Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78539.t1 | XP_003616274.1 | 100 | 184 | 0 | 0 | 1 | 184 | 1 | 184 | 5.70E-99 | 370.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78539.t1 | Q8W4C8 | 94.0 | 183 | 11 | 0 | 1 | 183 | 1 | 183 | 1.6e-97 | 356.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78539.t1 | G7K1N4 | 100.0 | 184 | 0 | 0 | 1 | 184 | 1 | 184 | 4.1e-99 | 370.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050680 | MS.gene78539 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene78539 | 0.807384 | 5.19E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene78539 | 0.803254 | 3.81E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene78539 | 0.804864 | 1.76E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene78539 | 0.823586 | 1.28E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene78539 | 0.817588 | 3.05E-52 | -1.69E-46 |
| MS.gene059161 | MS.gene78539 | 0.816615 | 5.05E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene78539 | 0.802147 | 6.44E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78539.t1 | MTR_5g078090 | 100.000 | 184 | 0 | 0 | 1 | 184 | 1 | 184 | 1.51e-135 | 376 |
| MS.gene78539.t1 | MTR_5g015370 | 82.967 | 182 | 31 | 0 | 1 | 182 | 1 | 182 | 8.90e-114 | 321 |
| MS.gene78539.t1 | MTR_4g026950 | 76.970 | 165 | 38 | 0 | 20 | 184 | 1 | 165 | 9.43e-95 | 272 |
| MS.gene78539.t1 | MTR_7g109960 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 3.53e-31 | 111 |
| MS.gene78539.t1 | MTR_1g086480 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.02e-31 | 111 |
| MS.gene78539.t1 | MTR_6g005820 | 34.091 | 176 | 113 | 2 | 1 | 176 | 1 | 173 | 9.12e-31 | 110 |
| MS.gene78539.t1 | MTR_5g034130 | 34.091 | 176 | 113 | 2 | 1 | 176 | 1 | 173 | 1.07e-30 | 110 |
| MS.gene78539.t1 | MTR_5g034125 | 34.091 | 176 | 113 | 2 | 1 | 176 | 1 | 173 | 1.07e-30 | 110 |
| MS.gene78539.t1 | MTR_5g016540 | 34.337 | 166 | 108 | 1 | 11 | 176 | 9 | 173 | 1.44e-30 | 110 |
| MS.gene78539.t1 | MTR_4g128910 | 34.940 | 166 | 107 | 1 | 11 | 176 | 9 | 173 | 3.76e-30 | 109 |
| MS.gene78539.t1 | MTR_2g022200 | 32.240 | 183 | 111 | 2 | 2 | 178 | 7 | 182 | 2.46e-28 | 105 |
| MS.gene78539.t1 | MTR_1g076550 | 38.028 | 142 | 87 | 1 | 14 | 155 | 12 | 152 | 3.18e-28 | 104 |
| MS.gene78539.t1 | MTR_4g077640 | 34.965 | 143 | 92 | 1 | 13 | 155 | 11 | 152 | 3.82e-27 | 101 |
| MS.gene78539.t1 | MTR_5g007810 | 32.168 | 143 | 96 | 1 | 13 | 155 | 11 | 152 | 2.81e-25 | 97.1 |
| MS.gene78539.t1 | MTR_5g007820 | 35.172 | 145 | 91 | 2 | 13 | 155 | 11 | 154 | 7.01e-25 | 95.9 |
| MS.gene78539.t1 | MTR_8g077540 | 32.919 | 161 | 104 | 3 | 20 | 178 | 17 | 175 | 1.73e-23 | 92.0 |
| MS.gene78539.t1 | MTR_4g121860 | 36.296 | 135 | 85 | 1 | 17 | 151 | 18 | 151 | 3.44e-23 | 91.7 |
| MS.gene78539.t1 | MTR_8g077540 | 32.919 | 161 | 104 | 3 | 20 | 178 | 43 | 201 | 6.98e-23 | 91.3 |
| MS.gene78539.t1 | MTR_7g112090 | 36.184 | 152 | 95 | 2 | 1 | 151 | 1 | 151 | 2.05e-22 | 89.4 |
| MS.gene78539.t1 | MTR_2g034640 | 35.570 | 149 | 94 | 2 | 1 | 148 | 1 | 148 | 2.65e-22 | 89.4 |
| MS.gene78539.t1 | MTR_8g077540 | 36.842 | 95 | 59 | 1 | 20 | 114 | 17 | 110 | 1.63e-15 | 70.1 |
