Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012429.t1 | XP_003610185.1 | 99.4 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 3.20E-91 | 344.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012429.t1 | Q96361 | 92.4 | 171 | 13 | 0 | 1 | 171 | 1 | 171 | 8.7e-90 | 330.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012429.t1 | G7JD44 | 99.4 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 2.3e-91 | 344.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012429.t1 | MTR_4g128910 | 98.266 | 173 | 3 | 0 | 1 | 173 | 1 | 173 | 1.67e-125 | 350 |
| MS.gene012429.t1 | MTR_6g005820 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.05e-80 | 237 |
| MS.gene012429.t1 | MTR_5g034130 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.38e-80 | 237 |
| MS.gene012429.t1 | MTR_5g034125 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.38e-80 | 237 |
| MS.gene012429.t1 | MTR_7g109960 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.44e-80 | 236 |
| MS.gene012429.t1 | MTR_1g086480 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 2.11e-80 | 236 |
| MS.gene012429.t1 | MTR_5g016540 | 56.647 | 173 | 75 | 0 | 1 | 173 | 1 | 173 | 1.08e-73 | 219 |
| MS.gene012429.t1 | MTR_5g007810 | 56.647 | 173 | 75 | 0 | 1 | 173 | 1 | 173 | 2.14e-70 | 211 |
| MS.gene012429.t1 | MTR_4g077640 | 54.913 | 173 | 78 | 0 | 1 | 173 | 1 | 173 | 1.34e-66 | 202 |
| MS.gene012429.t1 | MTR_5g007820 | 52.601 | 173 | 80 | 1 | 1 | 171 | 1 | 173 | 1.62e-64 | 196 |
| MS.gene012429.t1 | MTR_1g076550 | 49.133 | 173 | 88 | 0 | 1 | 173 | 1 | 173 | 1.34e-59 | 183 |
| MS.gene012429.t1 | MTR_5g007840 | 41.176 | 204 | 75 | 2 | 1 | 171 | 1 | 192 | 3.62e-47 | 153 |
| MS.gene012429.t1 | MTR_8g077540 | 49.032 | 155 | 76 | 3 | 19 | 171 | 18 | 171 | 1.13e-45 | 148 |
| MS.gene012429.t1 | MTR_8g077540 | 49.032 | 155 | 76 | 3 | 19 | 171 | 44 | 197 | 2.15e-45 | 148 |
| MS.gene012429.t1 | MTR_5g015370 | 38.037 | 163 | 98 | 2 | 1 | 160 | 1 | 163 | 1.86e-33 | 117 |
| MS.gene012429.t1 | MTR_2g022200 | 34.637 | 179 | 106 | 2 | 4 | 173 | 4 | 180 | 7.78e-33 | 116 |
| MS.gene012429.t1 | MTR_5g078090 | 35.948 | 153 | 97 | 1 | 9 | 160 | 11 | 163 | 6.61e-29 | 105 |
| MS.gene012429.t1 | MTR_4g026950 | 35.915 | 142 | 90 | 1 | 20 | 160 | 3 | 144 | 1.40e-27 | 101 |
| MS.gene012429.t1 | MTR_8g077540 | 49.485 | 97 | 47 | 2 | 19 | 114 | 18 | 113 | 2.06e-27 | 100 |
| MS.gene012429.t1 | MTR_7g112090 | 32.749 | 171 | 103 | 1 | 15 | 173 | 18 | 188 | 1.07e-25 | 97.8 |
| MS.gene012429.t1 | MTR_2g034640 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 1.11e-25 | 97.8 |
| MS.gene012429.t1 | MTR_4g121860 | 38.931 | 131 | 80 | 0 | 15 | 145 | 18 | 148 | 4.60e-24 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012429.t1 | AT2G24765 | 91.813 | 171 | 14 | 0 | 1 | 171 | 1 | 171 | 4.35e-119 | 334 |
| MS.gene012429.t1 | AT2G24765 | 92.969 | 128 | 9 | 0 | 1 | 128 | 1 | 128 | 1.41e-87 | 253 |
| MS.gene012429.t1 | AT5G14670 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 3.83e-80 | 236 |
| MS.gene012429.t1 | AT5G14670 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 3.83e-80 | 236 |
| MS.gene012429.t1 | AT5G14670 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 6.35e-80 | 235 |
| MS.gene012429.t1 | AT1G10630 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 8.23e-80 | 235 |
| MS.gene012429.t1 | AT1G10630 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 8.23e-80 | 235 |
| MS.gene012429.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT1G23490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene012429.t1 | AT3G62290 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.13e-79 | 234 |
| MS.gene012429.t1 | AT3G62290 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.13e-79 | 234 |
| MS.gene012429.t1 | AT3G62290 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.13e-79 | 234 |
| MS.gene012429.t1 | AT2G47170 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.49e-79 | 233 |
| MS.gene012429.t1 | AT2G47170 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.49e-79 | 233 |
| MS.gene012429.t1 | AT2G47170 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.49e-79 | 233 |
| MS.gene012429.t1 | AT5G17060 | 54.335 | 173 | 79 | 0 | 1 | 173 | 1 | 173 | 1.03e-68 | 207 |
| MS.gene012429.t1 | AT5G17060 | 54.335 | 173 | 79 | 0 | 1 | 173 | 1 | 173 | 1.03e-68 | 207 |
| MS.gene012429.t1 | AT3G03120 | 54.913 | 173 | 78 | 0 | 1 | 173 | 1 | 173 | 6.59e-68 | 205 |
