Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011996.t1 | XP_013446409.1 | 99.5 | 185 | 1 | 0 | 1 | 185 | 1 | 185 | 1.30E-98 | 369 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011996.t1 | Q9ZPX1 | 94.6 | 185 | 10 | 0 | 1 | 185 | 1 | 185 | 4.6e-97 | 355.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011996.t1 | G7LER6 | 99.5 | 185 | 1 | 0 | 1 | 185 | 27 | 211 | 9.2e-99 | 369.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011996 | MS.gene002877 | PPI |
| MS.gene011996 | MS.gene43537 | PPI |
| MS.gene011996 | MS.gene015262 | PPI |
| MS.gene011996 | MS.gene09604 | PPI |
| MS.gene011996 | MS.gene012429 | PPI |
| MS.gene011996 | MS.gene26119 | PPI |
| MS.gene011996 | MS.gene035679 | PPI |
| MS.gene011996 | MS.gene064512 | PPI |
| MS.gene011996 | MS.gene00883 | PPI |
| MS.gene011996 | MS.gene018361 | PPI |
| MS.gene011996 | MS.gene047915 | PPI |
| MS.gene011996 | MS.gene20302 | PPI |
| MS.gene011996 | MS.gene78539 | PPI |
| MS.gene011996 | MS.gene01845 | PPI |
| MS.gene011996 | MS.gene57908 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011996.t1 | MTR_8g077540 | 99.459 | 185 | 1 | 0 | 1 | 185 | 1 | 185 | 7.94e-134 | 372 |
| MS.gene011996.t1 | MTR_8g077540 | 99.459 | 185 | 1 | 0 | 1 | 185 | 27 | 211 | 1.70e-133 | 372 |
| MS.gene011996.t1 | MTR_8g077540 | 97.414 | 116 | 3 | 0 | 1 | 116 | 1 | 116 | 6.61e-78 | 229 |
| MS.gene011996.t1 | MTR_7g109960 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.73e-52 | 166 |
| MS.gene011996.t1 | MTR_6g005820 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.79e-52 | 165 |
| MS.gene011996.t1 | MTR_5g016540 | 46.995 | 183 | 93 | 4 | 1 | 181 | 1 | 181 | 3.04e-52 | 165 |
| MS.gene011996.t1 | MTR_1g086480 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 9.05e-52 | 164 |
| MS.gene011996.t1 | MTR_5g034130 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.03e-51 | 164 |
| MS.gene011996.t1 | MTR_5g034125 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.03e-51 | 164 |
| MS.gene011996.t1 | MTR_4g128910 | 48.795 | 166 | 82 | 3 | 15 | 179 | 16 | 179 | 2.14e-49 | 158 |
| MS.gene011996.t1 | MTR_4g077640 | 45.283 | 159 | 84 | 3 | 16 | 173 | 17 | 173 | 3.56e-46 | 150 |
| MS.gene011996.t1 | MTR_5g007810 | 45.283 | 159 | 84 | 3 | 16 | 173 | 17 | 173 | 3.78e-46 | 150 |
| MS.gene011996.t1 | MTR_5g007820 | 41.667 | 168 | 93 | 4 | 16 | 180 | 17 | 182 | 3.15e-41 | 137 |
| MS.gene011996.t1 | MTR_1g076550 | 39.157 | 166 | 100 | 1 | 15 | 180 | 16 | 180 | 2.11e-40 | 135 |
| MS.gene011996.t1 | MTR_2g022200 | 42.515 | 167 | 88 | 2 | 16 | 175 | 17 | 182 | 1.08e-39 | 134 |
| MS.gene011996.t1 | MTR_5g015370 | 33.728 | 169 | 108 | 3 | 14 | 180 | 17 | 183 | 2.66e-27 | 102 |
| MS.gene011996.t1 | MTR_4g121860 | 33.714 | 175 | 105 | 1 | 14 | 177 | 18 | 192 | 1.31e-25 | 97.8 |
| MS.gene011996.t1 | MTR_2g034640 | 33.143 | 175 | 106 | 1 | 14 | 177 | 18 | 192 | 4.93e-25 | 96.3 |
| MS.gene011996.t1 | MTR_5g007840 | 31.156 | 199 | 89 | 5 | 16 | 180 | 17 | 201 | 7.25e-25 | 96.3 |
| MS.gene011996.t1 | MTR_5g078090 | 32.927 | 164 | 106 | 3 | 14 | 175 | 17 | 178 | 9.64e-25 | 95.5 |
| MS.gene011996.t1 | MTR_7g112090 | 32.000 | 175 | 108 | 1 | 14 | 177 | 18 | 192 | 1.40e-24 | 95.1 |
| MS.gene011996.t1 | MTR_4g026950 | 32.530 | 166 | 108 | 3 | 17 | 180 | 1 | 164 | 3.84e-24 | 93.2 |
| MS.gene011996.t1 | MTR_4g073560 | 46.269 | 67 | 35 | 1 | 109 | 175 | 118 | 183 | 1.36e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011996.t1 | AT2G18390 | 94.595 | 185 | 10 | 0 | 1 | 185 | 1 | 185 | 1.49e-118 | 333 |
| MS.gene011996.t1 | AT1G10630 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.83e-52 | 166 |
| MS.gene011996.t1 | AT1G10630 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.83e-52 | 166 |
| MS.gene011996.t1 | AT2G47170 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 3.22e-52 | 165 |
| MS.gene011996.t1 | AT2G47170 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 3.22e-52 | 165 |
| MS.gene011996.t1 | AT2G47170 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 3.22e-52 | 165 |
| MS.gene011996.t1 | AT5G14670 | 48.521 | 169 | 84 | 3 | 14 | 181 | 15 | 181 | 3.74e-52 | 165 |
| MS.gene011996.t1 | AT5G14670 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 8.32e-52 | 164 |
| MS.gene011996.t1 | AT5G14670 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 8.32e-52 | 164 |
| MS.gene011996.t1 | AT3G62290 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.09e-51 | 164 |
| MS.gene011996.t1 | AT3G62290 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.09e-51 | 164 |
| MS.gene011996.t1 | AT3G62290 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.09e-51 | 164 |
| MS.gene011996.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT1G23490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene011996.t1 | AT2G15310 | 45.143 | 175 | 94 | 2 | 6 | 180 | 8 | 180 | 6.53e-50 | 160 |
