Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011649.t1 | XP_003608627.1 | 94 | 534 | 32 | 0 | 1 | 534 | 1 | 534 | 1.60E-282 | 981.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011649.t1 | O49696 | 62.8 | 551 | 142 | 9 | 1 | 506 | 1 | 533 | 3.8e-176 | 619.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011649.t1 | G7JGH1 | 94.0 | 534 | 32 | 0 | 1 | 534 | 1 | 534 | 1.1e-282 | 981.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011649 | MS.gene011648 | PPI |
| MS.gene011649 | MS.gene60396 | PPI |
| MS.gene011649 | MS.gene059674 | PPI |
| MS.gene058007 | MS.gene011649 | PPI |
| MS.gene011649 | MS.gene015314 | PPI |
| MS.gene011647 | MS.gene011649 | PPI |
| MS.gene019141 | MS.gene011649 | PPI |
| MS.gene011649 | MS.gene21471 | PPI |
| MS.gene011649 | MS.gene058006 | PPI |
| MS.gene60397 | MS.gene011649 | PPI |
| MS.gene011649 | MS.gene46346 | PPI |
| MS.gene011648 | MS.gene011649 | PPI |
| MS.gene011649 | MS.gene60397 | PPI |
| MS.gene46347 | MS.gene011649 | PPI |
| MS.gene60398 | MS.gene011649 | PPI |
| MS.gene011649 | MS.gene09658 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011649.t1 | MTR_4g098570 | 97.378 | 534 | 14 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1077 |
| MS.gene011649.t1 | MTR_4g098610 | 89.098 | 532 | 58 | 0 | 1 | 532 | 1 | 532 | 0.0 | 914 |
| MS.gene011649.t1 | MTR_5g014310 | 74.503 | 553 | 118 | 7 | 1 | 534 | 1 | 549 | 0.0 | 801 |
| MS.gene011649.t1 | MTR_1g115140 | 57.435 | 538 | 215 | 4 | 9 | 534 | 1 | 536 | 0.0 | 622 |
| MS.gene011649.t1 | MTR_1g115175 | 58.912 | 533 | 200 | 6 | 16 | 534 | 5 | 532 | 0.0 | 614 |
| MS.gene011649.t1 | MTR_1g115190 | 58.287 | 537 | 206 | 5 | 11 | 532 | 1 | 534 | 0.0 | 597 |
| MS.gene011649.t1 | MTR_1g077670 | 34.845 | 485 | 253 | 8 | 25 | 504 | 23 | 449 | 1.58e-95 | 299 |
| MS.gene011649.t1 | MTR_4g051575 | 44.510 | 337 | 180 | 4 | 36 | 370 | 29 | 360 | 1.46e-92 | 291 |
| MS.gene011649.t1 | MTR_1g077660 | 40.000 | 360 | 209 | 3 | 41 | 399 | 38 | 391 | 1.58e-91 | 288 |
| MS.gene011649.t1 | MTR_8g104110 | 32.895 | 532 | 307 | 11 | 11 | 505 | 37 | 555 | 8.41e-87 | 279 |
| MS.gene011649.t1 | MTR_7g106260 | 43.023 | 344 | 186 | 3 | 49 | 389 | 42 | 378 | 1.47e-86 | 275 |
| MS.gene011649.t1 | MTR_2g087288 | 37.010 | 408 | 240 | 7 | 49 | 446 | 37 | 437 | 7.72e-85 | 270 |
| MS.gene011649.t1 | MTR_6g084680 | 32.696 | 523 | 298 | 10 | 22 | 505 | 69 | 576 | 1.12e-81 | 266 |
| MS.gene011649.t1 | MTR_1g111250 | 33.881 | 487 | 287 | 10 | 48 | 511 | 73 | 547 | 8.03e-80 | 260 |
| MS.gene011649.t1 | MTR_7g094770 | 39.583 | 336 | 182 | 6 | 54 | 381 | 61 | 383 | 1.28e-79 | 256 |
| MS.gene011649.t1 | MTR_2g087285 | 39.306 | 346 | 202 | 4 | 49 | 391 | 37 | 377 | 1.07e-78 | 254 |
| MS.gene011649.t1 | MTR_8g104130 | 33.602 | 497 | 278 | 9 | 49 | 505 | 59 | 543 | 1.17e-78 | 258 |
| MS.gene011649.t1 | MTR_8g104120 | 32.422 | 512 | 301 | 11 | 35 | 505 | 46 | 553 | 1.96e-75 | 249 |
| MS.gene011649.t1 | MTR_0710s0020 | 65.922 | 179 | 60 | 1 | 16 | 194 | 6 | 183 | 4.96e-74 | 233 |
| MS.gene011649.t1 | MTR_4g051575 | 43.243 | 222 | 120 | 3 | 151 | 370 | 9 | 226 | 1.98e-52 | 182 |
| MS.gene011649.t1 | MTR_1g110380 | 37.143 | 105 | 42 | 2 | 123 | 227 | 3 | 83 | 3.37e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011649.t1 | AT4G17970 | 62.795 | 551 | 142 | 9 | 1 | 506 | 1 | 533 | 0.0 | 662 |
| MS.gene011649.t1 | AT5G46610 | 58.984 | 551 | 178 | 9 | 1 | 519 | 1 | 535 | 0.0 | 613 |
| MS.gene011649.t1 | AT5G46600 | 57.383 | 535 | 193 | 7 | 9 | 516 | 10 | 536 | 0.0 | 600 |
| MS.gene011649.t1 | AT5G46610 | 55.717 | 551 | 172 | 10 | 1 | 519 | 1 | 511 | 0.0 | 561 |
| MS.gene011649.t1 | AT5G46610 | 51.543 | 551 | 172 | 11 | 1 | 519 | 1 | 488 | 1.10e-172 | 497 |
| MS.gene011649.t1 | AT4G00910 | 34.615 | 494 | 266 | 8 | 29 | 519 | 42 | 481 | 4.56e-96 | 300 |
| MS.gene011649.t1 | AT1G08440 | 42.587 | 317 | 178 | 2 | 49 | 363 | 13 | 327 | 4.92e-88 | 280 |
| MS.gene011649.t1 | AT3G18440 | 33.398 | 515 | 302 | 9 | 43 | 518 | 73 | 585 | 1.09e-83 | 271 |
| MS.gene011649.t1 | AT1G08430 | 37.971 | 345 | 210 | 2 | 49 | 389 | 13 | 357 | 6.10e-80 | 259 |
| MS.gene011649.t1 | AT1G18420 | 34.000 | 500 | 288 | 12 | 46 | 505 | 80 | 577 | 1.25e-79 | 260 |
| MS.gene011649.t1 | AT1G18420 | 33.871 | 496 | 286 | 12 | 50 | 505 | 1 | 494 | 4.62e-78 | 254 |
| MS.gene011649.t1 | AT3G11680 | 39.452 | 365 | 214 | 2 | 27 | 389 | 16 | 375 | 4.94e-78 | 254 |