| MS.gene012429.t1 | AT2G15310 | 56.140 | 171 | 75 | 0 | 1 | 171 | 1 | 171 | 3.35e-65 | 199 |
| MS.gene012429.t1 | AT3G22950 | 49.133 | 173 | 88 | 0 | 1 | 173 | 1 | 173 | 8.10e-60 | 184 |
| MS.gene012429.t1 | AT3G22950 | 49.133 | 173 | 88 | 0 | 1 | 173 | 1 | 173 | 8.10e-60 | 184 |
| MS.gene012429.t1 | AT3G03120 | 57.692 | 130 | 55 | 0 | 1 | 130 | 1 | 130 | 1.18e-53 | 167 |
| MS.gene012429.t1 | AT2G18390 | 48.387 | 155 | 77 | 3 | 19 | 171 | 18 | 171 | 7.31e-45 | 146 |
| MS.gene012429.t1 | AT1G02430 | 34.595 | 185 | 107 | 5 | 1 | 173 | 1 | 183 | 1.04e-36 | 125 |
| MS.gene012429.t1 | AT1G02440 | 31.351 | 185 | 113 | 5 | 1 | 173 | 1 | 183 | 8.58e-34 | 118 |
| MS.gene012429.t1 | AT3G49870 | 36.810 | 163 | 100 | 2 | 1 | 160 | 1 | 163 | 5.50e-33 | 116 |
| MS.gene012429.t1 | AT1G02430 | 34.161 | 161 | 96 | 4 | 1 | 153 | 1 | 159 | 2.19e-32 | 114 |
| MS.gene012429.t1 | AT5G67560 | 36.424 | 151 | 95 | 1 | 11 | 160 | 13 | 163 | 1.16e-31 | 112 |
| MS.gene012429.t1 | AT5G52210 | 32.768 | 177 | 112 | 1 | 4 | 173 | 4 | 180 | 7.59e-31 | 111 |
| MS.gene012429.t1 | AT5G52210 | 32.768 | 177 | 112 | 1 | 4 | 173 | 4 | 180 | 7.59e-31 | 111 |
| MS.gene012429.t1 | AT3G49870 | 37.857 | 140 | 86 | 1 | 22 | 160 | 5 | 144 | 1.31e-30 | 109 |
| MS.gene012429.t1 | AT3G49860 | 38.406 | 138 | 84 | 1 | 16 | 152 | 10 | 147 | 2.87e-30 | 108 |
| MS.gene012429.t1 | AT5G37680 | 34.641 | 153 | 99 | 1 | 9 | 160 | 11 | 163 | 4.50e-28 | 103 |
| MS.gene012429.t1 | AT4G02080 | 33.333 | 171 | 102 | 1 | 15 | 173 | 18 | 188 | 8.64e-26 | 97.8 |
| MS.gene012429.t1 | AT3G62560 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 1.12e-25 | 97.8 |
| MS.gene012429.t1 | AT1G56330 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 3.09e-25 | 96.7 |
| MS.gene012429.t1 | AT1G09180 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 1.19e-24 | 95.1 |
| MS.gene012429.t1 | AT5G37680 | 36.522 | 115 | 73 | 0 | 46 | 160 | 2 | 116 | 3.19e-23 | 89.7 |
| MS.gene012429.t1 | AT1G02440 | 27.922 | 154 | 75 | 4 | 1 | 153 | 1 | 119 | 1.13e-20 | 82.8 |
Find 30 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATTATTGCTTGAGTATT+TGG | 0.102072 | 8.3:+2650656 | None:intergenic |
| TTTAAAACTTCTGCTATAAA+AGG | 0.186926 | 8.3:-2649239 | MS.gene012429:CDS |
| AAATTTCAAGTCTGGGATTT+AGG | 0.205831 | 8.3:-2653141 | MS.gene012429:intron |
| TTTCAGGAAGAAGAACTAAA+AGG | 0.299609 | 8.3:-2649586 | MS.gene012429:intron |
| ACAACATTAAATTTCAAGTC+TGG | 0.314420 | 8.3:-2653149 | MS.gene012429:CDS |
| GGAGGAGTTCCATGCAATTC+TGG | 0.326352 | 8.3:-2650591 | MS.gene012429:CDS |
| GGAAAGTAACACCTCCAATA+TGG | 0.374802 | 8.3:+2650677 | None:intergenic |
| TTGATTCAAGTGACACTGAT+AGG | 0.424944 | 8.3:-2650628 | MS.gene012429:CDS |
| CAACATTAAATTTCAAGTCT+GGG | 0.430700 | 8.3:-2653148 | MS.gene012429:CDS |
| CTGATAGGCTTGTGATAGCT+AGG | 0.436345 | 8.3:-2650613 | MS.gene012429:CDS |
| CAGGTGGGCAAACAAGTATC+AGG | 0.480395 | 8.3:-2651743 | MS.gene012429:intron |
| ATGAAGAAGCATACATAGAA+TGG | 0.499743 | 8.3:+2653499 | None:intergenic |
| GAAGCTCGAATTCTCGTTCT+CGG | 0.503966 | 8.3:-2653545 | MS.gene012429:CDS |
| GATTATTTGATACAGCGATC+GGG | 0.525019 | 8.3:-2653197 | MS.gene012429:intron |
| TTGTCCATAGGCCATATTGG+AGG | 0.528609 | 8.3:-2650688 | MS.gene012429:intron |
| CCGTCACTGCAGCATCATCA+AGG | 0.530798 | 8.3:+2649306 | None:intergenic |
| CCTTGATGATGCTGCAGTGA+CGG | 0.531460 | 8.3:-2649306 | MS.gene012429:CDS |
| TCCATTATGCAGGATCTACC+AGG | 0.537332 | 8.3:-2649332 | MS.gene012429:intron |
| GCAGCATCATCAAGGGCGCC+TGG | 0.541314 | 8.3:+2649314 | None:intergenic |
| CATATACCTCCAGAATTGCA+TGG | 0.565860 | 8.3:+2650582 | None:intergenic |
| TTCAGATCGGCTTCAGATGG+GGG | 0.572150 | 8.3:-2653418 | MS.gene012429:intron |
| TTTCAGATCGGCTTCAGATG+GGG | 0.576469 | 8.3:-2653419 | MS.gene012429:intron |
| ACTTCTGCTATAAAAGGCGA+AGG | 0.577101 | 8.3:-2649233 | MS.gene012429:CDS |
| CGTCACTGCAGCATCATCAA+GGG | 0.584247 | 8.3:+2649307 | None:intergenic |
| GTTCTCGGTCTTGACAATGC+CGG | 0.612027 | 8.3:-2653530 | MS.gene012429:CDS |
| TGATAGGCTTGTGATAGCTA+GGG | 0.616455 | 8.3:-2650612 | MS.gene012429:CDS |
| GATCGGGTACGAACTTGGAA+TGG | 0.618717 | 8.3:+2653383 | None:intergenic |
| TAGGCTTGTGATAGCTAGGG+AGG | 0.666014 | 8.3:-2650609 | MS.gene012429:CDS |
| AAGAAGCATACATAGAATGG+TGG | 0.667666 | 8.3:+2653502 | None:intergenic |