| MS.gene78539.t1 | MTR_7g081700 | 34.375 | 160 | 87 | 6 | 20 | 170 | 9 | 159 | 1.42e-14 | 68.9 |
| MS.gene78539.t1 | MTR_8g006970 | 33.750 | 160 | 88 | 6 | 20 | 170 | 9 | 159 | 1.90e-14 | 68.2 |
| MS.gene78539.t1 | MTR_2g005500 | 30.000 | 160 | 94 | 5 | 20 | 170 | 10 | 160 | 6.11e-14 | 67.4 |
| MS.gene78539.t1 | MTR_8g006970 | 33.750 | 160 | 88 | 6 | 20 | 170 | 23 | 173 | 7.11e-14 | 67.4 |
| MS.gene78539.t1 | MTR_5g007840 | 29.333 | 150 | 92 | 3 | 13 | 161 | 11 | 147 | 1.86e-13 | 66.2 |
| MS.gene78539.t1 | MTR_7g103070 | 32.727 | 165 | 89 | 9 | 24 | 176 | 21 | 175 | 8.36e-13 | 64.3 |
| MS.gene78539.t1 | MTR_1g062760 | 32.099 | 162 | 93 | 7 | 24 | 176 | 19 | 172 | 1.97e-12 | 63.5 |
| MS.gene78539.t1 | MTR_1g029450 | 31.034 | 174 | 97 | 9 | 16 | 177 | 14 | 176 | 1.99e-12 | 63.5 |
| MS.gene78539.t1 | MTR_7g100020 | 31.707 | 164 | 93 | 6 | 20 | 173 | 16 | 170 | 3.40e-12 | 62.8 |
| MS.gene78539.t1 | MTR_4g099470 | 35.965 | 114 | 63 | 4 | 44 | 148 | 9 | 121 | 4.65e-12 | 62.0 |
| MS.gene78539.t1 | MTR_1g068730 | 30.488 | 164 | 95 | 6 | 20 | 173 | 16 | 170 | 5.58e-12 | 62.4 |
| MS.gene78539.t1 | MTR_1g115325 | 30.488 | 164 | 95 | 6 | 20 | 173 | 16 | 170 | 6.49e-12 | 62.0 |
| MS.gene78539.t1 | MTR_3g096350 | 30.460 | 174 | 98 | 9 | 16 | 177 | 9 | 171 | 1.02e-11 | 61.2 |
| MS.gene78539.t1 | MTR_3g096350 | 29.452 | 146 | 87 | 6 | 16 | 151 | 9 | 148 | 1.30e-11 | 60.1 |
| MS.gene78539.t1 | MTR_8g093740 | 30.058 | 173 | 100 | 9 | 16 | 177 | 10 | 172 | 2.28e-11 | 60.5 |
| MS.gene78539.t1 | MTR_1g068740 | 29.878 | 164 | 96 | 6 | 20 | 173 | 16 | 170 | 2.38e-11 | 60.5 |
| MS.gene78539.t1 | MTR_2g096550 | 26.061 | 165 | 104 | 4 | 16 | 170 | 12 | 168 | 4.89e-11 | 59.7 |
| MS.gene78539.t1 | MTR_8g103550 | 28.235 | 170 | 114 | 4 | 19 | 184 | 9 | 174 | 4.98e-11 | 59.3 |
| MS.gene78539.t1 | MTR_1g068730 | 30.128 | 156 | 100 | 5 | 20 | 171 | 16 | 166 | 6.86e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78539.t1 | AT5G37680 | 93.989 | 183 | 11 | 0 | 1 | 183 | 1 | 183 | 3.22e-130 | 363 |
| MS.gene78539.t1 | AT5G67560 | 80.978 | 184 | 35 | 0 | 1 | 184 | 1 | 184 | 7.66e-113 | 319 |
| MS.gene78539.t1 | AT3G49870 | 79.891 | 184 | 37 | 0 | 1 | 184 | 1 | 184 | 2.22e-110 | 313 |
| MS.gene78539.t1 | AT3G49870 | 80.000 | 165 | 33 | 0 | 20 | 184 | 1 | 165 | 6.10e-98 | 280 |
| MS.gene78539.t1 | AT5G37680 | 92.647 | 136 | 10 | 0 | 48 | 183 | 1 | 136 | 4.90e-94 | 270 |
| MS.gene78539.t1 | AT3G49860 | 70.659 | 167 | 49 | 0 | 18 | 184 | 10 | 176 | 1.78e-85 | 249 |
| MS.gene78539.t1 | AT1G10630 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 3.82e-31 | 111 |
| MS.gene78539.t1 | AT1G10630 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 3.82e-31 | 111 |
| MS.gene78539.t1 | AT1G70490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT1G70490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT1G70490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT1G70490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT1G70490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT1G70490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT1G23490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT1G70490 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 4.74e-31 | 111 |