| MS.gene011649.t1 | AT3G11680 | 39.452 | 365 | 214 | 2 | 27 | 389 | 14 | 373 | 5.68e-78 | 253 |
| MS.gene011649.t1 | AT2G27240 | 39.823 | 339 | 186 | 4 | 49 | 379 | 13 | 341 | 1.52e-75 | 247 |
| MS.gene011649.t1 | AT2G27240 | 37.466 | 363 | 187 | 5 | 49 | 379 | 13 | 367 | 3.21e-72 | 239 |
| MS.gene011649.t1 | AT2G17470 | 31.211 | 487 | 303 | 11 | 49 | 508 | 31 | 512 | 8.68e-69 | 231 |
| MS.gene011649.t1 | AT2G17470 | 31.211 | 487 | 303 | 11 | 49 | 508 | 53 | 534 | 1.32e-68 | 231 |
| MS.gene011649.t1 | AT1G68600 | 29.714 | 525 | 324 | 14 | 20 | 505 | 11 | 529 | 3.90e-66 | 224 |
| MS.gene011649.t1 | AT1G25480 | 31.200 | 500 | 301 | 12 | 44 | 505 | 47 | 541 | 5.75e-66 | 223 |
| MS.gene011649.t1 | AT4G17585 | 70.423 | 71 | 16 | 2 | 34 | 103 | 28 | 94 | 2.87e-23 | 96.7 |
Find 129 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGTTCGAGTCCTGTTTA+AGG | 0.156833 | 8.2:-23729159 | MS.gene011649:CDS |
| TCATAATTCTTCTTTATATA+AGG | 0.201014 | 8.2:+23730510 | None:intergenic |
| GTATTGGCCAAAATGCTATT+TGG | 0.201944 | 8.2:-23731272 | MS.gene011649:CDS |
| TGTATCATTGCTTTATATAT+TGG | 0.204199 | 8.2:-23731310 | MS.gene011649:CDS |
| GCCTTATAACCTTTGTATAT+TGG | 0.218651 | 8.2:+23730113 | None:intergenic |
| CAAAGGTTATAAGGCTGTTT+TGG | 0.221522 | 8.2:-23730105 | MS.gene011649:CDS |
| CTGTTCAGCTGATACACTTT+TGG | 0.231447 | 8.2:+23728860 | None:intergenic |
| GACACTATTAGCTGGATTAT+TGG | 0.233565 | 8.2:-23730988 | MS.gene011649:CDS |
| ATATTGGAGCCACTCTTTAA+AGG | 0.248165 | 8.2:-23731294 | MS.gene011649:CDS |
| CGGCATACCTTCTATAGATT+TGG | 0.257767 | 8.2:+23730281 | None:intergenic |
| ATTCTTCAGCTTTGTTAAAC+TGG | 0.260144 | 8.2:-23728887 | MS.gene011649:CDS |
| TCAAGGCCATCATGAACTTT+AGG | 0.263685 | 8.2:+23731513 | None:intergenic |
| AGATGATCAGAGAGTATTTC+TGG | 0.270507 | 8.2:+23729053 | None:intergenic |
| TGACAGCCCAAATAGCATTT+TGG | 0.284563 | 8.2:+23731265 | None:intergenic |
| ATAAAGAAGAATTATGATTA+TGG | 0.291591 | 8.2:-23730504 | MS.gene011649:CDS |
| AATGCATGGATCACCCTTCT+TGG | 0.296126 | 8.2:+23731357 | None:intergenic |
| GAAACCAAGAGTTGATGTTT+TGG | 0.300117 | 8.2:-23728607 | MS.gene011649:CDS |
| TCCAATATACAAAGGTTATA+AGG | 0.319254 | 8.2:-23730114 | MS.gene011649:CDS |
| CTACTCCATGAGAAGGTAAA+TGG | 0.323183 | 8.2:+23728580 | None:intergenic |
| AGGTCTTCCCCTGACCAATT+TGG | 0.323780 | 8.2:+23730339 | None:intergenic |
| GCTTAAAAGGATTCCTTGTT+TGG | 0.330987 | 8.2:-23731415 | MS.gene011649:CDS |
| CTGTTTGAGAACCGAAATTC+AGG | 0.333743 | 8.2:-23729673 | MS.gene011649:intron |
| ATGTTACGCTACCTGAATTT+CGG | 0.335086 | 8.2:+23729662 | None:intergenic |
| TGTTAACTGTTTCGAGTTAC+CGG | 0.338096 | 8.2:-23730452 | MS.gene011649:CDS |
| GTTGGGAGCCAAGGCATTCT+AGG | 0.347134 | 8.2:-23729782 | MS.gene011649:CDS |
| TGCTTCTTTGCTTGTGGAAA+CGG | 0.348987 | 8.2:-23728730 | MS.gene011649:CDS |
| GAAATGTTCTTCGCCAATTC+GGG | 0.349999 | 8.2:-23729719 | MS.gene011649:CDS |
| GTTGTTTGCTTGGATGTCAT+TGG | 0.352489 | 8.2:+23728968 | None:intergenic |
| TGTGGAAACGGTGGCAAAAC+TGG | 0.354584 | 8.2:-23728718 | MS.gene011649:CDS |
| GAGCCACTCTTTAAAGGTAT+TGG | 0.357520 | 8.2:-23731288 | MS.gene011649:CDS |
| AAAGGATTCCTTGTTTGGTT+TGG | 0.357623 | 8.2:-23731410 | MS.gene011649:CDS |
| TATTGGCCAAAATGCTATTT+GGG | 0.383356 | 8.2:-23731271 | MS.gene011649:CDS |
| TTAGTATTTCCAAATTGGTC+AGG | 0.390261 | 8.2:-23730348 | MS.gene011649:CDS |
| TCCACGGCTTTCAAACTTGA+AGG | 0.400794 | 8.2:-23730309 | MS.gene011649:CDS |
| GGAAATGTTCTTCGCCAATT+CGG | 0.402797 | 8.2:-23729720 | MS.gene011649:CDS |
| TCTCAACCACGACTCTTCTT+AGG | 0.410653 | 8.2:-23728993 | MS.gene011649:CDS |
| AAAGGGATGAATAGAGGATT+GGG | 0.413205 | 8.2:-23731011 | MS.gene011649:CDS |
| TTATGCAAGGGTCCTTAAAC+AGG | 0.417088 | 8.2:+23729147 | None:intergenic |
| CTACCACTGTATACCCGAAT+TGG | 0.421456 | 8.2:+23729706 | None:intergenic |
| TTCTCCAAAACATCAACTCT+TGG | 0.424004 | 8.2:+23728603 | None:intergenic |
| TCCTAGCCATAGCCATTTCA+AGG | 0.435967 | 8.2:+23731496 | None:intergenic |
| AAAGAAGCAAAAGCAGCAAA+AGG | 0.440203 | 8.2:+23728744 | None:intergenic |
| GGCCTAGCCAAATCTATAGA+AGG | 0.440228 | 8.2:-23730288 | MS.gene011649:intron |
| TTAACAAGTTGAAGGTTAAG+AGG | 0.444355 | 8.2:+23730469 | None:intergenic |
| GATTATGTTGCAAATGCATC+TGG | 0.447074 | 8.2:-23730954 | MS.gene011649:CDS |
| AGTTCATGATGGCCTTGAAA+TGG | 0.452690 | 8.2:-23731508 | MS.gene011649:CDS |
| ATTGACGAAGTTGAAGAACT+TGG | 0.456183 | 8.2:-23728687 | MS.gene011649:CDS |