| GGAGTTCCATGCAATTCTGG+AGG | 0.674172 | 8.3:-2650588 | MS.gene012429:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAATTTATTTATAATGT+TGG | - | chr8.3:2651788-2651807 | MS.gene012429:intron | 10.0% |
| !!! | AAGTAATAAACTATATTTTA+AGG | + | chr8.3:2650823-2650842 | None:intergenic | 10.0% |
| !! | AAAACTAATAAAACTTAACT+TGG | + | chr8.3:2650190-2650209 | None:intergenic | 15.0% |
| !! | AAATTTACTACATATATATC+AGG | + | chr8.3:2651955-2651974 | None:intergenic | 15.0% |
| !! | AAGAGTTAAGATTAAAAAAA+AGG | + | chr8.3:2651184-2651203 | None:intergenic | 15.0% |
| !! | AATTATTTATCAAACAAAAC+AGG | + | chr8.3:2652566-2652585 | None:intergenic | 15.0% |
| !! | AATTTACTACATATATATCA+GGG | + | chr8.3:2651954-2651973 | None:intergenic | 15.0% |
| !! | ATAATAAAAGTTATTGTCAA+AGG | + | chr8.3:2650741-2650760 | None:intergenic | 15.0% |
| !! | ATTAGATCATAATATCAAAT+AGG | + | chr8.3:2651129-2651148 | None:intergenic | 15.0% |
| !! | ATTTACTTACAAAAAATTAC+TGG | + | chr8.3:2649997-2650016 | None:intergenic | 15.0% |
| !! | CAATAAAATTACAATTACTA+AGG | + | chr8.3:2652815-2652834 | None:intergenic | 15.0% |
| !! | TATAATTACCAGTAAAAATA+AGG | + | chr8.3:2652604-2652623 | None:intergenic | 15.0% |
| !! | TTAAAATAAAATCTAGTCAA+AGG | + | chr8.3:2652991-2653010 | None:intergenic | 15.0% |
| !! | TTAGATCATAATATCAAATA+GGG | + | chr8.3:2651128-2651147 | None:intergenic | 15.0% |
| !!! | ACAACTTTGAAATAAAATAA+AGG | + | chr8.3:2649873-2649892 | None:intergenic | 15.0% |
| !!! | CAACTTTGAAATAAAATAAA+GGG | + | chr8.3:2649872-2649891 | None:intergenic | 15.0% |
| !!! | TAGTAATTGTAATTTTATTG+TGG | - | chr8.3:2652815-2652834 | MS.gene012429:intron | 15.0% |
| !!! | TGTATTTTATGTATGTTTTA+TGG | - | chr8.3:2649616-2649635 | MS.gene012429:intron | 15.0% |
| !!! | TTTTTTCCTAATAAAATACA+AGG | + | chr8.3:2651473-2651492 | None:intergenic | 15.0% |
| !! | AAATAATCAAAGACAGTAAA+AGG | + | chr8.3:2651984-2652003 | None:intergenic | 20.0% |
| !! | AATGTGGGAAAATAATTATA+TGG | - | chr8.3:2651848-2651867 | MS.gene012429:intron | 20.0% |
| !! | ATGCATTAAAGAAAATAAAC+AGG | - | chr8.3:2650790-2650809 | MS.gene012429:intron | 20.0% |
| !! | ATGTAAAAAACTAGCAATAA+AGG | - | chr8.3:2649916-2649935 | MS.gene012429:intron | 20.0% |
| !! | ATTATGATCTAATTCAATTG+CGG | - | chr8.3:2651136-2651155 | MS.gene012429:intron | 20.0% |
| !! | CAAAATTTGTAAAGATAACA+TGG | + | chr8.3:2649720-2649739 | None:intergenic | 20.0% |
| !! | GAAACGGATAAAAATTAATT+AGG | + | chr8.3:2652967-2652986 | None:intergenic | 20.0% |
| !! | TAATTCAAAATATTGAGTAC+AGG | + | chr8.3:2650432-2650451 | None:intergenic | 20.0% |
| !! | TAGATCATAATATCAAATAG+GGG | + | chr8.3:2651127-2651146 | None:intergenic | 20.0% |
| !! | TTGAAACTTCTCATTATATT+TGG | + | chr8.3:2651426-2651445 | None:intergenic | 20.0% |
| !!! | AACTTTTATTTTATACAGGT+GGG | - | chr8.3:2650936-2650955 | MS.gene012429:intron | 20.0% |
| !!! | AAGTTTTAAAAATAGACCAT+TGG | + | chr8.3:2653445-2653464 | None:intergenic | 20.0% |
| !!! | AATTGTAATTTTATTGTGGA+GGG | - | chr8.3:2652819-2652838 | MS.gene012429:intron | 20.0% |
| !!! | ATCCAACTTTTATTTTATAC+AGG | - | chr8.3:2650932-2650951 | MS.gene012429:intron | 20.0% |
| !!! | ATTACTAAGGATTCATTTTT+TGG | + | chr8.3:2652802-2652821 | None:intergenic | 20.0% |
| !!! | TAAAATTGAATGCTATTTCA+AGG | - | chr8.3:2653515-2653534 | MS.gene012429:CDS | 20.0% |
| !!! | TAAAGGATTTGTTTACAAAA+TGG | - | chr8.3:2652659-2652678 | MS.gene012429:intron | 20.0% |
| !!! | TAAGTTTTATTAGTTTTTCC+CGG | - | chr8.3:2650193-2650212 | MS.gene012429:intron | 20.0% |
| !!! | TAATTGTAATTTTATTGTGG+AGG | - | chr8.3:2652818-2652837 | MS.gene012429:intron | 20.0% |
| !!! | TTCTTTCATTTTTTTCAGAT+CGG | - | chr8.3:2649263-2649282 | MS.gene012429:CDS | 20.0% |
| !!! | TTGATTATTTTTTTGTCCAT+AGG | - | chr8.3:2651994-2652013 | MS.gene012429:intron | 20.0% |
| !!! | TTGTTTTTCTTCTAGATTTT+AGG | + | chr8.3:2651364-2651383 | None:intergenic | 20.0% |
| !!! | TTTAAAACTTCTGCTATAAA+AGG | - | chr8.3:2653455-2653474 | MS.gene012429:intron | 20.0% |
| !!! | TTTGTATTCCTTATTTTTAC+TGG | - | chr8.3:2652593-2652612 | MS.gene012429:intron | 20.0% |
| ! | AAAATGAATAAGATTGCGTT+AGG | + | chr8.3:2651703-2651722 | None:intergenic | 25.0% |
| ! | AAGAAATGAAATTGACAAGT+AGG | + | chr8.3:2652886-2652905 | None:intergenic | 25.0% |
| ! | AAGTGTATTTACTGTTCTAA+AGG | - | chr8.3:2652642-2652661 | MS.gene012429:intron | 25.0% |
| ! | AGAATTTGATTCATAAGTGT+TGG | - | chr8.3:2653165-2653184 | MS.gene012429:CDS | 25.0% |
| ! | AGCTTATATTGCAATTTACA+AGG | - | chr8.3:2652229-2652248 | MS.gene012429:intron | 25.0% |