| MS.gene011996.t1 | AT2G24765 | 48.193 | 166 | 83 | 3 | 15 | 179 | 16 | 179 | 3.32e-49 | 157 |
| MS.gene011996.t1 | AT5G17060 | 45.000 | 160 | 85 | 3 | 15 | 173 | 16 | 173 | 7.87e-47 | 152 |
| MS.gene011996.t1 | AT5G17060 | 45.000 | 160 | 85 | 3 | 15 | 173 | 16 | 173 | 7.87e-47 | 152 |
| MS.gene011996.t1 | AT3G03120 | 44.375 | 160 | 86 | 3 | 15 | 173 | 16 | 173 | 9.36e-47 | 152 |
| MS.gene011996.t1 | AT3G22950 | 39.157 | 166 | 100 | 1 | 15 | 180 | 16 | 180 | 1.03e-40 | 136 |
| MS.gene011996.t1 | AT3G22950 | 39.157 | 166 | 100 | 1 | 15 | 180 | 16 | 180 | 1.03e-40 | 136 |
| MS.gene011996.t1 | AT2G24765 | 50.877 | 114 | 54 | 2 | 15 | 127 | 16 | 128 | 5.10e-35 | 120 |
| MS.gene011996.t1 | AT5G52210 | 37.952 | 166 | 95 | 2 | 16 | 174 | 17 | 181 | 5.18e-35 | 122 |
| MS.gene011996.t1 | AT5G52210 | 37.952 | 166 | 95 | 2 | 16 | 174 | 17 | 181 | 5.18e-35 | 122 |
| MS.gene011996.t1 | AT3G03120 | 43.966 | 116 | 63 | 2 | 15 | 129 | 16 | 130 | 6.08e-33 | 115 |
| MS.gene011996.t1 | AT1G02430 | 32.370 | 173 | 108 | 4 | 13 | 176 | 14 | 186 | 2.20e-29 | 107 |
| MS.gene011996.t1 | AT1G02440 | 32.370 | 173 | 108 | 4 | 13 | 176 | 14 | 186 | 2.45e-29 | 107 |
| MS.gene011996.t1 | AT3G49860 | 35.503 | 169 | 107 | 2 | 13 | 180 | 8 | 175 | 1.50e-28 | 105 |
| MS.gene011996.t1 | AT3G49870 | 34.320 | 169 | 107 | 3 | 14 | 180 | 17 | 183 | 1.39e-27 | 102 |
| MS.gene011996.t1 | AT5G67560 | 34.444 | 180 | 113 | 4 | 2 | 179 | 6 | 182 | 1.72e-27 | 102 |
| MS.gene011996.t1 | AT3G49870 | 34.337 | 166 | 105 | 3 | 17 | 180 | 1 | 164 | 8.87e-27 | 100 |
| MS.gene011996.t1 | AT1G56330 | 33.143 | 175 | 106 | 1 | 14 | 177 | 18 | 192 | 4.21e-25 | 96.7 |
| MS.gene011996.t1 | AT5G37680 | 35.374 | 147 | 93 | 2 | 14 | 158 | 17 | 163 | 5.85e-25 | 95.9 |
| MS.gene011996.t1 | AT3G62560 | 32.571 | 175 | 107 | 1 | 14 | 177 | 18 | 192 | 7.18e-25 | 95.9 |
| MS.gene011996.t1 | AT4G02080 | 32.571 | 175 | 107 | 1 | 14 | 177 | 18 | 192 | 1.09e-24 | 95.5 |
| MS.gene011996.t1 | AT1G09180 | 32.571 | 175 | 107 | 1 | 14 | 177 | 18 | 192 | 1.01e-22 | 90.5 |
| MS.gene011996.t1 | AT1G02430 | 31.507 | 146 | 93 | 4 | 14 | 153 | 15 | 159 | 2.36e-21 | 85.9 |
| MS.gene011996.t1 | AT5G37680 | 32.824 | 131 | 85 | 2 | 46 | 175 | 3 | 131 | 7.75e-20 | 81.3 |
| MS.gene011996.t1 | AT1G02620 | 35.780 | 109 | 59 | 1 | 80 | 177 | 13 | 121 | 2.58e-11 | 58.5 |
Find 45 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGTGGGTTGGACAATTC+AGG | 0.241231 | 8.2:-27985514 | MS.gene011996:intron |
| CTTACCTTAGCTATTTCTTC+TGG | 0.265683 | 8.2:+27982945 | None:intergenic |
| GCAAATAAACAAGATATTAA+AGG | 0.268511 | 8.2:-27982978 | MS.gene011996:CDS |
| TTCATATGACAGAGACTATC+TGG | 0.268803 | 8.2:-27983020 | MS.gene011996:intron |
| AACAGACCTCTTCCTTTAGA+AGG | 0.334759 | 8.2:+27983529 | None:intergenic |
| GAAGGAAATGCGAATTCTTA+TGG | 0.370357 | 8.2:-27985614 | MS.gene011996:CDS |
| CTTTGAGCAAACAGATGGTT+TGG | 0.372293 | 8.2:-27983613 | MS.gene011996:CDS |
| AGCAAACAGATGGTTTGGTT+TGG | 0.382912 | 8.2:-27983608 | MS.gene011996:CDS |
| TTTATTTGCTAGAATTAGTA+AGG | 0.393701 | 8.2:+27982992 | None:intergenic |
| GCAGGTACACTCTAAACATA+TGG | 0.396228 | 8.2:-27983680 | MS.gene011996:intron |
| GCAAACAGATGGTTTGGTTT+GGG | 0.400753 | 8.2:-27983607 | MS.gene011996:CDS |
| AAGATTGGATGATTGCAAAA+TGG | 0.416311 | 8.2:-27983562 | MS.gene011996:CDS |
| ACTGGTGAGGGCTTGCTTGA+GGG | 0.425615 | 8.2:-27982018 | MS.gene011996:CDS |
| GGGATTTGATTGGTTGGTCC+AGG | 0.450854 | 8.2:-27981998 | MS.gene011996:CDS |
| AACTGCGCAGGTGTTGAACT+TGG | 0.453484 | 8.2:-27982091 | MS.gene011996:intron |
| GCTTGCTTGAGGGATTTGAT+TGG | 0.453614 | 8.2:-27982008 | MS.gene011996:CDS |
| GCTTGAGGGATTTGATTGGT+TGG | 0.472113 | 8.2:-27982004 | MS.gene011996:CDS |
| TAGCTATTTCTTCTGGTGCA+AGG | 0.473584 | 8.2:+27982952 | None:intergenic |
| CAGTTCGGATCTGAGAAGAT+TGG | 0.474805 | 8.2:-27983577 | MS.gene011996:CDS |
| TGGGTCTTCTCAGCATCATT+CGG | 0.490641 | 8.2:-27985654 | MS.gene011996:CDS |
| GCAGTGGGTTGGACAATTCA+GGG | 0.493312 | 8.2:-27985513 | MS.gene011996:intron |
| AGCTATTTCTTCTGGTGCAA+GGG | 0.494608 | 8.2:+27982953 | None:intergenic |
| GGTTTGGGTAGTTGACAGTT+CGG | 0.497651 | 8.2:-27983592 | MS.gene011996:CDS |
| CACTGGTGAGGGCTTGCTTG+AGG | 0.504277 | 8.2:-27982019 | MS.gene011996:CDS |
| ACTCTAAACATATGGGATGT+TGG | 0.508762 | 8.2:-27983672 | MS.gene011996:CDS |
| TCTCGACACTGGATGATAGT+TGG | 0.513687 | 8.2:-27982054 | MS.gene011996:CDS |
| GGAGCTAGATAACCTTCTAA+AGG | 0.521958 | 8.2:-27983541 | MS.gene011996:CDS |
| GAAAATTAAGAAGAAGGAGA+AGG | 0.526706 | 8.2:-27985632 | MS.gene011996:CDS |
| AGCGTCATCAGTCCTACCCT+TGG | 0.534533 | 8.2:-27985451 | MS.gene011996:CDS |
| AGATAACCTTCTAAAGGAAG+AGG | 0.535139 | 8.2:-27983535 | MS.gene011996:intron |