| TGTTTAAGGACCCTTGCATA+AGG | 0.456552 | 8.2:-23729145 | MS.gene011649:CDS |
| CGAAACAGTTAACAAGTTGA+AGG | 0.456924 | 8.2:+23730461 | None:intergenic |
| CTTTCCATGAGAGGCGGCTA+TGG | 0.460245 | 8.2:+23728935 | None:intergenic |
| AAAGGAAGAAGAACAATTAC+CGG | 0.462474 | 8.2:-23728835 | MS.gene011649:CDS |
| CAAAGGGATGAATAGAGGAT+TGG | 0.465958 | 8.2:-23731012 | MS.gene011649:CDS |
| CTGCAATGAAAACAGCTTGA+AGG | 0.467393 | 8.2:+23730925 | None:intergenic |
| GTTTAACAAAGCTGAAGAAT+CGG | 0.469515 | 8.2:+23728890 | None:intergenic |
| GAGAACCATTTACCTTCTCA+TGG | 0.469642 | 8.2:-23728585 | MS.gene011649:CDS |
| TGGCGAGCATGTTGTTTGCT+TGG | 0.473062 | 8.2:+23728958 | None:intergenic |
| GATCTACAGCCACTTATATG+AGG | 0.473506 | 8.2:-23730539 | MS.gene011649:CDS |
| GTGATCCATGCATTCAAAGT+TGG | 0.477949 | 8.2:-23731348 | MS.gene011649:CDS |
| TCGCAACAGTATGTAAAAGT+TGG | 0.479295 | 8.2:-23729741 | MS.gene011649:CDS |
| CGATTCTTCACCATAGCCAT+TGG | 0.480439 | 8.2:-23730399 | MS.gene011649:CDS |
| GTAGGCATTACATGCAAGTT+GGG | 0.482486 | 8.2:-23729799 | MS.gene011649:intron |
| CGGTTCTCAAACAGCCATGT+AGG | 0.484364 | 8.2:+23729682 | None:intergenic |
| GCCACCATAGCCGCCTCTCA+TGG | 0.486291 | 8.2:-23728939 | MS.gene011649:CDS |
| AGGAATAAACCTCATATAAG+TGG | 0.491938 | 8.2:+23730530 | None:intergenic |
| TGTAGGCATTACATGCAAGT+TGG | 0.498958 | 8.2:-23729800 | MS.gene011649:intron |
| TTATGCAAAGGGATGAATAG+AGG | 0.501135 | 8.2:-23731017 | MS.gene011649:CDS |
| GTTTGGTTTGGAAGACTACA+TGG | 0.504622 | 8.2:-23731398 | MS.gene011649:CDS |
| TACGTTTCTTCCATTTCTCA+AGG | 0.504702 | 8.2:+23731457 | None:intergenic |
| GCCTTCAAGTTTGAAAGCCG+TGG | 0.510991 | 8.2:+23730308 | None:intergenic |
| GCGCCGACTTCTTATGCTGT+TGG | 0.511246 | 8.2:+23729085 | None:intergenic |
| TACATGCAAGTTGGGAGCCA+AGG | 0.512610 | 8.2:-23729791 | MS.gene011649:CDS |
| CAATGGCTATGGTGAAGAAT+CGG | 0.515245 | 8.2:+23730400 | None:intergenic |
| TCCATGAGAGGCGGCTATGG+TGG | 0.516245 | 8.2:+23728938 | None:intergenic |
| AGTTGAAGAACTTGGGAGGT+TGG | 0.516985 | 8.2:-23728679 | MS.gene011649:CDS |
| AAGACTCATGAAAAGACAAA+TGG | 0.520278 | 8.2:+23730371 | None:intergenic |
| ATAAACCAACTTTGAATGCA+TGG | 0.520687 | 8.2:+23731343 | None:intergenic |
| GCTTACCAATGTTTCATCTG+TGG | 0.526234 | 8.2:+23730073 | None:intergenic |
| TAGTATTTCCAAATTGGTCA+GGG | 0.528241 | 8.2:-23730347 | MS.gene011649:CDS |
| GGATTGGGGACACTATTAGC+TGG | 0.534552 | 8.2:-23730996 | MS.gene011649:CDS |
| TTGACGAAGTTGAAGAACTT+GGG | 0.540827 | 8.2:-23728686 | MS.gene011649:CDS |
| TGACAGTACCTAGAATGCCT+TGG | 0.545491 | 8.2:+23729774 | None:intergenic |
| GGTTCTCAAACAGCCATGTA+GGG | 0.547487 | 8.2:+23729683 | None:intergenic |
| CAAGTTTGAAAGCCGTGGAA+TGG | 0.554909 | 8.2:+23730313 | None:intergenic |
| TCTGCTGCTAGCCTTATGCA+AGG | 0.556979 | 8.2:+23729134 | None:intergenic |
| CAGGGGCAACTTTATGCAAA+GGG | 0.557117 | 8.2:-23731028 | MS.gene011649:CDS |
| GCCTTGAAATGGCTATGGCT+AGG | 0.564062 | 8.2:-23731497 | MS.gene011649:CDS |
| AGAACAATTACCGGTACGTA+AGG | 0.566107 | 8.2:-23728826 | MS.gene011649:CDS |
| TATACAGTGGTAGCCCTACA+TGG | 0.566554 | 8.2:-23729696 | MS.gene011649:CDS |
| TGGCCAATACCTTTAAAGAG+TGG | 0.568510 | 8.2:+23731285 | None:intergenic |
| GGTTGATCATGTCTTGAAGA+TGG | 0.569323 | 8.2:-23730430 | MS.gene011649:CDS |
| TGATGGCCTTGAAATGGCTA+TGG | 0.571361 | 8.2:-23731502 | MS.gene011649:CDS |
| AACAGGACTCGAACAGATTG+TGG | 0.571380 | 8.2:+23729164 | None:intergenic |
| AATGGCACAACCAATGGCTA+TGG | 0.576065 | 8.2:+23730389 | None:intergenic |
| AAAATCCACAGATGAAACAT+TGG | 0.576415 | 8.2:-23730078 | MS.gene011649:intron |
| GCAGGGGCAACTTTATGCAA+AGG | 0.576987 | 8.2:-23731029 | MS.gene011649:intron |
| AAGACAAATGGCACAACCAA+TGG | 0.577542 | 8.2:+23730383 | None:intergenic |
| TTTCTCAACACCTTACGTAC+CGG | 0.581127 | 8.2:+23728816 | None:intergenic |
| ATGATTCCTAAAGTTCATGA+TGG | 0.582610 | 8.2:-23731519 | MS.gene011649:CDS |
| GAGTGAGCTCTTTCCATGAG+AGG | 0.583770 | 8.2:+23728926 | None:intergenic |
| TCGGATGTGATGATCCAAGA+AGG | 0.583906 | 8.2:-23731371 | MS.gene011649:CDS |
| TTGCATAAGGCTAGCAGCAG+AGG | 0.586458 | 8.2:-23729132 | MS.gene011649:CDS |
| TTCTTTGCTTGTGGAAACGG+TGG | 0.592923 | 8.2:-23728727 | MS.gene011649:CDS |
| CTAATAGAAAACTCATCACC+AGG | 0.594652 | 8.2:+23728636 | None:intergenic |
| TACCTTCTATAGATTTGGCT+AGG | 0.594807 | 8.2:+23730286 | None:intergenic |
| GTTAACTGTTTCGAGTTACC+GGG | 0.596470 | 8.2:-23730451 | MS.gene011649:CDS |