| ! | AGCTTGAGGAAAAAAAAAAA+AGG | + | chr8.3:2650323-2650342 | None:intergenic | 25.0% |
| ! | ATTTGAAAACCATACTAGTT+TGG | + | chr8.3:2649830-2649849 | None:intergenic | 25.0% |
| ! | CACCTGTATAAAATAAAAGT+TGG | + | chr8.3:2650937-2650956 | None:intergenic | 25.0% |
| ! | CTAAAAGAGAAATTCATCTT+TGG | + | chr8.3:2651771-2651790 | None:intergenic | 25.0% |
| ! | GCTTATATTGCAATTTACAA+GGG | - | chr8.3:2652230-2652249 | MS.gene012429:intron | 25.0% |
| ! | GGATAGAAAAAAAATACTAC+TGG | + | chr8.3:2651106-2651125 | None:intergenic | 25.0% |
| ! | TAGATTATTGCTTGAGTATT+TGG | + | chr8.3:2652041-2652060 | None:intergenic | 25.0% |
| ! | TGATTAAAAGAACAAATCAC+AGG | - | chr8.3:2651879-2651898 | MS.gene012429:intron | 25.0% |
| ! | TTTACAGCTAAACAGAAATA+TGG | + | chr8.3:2651207-2651226 | None:intergenic | 25.0% |
| !! | AAGCAACCTTGTATTTTATT+AGG | - | chr8.3:2651464-2651483 | MS.gene012429:intron | 25.0% |
| !! | AATTCTCTCTGAAAATGATA+AGG | - | chr8.3:2651563-2651582 | MS.gene012429:intron | 25.0% |
| !! | ACAACATTAAATTTCAAGTC+TGG | - | chr8.3:2649545-2649564 | MS.gene012429:intron | 25.0% |
| !! | AGATTGTTTTCATCTGTTTT+CGG | - | chr8.3:2649119-2649138 | MS.gene012429:intron | 25.0% |
| !! | ATTCTCTCTGAAAATGATAA+GGG | - | chr8.3:2651564-2651583 | MS.gene012429:intron | 25.0% |
| !! | ATTGTAATTTTATTGTGGAG+GGG | - | chr8.3:2652820-2652839 | MS.gene012429:intron | 25.0% |
| !! | ATTTTGCATCATTTGATCAT+AGG | - | chr8.3:2649734-2649753 | MS.gene012429:intron | 25.0% |
| !! | ATTTTTGATACTTGCATGTA+TGG | - | chr8.3:2649451-2649470 | MS.gene012429:intron | 25.0% |
| !! | CAACATTAAATTTCAAGTCT+GGG | - | chr8.3:2649546-2649565 | MS.gene012429:intron | 25.0% |
| !! | TATCATTTTCAGAGAGAATT+AGG | + | chr8.3:2651563-2651582 | None:intergenic | 25.0% |
| !! | TTTTGCATCATTTGATCATA+GGG | - | chr8.3:2649735-2649754 | MS.gene012429:intron | 25.0% |
| !!! | CAACTTTTATTTTATACAGG+TGG | - | chr8.3:2650935-2650954 | MS.gene012429:intron | 25.0% |
| !!! | CTTATTCATTTTTGAAACTG+CGG | - | chr8.3:2651711-2651730 | MS.gene012429:intron | 25.0% |
| !!! | GTTTTAAACTTTAAGTTTGC+TGG | - | chr8.3:2650558-2650577 | MS.gene012429:intron | 25.0% |
| !!! | TGAATTTTGATATAGTGCAA+GGG | - | chr8.3:2650695-2650714 | MS.gene012429:intron | 25.0% |
| !!! | TTGAATTTTGATATAGTGCA+AGG | - | chr8.3:2650694-2650713 | MS.gene012429:intron | 25.0% |
| !!! | TTTTTGACTGAATCTAATTC+TGG | - | chr8.3:2652484-2652503 | MS.gene012429:intron | 25.0% |
| AAAAACAGTGGTTGTTGTAT+AGG | + | chr8.3:2650398-2650417 | None:intergenic | 30.0% | |
| AAAAGGAATTGCATGATGAA+TGG | + | chr8.3:2651167-2651186 | None:intergenic | 30.0% | |
| AAACTAATTCCTCTTAGCTT+AGG | + | chr8.3:2652467-2652486 | None:intergenic | 30.0% | |
| AAATACTAGCAAGCATACAT+GGG | - | chr8.3:2650530-2650549 | MS.gene012429:intron | 30.0% | |
| AAATCTAGTCAAAGGAGAAA+CGG | + | chr8.3:2652983-2653002 | None:intergenic | 30.0% | |
| ACAAGATTAAAAATCGCCAA+TGG | - | chr8.3:2653426-2653445 | MS.gene012429:intron | 30.0% | |
| ACAATCTCATGTGATATTGT+AGG | - | chr8.3:2651393-2651412 | MS.gene012429:intron | 30.0% | |
| ACACACTTCATTTACAACTT+TGG | - | chr8.3:2652168-2652187 | MS.gene012429:intron | 30.0% | |
| AGAACAATGTAAAACGAGAT+CGG | + | chr8.3:2649331-2649350 | None:intergenic | 30.0% | |
| AGTTCTTCTTCCTGAAAAAA+AGG | + | chr8.3:2653105-2653124 | None:intergenic | 30.0% | |
| ATAACATGGTAATCTCAACA+AGG | + | chr8.3:2649706-2649725 | None:intergenic | 30.0% | |
| ATCATTTGATCATAGGGATA+AGG | - | chr8.3:2649741-2649760 | MS.gene012429:intron | 30.0% | |
| ATTAGAAATTGAAACAAGCC+AGG | + | chr8.3:2650912-2650931 | None:intergenic | 30.0% | |
| CTCAACAAGGAAAGATAATA+CGG | + | chr8.3:2649693-2649712 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr8.3:2652331-2652350 | MS.gene012429:intron | 30.0% | |
| GTACTATAGAAGAATGATGT+AGG | - | chr8.3:2652417-2652436 | MS.gene012429:intron | 30.0% | |
| TAAATACTAGCAAGCATACA+TGG | - | chr8.3:2650529-2650548 | MS.gene012429:intron | 30.0% | |
| TAACTATTCTCCTTTGACTA+TGG | - | chr8.3:2653008-2653027 | MS.gene012429:intron | 30.0% | |
| TACTAGAAATACACACATCA+AGG | + | chr8.3:2651244-2651263 | None:intergenic | 30.0% | |
| TATTGCAATTTACAAGGGAT+TGG | - | chr8.3:2652235-2652254 | MS.gene012429:intron | 30.0% | |
| TCAGAGAGAATTAGGAAATT+TGG | + | chr8.3:2651555-2651574 | None:intergenic | 30.0% | |
| TCATGTGATATTGTAGGTTA+AGG | - | chr8.3:2651399-2651418 | MS.gene012429:intron | 30.0% | |