| AACTACTTTGAGCAAACAGA+TGG | 0.544724 | 8.2:-27983618 | MS.gene011996:CDS |
| CATTCGGAAAATTAAGAAGA+AGG | 0.545987 | 8.2:-27985638 | MS.gene011996:CDS |
| GTTTCTCCAGTAAGATCGAA+TGG | 0.552560 | 8.2:+27983638 | None:intergenic |
| GGTGTTGAACTTGGAAGCGA+TGG | 0.561088 | 8.2:-27982082 | MS.gene011996:CDS |
| GCAATTGTTATGCAGTGGGT+TGG | 0.563288 | 8.2:-27985524 | MS.gene011996:intron |
| AGATTCTAGAGGCTATGTCC+TGG | 0.564870 | 8.2:+27981980 | None:intergenic |
| CTGTAGTGCGTACACTGGTG+AGG | 0.567647 | 8.2:-27982031 | MS.gene011996:CDS |
| CTAAACATATGGGATGTTGG+AGG | 0.581978 | 8.2:-27983669 | MS.gene011996:CDS |
| CAGGTACACTCTAAACATAT+GGG | 0.585114 | 8.2:-27983679 | MS.gene011996:CDS |
| TGCACCAGAAGAAATAGCTA+AGG | 0.599602 | 8.2:-27982949 | MS.gene011996:intron |
| TTGATGTTGAATCCAAGGGT+AGG | 0.603177 | 8.2:+27985439 | None:intergenic |
| TGTAGTGCGTACACTGGTGA+GGG | 0.614788 | 8.2:-27982030 | MS.gene011996:CDS |
| CGATGGATAAATCTCGACAC+TGG | 0.617621 | 8.2:-27982065 | MS.gene011996:CDS |
| GTCGAGCAAGTAGATTCTAG+AGG | 0.639725 | 8.2:+27981969 | None:intergenic |
| GTTGGCTGTAGTGCGTACAC+TGG | 0.644179 | 8.2:-27982036 | MS.gene011996:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATAATCTAACAT+TGG | - | chr8.2:27983234-27983253 | MS.gene011996:intron | 10.0% |
| !!! | TAAATATATTACTTTTGTTT+TGG | - | chr8.2:27983803-27983822 | MS.gene011996:intron | 10.0% |
| !! | CAAATAAATAAATTGAAAGT+TGG | + | chr8.2:27985313-27985332 | None:intergenic | 15.0% |
| !!! | TAATATACTTTTGTTTTATG+AGG | - | chr8.2:27982422-27982441 | MS.gene011996:intron | 15.0% |
| !!! | TTAATTCTTTTTAACGAAAA+TGG | + | chr8.2:27983213-27983232 | None:intergenic | 15.0% |
| !!! | TTCATTTTTATGACAATATA+TGG | - | chr8.2:27985205-27985224 | MS.gene011996:intron | 15.0% |
| !!! | TTTTTTTTCTTTAAATGCTT+TGG | - | chr8.2:27982501-27982520 | MS.gene011996:intron | 15.0% |
| !! | AAAATAACTAAAGATTGCTT+TGG | + | chr8.2:27984433-27984452 | None:intergenic | 20.0% |
| !! | AATCAACAGATCAAATAAAA+GGG | + | chr8.2:27984218-27984237 | None:intergenic | 20.0% |
| !! | ACTTCTCATTGTTAATAATT+TGG | - | chr8.2:27984504-27984523 | MS.gene011996:intron | 20.0% |
| !! | AGAAAAATAAAAATGGACAT+CGG | + | chr8.2:27982288-27982307 | None:intergenic | 20.0% |
| !! | ATGTACATAAAAAAATACGT+AGG | - | chr8.2:27985054-27985073 | MS.gene011996:intron | 20.0% |
| !! | CTTCTCATTGTTAATAATTT+GGG | - | chr8.2:27984505-27984524 | MS.gene011996:intron | 20.0% |
| !! | GCAAATAAACAAGATATTAA+AGG | - | chr8.2:27984643-27984662 | MS.gene011996:intron | 20.0% |
| !! | TAATCAACAGATCAAATAAA+AGG | + | chr8.2:27984219-27984238 | None:intergenic | 20.0% |
| !! | TCAAAATAAAACAATCTCAT+CGG | + | chr8.2:27984562-27984581 | None:intergenic | 20.0% |
| !!! | GATATTCAGTAATTTTCTTA+AGG | - | chr8.2:27984177-27984196 | MS.gene011996:intron | 20.0% |
| !!! | TATGTTAAGTCATCATTTTT+AGG | - | chr8.2:27982319-27982338 | MS.gene011996:intron | 20.0% |
| !!! | TCTGTTTTTCTGATTTTTTT+GGG | - | chr8.2:27983110-27983129 | MS.gene011996:intron | 20.0% |
| !!! | TTCTGTTTTTCTGATTTTTT+TGG | - | chr8.2:27983109-27983128 | MS.gene011996:intron | 20.0% |
| !!! | TTTATTTGCTAGAATTAGTA+AGG | + | chr8.2:27984632-27984651 | None:intergenic | 20.0% |
| ! | AAAATGGTCAAGATTACAAT+TGG | + | chr8.2:27983197-27983216 | None:intergenic | 25.0% |
| ! | AAACATAATATGCTGAGAAT+TGG | - | chr8.2:27984754-27984773 | MS.gene011996:intron | 25.0% |
| ! | AAATGGTCAAGATTACAATT+GGG | + | chr8.2:27983196-27983215 | None:intergenic | 25.0% |
| ! | CTAAGCGTAAAAATTAACTA+AGG | - | chr8.2:27985398-27985417 | MS.gene011996:intron | 25.0% |
| ! | CTATTAAACAAACCTATTTG+TGG | - | chr8.2:27984915-27984934 | MS.gene011996:intron | 25.0% |
| ! | GCAAACGAGAAAAATAAAAA+TGG | + | chr8.2:27982295-27982314 | None:intergenic | 25.0% |
| ! | TAAATGCACAAGTTATCATA+AGG | + | chr8.2:27984378-27984397 | None:intergenic | 25.0% |
| ! | TAAGAAACTAGGTAAAACAA+AGG | + | chr8.2:27982592-27982611 | None:intergenic | 25.0% |
| ! | TACATCTAAATACTTAACTG+AGG | - | chr8.2:27984155-27984174 | MS.gene011996:intron | 25.0% |
| ! | TACTTGTCAACATAATAGAT+TGG | - | chr8.2:27984131-27984150 | MS.gene011996:intron | 25.0% |
| ! | TCAAATATTTGTAGGGATAA+GGG | + | chr8.2:27983381-27983400 | None:intergenic | 25.0% |
| ! | TGATGTAATAACACATACAT+AGG | - | chr8.2:27985142-27985161 | MS.gene011996:intron | 25.0% |
| ! | TGTGATATTGCTTCTTAATT+TGG | - | chr8.2:27982452-27982471 | MS.gene011996:intron | 25.0% |
| ! | TTATCTTAATAACTACTCGT+CGG | - | chr8.2:27984872-27984891 | MS.gene011996:intron | 25.0% |
| !! | AAGGTAAGCTTAATTTTATC+TGG | - | chr8.2:27984691-27984710 | MS.gene011996:intron | 25.0% |
| !! | AGGTAAGCTTAATTTTATCT+GGG | - | chr8.2:27984692-27984711 | MS.gene011996:intron | 25.0% |
| !! | GCTTTTATCTAAATTGACAA+TGG | - | chr8.2:27983919-27983938 | MS.gene011996:intron | 25.0% |
| !! | TAAAATTAGAGTGATTTGTG+AGG | + | chr8.2:27982249-27982268 | None:intergenic | 25.0% |