| AGAGTATTTCTGGTGAGCAA+TGG | 0.601068 | 8.2:+23729063 | None:intergenic |
| GGAAGACCTTCACCATTCCA+CGG | 0.602741 | 8.2:-23730325 | MS.gene011649:CDS |
| TGAAAGCCGTGGAATGGTGA+AGG | 0.607294 | 8.2:+23730319 | None:intergenic |
| TGTATCAGCTGAACAGACAA+AGG | 0.608885 | 8.2:-23728853 | MS.gene011649:CDS |
| GGTGATATAAAATCATCTGA+AGG | 0.611420 | 8.2:-23730137 | MS.gene011649:CDS |
| CTGCTGCTAGCCTTATGCAA+GGG | 0.615929 | 8.2:+23729135 | None:intergenic |
| TGGAAGACTACATGGAAGGT+CGG | 0.617088 | 8.2:-23731390 | MS.gene011649:CDS |
| GGTTTGGAAGACTACATGGA+AGG | 0.620257 | 8.2:-23731394 | MS.gene011649:CDS |
| CGGATGTGATGATCCAAGAA+GGG | 0.624692 | 8.2:-23731370 | MS.gene011649:CDS |
| GAAGAATTATGATTATGGTG+TGG | 0.626346 | 8.2:-23730499 | MS.gene011649:CDS |
| GGCTGTCATGACTGTCGTCG+TGG | 0.630752 | 8.2:-23731250 | MS.gene011649:CDS |
| GTAGTCTTCCAAACCAAACA+AGG | 0.632776 | 8.2:+23731402 | None:intergenic |
| ACGAAGTTGAAGAACTTGGG+AGG | 0.635974 | 8.2:-23728683 | MS.gene011649:CDS |
| AATCACTCTACTCCATGAGA+AGG | 0.644576 | 8.2:+23728573 | None:intergenic |
| TAGCCAACAGCATAAGAAGT+CGG | 0.647738 | 8.2:-23729088 | MS.gene011649:CDS |
| AGTATTTCCAAATTGGTCAG+GGG | 0.650407 | 8.2:-23730346 | MS.gene011649:CDS |
| TGTTTCAAAGAGTATACACC+TGG | 0.658227 | 8.2:-23728654 | MS.gene011649:CDS |
| TTGGAGCCTAAGAAGAGTCG+TGG | 0.661184 | 8.2:+23728987 | None:intergenic |
| TCTGAAGGTCCAATATACAA+AGG | 0.663082 | 8.2:-23730122 | MS.gene011649:CDS |
| TCGCCAATTCGGGTATACAG+TGG | 0.664124 | 8.2:-23729709 | MS.gene011649:CDS |
| TGAGCTCTTTCCATGAGAGG+CGG | 0.667299 | 8.2:+23728929 | None:intergenic |
| AAGGGATGAATAGAGGATTG+GGG | 0.679447 | 8.2:-23731010 | MS.gene011649:CDS |
| GCTATGGCTAGGAATGAGAG+TGG | 0.689742 | 8.2:-23731486 | MS.gene011649:CDS |
| TCTTCAAGACATGATCAACC+CGG | 0.698255 | 8.2:+23730433 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAACATTATACATAT+AGG | + | chr8.2:23729299-23729318 | None:intergenic | 10.0% |
| !!! | TATATATTTGATAATCTAAA+TGG | - | chr8.2:23729211-23729230 | MS.gene011649:intron | 10.0% |
| !!! | TTAATATGTAAACTTTTTTA+TGG | - | chr8.2:23729043-23729062 | MS.gene011649:CDS | 10.0% |
| !! | ATAAAGAAGAATTATGATTA+TGG | - | chr8.2:23729590-23729609 | MS.gene011649:intron | 15.0% |
| !! | ATAGTAGTTATATTTATAAG+TGG | - | chr8.2:23730581-23730600 | MS.gene011649:intron | 15.0% |
| !! | GGATAATAAATTGAATTAAA+AGG | + | chr8.2:23730900-23730919 | None:intergenic | 15.0% |
| !! | TAGTAGTTATATTTATAAGT+GGG | - | chr8.2:23730582-23730601 | MS.gene011649:intron | 15.0% |
| !! | TCATAATTCTTCTTTATATA+AGG | + | chr8.2:23729587-23729606 | None:intergenic | 15.0% |
| !! | ATAATATCTTGATCTTCAAA+TGG | - | chr8.2:23730256-23730275 | MS.gene011649:intron | 20.0% |
| !! | ATTTGATACGTCTTAAAATT+TGG | + | chr8.2:23730657-23730676 | None:intergenic | 20.0% |
| !! | TAGTTGTAGAAATATGAAAA+AGG | - | chr8.2:23730807-23730826 | MS.gene011649:intron | 20.0% |
| !! | TATATTAGCAACTTATTGTA+AGG | - | chr8.2:23729878-23729897 | MS.gene011649:intron | 20.0% |
| !! | TATTCCATCAATGAATATAA+AGG | + | chr8.2:23730542-23730561 | None:intergenic | 20.0% |
| !! | TGTATCATTGCTTTATATAT+TGG | - | chr8.2:23728784-23728803 | MS.gene011649:CDS | 20.0% |
| !!! | ACTTTTATCGAAATTATTTG+TGG | - | chr8.2:23729504-23729523 | MS.gene011649:intron | 20.0% |
| !!! | TATTTTTTTTGCCAATATCA+TGG | + | chr8.2:23728920-23728939 | None:intergenic | 20.0% |
| !!! | TGTGTCAATGAATATTTTTA+TGG | - | chr8.2:23729918-23729937 | MS.gene011649:intron | 20.0% |
| ! | AATTTAGACTTATCTTTGAG+TGG | + | chr8.2:23730707-23730726 | None:intergenic | 25.0% |
| ! | CTATGTATGTGTTATGAATT+CGG | + | chr8.2:23729836-23729855 | None:intergenic | 25.0% |
| ! | GAGCAATTTATCAAAACAAA+GGG | + | chr8.2:23729266-23729285 | None:intergenic | 25.0% |
| ! | GATACCTTTATATTCATTGA+TGG | - | chr8.2:23730535-23730554 | MS.gene011649:CDS | 25.0% |
| ! | TAACACATACATAGTATCAA+AGG | - | chr8.2:23729842-23729861 | MS.gene011649:intron | 25.0% |
| ! | TAAGACGTATCAAATTATGT+TGG | - | chr8.2:23730662-23730681 | MS.gene011649:intron | 25.0% |
| ! | TATGGAAAAATTGAAGTTTC+TGG | - | chr8.2:23729936-23729955 | MS.gene011649:intron | 25.0% |
| ! | TCCAATATACAAAGGTTATA+AGG | - | chr8.2:23729980-23729999 | MS.gene011649:intron | 25.0% |
| ! | TGAGCAATTTATCAAAACAA+AGG | + | chr8.2:23729267-23729286 | None:intergenic | 25.0% |
| !! | AAAACAAAGGGAATTTTTCA+AGG | + | chr8.2:23729254-23729273 | None:intergenic | 25.0% |