| TCGGAAACAACTTAAAACTA+TGG | - | chr8.3:2652727-2652746 | MS.gene012429:intron | 30.0% | |
| TGATTATTTGATACAGCGAT+CGG | - | chr8.3:2649496-2649515 | MS.gene012429:intron | 30.0% | |
| TGATTCATCCTAATTGGAAT+AGG | - | chr8.3:2652511-2652530 | MS.gene012429:intron | 30.0% | |
| TTACAAAAAATTACTGGTGC+TGG | + | chr8.3:2649991-2650010 | None:intergenic | 30.0% | |
| TTACTTTAACAACGAATAGC+TGG | - | chr8.3:2651053-2651072 | MS.gene012429:intron | 30.0% | |
| TTGCATATCTTAATGACTTG+TGG | - | chr8.3:2650134-2650153 | MS.gene012429:intron | 30.0% | |
| TTTCAGGAAGAAGAACTAAA+AGG | - | chr8.3:2653108-2653127 | MS.gene012429:intron | 30.0% | |
| ! | AAATTTCAAGTCTGGGATTT+AGG | - | chr8.3:2649553-2649572 | MS.gene012429:intron | 30.0% |
| ! | AAGCTTCACGTAATCTATTT+TGG | + | chr8.3:2652382-2652401 | None:intergenic | 30.0% |
| ! | ATGAAGAAGCATACATAGAA+TGG | + | chr8.3:2649198-2649217 | None:intergenic | 30.0% |
| ! | ATTCCTACCTCTAAGAAAAA+AGG | + | chr8.3:2650230-2650249 | None:intergenic | 30.0% |
| ! | TGCATATCTTAATGACTTGT+GGG | - | chr8.3:2650135-2650154 | MS.gene012429:intron | 30.0% |
| !! | AATGCTATTTCAAGGTAGTT+AGG | - | chr8.3:2653523-2653542 | MS.gene012429:CDS | 30.0% |
| !! | TCTCATTTTTGCAAACAAAC+AGG | - | chr8.3:2653140-2653159 | MS.gene012429:intron | 30.0% |
| !!! | ATCGTTGTTTTGAATGATTG+GGG | - | chr8.3:2652539-2652558 | MS.gene012429:intron | 30.0% |
| !!! | GATCGTTGTTTTGAATGATT+GGG | - | chr8.3:2652538-2652557 | MS.gene012429:intron | 30.0% |
| !!! | TGATCGTTGTTTTGAATGAT+TGG | - | chr8.3:2652537-2652556 | MS.gene012429:intron | 30.0% |
| AACATGTAACAAAGCGAGTT+TGG | - | chr8.3:2650612-2650631 | MS.gene012429:CDS | 35.0% | |
| AGCTATGAAGCTGATATGAT+CGG | - | chr8.3:2653238-2653257 | MS.gene012429:intron | 35.0% | |
| ATTGAGTACAGGATTTAGTG+AGG | + | chr8.3:2650421-2650440 | None:intergenic | 35.0% | |
| CAAGTATCAGGTAAACCTTA+TGG | - | chr8.3:2650963-2650982 | MS.gene012429:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | - | chr8.3:2652338-2652357 | MS.gene012429:intron | 35.0% | |
| CTAAGAAAATAGCTTGACAC+AGG | + | chr8.3:2650769-2650788 | None:intergenic | 35.0% | |
| CTAATTAACTGCAGAAGGAT+TGG | + | chr8.3:2651275-2651294 | None:intergenic | 35.0% | |
| GAACAATGTAAAACGAGATC+GGG | + | chr8.3:2649330-2649349 | None:intergenic | 35.0% | |
| GAACGTTGCCTATAAACAAA+AGG | + | chr8.3:2651608-2651627 | None:intergenic | 35.0% | |
| GACAACAAAACCATAGTCAA+AGG | + | chr8.3:2653021-2653040 | None:intergenic | 35.0% | |
| GATCAAAGCCTATTCCAATT+AGG | + | chr8.3:2652522-2652541 | None:intergenic | 35.0% | |
| GATGCAAGAATGAAACCATA+AGG | + | chr8.3:2650981-2651000 | None:intergenic | 35.0% | |
| GATTATTTGATACAGCGATC+GGG | - | chr8.3:2649497-2649516 | MS.gene012429:intron | 35.0% | |
| GATTTAGTGAGGAAAAACAG+TGG | + | chr8.3:2650410-2650429 | None:intergenic | 35.0% | |
| GCAGTACTTCTTAAGAAAGT+TGG | - | chr8.3:2650295-2650314 | MS.gene012429:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr8.3:2652337-2652356 | MS.gene012429:intron | 35.0% | |
| GCCATTTCACTTGTAAATGT+GGG | - | chr8.3:2651833-2651852 | MS.gene012429:intron | 35.0% | |
| GGTGTTTGATTCATCCTAAT+TGG | - | chr8.3:2652505-2652524 | MS.gene012429:intron | 35.0% | |
| GTAAAAACTCTACCTTCAGT+GGG | - | chr8.3:2650042-2650061 | MS.gene012429:intron | 35.0% | |
| GTGCATGTGCATAGATAATA+TGG | - | chr8.3:2653277-2653296 | MS.gene012429:intron | 35.0% | |
| GTTGCCTATAAACAAAAGGA+GGG | + | chr8.3:2651604-2651623 | None:intergenic | 35.0% | |
| TAGGAAATTTGGCCATAAAG+AGG | + | chr8.3:2651544-2651563 | None:intergenic | 35.0% | |
| TCACACTAATTAACTGCAGA+AGG | + | chr8.3:2651280-2651299 | None:intergenic | 35.0% | |
| TCCCACATTTACAAGTGAAA+TGG | + | chr8.3:2651837-2651856 | None:intergenic | 35.0% | |
| TGCAGCATCACTACTTATTT+AGG | + | chr8.3:2653560-2653579 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | - | chr8.3:2652336-2652355 | MS.gene012429:intron | 35.0% | |
| TTACCTAGACCAAACTAGTA+TGG | - | chr8.3:2649818-2649837 | MS.gene012429:intron | 35.0% | |
| TTGATACTTGCATGTATGGA+TGG | - | chr8.3:2649455-2649474 | MS.gene012429:intron | 35.0% | |
| TTGATTCAAGTGACACTGAT+AGG | - | chr8.3:2652066-2652085 | MS.gene012429:intron | 35.0% | |
| TTGCCTATAAACAAAAGGAG+GGG | + | chr8.3:2651603-2651622 | None:intergenic | 35.0% | |
| TTGTGGAAAGAAATGCTTTG+TGG | - | chr8.3:2651743-2651762 | MS.gene012429:intron | 35.0% | |
| TTTGAATTAACCTGTGAACC+TGG | - | chr8.3:2650443-2650462 | MS.gene012429:intron | 35.0% | |