| !! | TATTGCTTCTTAATTTGGTA+CGG | - | chr8.2:27982457-27982476 | MS.gene011996:intron | 25.0% |
| !! | TCGAGTCTTTTATGTTTAAT+TGG | - | chr8.2:27983756-27983775 | MS.gene011996:intron | 25.0% |
| !! | TGTAGTAAAATCTAGAATGA+TGG | + | chr8.2:27982057-27982076 | None:intergenic | 25.0% |
| !!! | ACAATCGTTTTGAAGATTAA+CGG | - | chr8.2:27982137-27982156 | MS.gene011996:intron | 25.0% |
| !!! | AGTCATCATTTTTAGGAATT+AGG | - | chr8.2:27982326-27982345 | MS.gene011996:intron | 25.0% |
| !!! | ATTCCTAAAGCATTCATTTT+AGG | + | chr8.2:27984291-27984310 | None:intergenic | 25.0% |
| !!! | GGCTTTATAATAAAGTTTTG+CGG | - | chr8.2:27983538-27983557 | MS.gene011996:CDS | 25.0% |
| !!! | TTGTTTTACCTAGTTTCTTA+CGG | - | chr8.2:27982592-27982611 | MS.gene011996:intron | 25.0% |
| AAAAAACCATTCGATCTTAC+TGG | - | chr8.2:27983977-27983996 | MS.gene011996:intron | 30.0% | |
| AAATTATACCTGAACCACAA+TGG | - | chr8.2:27985439-27985458 | MS.gene011996:CDS | 30.0% | |
| AAGATTGGATGATTGCAAAA+TGG | - | chr8.2:27984059-27984078 | MS.gene011996:intron | 30.0% | |
| AATTATACCTGAACCACAAT+GGG | - | chr8.2:27985440-27985459 | MS.gene011996:CDS | 30.0% | |
| ATCTTCAATAATGTGACCAA+AGG | - | chr8.2:27982789-27982808 | MS.gene011996:intron | 30.0% | |
| ATGATTACTCTGTTCTTCTT+TGG | - | chr8.2:27984536-27984555 | MS.gene011996:intron | 30.0% | |
| ATTTGTAGAAAAGACACATC+GGG | + | chr8.2:27982881-27982900 | None:intergenic | 30.0% | |
| CAATTTAGATAAAAGCCTCA+AGG | + | chr8.2:27983915-27983934 | None:intergenic | 30.0% | |
| CATATAAAATGATGCAGGTT+AGG | - | chr8.2:27984989-27985008 | MS.gene011996:intron | 30.0% | |
| CATTCGGAAAATTAAGAAGA+AGG | - | chr8.2:27981983-27982002 | MS.gene011996:CDS | 30.0% | |
| CATTTGTAGAAAAGACACAT+CGG | + | chr8.2:27982882-27982901 | None:intergenic | 30.0% | |
| CTCAAATATTTGTAGGGATA+AGG | + | chr8.2:27983382-27983401 | None:intergenic | 30.0% | |
| CTTGATACTCTTTAACTAGA+CGG | - | chr8.2:27984797-27984816 | MS.gene011996:intron | 30.0% | |
| GAAAATTAAGAAGAAGGAGA+AGG | - | chr8.2:27981989-27982008 | MS.gene011996:CDS | 30.0% | |
| GACTACATATAAAATGATGC+AGG | - | chr8.2:27984984-27985003 | MS.gene011996:intron | 30.0% | |
| GGTCAAACTAATTATCTCTT+GGG | - | chr8.2:27985461-27985480 | MS.gene011996:CDS | 30.0% | |
| GTATGTTAAGGTAGATACTT+GGG | - | chr8.2:27982922-27982941 | MS.gene011996:intron | 30.0% | |
| TAAAAACTATTTCCCCAACA+AGG | + | chr8.2:27984401-27984420 | None:intergenic | 30.0% | |
| TAACAAAGAGTCGTATCTAA+AGG | + | chr8.2:27985017-27985036 | None:intergenic | 30.0% | |
| TAGAAAGCAACATTTCCTAT+AGG | + | chr8.2:27984898-27984917 | None:intergenic | 30.0% | |
| TATGTTAAGGTAGATACTTG+GGG | - | chr8.2:27982923-27982942 | MS.gene011996:intron | 30.0% | |
| TCTTCAATAATGTGACCAAA+GGG | - | chr8.2:27982790-27982809 | MS.gene011996:intron | 30.0% | |
| TGATCTTGCATATTGTGTAA+TGG | + | chr8.2:27982553-27982572 | None:intergenic | 30.0% | |
| TGCATATTGTGTAATGGTAA+AGG | + | chr8.2:27982547-27982566 | None:intergenic | 30.0% | |
| TGTATGTTAAGGTAGATACT+TGG | - | chr8.2:27982921-27982940 | MS.gene011996:intron | 30.0% | |
| TTAAACAAACCTATTTGTGG+CGG | - | chr8.2:27984918-27984937 | MS.gene011996:intron | 30.0% | |
| TTATCTAAATTGACAATGGC+AGG | - | chr8.2:27983923-27983942 | MS.gene011996:intron | 30.0% | |
| TTGATACTCTTTAACTAGAC+GGG | - | chr8.2:27984798-27984817 | MS.gene011996:intron | 30.0% | |
| TTGCCTAAAATGAATGCTTT+AGG | - | chr8.2:27984285-27984304 | MS.gene011996:intron | 30.0% | |
| TTGGTATGATTCTTCAATCT+GGG | - | chr8.2:27983822-27983841 | MS.gene011996:intron | 30.0% | |
| TTTGGTATGATTCTTCAATC+TGG | - | chr8.2:27983821-27983840 | MS.gene011996:intron | 30.0% | |
| ! | ATAATTAGTTTGACCCATTG+TGG | + | chr8.2:27985456-27985475 | None:intergenic | 30.0% |
| ! | ATGAAGAGAAGTTTTACTTC+TGG | + | chr8.2:27982220-27982239 | None:intergenic | 30.0% |
| ! | TATGTTTAAGCTTTGTGACT+AGG | - | chr8.2:27983677-27983696 | MS.gene011996:CDS | 30.0% |
| ! | TGAGTAACAAAAAAGTGTGT+CGG | - | chr8.2:27982706-27982725 | MS.gene011996:intron | 30.0% |
| !! | CAATGAGAAGTATTTATAGC+TGG | + | chr8.2:27984495-27984514 | None:intergenic | 30.0% |
| !! | GAAGTATTTATAGCTGGTTT+TGG | + | chr8.2:27984489-27984508 | None:intergenic | 30.0% |
| !! | TCTAGTTAAAGAGTATCAAG+TGG | + | chr8.2:27984797-27984816 | None:intergenic | 30.0% |
| !!! | AATCGTTTTGAAGATTAACG+GGG | - | chr8.2:27982139-27982158 | MS.gene011996:intron | 30.0% |
| !!! | AGTAAGATCGAATGGTTTTT+TGG | + | chr8.2:27983978-27983997 | None:intergenic | 30.0% |
| !!! | CAATCGTTTTGAAGATTAAC+GGG | - | chr8.2:27982138-27982157 | MS.gene011996:intron | 30.0% |
| !!! | CACTAAATGTCATTTTTCGT+AGG | + | chr8.2:27983299-27983318 | None:intergenic | 30.0% |
| !!! | GTTTTTCTGATTTTTTTGGG+TGG | - | chr8.2:27983113-27983132 | MS.gene011996:intron | 30.0% |