| !! | AAGAAACGTATGCATATTTT+TGG | - | chr8.2:23728650-23728669 | MS.gene011649:CDS | 25.0% |
| !! | ATACTTAGCATGATTTTGAA+TGG | + | chr8.2:23730065-23730084 | None:intergenic | 25.0% |
| !! | GTCTTTTAGTATTTCCAAAT+TGG | - | chr8.2:23729741-23729760 | MS.gene011649:CDS | 25.0% |
| !!! | ATGTAAACTTTTTTATGGCA+GGG | - | chr8.2:23729048-23729067 | MS.gene011649:CDS | 25.0% |
| !!! | TATGTAAACTTTTTTATGGC+AGG | - | chr8.2:23729047-23729066 | MS.gene011649:CDS | 25.0% |
| !!! | TTAGAATTTGCTAAATCGTA+GGG | + | chr8.2:23730773-23730792 | None:intergenic | 25.0% |
| AAAATCCACAGATGAAACAT+TGG | - | chr8.2:23730016-23730035 | MS.gene011649:intron | 30.0% | |
| AAAGGAAGAAGAACAATTAC+CGG | - | chr8.2:23731259-23731278 | MS.gene011649:CDS | 30.0% | |
| AAGACTCATGAAAAGACAAA+TGG | + | chr8.2:23729726-23729745 | None:intergenic | 30.0% | |
| AAGTTTGAGTGAAAAGAAGT+TGG | + | chr8.2:23729488-23729507 | None:intergenic | 30.0% | |
| AATTCCAAAAGCAAATTCAC+GGG | + | chr8.2:23730619-23730638 | None:intergenic | 30.0% | |
| ACGTATCAAATTATGTTGGT+GGG | - | chr8.2:23730666-23730685 | MS.gene011649:intron | 30.0% | |
| ACTATTTGAACTAGTCAAAG+TGG | + | chr8.2:23730566-23730585 | None:intergenic | 30.0% | |
| AGGAATAAACCTCATATAAG+TGG | + | chr8.2:23729567-23729586 | None:intergenic | 30.0% | |
| ATAAACCAACTTTGAATGCA+TGG | + | chr8.2:23728754-23728773 | None:intergenic | 30.0% | |
| ATGATTCCTAAAGTTCATGA+TGG | - | chr8.2:23728575-23728594 | MS.gene011649:CDS | 30.0% | |
| CAATTCCAAAAGCAAATTCA+CGG | + | chr8.2:23730620-23730639 | None:intergenic | 30.0% | |
| GAAGAATTATGATTATGGTG+TGG | - | chr8.2:23729595-23729614 | MS.gene011649:intron | 30.0% | |
| GCCTTATAACCTTTGTATAT+TGG | + | chr8.2:23729984-23730003 | None:intergenic | 30.0% | |
| GGTGATATAAAATCATCTGA+AGG | - | chr8.2:23729957-23729976 | MS.gene011649:intron | 30.0% | |
| GTGATGACAACAAATATTGT+TGG | + | chr8.2:23729408-23729427 | None:intergenic | 30.0% | |
| GTTTAACAAAGCTGAAGAAT+CGG | + | chr8.2:23731207-23731226 | None:intergenic | 30.0% | |
| TAGTATTTCCAAATTGGTCA+GGG | - | chr8.2:23729747-23729766 | MS.gene011649:CDS | 30.0% | |
| TGAATGGATCAAAACAAGAT+TGG | + | chr8.2:23730049-23730068 | None:intergenic | 30.0% | |
| TTAGTATTTCCAAATTGGTC+AGG | - | chr8.2:23729746-23729765 | MS.gene011649:CDS | 30.0% | |
| ! | AAAGAAGTTGGTTACAATTG+AGG | + | chr8.2:23729476-23729495 | None:intergenic | 30.0% |
| ! | GCAGTTGCAGTTTTTATAAT+AGG | - | chr8.2:23729188-23729207 | MS.gene011649:intron | 30.0% |
| ! | TATTGGCCAAAATGCTATTT+GGG | - | chr8.2:23728823-23728842 | MS.gene011649:CDS | 30.0% |
| ! | TTAACAAGTTGAAGGTTAAG+AGG | + | chr8.2:23729628-23729647 | None:intergenic | 30.0% |
| !! | ATTCTTCAGCTTTGTTAAAC+TGG | - | chr8.2:23731207-23731226 | MS.gene011649:intron | 30.0% |
| !! | CTTAGAATTTGCTAAATCGT+AGG | + | chr8.2:23730774-23730793 | None:intergenic | 30.0% |
| !! | TCCTGTTAATTTGTTGTGTA+TGG | - | chr8.2:23729529-23729548 | MS.gene011649:intron | 30.0% |
| !!! | TGCTTTTTCATCCATGATAT+TGG | - | chr8.2:23728906-23728925 | MS.gene011649:CDS | 30.0% |
| !!! | TGTAAACTTTTTTATGGCAG+GGG | - | chr8.2:23729049-23729068 | MS.gene011649:CDS | 30.0% |
| AAAGAAGCAAAAGCAGCAAA+AGG | + | chr8.2:23731353-23731372 | None:intergenic | 35.0% | |
| AAAGGGATGAATAGAGGATT+GGG | - | chr8.2:23729083-23729102 | MS.gene011649:CDS | 35.0% | |
| AGTATTTCCAAATTGGTCAG+GGG | - | chr8.2:23729748-23729767 | MS.gene011649:CDS | 35.0% | |
| ATATTGGAGCCACTCTTTAA+AGG | - | chr8.2:23728800-23728819 | MS.gene011649:CDS | 35.0% | |
| ATCTACAATTGCTGCTGTAT+CGG | + | chr8.2:23728956-23728975 | None:intergenic | 35.0% | |
| ATGTTACGCTACCTGAATTT+CGG | + | chr8.2:23730435-23730454 | None:intergenic | 35.0% | |
| ATTCCAAAAGCAAATTCACG+GGG | + | chr8.2:23730618-23730637 | None:intergenic | 35.0% | |
| ATTGACGAAGTTGAAGAACT+TGG | - | chr8.2:23731407-23731426 | MS.gene011649:CDS | 35.0% | |
| CTAATAGAAAACTCATCACC+AGG | + | chr8.2:23731461-23731480 | None:intergenic | 35.0% | |
| GACACTATTAGCTGGATTAT+TGG | - | chr8.2:23729106-23729125 | MS.gene011649:CDS | 35.0% | |
| GACGTATCAAATTATGTTGG+TGG | - | chr8.2:23730665-23730684 | MS.gene011649:intron | 35.0% | |
| GACTTAGTACGCATAATTTG+TGG | + | chr8.2:23730146-23730165 | None:intergenic | 35.0% | |
| GATTATGTTGCAAATGCATC+TGG | - | chr8.2:23729140-23729159 | MS.gene011649:CDS | 35.0% | |
| GCCATACACAACAAATTAAC+AGG | + | chr8.2:23729533-23729552 | None:intergenic | 35.0% | |