| ! | AAACCATACTAGTTTGGTCT+AGG | + | chr8.3:2649824-2649843 | None:intergenic | 35.0% |
| ! | AAGAAGCATACATAGAATGG+TGG | + | chr8.3:2649195-2649214 | None:intergenic | 35.0% |
| ! | ACATAGAATGGTGGTTTTTC+CGG | + | chr8.3:2649186-2649205 | None:intergenic | 35.0% |
| ! | AGTGCTATTGTAATAAGTCC+TGG | - | chr8.3:2650891-2650910 | MS.gene012429:intron | 35.0% |
| ! | ATACTAGTTTGGTCTAGGTA+AGG | + | chr8.3:2649819-2649838 | None:intergenic | 35.0% |
| ! | ATGCACATATTTTCACTAGG+GGG | - | chr8.3:2653188-2653207 | MS.gene012429:intron | 35.0% |
| ! | CTTATTTCTTCTGACCATCT+CGG | - | chr8.3:2651628-2651647 | MS.gene012429:intron | 35.0% |
| ! | GATGCACATATTTTCACTAG+GGG | - | chr8.3:2653187-2653206 | MS.gene012429:intron | 35.0% |
| ! | GGATGCACATATTTTCACTA+GGG | - | chr8.3:2653186-2653205 | MS.gene012429:intron | 35.0% |
| ! | TAAGTTGTTTCCGACTATCA+AGG | + | chr8.3:2652721-2652740 | None:intergenic | 35.0% |
| ! | TGAATTCTTTTCCCATCTTG+TGG | + | chr8.3:2651930-2651949 | None:intergenic | 35.0% |
| ! | TGCCATTTCACTTGTAAATG+TGG | - | chr8.3:2651832-2651851 | MS.gene012429:intron | 35.0% |
| ! | TGGATAATTTTGTCCTCTTC+TGG | - | chr8.3:2650632-2650651 | MS.gene012429:CDS | 35.0% |
| ! | TGGATGCACATATTTTCACT+AGG | - | chr8.3:2653185-2653204 | MS.gene012429:CDS | 35.0% |
| ! | TTCATCTGTTTTCGGTAACA+AGG | - | chr8.3:2649127-2649146 | MS.gene012429:intron | 35.0% |
| ! | TTTTTGTCCATAGGCCATAT+TGG | - | chr8.3:2652003-2652022 | MS.gene012429:intron | 35.0% |
| !! | AAAAAAGGCCTTAGTTTGTC+CGG | + | chr8.3:2650215-2650234 | None:intergenic | 35.0% |
| !! | CTTCACGTAATCTATTTTGG+TGG | + | chr8.3:2652379-2652398 | None:intergenic | 35.0% |
| !! | TTCTTGCATCTTTTGACTGA+TGG | - | chr8.3:2650991-2651010 | MS.gene012429:intron | 35.0% |
| !!! | AAGTTTGCTGGTCTCATTTT+TGG | - | chr8.3:2650570-2650589 | MS.gene012429:intron | 35.0% |
| !!! | ACTAAGGCCTTTTTTCTTAG+AGG | - | chr8.3:2650220-2650239 | MS.gene012429:intron | 35.0% |
| !!! | AGTTTGCTGGTCTCATTTTT+GGG | - | chr8.3:2650571-2650590 | MS.gene012429:intron | 35.0% |
| !!! | TCGTTGTTTTGAATGATTGG+GGG | - | chr8.3:2652540-2652559 | MS.gene012429:intron | 35.0% |
| AAAAAATCACCAGCCAGAAG+AGG | + | chr8.3:2650648-2650667 | None:intergenic | 40.0% | |
| AAAGATGCTGCAGAACTTAG+AGG | - | chr8.3:2651511-2651530 | MS.gene012429:intron | 40.0% | |
| AAGATGCTGCAGAACTTAGA+GGG | - | chr8.3:2651512-2651531 | MS.gene012429:intron | 40.0% | |
| ACACACATCAAGGACTTAGT+AGG | + | chr8.3:2651234-2651253 | None:intergenic | 40.0% | |
| ACTAAAACGCTGGACACAAT+AGG | + | chr8.3:2650083-2650102 | None:intergenic | 40.0% | |
| ACTAGGGGGATAAGAAGTAA+GGG | - | chr8.3:2653202-2653221 | MS.gene012429:intron | 40.0% | |
| ACTTCTGCTATAAAAGGCGA+AGG | - | chr8.3:2653461-2653480 | MS.gene012429:intron | 40.0% | |
| ATTGACACAGTCCTATGAGT+AGG | + | chr8.3:2650485-2650504 | None:intergenic | 40.0% | |
| CAAGTGACCTACTCTACAAA+GGG | + | chr8.3:2650117-2650136 | None:intergenic | 40.0% | |
| CACTAAACATGCAACGACAT+AGG | + | chr8.3:2650022-2650041 | None:intergenic | 40.0% | |
| CATATACCTCCAGAATTGCA+TGG | + | chr8.3:2652115-2652134 | None:intergenic | 40.0% | |
| CGAGATGGTCAGAAGAAATA+AGG | + | chr8.3:2651630-2651649 | None:intergenic | 40.0% | |
| CGTTGCCTATAAACAAAAGG+AGG | + | chr8.3:2651605-2651624 | None:intergenic | 40.0% | |
| CTACAAAAATTGCCCACTGA+AGG | + | chr8.3:2650057-2650076 | None:intergenic | 40.0% | |
| CTATGTCGTTGCATGTTTAG+TGG | - | chr8.3:2650020-2650039 | MS.gene012429:intron | 40.0% | |
| CTCTACAAAGGGATGGAAAT+TGG | + | chr8.3:2650106-2650125 | None:intergenic | 40.0% | |
| GCTATGAAGCTGATATGATC+GGG | - | chr8.3:2653239-2653258 | MS.gene012429:intron | 40.0% | |
| GGAAAGTAACACCTCCAATA+TGG | + | chr8.3:2652020-2652039 | None:intergenic | 40.0% | |
| GGTAAAAACTCTACCTTCAG+TGG | - | chr8.3:2650041-2650060 | MS.gene012429:intron | 40.0% | |
| TAAGTGAGAGTGAGAGACTT+AGG | + | chr8.3:2651666-2651685 | None:intergenic | 40.0% | |
| TACTTGCATGTATGGATGGA+TGG | - | chr8.3:2649459-2649478 | MS.gene012429:intron | 40.0% | |
| TCACAGGAAAATCGAAAACC+AGG | - | chr8.3:2651895-2651914 | MS.gene012429:intron | 40.0% | |
| TGATAGGCTTGTGATAGCTA+GGG | - | chr8.3:2652082-2652101 | MS.gene012429:intron | 40.0% | |
| TGCAATTTACAAGGGATTGG+CGG | - | chr8.3:2652238-2652257 | MS.gene012429:intron | 40.0% | |
| TGCAGCATCTTTCTGTTGTT+GGG | + | chr8.3:2651503-2651522 | None:intergenic | 40.0% | |
| TGGAAATTGGACTAAAACGC+TGG | + | chr8.3:2650093-2650112 | None:intergenic | 40.0% | |