| AAAACAGAAACAGATGCACA+AGG | + | chr8.2:27983098-27983117 | None:intergenic | 35.0% | |
| AAACAACAACACAGGAGAAA+AGG | + | chr8.2:27983481-27983500 | None:intergenic | 35.0% | |
| AACAATGACCGTAAGAAACT+AGG | + | chr8.2:27982603-27982622 | None:intergenic | 35.0% | |
| AACTACTTTGAGCAAACAGA+TGG | - | chr8.2:27984003-27984022 | MS.gene011996:intron | 35.0% | |
| AACTTGTGCATTTACCTTGT+TGG | - | chr8.2:27984384-27984403 | MS.gene011996:intron | 35.0% | |
| ACTCTAAACATATGGGATGT+TGG | - | chr8.2:27983949-27983968 | MS.gene011996:intron | 35.0% | |
| ACTTCTCTTGAAGTTATCCA+GGG | + | chr8.2:27985234-27985253 | None:intergenic | 35.0% | |
| ACTTGTGCATTTACCTTGTT+GGG | - | chr8.2:27984385-27984404 | MS.gene011996:intron | 35.0% | |
| AGAGGTCTGTTCAATACAAA+TGG | - | chr8.2:27984104-27984123 | MS.gene011996:intron | 35.0% | |
| AGTTGCAATTGTTATGCAGT+GGG | - | chr8.2:27982093-27982112 | MS.gene011996:intron | 35.0% | |
| ATATTTACCAATGCCTTCAG+TGG | - | chr8.2:27984309-27984328 | MS.gene011996:intron | 35.0% | |
| ATCCTAGGGATTGTATGTTA+AGG | - | chr8.2:27982910-27982929 | MS.gene011996:intron | 35.0% | |
| ATGACAATATATGGAAACCC+TGG | - | chr8.2:27985214-27985233 | MS.gene011996:intron | 35.0% | |
| ATGTTAAGGTAGATACTTGG+GGG | - | chr8.2:27982924-27982943 | MS.gene011996:intron | 35.0% | |
| ATTCACAATCCAGATCGTTA+GGG | + | chr8.2:27982679-27982698 | None:intergenic | 35.0% | |
| CAGGTACACTCTAAACATAT+GGG | - | chr8.2:27983942-27983961 | MS.gene011996:intron | 35.0% | |
| CATACATACCACAAAGAACA+TGG | + | chr8.2:27984965-27984984 | None:intergenic | 35.0% | |
| CTTCAATAATGTGACCAAAG+GGG | - | chr8.2:27982791-27982810 | MS.gene011996:intron | 35.0% | |
| GAAGGAAATGCGAATTCTTA+TGG | - | chr8.2:27982007-27982026 | MS.gene011996:CDS | 35.0% | |
| GCACAAGTTATCATAAGGAA+AGG | + | chr8.2:27984373-27984392 | None:intergenic | 35.0% | |
| GGGTCAAACTAATTATCTCT+TGG | - | chr8.2:27985460-27985479 | MS.gene011996:CDS | 35.0% | |
| GTAAGTGTCTATTTGTCTGT+AGG | + | chr8.2:27983277-27983296 | None:intergenic | 35.0% | |
| GTCATAATTATCTTCCTGCA+AGG | - | chr8.2:27984843-27984862 | MS.gene011996:intron | 35.0% | |
| TACCTTAACATACAATCCCT+AGG | + | chr8.2:27982915-27982934 | None:intergenic | 35.0% | |
| TAGTTGCAATTGTTATGCAG+TGG | - | chr8.2:27982092-27982111 | MS.gene011996:intron | 35.0% | |
| TATTCACAATCCAGATCGTT+AGG | + | chr8.2:27982680-27982699 | None:intergenic | 35.0% | |
| TATTTGGCATGCTACCATTT+GGG | - | chr8.2:27982740-27982759 | MS.gene011996:intron | 35.0% | |
| TCTGTTGAAACATTACTGCA+AGG | + | chr8.2:27985269-27985288 | None:intergenic | 35.0% | |
| TTATTTGGCATGCTACCATT+TGG | - | chr8.2:27982739-27982758 | MS.gene011996:intron | 35.0% | |
| TTCATATGACAGAGACTATC+TGG | - | chr8.2:27984601-27984620 | MS.gene011996:intron | 35.0% | |
| ! | ACGTTTTCATCATATTTCGC+AGG | + | chr8.2:27983597-27983616 | None:intergenic | 35.0% |
| ! | AGAGAAGTTTTACTTCTGGT+AGG | + | chr8.2:27982216-27982235 | None:intergenic | 35.0% |
| ! | AGATAACCTTCTAAAGGAAG+AGG | - | chr8.2:27984086-27984105 | MS.gene011996:intron | 35.0% |
| ! | AGGGATAAGGGTATAATTGT+TGG | + | chr8.2:27983369-27983388 | None:intergenic | 35.0% |
| ! | AGTAACAAAAAAGTGTGTCG+GGG | - | chr8.2:27982708-27982727 | MS.gene011996:intron | 35.0% |
| ! | CGATGTGTCTTTTCTACAAA+TGG | - | chr8.2:27982880-27982899 | MS.gene011996:intron | 35.0% |
| ! | CGTTTTCATCATATTTCGCA+GGG | + | chr8.2:27983596-27983615 | None:intergenic | 35.0% |
| ! | GAGTAACAAAAAAGTGTGTC+GGG | - | chr8.2:27982707-27982726 | MS.gene011996:intron | 35.0% |
| ! | GGATAAGGGTATAATTGTTG+GGG | + | chr8.2:27983367-27983386 | None:intergenic | 35.0% |
| ! | GGGATAAGGGTATAATTGTT+GGG | + | chr8.2:27983368-27983387 | None:intergenic | 35.0% |
| ! | GTCTTTTCTACAAATGGTGT+TGG | - | chr8.2:27982886-27982905 | MS.gene011996:intron | 35.0% |
| ! | TGTGAATAAGAACGTGCTTT+TGG | - | chr8.2:27982352-27982371 | MS.gene011996:intron | 35.0% |
| ! | TTCTTAATTTGGTACGGTTG+TGG | - | chr8.2:27982463-27982482 | MS.gene011996:intron | 35.0% |
| ! | TTTTAGGCAACTACTATGCT+TGG | + | chr8.2:27984275-27984294 | None:intergenic | 35.0% |
| !! | CTTACCTTAGCTATTTCTTC+TGG | + | chr8.2:27984679-27984698 | None:intergenic | 35.0% |
| !! | GGTTTTGATGTTGAATCCAA+GGG | + | chr8.2:27982189-27982208 | None:intergenic | 35.0% |
| !! | GTTTTCGGATCCTTTTGTTT+TGG | - | chr8.2:27982966-27982985 | MS.gene011996:CDS | 35.0% |
| !! | TAGCTGTTTTCGTGAAACAA+GGG | - | chr8.2:27985372-27985391 | MS.gene011996:intron | 35.0% |
| !! | TTAGCTGTTTTCGTGAAACA+AGG | - | chr8.2:27985371-27985390 | MS.gene011996:intron | 35.0% |
| !!! | GACACACTTTTTTGTTACTC+AGG | + | chr8.2:27982707-27982726 | None:intergenic | 35.0% |
| !!! | TCTGATTTTTTTGGGTGGTT+TGG | - | chr8.2:27983118-27983137 | MS.gene011996:intron | 35.0% |
| !!! | TGGTTTTGATGTTGAATCCA+AGG | + | chr8.2:27982190-27982209 | None:intergenic | 35.0% |