| GCTACAAGATAGTGAAAAGA+AGG | + | chr8.2:23729442-23729461 | None:intergenic | 35.0% | |
| GCTTAAAAGGATTCCTTGTT+TGG | - | chr8.2:23728679-23728698 | MS.gene011649:CDS | 35.0% | |
| TACCTTCTATAGATTTGGCT+AGG | + | chr8.2:23729811-23729830 | None:intergenic | 35.0% | |
| TACGTTTCTTCCATTTCTCA+AGG | + | chr8.2:23728640-23728659 | None:intergenic | 35.0% | |
| TCGCAACAGTATGTAAAAGT+TGG | - | chr8.2:23730353-23730372 | MS.gene011649:CDS | 35.0% | |
| TCTGAAGGTCCAATATACAA+AGG | - | chr8.2:23729972-23729991 | MS.gene011649:intron | 35.0% | |
| TTATGCAAAGGGATGAATAG+AGG | - | chr8.2:23729077-23729096 | MS.gene011649:CDS | 35.0% | |
| TTCTCCAAAACATCAACTCT+TGG | + | chr8.2:23731494-23731513 | None:intergenic | 35.0% | |
| TTGACGAAGTTGAAGAACTT+GGG | - | chr8.2:23731408-23731427 | MS.gene011649:CDS | 35.0% | |
| ! | AAAGGATTCCTTGTTTGGTT+TGG | - | chr8.2:23728684-23728703 | MS.gene011649:CDS | 35.0% |
| ! | ACTTTTACATACTGTTGCGA+TGG | + | chr8.2:23730353-23730372 | None:intergenic | 35.0% |
| ! | CAAAGGTTATAAGGCTGTTT+TGG | - | chr8.2:23729989-23730008 | MS.gene011649:intron | 35.0% |
| ! | CGAAACAGTTAACAAGTTGA+AGG | + | chr8.2:23729636-23729655 | None:intergenic | 35.0% |
| ! | GGTTGTGTTTTCAATTGTGT+AGG | - | chr8.2:23730277-23730296 | MS.gene011649:intron | 35.0% |
| ! | GTATTGGCCAAAATGCTATT+TGG | - | chr8.2:23728822-23728841 | MS.gene011649:CDS | 35.0% |
| ! | TGTTTCAAAGAGTATACACC+TGG | - | chr8.2:23731440-23731459 | MS.gene011649:CDS | 35.0% |
| !! | AGATGATCAGAGAGTATTTC+TGG | + | chr8.2:23731044-23731063 | None:intergenic | 35.0% |
| !! | GTTAATTTGTTGTGTATGGC+AGG | - | chr8.2:23729533-23729552 | MS.gene011649:intron | 35.0% |
| !! | TGTTAACTGTTTCGAGTTAC+CGG | - | chr8.2:23729642-23729661 | MS.gene011649:intron | 35.0% |
| !! | TTTTTGGTGAGAGGCTTAAA+AGG | - | chr8.2:23728666-23728685 | MS.gene011649:CDS | 35.0% |
| !!! | GAAACCAAGAGTTGATGTTT+TGG | - | chr8.2:23731487-23731506 | MS.gene011649:CDS | 35.0% |
| !!! | GTATGCATATTTTTGGTGAG+AGG | - | chr8.2:23728657-23728676 | MS.gene011649:CDS | 35.0% |
| AAATAACTCCCGCGTAAAGT+GGG | - | chr8.2:23730736-23730755 | MS.gene011649:intron | 40.0% | |
| AAGACAAATGGCACAACCAA+TGG | + | chr8.2:23729714-23729733 | None:intergenic | 40.0% | |
| AAGGGATGAATAGAGGATTG+GGG | - | chr8.2:23729084-23729103 | MS.gene011649:CDS | 40.0% | |
| ACAGATTGTGGTGTCTGAAA+AGG | + | chr8.2:23730921-23730940 | None:intergenic | 40.0% | |
| AGAACAATTACCGGTACGTA+AGG | - | chr8.2:23731268-23731287 | MS.gene011649:CDS | 40.0% | |
| ATATAGCTCACACTAAGAGC+TGG | - | chr8.2:23730086-23730105 | MS.gene011649:CDS | 40.0% | |
| ATCTGTTCGAGTCCTGTTTA+AGG | - | chr8.2:23730935-23730954 | MS.gene011649:CDS | 40.0% | |
| CAAAGGGATGAATAGAGGAT+TGG | - | chr8.2:23729082-23729101 | MS.gene011649:CDS | 40.0% | |
| CAATGGCTATGGTGAAGAAT+CGG | + | chr8.2:23729697-23729716 | None:intergenic | 40.0% | |
| CACGGACAGATTCACAAAAA+TGG | + | chr8.2:23730480-23730499 | None:intergenic | 40.0% | |
| CGGCATACCTTCTATAGATT+TGG | + | chr8.2:23729816-23729835 | None:intergenic | 40.0% | |
| CTACTCCATGAGAAGGTAAA+TGG | + | chr8.2:23731517-23731536 | None:intergenic | 40.0% | |
| CTGCAATGAAAACAGCTTGA+AGG | + | chr8.2:23729172-23729191 | None:intergenic | 40.0% | |
| CTGTTTGAGAACCGAAATTC+AGG | - | chr8.2:23730421-23730440 | MS.gene011649:CDS | 40.0% | |
| GAAATGTTCTTCGCCAATTC+GGG | - | chr8.2:23730375-23730394 | MS.gene011649:CDS | 40.0% | |
| GAGAACCATTTACCTTCTCA+TGG | - | chr8.2:23731509-23731528 | MS.gene011649:CDS | 40.0% | |
| GAGATGCTAAACTGTGATCA+CGG | + | chr8.2:23730498-23730517 | None:intergenic | 40.0% | |
| GATCTACAGCCACTTATATG+AGG | - | chr8.2:23729555-23729574 | MS.gene011649:intron | 40.0% | |
| GCTTACCAATGTTTCATCTG+TGG | + | chr8.2:23730024-23730043 | None:intergenic | 40.0% | |
| GGAAATGTTCTTCGCCAATT+CGG | - | chr8.2:23730374-23730393 | MS.gene011649:CDS | 40.0% | |
| GGTTGATCATGTCTTGAAGA+TGG | - | chr8.2:23729664-23729683 | MS.gene011649:intron | 40.0% | |
| GTAGGCATTACATGCAAGTT+GGG | - | chr8.2:23730295-23730314 | MS.gene011649:CDS | 40.0% | |
| GTAGTCTTCCAAACCAAACA+AGG | + | chr8.2:23728695-23728714 | None:intergenic | 40.0% | |
| GTGATCCATGCATTCAAAGT+TGG | - | chr8.2:23728746-23728765 | MS.gene011649:CDS | 40.0% | |
| GTGGCAAAAACCTTGAGAAA+TGG | - | chr8.2:23728627-23728646 | MS.gene011649:CDS | 40.0% | |
| GTTGTTTGCTTGGATGTCAT+TGG | + | chr8.2:23731129-23731148 | None:intergenic | 40.0% | |
