATTTTTCAGTGTCA+GGG | + | chr8.1:24179683-24179702 | None:intergenic | 40.0% |
| AACAGGACTCGAACAGATCT+CGG | + | chr8.1:24179995-24180014 | None:intergenic | 45.0% | |
| AACCATTTCCCTTCTCATGG+AGG | - | chr8.1:24180574-24180593 | MS.gene60396:CDS | 45.0% | |
| AAGGGCTGAATAGAGGATTG+GGG | - | chr8.1:24177918-24177937 | MS.gene60396:CDS | 45.0% | |
| AATGCATGGATCACCCTTCT+TGG | + | chr8.1:24177488-24177507 | None:intergenic | 45.0% | |
| AATTGCAGCCGCAACATCAA+AGG | + | chr8.1:24177769-24177788 | None:intergenic | 45.0% | |
| AGATCTTCCCCTGACCAATT+TGG | + | chr8.1:24178496-24178515 | None:intergenic | 45.0% | |
| AGTTGAAGAACTTGGTCGGT+TGG | - | chr8.1:24180477-24180496 | MS.gene60396:CDS | 45.0% | |
| ATCTGTTCGAGTCCTGTTCA+AGG | - | chr8.1:24179997-24180016 | MS.gene60396:CDS | 45.0% | |
| ATGCATGGATCACCCTTCTT+GGG | + | chr8.1:24177487-24177506 | None:intergenic | 45.0% | |
| CAAAGGGCTGAATAGAGGAT+TGG | - | chr8.1:24177916-24177935 | MS.gene60396:CDS | 45.0% | |
| CAGGGGCAACTTTATGCAAA+GGG | - | chr8.1:24177900-24177919 | MS.gene60396:CDS | 45.0% | |
| CGCTTCTATACCATAGCCAT+TGG | - | chr8.1:24178433-24178452 | MS.gene60396:intron | 45.0% | |
| CTACCACTGTATACCCGAAT+TGG | + | chr8.1:24179276-24179295 | None:intergenic | 45.0% | |
| CTGTTGGAGCCACTCTTTAA+AGG | - | chr8.1:24177548-24177567 | MS.gene60396:CDS | 45.0% | |
| CTTTCCATGAGAGGAAGCTA+TGG | + | chr8.1:24180224-24180243 | None:intergenic | 45.0% | |
| GAACTGTTCTTCGCCAATTC+GGG | - | chr8.1:24179260-24179279 | MS.gene60396:CDS | 45.0% | |
| GACAACCATTTCCCTTCTCA+TGG | - | chr8.1:24180571-24180590 | MS.gene60396:CDS | 45.0% | |
| GATCTGCAGCCACATATATG+AGG | - | chr8.1:24178293-24178312 | MS.gene60396:intron | 45.0% | |
| GCAAAAGCAGCAAAAGGCAA+TGG | + | chr8.1:24180409-24180428 | None:intergenic | 45.0% | |
| GCAGGCATTACATGGAAGTT+GGG | - | chr8.1:24179180-24179199 | MS.gene60396:CDS | 45.0% | |
| GCCTAGAAATGGCTATACCT+AGG | - | chr8.1:24177345-24177364 | MS.gene60396:CDS | 45.0% | |
| GGAACTGTTCTTCGCCAATT+CGG | - | chr8.1:24179259-24179278 | MS.gene60396:CDS | 45.0% | |
| GGATTGGGGACATTATTAGC+AGG | - | chr8.1:24177932-24177951 | MS.gene60396:intron | 45.0% | |
| GGCCTAGCCAAATCTATAGA+AGG | - | chr8.1:24178544-24178563 | MS.gene60396:intron | 45.0% | |
| TACCTCCTTGCATAAAGTGG+AGG | - | chr8.1:24179609-24179628 | MS.gene60396:CDS | 45.0% | |
| TGAACTGTGCAGGCATTACA+TGG | - | chr8.1:24179172-24179191 | MS.gene60396:CDS | 45.0% | |
| TGCAGGCATTACATGGAAGT+TGG | - | chr8.1:24179179-24179198 | MS.gene60396:CDS | 45.0% | |
| TGGAAGACTACATGGAAGGT+GGG | - | chr8.1:24177452-24177471 | MS.gene60396:CDS | 45.0% | |
| TGTCGGACACAGACACATAT+CGG | + | chr8.1:24178995-24179014 | None:intergenic | 45.0% | |
| TGTTAGTGCTTCCTAGGTGA+AGG | + | chr8.1:24179638-24179657 | None:intergenic | 45.0% | |