| AACAGACCTCTTCCTTTAGA+AGG | + | chr8.2:27984095-27984114 | None:intergenic | 40.0% | |
| AACATAAACGACTCAAAGCC+AGG | + | chr8.2:27983663-27983682 | None:intergenic | 40.0% | |
| AGATCTTGCATCAGATCGAA+TGG | + | chr8.2:27983880-27983899 | None:intergenic | 40.0% | |
| ATCTTGCATCAGATCGAATG+GGG | + | chr8.2:27983878-27983897 | None:intergenic | 40.0% | |
| CAATTGGGCCTCTAAATTGT+AGG | + | chr8.2:27983181-27983200 | None:intergenic | 40.0% | |
| CACTTCTCTTGAAGTTATCC+AGG | + | chr8.2:27985235-27985254 | None:intergenic | 40.0% | |
| CTAAACATATGGGATGTTGG+AGG | - | chr8.2:27983952-27983971 | MS.gene011996:intron | 40.0% | |
| CTTGTGCATTTACCTTGTTG+GGG | - | chr8.2:27984386-27984405 | MS.gene011996:intron | 40.0% | |
| CTTTGAGCAAACAGATGGTT+TGG | - | chr8.2:27984008-27984027 | MS.gene011996:intron | 40.0% | |
| GAAAGGAAAGTAGCTGCTAA+CGG | + | chr8.2:27984356-27984375 | None:intergenic | 40.0% | |
| GAGTGAAATCGCTAAATCGA+GGG | + | chr8.2:27982654-27982673 | None:intergenic | 40.0% | |
| GATCTTGCATCAGATCGAAT+GGG | + | chr8.2:27983879-27983898 | None:intergenic | 40.0% | |
| GCAGGTACACTCTAAACATA+TGG | - | chr8.2:27983941-27983960 | MS.gene011996:intron | 40.0% | |
| GCTCTTTCACTTCTTGTTAG+GGG | - | chr8.2:27983513-27983532 | MS.gene011996:intron | 40.0% | |
| GCTGTTAACCATGTTCTTTG+TGG | - | chr8.2:27984954-27984973 | MS.gene011996:intron | 40.0% | |
| GCTTGGATACATTAGCAAAG+AGG | + | chr8.2:27984258-27984277 | None:intergenic | 40.0% | |
| GGAGCTAGATAACCTTCTAA+AGG | - | chr8.2:27984080-27984099 | MS.gene011996:intron | 40.0% | |
| GGCCTCTAAATTGTAGGAAA+CGG | + | chr8.2:27983175-27983194 | None:intergenic | 40.0% | |
| GGCTCTTTCACTTCTTGTTA+GGG | - | chr8.2:27983512-27983531 | MS.gene011996:intron | 40.0% | |
| GTAGACAATCTCATCTAGCA+AGG | + | chr8.2:27985111-27985130 | None:intergenic | 40.0% | |
| GTTTCTCCAGTAAGATCGAA+TGG | + | chr8.2:27983986-27984005 | None:intergenic | 40.0% | |
| TAATGTGACCAAAGGGGTTA+AGG | - | chr8.2:27982797-27982816 | MS.gene011996:intron | 40.0% | |
| TAGCTGCTAACGGAATAAAC+AGG | + | chr8.2:27984346-27984365 | None:intergenic | 40.0% | |
| TCTTGATTCTGACAACCTTG+AGG | - | chr8.2:27983897-27983916 | MS.gene011996:intron | 40.0% | |
| TGAGTGAAATCGCTAAATCG+AGG | + | chr8.2:27982655-27982674 | None:intergenic | 40.0% | |
| TGCACCAGAAGAAATAGCTA+AGG | - | chr8.2:27984672-27984691 | MS.gene011996:intron | 40.0% | |
| TTCACAATCCAGATCGTTAG+GGG | + | chr8.2:27982678-27982697 | None:intergenic | 40.0% | |
| TTGATGTTGAATCCAAGGGT+AGG | + | chr8.2:27982185-27982204 | None:intergenic | 40.0% | |
| TTGTGGCGGTAAACAAGATA+CGG | - | chr8.2:27984932-27984951 | MS.gene011996:intron | 40.0% | |
| TTTCACTTCTTGTTAGGGGT+TGG | - | chr8.2:27983517-27983536 | MS.gene011996:intron | 40.0% | |
| ! | ACAAATGGTGTTGGAATCCT+AGG | - | chr8.2:27982895-27982914 | MS.gene011996:intron | 40.0% |
| ! | AGCTTTTCACAACACCCAAA+TGG | + | chr8.2:27982757-27982776 | None:intergenic | 40.0% |
| ! | ATTTTATCTGGGCCTGATCT+TGG | - | chr8.2:27984703-27984722 | MS.gene011996:intron | 40.0% |
| ! | CAAATGGTGTTGGAATCCTA+GGG | - | chr8.2:27982896-27982915 | MS.gene011996:intron | 40.0% |
| ! | CTAGAATGATGGAGAGAACA+GGG | + | chr8.2:27982046-27982065 | None:intergenic | 40.0% |
| ! | GTTTTACTTCTGGTAGGTGA+TGG | + | chr8.2:27982210-27982229 | None:intergenic | 40.0% |
| ! | TCTAGAATGATGGAGAGAAC+AGG | + | chr8.2:27982047-27982066 | None:intergenic | 40.0% |
| ! | TCTTGTTTACCGCCACAAAT+AGG | + | chr8.2:27984930-27984949 | None:intergenic | 40.0% |
| !! | AAAAAGTGTGTCGGGGTTTT+TGG | - | chr8.2:27982715-27982734 | MS.gene011996:intron | 40.0% |
| !! | AGATACTTGGGGGTATGTTT+TGG | - | chr8.2:27982934-27982953 | MS.gene011996:intron | 40.0% |
| !! | AGCAAACAGATGGTTTGGTT+TGG | - | chr8.2:27984013-27984032 | MS.gene011996:intron | 40.0% |
| !! | AGCTATTTCTTCTGGTGCAA+GGG | + | chr8.2:27984671-27984690 | None:intergenic | 40.0% |
| !! | ATACTTGGGGGTATGTTTTG+GGG | - | chr8.2:27982936-27982955 | MS.gene011996:intron | 40.0% |
| !! | GATACTTGGGGGTATGTTTT+GGG | - | chr8.2:27982935-27982954 | MS.gene011996:intron | 40.0% |
| !! | GCAAACAGATGGTTTGGTTT+GGG | - | chr8.2:27984014-27984033 | MS.gene011996:intron | 40.0% |
| !! | TAGCTATTTCTTCTGGTGCA+AGG | + | chr8.2:27984672-27984691 | None:intergenic | 40.0% |
| !!! | TTTTGGGGAGTTGCTGTTTT+CGG | - | chr8.2:27982951-27982970 | MS.gene011996:CDS | 40.0% |
| !!! | TTTTTTGGGTGGTTTGGCTT+AGG | - | chr8.2:27983124-27983143 | MS.gene011996:intron | 40.0% |
| AACAACACAGGAGAAAAGGC+CGG | + | chr8.2:27983477-27983496 | None:intergenic | 45.0% | |
| AGCTAGGCCTCCAATTTATG+GGG | + | chr8.2:27983408-27983427 | None:intergenic | 45.0% | |
| AGGACATTAAGGTGATGTCG+TGG | - | chr8.2:27982829-27982848 | MS.gene011996:intron | 45.0% | |
| AGTTTGACCCATTGTGGTTC+AGG | + | chr8.2:27985450-27985469 | None:intergenic | 45.0% | |