| TAGCCAACAGCATAAGAAGT+CGG | - | chr8.2:23731006-23731025 | MS.gene011649:CDS | 40.0% | |
| TCAAGGCCATCATGAACTTT+AGG | + | chr8.2:23728584-23728603 | None:intergenic | 40.0% | |
| TCACTATCTTGTAGCTAGTC+TGG | - | chr8.2:23729447-23729466 | MS.gene011649:intron | 40.0% | |
| TCTTCAAGACATGATCAACC+CGG | + | chr8.2:23729664-23729683 | None:intergenic | 40.0% | |
| TGCTTCTTTGCTTGTGGAAA+CGG | - | chr8.2:23731364-23731383 | MS.gene011649:CDS | 40.0% | |
| TGTAGGCATTACATGCAAGT+TGG | - | chr8.2:23730294-23730313 | MS.gene011649:CDS | 40.0% | |
| TGTATCAGCTGAACAGACAA+AGG | - | chr8.2:23731241-23731260 | MS.gene011649:CDS | 40.0% | |
| TGTTTAAGGACCCTTGCATA+AGG | - | chr8.2:23730949-23730968 | MS.gene011649:CDS | 40.0% | |
| TTATGCAAGGGTCCTTAAAC+AGG | + | chr8.2:23730950-23730969 | None:intergenic | 40.0% | |
| TTTCTCAACACCTTACGTAC+CGG | + | chr8.2:23731281-23731300 | None:intergenic | 40.0% | |
| TTTGCTAAATCGTAGGGTGA+AGG | + | chr8.2:23730767-23730786 | None:intergenic | 40.0% | |
| ! | AGTTCATGATGGCCTTGAAA+TGG | - | chr8.2:23728586-23728605 | MS.gene011649:CDS | 40.0% |
| ! | CTGTTCAGCTGATACACTTT+TGG | + | chr8.2:23731237-23731256 | None:intergenic | 40.0% |
| ! | GAGCCACTCTTTAAAGGTAT+TGG | - | chr8.2:23728806-23728825 | MS.gene011649:CDS | 40.0% |
| ! | GAGTCGTGGTTGAGATTTTA+TGG | + | chr8.2:23731096-23731115 | None:intergenic | 40.0% |
| ! | TGACAGCCCAAATAGCATTT+TGG | + | chr8.2:23728832-23728851 | None:intergenic | 40.0% |
| ! | TGCTTTTGCTTCTTTGCTTG+TGG | - | chr8.2:23731358-23731377 | MS.gene011649:CDS | 40.0% |
| ! | TGGCCAATACCTTTAAAGAG+TGG | + | chr8.2:23728812-23728831 | None:intergenic | 40.0% |
| !! | AGAGTATTTCTGGTGAGCAA+TGG | + | chr8.2:23731034-23731053 | None:intergenic | 40.0% |
| !! | GTTAACTGTTTCGAGTTACC+GGG | - | chr8.2:23729643-23729662 | MS.gene011649:intron | 40.0% |
| !! | GTTTGGTTTGGAAGACTACA+TGG | - | chr8.2:23728696-23728715 | MS.gene011649:CDS | 40.0% |
| AACAGGACTCGAACAGATTG+TGG | + | chr8.2:23730933-23730952 | None:intergenic | 45.0% | |
| AATAACTCCCGCGTAAAGTG+GGG | - | chr8.2:23730737-23730756 | MS.gene011649:intron | 45.0% | |
| AATGCATGGATCACCCTTCT+TGG | + | chr8.2:23728740-23728759 | None:intergenic | 45.0% | |
| AATGGCACAACCAATGGCTA+TGG | + | chr8.2:23729708-23729727 | None:intergenic | 45.0% | |
| ACGAAGTTGAAGAACTTGGG+AGG | - | chr8.2:23731411-23731430 | MS.gene011649:CDS | 45.0% | |
| AGTTGAAGAACTTGGGAGGT+TGG | - | chr8.2:23731415-23731434 | MS.gene011649:CDS | 45.0% | |
| CAAATAACTCCCGCGTAAAG+TGG | - | chr8.2:23730735-23730754 | MS.gene011649:intron | 45.0% | |
| CAAGTTTGAAAGCCGTGGAA+TGG | + | chr8.2:23729784-23729803 | None:intergenic | 45.0% | |
| CACTTTACGCGGGAGTTATT+TGG | + | chr8.2:23730737-23730756 | None:intergenic | 45.0% | |
| CAGGGGCAACTTTATGCAAA+GGG | - | chr8.2:23729066-23729085 | MS.gene011649:CDS | 45.0% | |
| CGATTCTTCACCATAGCCAT+TGG | - | chr8.2:23729695-23729714 | MS.gene011649:CDS | 45.0% | |
| CGGATGTGATGATCCAAGAA+GGG | - | chr8.2:23728724-23728743 | MS.gene011649:CDS | 45.0% | |
| CTACCACTGTATACCCGAAT+TGG | + | chr8.2:23730391-23730410 | None:intergenic | 45.0% | |
| GGCCTAGCCAAATCTATAGA+AGG | - | chr8.2:23729806-23729825 | MS.gene011649:intron | 45.0% | |
| GGTTCTCAAACAGCCATGTA+GGG | + | chr8.2:23730414-23730433 | None:intergenic | 45.0% | |
| GGTTTGGAAGACTACATGGA+AGG | - | chr8.2:23728700-23728719 | MS.gene011649:CDS | 45.0% | |
| TATACAGTGGTAGCCCTACA+TGG | - | chr8.2:23730398-23730417 | MS.gene011649:CDS | 45.0% | |
| TCCACGGCTTTCAAACTTGA+AGG | - | chr8.2:23729785-23729804 | MS.gene011649:CDS | 45.0% | |
| TCCTAGCCATAGCCATTTCA+AGG | + | chr8.2:23728601-23728620 | None:intergenic | 45.0% | |
| TCGGATGTGATGATCCAAGA+AGG | - | chr8.2:23728723-23728742 | MS.gene011649:CDS | 45.0% | |
| TCTCAACCACGACTCTTCTT+AGG | - | chr8.2:23731101-23731120 | MS.gene011649:intron | 45.0% | |
| TGACAGTACCTAGAATGCCT+TGG | + | chr8.2:23730323-23730342 | None:intergenic | 45.0% | |
| TGGAAGACTACATGGAAGGT+CGG | - | chr8.2:23728704-23728723 | MS.gene011649:CDS | 45.0% | |
| TTCTTTGCTTGTGGAAACGG+TGG | - | chr8.2:23731367-23731386 | MS.gene011649:CDS | 45.0% | |
| ! | CTATCTTGTAGCTAGTCTGG+AGG | - | chr8.2:23729450-23729469 | MS.gene011649:intron | 45.0% |
| ! | GAGATTTTATGGCTGCGTTG+AGG | + | chr8.2:23731085-23731104 | None:intergenic | 45.0% |
| ! | TGATGGCCTTGAAATGGCTA+TGG | - | chr8.2:23728592-23728611 | MS.gene011649:CDS | 45.0% |
| !! | TGAATAAATAAATATTTATT+AGG | + | chr8.2:23730202-23730221 | None:intergenic | 5.0% |