| TTATGCAAGGGTCCTTGAAC+AGG | + | chr8.1:24180012-24180031 | None:intergenic | 45.0% | |
| TTGCATAAGACTAGCAGCAG+AGG | - | chr8.1:24180024-24180043 | MS.gene60396:intron | 45.0% | |
| TTGGAAGACTACATGGAAGG+TGG | - | chr8.1:24177451-24177470 | MS.gene60396:CDS | 45.0% | |
| ! | GAGCCACTCTTTAAAGGGAT+TGG | - | chr8.1:24177554-24177573 | MS.gene60396:CDS | 45.0% |
| ! | GAGTCGTGGCTGTGATTTTA+TGG | + | chr8.1:24180158-24180177 | None:intergenic | 45.0% |
| ! | GCCTTCAAGTTTGAAAGCTG+TGG | + | chr8.1:24178527-24178546 | None:intergenic | 45.0% |
| ! | GGATTGGCGAGAATGCTATT+TGG | - | chr8.1:24177570-24177589 | MS.gene60396:CDS | 45.0% |
| ! | GTGTTGATGCTACACATACC+TGG | + | chr8.1:24178947-24178966 | None:intergenic | 45.0% |
| ! | TCGCCAATCCCTTTAAAGAG+TGG | + | chr8.1:24177560-24177579 | None:intergenic | 45.0% |
| ! | TGATGTTGCGGCTGCAATTT+TGG | - | chr8.1:24177770-24177789 | MS.gene60396:CDS | 45.0% |
| !! | CTGCTGCTAGTCTTATGCAA+GGG | + | chr8.1:24180024-24180043 | None:intergenic | 45.0% |
| !! | CTTTGGATGAAAGAGGTGTC+TGG | - | chr8.1:24178966-24178985 | MS.gene60396:intron | 45.0% |
| !! | TCTGCTGCTAGTCTTATGCA+AGG | + | chr8.1:24180025-24180044 | None:intergenic | 45.0% |
| !! | TTTGAAGCACTGGTGCTTTG+AGG | + | chr8.1:24179122-24179141 | None:intergenic | 45.0% |
| !!! | GGTGTCGATTTTTCAGTGTC+AGG | + | chr8.1:24179684-24179703 | None:intergenic | 45.0% |
| !! | ATAAAATTTATCAAATTAAA+AGG | + | chr8.1:24179963-24179982 | None:intergenic | 5.0% |
| !! | TAATTAAAAAATATTTAAAG+TGG | + | chr8.1:24179052-24179071 | None:intergenic | 5.0% |
| AAGGCAAATGGCACAGCCAA+TGG | + | chr8.1:24178452-24178471 | None:intergenic | 50.0% | |
| AATGGCACAGCCAATGGCTA+TGG | + | chr8.1:24178446-24178465 | None:intergenic | 50.0% | |
| ACACTCAACGCAACTGTACG+TGG | - | chr8.1:24178112-24178131 | MS.gene60396:intron | 50.0% | |
| CTCCTCCATGAGAAGGGAAA+TGG | + | chr8.1:24180579-24180598 | None:intergenic | 50.0% | |
| GAATTCGAACACCACGACGA+CGG | + | chr8.1:24177606-24177625 | None:intergenic | 50.0% | |
| GAGTGAGCTCTTTCCATGAG+AGG | + | chr8.1:24180233-24180252 | None:intergenic | 50.0% | |
| GCAGGGGCAACTTTATGCAA+AGG | - | chr8.1:24177899-24177918 | MS.gene60396:CDS | 50.0% | |
| GCTTGACTTAGGGCACATGT+TGG | + | chr8.1:24178822-24178841 | None:intergenic | 50.0% | |
| GGCACCTAACTTTCTACACC+AGG | - | chr8.1:24178926-24178945 | MS.gene60396:intron | 50.0% | |
| GGGACATGATGACCCAAGAA+GGG | - | chr8.1:24177472-24177491 | MS.gene60396:CDS | 50.0% | |
| TACATGGAAGTTGGGAGCCA+AGG | - | chr8.1:24179188-24179207 | MS.gene60396:CDS | 50.0% | |
| TAGTGCTTCCTAGGTGAAGG+TGG | + | chr8.1:24179635-24179654 | None:intergenic | 50.0% | |
| TCACAGCCACGACTCTTCTT+AGG | - | chr8.1:24180163-24180182 | MS.gene60396:intron | 50.0% | |
| TCCATGAGAGGAAGCTATGG+TGG | + | chr8.1:24180221-24180240 | None:intergenic | 50.0% | |