| TGTTGTATAGGATTTGAGCC+TGG | + | chr8.3:2650386-2650405 | None:intergenic | 40.0% | |
| TTTCCATCCCTTTGTAGAGT+AGG | - | chr8.3:2650107-2650126 | MS.gene012429:intron | 40.0% | |
| ! | AAAAGGCGAAGGACTTTTTG+AGG | - | chr8.3:2653472-2653491 | MS.gene012429:intron | 40.0% |
| ! | AAAGGCGAAGGACTTTTTGA+GGG | - | chr8.3:2653473-2653492 | MS.gene012429:intron | 40.0% |
| ! | AGTTTTTCCCGGACAAACTA+AGG | - | chr8.3:2650204-2650223 | MS.gene012429:intron | 40.0% |
| ! | CTTCAGTGGGCAATTTTTGT+AGG | - | chr8.3:2650055-2650074 | MS.gene012429:intron | 40.0% |
| ! | GTAGATCCTGCATAATGGAA+CGG | + | chr8.3:2653361-2653380 | None:intergenic | 40.0% |
| ! | TAATTTTGTCCTCTTCTGGC+TGG | - | chr8.3:2650636-2650655 | MS.gene012429:CDS | 40.0% |
| ! | TCTTTTCCCATCTTGTGGTT+TGG | + | chr8.3:2651925-2651944 | None:intergenic | 40.0% |
| ! | TTCATGCACTCCTTGATAGT+CGG | - | chr8.3:2652708-2652727 | MS.gene012429:intron | 40.0% |
| !! | AAAAAGGCCTTAGTTTGTCC+GGG | + | chr8.3:2650214-2650233 | None:intergenic | 40.0% |
| !! | CAACCCCTCCTTTTGTTTAT+AGG | - | chr8.3:2651597-2651616 | MS.gene012429:intron | 40.0% |
| !! | TTTTCAGATCGGCTTCAGAT+GGG | - | chr8.3:2649274-2649293 | MS.gene012429:CDS | 40.0% |
| !! | TTTTTCAGATCGGCTTCAGA+TGG | - | chr8.3:2649273-2649292 | MS.gene012429:CDS | 40.0% |
| !!! | AGGCCTTTTTTCTTAGAGGT+AGG | - | chr8.3:2650224-2650243 | MS.gene012429:intron | 40.0% |
| !!! | CACGTAATCTATTTTGGTGG+CGG | + | chr8.3:2652376-2652395 | None:intergenic | 40.0% |
| AACACCTCCAATATGGCCTA+TGG | + | chr8.3:2652013-2652032 | None:intergenic | 45.0% | |
| AACGAATAGCTGGTGACTTC+TGG | - | chr8.3:2651063-2651082 | MS.gene012429:intron | 45.0% | |
| AATTTGAACCAGCGTAGCTC+AGG | - | chr8.3:2650252-2650271 | MS.gene012429:intron | 45.0% | |
| ACACAGTCCTATGAGTAGGA+TGG | + | chr8.3:2650481-2650500 | None:intergenic | 45.0% | |
| ATGAAGTGTGTGTGTGTGTG+TGG | + | chr8.3:2652159-2652178 | None:intergenic | 45.0% | |
| CACTAGGGGGATAAGAAGTA+AGG | - | chr8.3:2653201-2653220 | MS.gene012429:intron | 45.0% | |
| CAGCATCTTTCTGTTGTTGG+GGG | + | chr8.3:2651501-2651520 | None:intergenic | 45.0% | |
| CAGGAAAATCGAAAACCAGG+TGG | - | chr8.3:2651898-2651917 | MS.gene012429:intron | 45.0% | |
| CTGATAGGCTTGTGATAGCT+AGG | - | chr8.3:2652081-2652100 | MS.gene012429:intron | 45.0% | |
| CTGCAGCATCTTTCTGTTGT+TGG | + | chr8.3:2651504-2651523 | None:intergenic | 45.0% | |
| CTTACCTCCATCCTACTCAT+AGG | - | chr8.3:2650471-2650490 | MS.gene012429:intron | 45.0% | |
| GAAGCTCGAATTCTCGTTCT+CGG | - | chr8.3:2649149-2649168 | MS.gene012429:intron | 45.0% | |
| GAGCAAGTTATCTGAGCTTG+AGG | + | chr8.3:2650337-2650356 | None:intergenic | 45.0% | |
| GCAAGTGACCTACTCTACAA+AGG | + | chr8.3:2650118-2650137 | None:intergenic | 45.0% | |
| GCAGCATCTTTCTGTTGTTG+GGG | + | chr8.3:2651502-2651521 | None:intergenic | 45.0% | |
| GCATGTCAGAACTACTGCTT+GGG | + | chr8.3:2651815-2651834 | None:intergenic | 45.0% | |
| GTGGGTGTATGTGTTGTATC+AGG | + | chr8.3:2652140-2652159 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGAATGTGT+AGG | - | chr8.3:2651314-2651333 | MS.gene012429:intron | 45.0% | |
| TAAGCGTCTCCTAAGCTAAG+AGG | - | chr8.3:2652455-2652474 | MS.gene012429:intron | 45.0% | |
| TCCATTATGCAGGATCTACC+AGG | - | chr8.3:2653362-2653381 | MS.gene012429:intron | 45.0% | |
| TGAAGTGTGTGTGTGTGTGT+GGG | + | chr8.3:2652158-2652177 | None:intergenic | 45.0% | |
| TGACCTACTCTACAAAGGGA+TGG | + | chr8.3:2650113-2650132 | None:intergenic | 45.0% | |
| TGTATGGATGGATGGCTGAT+TGG | - | chr8.3:2649467-2649486 | MS.gene012429:intron | 45.0% | |
| TGTGTACCGTTCCATTATGC+AGG | - | chr8.3:2653352-2653371 | MS.gene012429:intron | 45.0% | |
| TTGCTTGAGCTTAATGAGCC+AGG | - | chr8.3:2650365-2650384 | MS.gene012429:intron | 45.0% | |
| TTGTCCATAGGCCATATTGG+AGG | - | chr8.3:2652006-2652025 | MS.gene012429:intron | 45.0% | |
| ! | GAGAGACTTAGGTTAGTTGC+TGG | + | chr8.3:2651655-2651674 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr8.3:2652309-2652328 | MS.gene012429:intron | 45.0% |
| ! | TTTCAGATCGGCTTCAGATG+GGG | - | chr8.3:2649275-2649294 | MS.gene012429:CDS | 45.0% |
| !! | GACTTTTTGAGGGACTTGAC+TGG | - | chr8.3:2653483-2653502 | MS.gene012429:intron | 45.0% |
| !!! | AATCTATTTTGGTGGCGGCT+GGG | + | chr8.3:2652371-2652390 | None:intergenic | 45.0% |
| !!! | TAATCTATTTTGGTGGCGGC+TGG | + | chr8.3:2652372-2652391 | None:intergenic | 45.0% |