| AGGTCTTCCCCTGACCAATT+TGG | + | chr8.2:23729758-23729777 | None:intergenic | 50.0% | |
| ATAACTCCCGCGTAAAGTGG+GGG | - | chr8.2:23730738-23730757 | MS.gene011649:intron | 50.0% | |
| CCAAAAGCAAATTCACGGGG+TGG | + | chr8.2:23730615-23730634 | None:intergenic | 50.0% | |
| CGGTTCTCAAACAGCCATGT+AGG | + | chr8.2:23730415-23730434 | None:intergenic | 50.0% | |
| GAGTGAGCTCTTTCCATGAG+AGG | + | chr8.2:23731171-23731190 | None:intergenic | 50.0% | |
| GCAGGGGCAACTTTATGCAA+AGG | - | chr8.2:23729065-23729084 | MS.gene011649:CDS | 50.0% | |
| GCCTTGAAATGGCTATGGCT+AGG | - | chr8.2:23728597-23728616 | MS.gene011649:CDS | 50.0% | |
| GCTATGGCTAGGAATGAGAG+TGG | - | chr8.2:23728608-23728627 | MS.gene011649:CDS | 50.0% | |
| GGAAGACCTTCACCATTCCA+CGG | - | chr8.2:23729769-23729788 | MS.gene011649:CDS | 50.0% | |
| GGATTGGGGACACTATTAGC+TGG | - | chr8.2:23729098-23729117 | MS.gene011649:CDS | 50.0% | |
| TCGCCAATTCGGGTATACAG+TGG | - | chr8.2:23730385-23730404 | MS.gene011649:CDS | 50.0% | |
| TCTTTGAGTGGCTCGATGAC+TGG | + | chr8.2:23730695-23730714 | None:intergenic | 50.0% | |
| TGAAAGCCGTGGAATGGTGA+AGG | + | chr8.2:23729778-23729797 | None:intergenic | 50.0% | |
| TGAGCTCTTTCCATGAGAGG+CGG | + | chr8.2:23731168-23731187 | None:intergenic | 50.0% | |
| TGTGGAAACGGTGGCAAAAC+TGG | - | chr8.2:23731376-23731395 | MS.gene011649:CDS | 50.0% | |
| TTGCATAAGGCTAGCAGCAG+AGG | - | chr8.2:23730962-23730981 | MS.gene011649:CDS | 50.0% | |
| TTGGAGCCTAAGAAGAGTCG+TGG | + | chr8.2:23731110-23731129 | None:intergenic | 50.0% | |
| ! | GCCTTCAAGTTTGAAAGCCG+TGG | + | chr8.2:23729789-23729808 | None:intergenic | 50.0% |
| ! | TACATGCAAGTTGGGAGCCA+AGG | - | chr8.2:23730303-23730322 | MS.gene011649:CDS | 50.0% |
| ! | TGGCGAGCATGTTGTTTGCT+TGG | + | chr8.2:23731139-23731158 | None:intergenic | 50.0% |
| !! | CCACCCCGTGAATTTGCTTT+TGG | - | chr8.2:23730612-23730631 | MS.gene011649:intron | 50.0% |
| !! | CTGCTGCTAGCCTTATGCAA+GGG | + | chr8.2:23730962-23730981 | None:intergenic | 50.0% |
| !! | TCTGCTGCTAGCCTTATGCA+AGG | + | chr8.2:23730963-23730982 | None:intergenic | 50.0% |
| !!! | GTGGTTTTCGAGTTCACTGC+AGG | - | chr8.2:23728863-23728882 | MS.gene011649:CDS | 50.0% |
| AAGGTTGCCCCCACTTTACG+CGG | + | chr8.2:23730748-23730767 | None:intergenic | 55.0% | |
| CTTTCCATGAGAGGCGGCTA+TGG | + | chr8.2:23731162-23731181 | None:intergenic | 55.0% | |
| ! | GTTGGGAGCCAAGGCATTCT+AGG | - | chr8.2:23730312-23730331 | MS.gene011649:CDS | 55.0% |
| !! | GCGCCGACTTCTTATGCTGT+TGG | + | chr8.2:23731012-23731031 | None:intergenic | 55.0% |
| AGGTTGCCCCCACTTTACGC+GGG | + | chr8.2:23730747-23730766 | None:intergenic | 60.0% | |
| GGCTGTCATGACTGTCGTCG+TGG | - | chr8.2:23728844-23728863 | MS.gene011649:CDS | 60.0% | |
| TCCATGAGAGGCGGCTATGG+TGG | + | chr8.2:23731159-23731178 | None:intergenic | 60.0% | |
| GCCACCATAGCCGCCTCTCA+TGG | - | chr8.2:23731155-23731174 | MS.gene011649:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 23728575 | 23731541 | 23728575 | ID=MS.gene011649 |
| chr8.2 | mRNA | 23728575 | 23731541 | 23728575 | ID=MS.gene011649.t1;Parent=MS.gene011649 |
| chr8.2 | exon | 23731232 | 23731541 | 23731232 | ID=MS.gene011649.t1.exon1;Parent=MS.gene011649.t1 |
| chr8.2 | CDS | 23731232 | 23731541 | 23731232 | ID=cds.MS.gene011649.t1;Parent=MS.gene011649.t1 |
| chr8.2 | exon | 23730907 | 23731047 | 23730907 | ID=MS.gene011649.t1.exon2;Parent=MS.gene011649.t1 |
| chr8.2 | CDS | 23730907 | 23731047 | 23730907 | ID=cds.MS.gene011649.t1;Parent=MS.gene011649.t1 |
| chr8.2 | exon | 23730289 | 23730561 | 23730289 | ID=MS.gene011649.t1.exon3;Parent=MS.gene011649.t1 |
| chr8.2 | CDS | 23730289 | 23730561 | 23730289 | ID=cds.MS.gene011649.t1;Parent=MS.gene011649.t1 |
| chr8.2 | exon | 23730079 | 23730200 | 23730079 | ID=MS.gene011649.t1.exon4;Parent=MS.gene011649.t1 |
| chr8.2 | CDS | 23730079 | 23730200 | 23730079 | ID=cds.MS.gene011649.t1;Parent=MS.gene011649.t1 |
| chr8.2 | exon | 23729674 | 23729817 | 23729674 | ID=MS.gene011649.t1.exon5;Parent=MS.gene011649.t1 |
| chr8.2 | CDS | 23729674 | 23729817 | 23729674 | ID=cds.MS.gene011649.t1;Parent=MS.gene011649.t1 |
| chr8.2 | exon | 23728575 | 23729189 | 23728575 | ID=MS.gene011649.t1.exon6;Parent=MS.gene011649.t1 |
| chr8.2 | CDS | 23728575 | 23729189 | 23728575 | ID=cds.MS.gene011649.t1;Parent=MS.gene011649.t1 |
| Gene Sequence |
| Protein sequence |