| ATAACTACTCGTCGGCCTAT+AGG | - | chr8.2:27984880-27984899 | MS.gene011996:intron | 45.0% | |
| ATTTGAGCCCCCCCATAAAT+TGG | - | chr8.2:27983395-27983414 | MS.gene011996:intron | 45.0% | |
| CAAAGGGGTTAAGGAATTGG+TGG | - | chr8.2:27982806-27982825 | MS.gene011996:intron | 45.0% | |
| CACCAATTCCTTAACCCCTT+TGG | + | chr8.2:27982808-27982827 | None:intergenic | 45.0% | |
| CAGCATGGCACCAAAACAAA+AGG | + | chr8.2:27982979-27982998 | None:intergenic | 45.0% | |
| CAGTTCGGATCTGAGAAGAT+TGG | - | chr8.2:27984044-27984063 | MS.gene011996:intron | 45.0% | |
| CCAGGATCGTTAGAATCGTA+TGG | + | chr8.2:27983645-27983664 | None:intergenic | 45.0% | |
| CCATACGATTCTAACGATCC+TGG | - | chr8.2:27983642-27983661 | MS.gene011996:CDS | 45.0% | |
| CGATGGATAAATCTCGACAC+TGG | - | chr8.2:27985556-27985575 | MS.gene011996:intron | 45.0% | |
| CGGCTCTTTCACTTCTTGTT+AGG | - | chr8.2:27983511-27983530 | MS.gene011996:intron | 45.0% | |
| GACCAAAGGGGTTAAGGAAT+TGG | - | chr8.2:27982803-27982822 | MS.gene011996:intron | 45.0% | |
| GAGCTAGGCCTCCAATTTAT+GGG | + | chr8.2:27983409-27983428 | None:intergenic | 45.0% | |
| GCAATTGTTATGCAGTGGGT+TGG | - | chr8.2:27982097-27982116 | MS.gene011996:intron | 45.0% | |
| GCTTGAGGGATTTGATTGGT+TGG | - | chr8.2:27985617-27985636 | MS.gene011996:CDS | 45.0% | |
| GCTTGCTTGAGGGATTTGAT+TGG | - | chr8.2:27985613-27985632 | MS.gene011996:CDS | 45.0% | |
| GGAATTGGTGGAGGACATTA+AGG | - | chr8.2:27982818-27982837 | MS.gene011996:intron | 45.0% | |
| GGACATTAAGGTGATGTCGT+GGG | - | chr8.2:27982830-27982849 | MS.gene011996:intron | 45.0% | |
| GGCCGTTTCCTACAATTTAG+AGG | - | chr8.2:27983170-27983189 | MS.gene011996:intron | 45.0% | |
| GGGCACAAAAACAACAACAC+AGG | + | chr8.2:27983489-27983508 | None:intergenic | 45.0% | |
| GGGGGGCTCAAATATTTGTA+GGG | + | chr8.2:27983388-27983407 | None:intergenic | 45.0% | |
| GGGTATAATTGTTGGGGTGT+AGG | + | chr8.2:27983361-27983380 | None:intergenic | 45.0% | |
| GGTTTGGGTAGTTGACAGTT+CGG | - | chr8.2:27984029-27984048 | MS.gene011996:intron | 45.0% | |
| GTCGAGCAAGTAGATTCTAG+AGG | + | chr8.2:27985655-27985674 | None:intergenic | 45.0% | |
| TAAATTGTAGGAAACGGCCC+TGG | + | chr8.2:27983169-27983188 | None:intergenic | 45.0% | |
| TAAGATAAGTGCAGCCTTGC+AGG | + | chr8.2:27984860-27984879 | None:intergenic | 45.0% | |
| TCGCAGGGATTTACTCAACT+CGG | + | chr8.2:27983581-27983600 | None:intergenic | 45.0% | |
| TCTCGACACTGGATGATAGT+TGG | - | chr8.2:27985567-27985586 | MS.gene011996:intron | 45.0% | |
| TGGGTCTTCTCAGCATCATT+CGG | - | chr8.2:27981967-27981986 | MS.gene011996:CDS | 45.0% | |
| TTAAGGTGATGTCGTGGGAA+TGG | - | chr8.2:27982835-27982854 | MS.gene011996:intron | 45.0% | |
| ! | AGATTCTAGAGGCTATGTCC+TGG | + | chr8.2:27985644-27985663 | None:intergenic | 45.0% |
| ! | AGGGTTTTCGCGATTCTGAT+CGG | + | chr8.2:27982635-27982654 | None:intergenic | 45.0% |
| !! | GGATTTGCTGTATCCACTGA+AGG | + | chr8.2:27984325-27984344 | None:intergenic | 45.0% |
| !!! | CGTTTTGAAGATTAACGGGG+AGG | - | chr8.2:27982142-27982161 | MS.gene011996:intron | 45.0% |
| !!! | GTCGGGGTTTTTGGCTTATT+TGG | - | chr8.2:27982724-27982743 | MS.gene011996:intron | 45.0% |
| !!! | GTTGTTGTTTTTGTGCCCAG+CGG | - | chr8.2:27983491-27983510 | MS.gene011996:intron | 45.0% |
| !!! | GTTTTGGTGCCATGCTGTTT+TGG | - | chr8.2:27982982-27983001 | MS.gene011996:CDS | 45.0% |
| ACAAGAAGTGAAAGAGCCGC+TGG | + | chr8.2:27983510-27983529 | None:intergenic | 50.0% | |
| AGGGGTTAAGGAATTGGTGG+AGG | - | chr8.2:27982809-27982828 | MS.gene011996:intron | 50.0% | |
| CAAGAAGTGAAAGAGCCGCT+GGG | + | chr8.2:27983509-27983528 | None:intergenic | 50.0% | |
| CCTGCGAAGTTACCAAGATC+AGG | + | chr8.2:27984718-27984737 | None:intergenic | 50.0% | |
| CGCAGGGATTTACTCAACTC+GGG | + | chr8.2:27983580-27983599 | None:intergenic | 50.0% | |
| CTAGGCCTCCAATTTATGGG+GGG | + | chr8.2:27983406-27983425 | None:intergenic | 50.0% | |
| CTGATATGCTCTAACTGCGC+AGG | - | chr8.2:27985518-27985537 | MS.gene011996:intron | 50.0% | |
| GCTAGGCCTCCAATTTATGG+GGG | + | chr8.2:27983407-27983426 | None:intergenic | 50.0% | |
| GGAGCTAGGCCTCCAATTTA+TGG | + | chr8.2:27983410-27983429 | None:intergenic | 50.0% | |
| GGGGGGGCTCAAATATTTGT+AGG | + | chr8.2:27983389-27983408 | None:intergenic | 50.0% | |
| TAGGCCTCCAATTTATGGGG+GGG | + | chr8.2:27983405-27983424 | None:intergenic | 50.0% | |
| TGTAGTGCGTACACTGGTGA+GGG | - | chr8.2:27985591-27985610 | MS.gene011996:intron | 50.0% | |
| TTCACTCACCCCTAACGATC+TGG | - | chr8.2:27982667-27982686 | MS.gene011996:intron | 50.0% | |
| ! | CCTGATCTTGGTAACTTCGC+AGG | - | chr8.2:27984715-27984734 | MS.gene011996:intron | 50.0% |
| ! | GCTGTATCCACTGAAGGCAT+TGG | + | chr8.2:27984319-27984338 | None:intergenic | 50.0% |
| ! | GGGATTTGATTGGTTGGTCC+AGG | - | chr8.2:27985623-27985642 | MS.gene011996:CDS | 50.0% |
| ! | GGGTTTTCGCGATTCTGATC+GGG | + | chr8.2:27982634-27982653 | None:intergenic | 50.0% |