| AACGAGATCGGGTACGAACT+TGG | + | chr8.3:2649319-2649338 | None:intergenic | 50.0% | |
| AACTGCGGTAGCTCATGTTG+TGG | - | chr8.3:2651726-2651745 | MS.gene012429:intron | 50.0% | |
| AGAGGGTCTGCACCTCTTTA+TGG | - | chr8.3:2651529-2651548 | MS.gene012429:intron | 50.0% | |
| AGGTGGACCAAACCACAAGA+TGG | - | chr8.3:2651915-2651934 | MS.gene012429:intron | 50.0% | |
| CAGGTGGGCAAACAAGTATC+AGG | - | chr8.3:2650951-2650970 | MS.gene012429:intron | 50.0% | |
| CAGTCCTATGAGTAGGATGG+AGG | + | chr8.3:2650478-2650497 | None:intergenic | 50.0% | |
| CGTCACTGCAGCATCATCAA+GGG | + | chr8.3:2653390-2653409 | None:intergenic | 50.0% | |
| GATCGGGTACGAACTTGGAA+TGG | + | chr8.3:2649314-2649333 | None:intergenic | 50.0% | |
| GCCTGGTAGATCCTGCATAA+TGG | + | chr8.3:2653366-2653385 | None:intergenic | 50.0% | |
| GGAGGAGTTCCATGCAATTC+TGG | - | chr8.3:2652103-2652122 | MS.gene012429:intron | 50.0% | |
| GGAGTTCCATGCAATTCTGG+AGG | - | chr8.3:2652106-2652125 | MS.gene012429:intron | 50.0% | |
| GGCATGTCAGAACTACTGCT+TGG | + | chr8.3:2651816-2651835 | None:intergenic | 50.0% | |
| GGTGGACCAAACCACAAGAT+GGG | - | chr8.3:2651916-2651935 | MS.gene012429:intron | 50.0% | |
| GTAAGTCAAGCCAGGTTCAC+AGG | + | chr8.3:2650456-2650475 | None:intergenic | 50.0% | |
| GTTCTCGGTCTTGACAATGC+CGG | - | chr8.3:2649164-2649183 | MS.gene012429:intron | 50.0% | |
| TAGGCTTGTGATAGCTAGGG+AGG | - | chr8.3:2652085-2652104 | MS.gene012429:intron | 50.0% | |
| ! | TTCAGATCGGCTTCAGATGG+GGG | - | chr8.3:2649276-2649295 | MS.gene012429:CDS | 50.0% |
| !! | ATCTTGTGGTTTGGTCCACC+TGG | + | chr8.3:2651916-2651935 | None:intergenic | 50.0% |
| !! | CCTTGATGATGCTGCAGTGA+CGG | - | chr8.3:2653388-2653407 | MS.gene012429:intron | 50.0% |
| !!! | ATCTATTTTGGTGGCGGCTG+GGG | + | chr8.3:2652370-2652389 | None:intergenic | 50.0% |
| AAGCCAAACCTGAGCTACGC+TGG | + | chr8.3:2650263-2650282 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr8.3:2652307-2652326 | None:intergenic | 55.0% | |
| CCGTCACTGCAGCATCATCA+AGG | + | chr8.3:2653391-2653410 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr8.3:2652304-2652323 | MS.gene012429:intron | 55.0% | |
| GAACCAGCGTAGCTCAGGTT+TGG | - | chr8.3:2650257-2650276 | MS.gene012429:intron | 55.0% | |
| GGATGGAGGTAAGTCAAGCC+AGG | + | chr8.3:2650464-2650483 | None:intergenic | 55.0% | |
| GGGGGATAAGAAGTAAGGGC+TGG | - | chr8.3:2653206-2653225 | MS.gene012429:intron | 55.0% | |
| ! | GGTTAGTTGCTGGACCGAGA+TGG | + | chr8.3:2651645-2651664 | None:intergenic | 55.0% |
| !! | GCAGCATCATCAAGGGCGCC+TGG | + | chr8.3:2653383-2653402 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 2649101 | 2653615 | 2649101 | ID=MS.gene012429 |
| chr8.3 | mRNA | 2649101 | 2653615 | 2649101 | ID=MS.gene012429.t1;Parent=MS.gene012429 |
| chr8.3 | exon | 2653513 | 2653615 | 2653513 | ID=MS.gene012429.t1.exon1;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2653513 | 2653615 | 2653513 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| chr8.3 | exon | 2653397 | 2653435 | 2653397 | ID=MS.gene012429.t1.exon2;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2653397 | 2653435 | 2653397 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| chr8.3 | exon | 2653142 | 2653204 | 2653142 | ID=MS.gene012429.t1.exon3;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2653142 | 2653204 | 2653142 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| chr8.3 | exon | 2651744 | 2651762 | 2651744 | ID=MS.gene012429.t1.exon4;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2651744 | 2651762 | 2651744 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| chr8.3 | exon | 2650589 | 2650700 | 2650589 | ID=MS.gene012429.t1.exon5;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2650589 | 2650700 | 2650589 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| chr8.3 | exon | 2649555 | 2649602 | 2649555 | ID=MS.gene012429.t1.exon6;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2649555 | 2649602 | 2649555 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| chr8.3 | exon | 2649212 | 2649342 | 2649212 | ID=MS.gene012429.t1.exon7;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2649212 | 2649342 | 2649212 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| chr8.3 | exon | 2649101 | 2649107 | 2649101 | ID=MS.gene012429.t1.exon8;Parent=MS.gene012429.t1 |
| chr8.3 | CDS | 2649101 | 2649107 | 2649101 | ID=cds.MS.gene012429.t1;Parent=MS.gene012429.t1 |
| Gene Sequence |
| Protein sequence |