| TCGCCAATTCGGGTATACAG+TGG | - | chr8.1:24179270-24179289 | MS.gene60396:intron | 50.0% | |
| TGGCGAGCATGTTGTTAGCT+TGG | + | chr8.1:24180201-24180220 | None:intergenic | 50.0% | |
| TGGGACATGATGACCCAAGA+AGG | - | chr8.1:24177471-24177490 | MS.gene60396:CDS | 50.0% | |
| TGTGGAAACTGTGGCGAAAC+TGG | - | chr8.1:24180438-24180457 | MS.gene60396:CDS | 50.0% | |
| TTGGAGCCTAAGAAGAGTCG+TGG | + | chr8.1:24180172-24180191 | None:intergenic | 50.0% | |
| ! | GTTGCGGCTGCAATTTTGGA+CGG | - | chr8.1:24177774-24177793 | MS.gene60396:CDS | 50.0% |
| !! | GTTGGGAGCCAAGGCATTTT+AGG | - | chr8.1:24179197-24179216 | MS.gene60396:CDS | 50.0% |
| !! | GTTTGGTGTCTGAGACGTGT+TGG | + | chr8.1:24179764-24179783 | None:intergenic | 50.0% |
| GCCACCATAGCTTCCTCTCA+TGG | - | chr8.1:24180217-24180236 | MS.gene60396:intron | 55.0% | |
| GGCCTCCACTTTATGCAAGG+AGG | + | chr8.1:24179614-24179633 | None:intergenic | 55.0% | |
| GGTGGCCTCCACTTTATGCA+AGG | + | chr8.1:24179617-24179636 | None:intergenic | 55.0% | |
| GTGGTGTTCGAATTCACCGC+AGG | - | chr8.1:24177611-24177630 | MS.gene60396:CDS | 55.0% | |
| AGTGGAGGCCACCTTCACCT+AGG | - | chr8.1:24179624-24179643 | MS.gene60396:intron | 60.0% | |
| !! | GCACTGGTGCTTTGAGGCAC+TGG | + | chr8.1:24179116-24179135 | None:intergenic | 60.0% |
| GGCTGTCATGACCGTCGTCG+TGG | - | chr8.1:24177592-24177611 | MS.gene60396:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 24177323 | 24180603 | 24177323 | ID=MS.gene60396 |
| chr8.1 | mRNA | 24177323 | 24180603 | 24177323 | ID=MS.gene60396.t1;Parent=MS.gene60396 |
| chr8.1 | exon | 24180294 | 24180603 | 24180294 | ID=MS.gene60396.t1.exon1;Parent=MS.gene60396.t1 |
| chr8.1 | CDS | 24180294 | 24180603 | 24180294 | ID=cds.MS.gene60396.t1;Parent=MS.gene60396.t1 |
| chr8.1 | exon | 24179883 | 24180023 | 24179883 | ID=MS.gene60396.t1.exon2;Parent=MS.gene60396.t1 |
| chr8.1 | CDS | 24179883 | 24180023 | 24179883 | ID=cds.MS.gene60396.t1;Parent=MS.gene60396.t1 |
| chr8.1 | exon | 24179361 | 24179633 | 24179361 | ID=MS.gene60396.t1.exon3;Parent=MS.gene60396.t1 |
| chr8.1 | CDS | 24179361 | 24179633 | 24179361 | ID=cds.MS.gene60396.t1;Parent=MS.gene60396.t1 |
| chr8.1 | exon | 24179158 | 24179279 | 24179158 | ID=MS.gene60396.t1.exon4;Parent=MS.gene60396.t1 |
| chr8.1 | CDS | 24179158 | 24179279 | 24179158 | ID=cds.MS.gene60396.t1;Parent=MS.gene60396.t1 |
| chr8.1 | exon | 24178599 | 24178742 | 24178599 | ID=MS.gene60396.t1.exon5;Parent=MS.gene60396.t1 |
| chr8.1 | CDS | 24178599 | 24178742 | 24178599 | ID=cds.MS.gene60396.t1;Parent=MS.gene60396.t1 |
| chr8.1 | exon | 24177323 | 24177937 | 24177323 | ID=MS.gene60396.t1.exon6;Parent=MS.gene60396.t1 |
| chr8.1 | CDS | 24177323 | 24177937 | 24177323 | ID=cds.MS.gene60396.t1;Parent=MS.gene60396.t1 |
| Gene Sequence |
| Protein sequence |