| ! | GGTGTTGAACTTGGAAGCGA+TGG | - | chr8.2:27985539-27985558 | MS.gene011996:intron | 50.0% |
| !! | AACTGCGCAGGTGTTGAACT+TGG | - | chr8.2:27985530-27985549 | MS.gene011996:intron | 50.0% |
| !! | GCAGTGGGTTGGACAATTCA+GGG | - | chr8.2:27982108-27982127 | MS.gene011996:intron | 50.0% |
| !! | TGCAGTGGGTTGGACAATTC+AGG | - | chr8.2:27982107-27982126 | MS.gene011996:intron | 50.0% |
| AGCGTCATCAGTCCTACCCT+TGG | - | chr8.2:27982170-27982189 | MS.gene011996:intron | 55.0% | |
| AGTTCAGGGCTGTGGCTTCT+CGG | - | chr8.2:27983027-27983046 | MS.gene011996:intron | 55.0% | |
| CTGTAGTGCGTACACTGGTG+AGG | - | chr8.2:27985590-27985609 | MS.gene011996:intron | 55.0% | |
| GCAAGGAGCTCTATGGAGCT+AGG | + | chr8.2:27983424-27983443 | None:intergenic | 55.0% | |
| GGCAAGAGCAAGGAGCTCTA+TGG | + | chr8.2:27983431-27983450 | None:intergenic | 55.0% | |
| GTTGGCTGTAGTGCGTACAC+TGG | - | chr8.2:27985585-27985604 | MS.gene011996:intron | 55.0% | |
| TGAGCCCCCCCATAAATTGG+AGG | - | chr8.2:27983398-27983417 | MS.gene011996:intron | 55.0% | |
| ! | ACTGGTGAGGGCTTGCTTGA+GGG | - | chr8.2:27985603-27985622 | MS.gene011996:intron | 55.0% |
| ! | GGGTGGTTTGGCTTAGGTGT+TGG | - | chr8.2:27983130-27983149 | MS.gene011996:intron | 55.0% |
| !!! | TGCCATGCTGTTTTGGCGCT+GGG | - | chr8.2:27982989-27983008 | MS.gene011996:CDS | 55.0% |
| AGGAAACGGCCCTGGCTACA+CGG | + | chr8.2:27983161-27983180 | None:intergenic | 60.0% | |
| CACCCAGCGCCAAAACAGCA+TGG | + | chr8.2:27982994-27983013 | None:intergenic | 60.0% | |
| GAGAAGCCACAGCCCTGAAC+TGG | + | chr8.2:27983028-27983047 | None:intergenic | 60.0% | |
| GGCTGCGGTCTTCCAGTTCA+GGG | - | chr8.2:27983013-27983032 | MS.gene011996:intron | 60.0% | |
| GGTCTTCCAGTTCAGGGCTG+TGG | - | chr8.2:27983019-27983038 | MS.gene011996:intron | 60.0% | |
| TCCTTGCTCTTGCCCAGCGA+CGG | - | chr8.2:27983437-27983456 | MS.gene011996:intron | 60.0% | |
| TGGCTGCGGTCTTCCAGTTC+AGG | - | chr8.2:27983012-27983031 | MS.gene011996:intron | 60.0% | |
| ! | CACTGGTGAGGGCTTGCTTG+AGG | - | chr8.2:27985602-27985621 | MS.gene011996:intron | 60.0% |
| !! | TTGGCCTTGCCGTGTAGCCA+GGG | - | chr8.2:27983149-27983168 | MS.gene011996:intron | 60.0% |
| !!! | CATGCTGTTTTGGCGCTGGG+TGG | - | chr8.2:27982992-27983011 | MS.gene011996:CDS | 60.0% |
| !!! | GTGCCATGCTGTTTTGGCGC+TGG | - | chr8.2:27982988-27983007 | MS.gene011996:CDS | 60.0% |
| CCTTGCTCTTGCCCAGCGAC+GGG | - | chr8.2:27983438-27983457 | MS.gene011996:intron | 65.0% | |
| GCTGTGGCTTCTCGGCAGTG+GGG | - | chr8.2:27983035-27983054 | MS.gene011996:intron | 65.0% | |
| GGCTGTGGCTTCTCGGCAGT+GGG | - | chr8.2:27983034-27983053 | MS.gene011996:intron | 65.0% | |
| TCGGCAGTGGGGTCTGTCTG+TGG | - | chr8.2:27983046-27983065 | MS.gene011996:intron | 65.0% | |
| !! | AAAAGGCCGGTGCTGCACGC+AGG | + | chr8.2:27983464-27983483 | None:intergenic | 65.0% |
| !! | GTTGGCCTTGCCGTGTAGCC+AGG | - | chr8.2:27983148-27983167 | MS.gene011996:intron | 65.0% |
| !! | GTTTTGGCGCTGGGTGGCTG+CGG | - | chr8.2:27982998-27983017 | MS.gene011996:CDS | 65.0% |
| ACGGCCCTGGCTACACGGCA+AGG | + | chr8.2:27983156-27983175 | None:intergenic | 70.0% | |
| CCCGTCGCTGGGCAAGAGCA+AGG | + | chr8.2:27983441-27983460 | None:intergenic | 70.0% | |
| GGGCTGTGGCTTCTCGGCAG+TGG | - | chr8.2:27983033-27983052 | MS.gene011996:intron | 70.0% | |
| CTGCACGCAGGCCCGTCGCT+GGG | + | chr8.2:27983452-27983471 | None:intergenic | 75.0% | |
| GACGGGCCTGCGTGCAGCAC+CGG | - | chr8.2:27983455-27983474 | MS.gene011996:intron | 75.0% | |
| ! | GCTGCACGCAGGCCCGTCGC+TGG | + | chr8.2:27983453-27983472 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 27981966 | 27985677 | 27981966 | ID=MS.gene011996 |
| chr8.2 | mRNA | 27981966 | 27985677 | 27981966 | ID=MS.gene011996.t1;Parent=MS.gene011996 |
| chr8.2 | exon | 27985613 | 27985677 | 27985613 | ID=MS.gene011996.t1.exon1;Parent=MS.gene011996.t1 |
| chr8.2 | CDS | 27985613 | 27985677 | 27985613 | ID=cds.MS.gene011996.t1;Parent=MS.gene011996.t1 |
| chr8.2 | exon | 27985421 | 27985531 | 27985421 | ID=MS.gene011996.t1.exon2;Parent=MS.gene011996.t1 |
| chr8.2 | CDS | 27985421 | 27985531 | 27985421 | ID=cds.MS.gene011996.t1;Parent=MS.gene011996.t1 |
| chr8.2 | exon | 27983536 | 27983698 | 27983536 | ID=MS.gene011996.t1.exon3;Parent=MS.gene011996.t1 |
| chr8.2 | CDS | 27983536 | 27983698 | 27983536 | ID=cds.MS.gene011996.t1;Parent=MS.gene011996.t1 |
| chr8.2 | exon | 27982950 | 27983030 | 27982950 | ID=MS.gene011996.t1.exon4;Parent=MS.gene011996.t1 |
| chr8.2 | CDS | 27982950 | 27983030 | 27982950 | ID=cds.MS.gene011996.t1;Parent=MS.gene011996.t1 |
| chr8.2 | exon | 27981966 | 27982103 | 27981966 | ID=MS.gene011996.t1.exon5;Parent=MS.gene011996.t1 |
| chr8.2 | CDS | 27981966 | 27982103 | 27981966 | ID=cds.MS.gene011996.t1;Parent=MS.gene011996.t1 |
| Gene Sequence |
| Protein sequence |