| MS.gene78539.t1 | AT3G62290 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 7.06e-31 | 111 |
| MS.gene78539.t1 | AT3G62290 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 7.06e-31 | 111 |
| MS.gene78539.t1 | AT3G62290 | 34.659 | 176 | 112 | 2 | 1 | 176 | 1 | 173 | 7.06e-31 | 111 |
| MS.gene78539.t1 | AT5G14670 | 34.969 | 163 | 105 | 1 | 14 | 176 | 12 | 173 | 1.13e-30 | 110 |
| MS.gene78539.t1 | AT5G14670 | 34.969 | 163 | 105 | 1 | 14 | 176 | 12 | 173 | 1.13e-30 | 110 |
| MS.gene78539.t1 | AT2G47170 | 34.969 | 163 | 105 | 1 | 14 | 176 | 12 | 173 | 1.17e-30 | 110 |
| MS.gene78539.t1 | AT2G47170 | 34.969 | 163 | 105 | 1 | 14 | 176 | 12 | 173 | 1.17e-30 | 110 |
| MS.gene78539.t1 | AT2G47170 | 34.969 | 163 | 105 | 1 | 14 | 176 | 12 | 173 | 1.17e-30 | 110 |
| MS.gene78539.t1 | AT5G14670 | 34.969 | 163 | 105 | 1 | 14 | 176 | 12 | 173 | 1.35e-30 | 110 |
| MS.gene78539.t1 | AT2G24765 | 32.530 | 166 | 111 | 1 | 11 | 176 | 9 | 173 | 2.35e-28 | 104 |
| MS.gene78539.t1 | AT5G52210 | 32.967 | 182 | 109 | 2 | 2 | 177 | 7 | 181 | 3.78e-28 | 104 |
| MS.gene78539.t1 | AT5G52210 | 32.967 | 182 | 109 | 2 | 2 | 177 | 7 | 181 | 3.78e-28 | 104 |
| MS.gene78539.t1 | AT5G17060 | 34.266 | 143 | 93 | 1 | 13 | 155 | 11 | 152 | 2.94e-27 | 102 |
| MS.gene78539.t1 | AT5G17060 | 34.266 | 143 | 93 | 1 | 13 | 155 | 11 | 152 | 2.94e-27 | 102 |
| MS.gene78539.t1 | AT3G22950 | 36.620 | 142 | 89 | 1 | 14 | 155 | 12 | 152 | 3.24e-27 | 101 |
| MS.gene78539.t1 | AT3G22950 | 36.620 | 142 | 89 | 1 | 14 | 155 | 12 | 152 | 3.24e-27 | 101 |
| MS.gene78539.t1 | AT3G03120 | 33.566 | 143 | 94 | 1 | 13 | 155 | 11 | 152 | 1.63e-26 | 100 |
| MS.gene78539.t1 | AT2G15310 | 30.921 | 152 | 101 | 2 | 17 | 168 | 15 | 162 | 7.61e-25 | 96.3 |
| MS.gene78539.t1 | AT2G24765 | 35.000 | 120 | 77 | 1 | 11 | 130 | 9 | 127 | 4.13e-23 | 89.7 |
| MS.gene78539.t1 | AT3G03120 | 34.167 | 120 | 78 | 1 | 13 | 132 | 11 | 129 | 4.48e-23 | 89.7 |
| MS.gene78539.t1 | AT3G62560 | 36.296 | 135 | 85 | 1 | 17 | 151 | 18 | 151 | 2.63e-22 | 89.4 |
| MS.gene78539.t1 | AT4G02080 | 35.556 | 135 | 86 | 1 | 17 | 151 | 18 | 151 | 4.83e-22 | 88.6 |
| MS.gene78539.t1 | AT1G56330 | 35.570 | 149 | 94 | 2 | 1 | 148 | 1 | 148 | 7.30e-22 | 88.2 |
| MS.gene78539.t1 | AT2G18390 | 32.919 | 161 | 104 | 3 | 20 | 178 | 17 | 175 | 8.13e-22 | 87.8 |
| MS.gene78539.t1 | AT1G09180 | 36.184 | 152 | 95 | 2 | 1 | 151 | 1 | 151 | 6.16e-21 | 85.9 |
| MS.gene78539.t1 | AT1G02440 | 26.667 | 180 | 123 | 4 | 11 | 181 | 9 | 188 | 2.73e-17 | 76.3 |
| MS.gene78539.t1 | AT1G02430 | 25.989 | 177 | 122 | 4 | 14 | 181 | 12 | 188 | 8.21e-16 | 72.0 |
| MS.gene78539.t1 | AT1G02430 | 26.712 | 146 | 102 | 2 | 14 | 154 | 12 | 157 | 9.09e-16 | 71.2 |
| MS.gene78539.t1 | AT1G02130 | 33.125 | 160 | 89 | 5 | 20 | 170 | 9 | 159 | 1.64e-14 | 68.9 |
| MS.gene78539.t1 | AT1G43890 | 32.927 | 164 | 91 | 9 | 24 | 177 | 18 | 172 | 2.47e-14 | 68.6 |
| MS.gene78539.t1 | AT1G43890 | 32.927 | 164 | 91 | 9 | 24 | 177 | 18 | 172 | 2.47e-14 | 68.6 |
| MS.gene78539.t1 | AT1G43890 | 32.927 | 164 | 91 | 9 | 24 | 177 | 18 | 172 | 2.47e-14 | 68.6 |
| MS.gene78539.t1 | AT3G11730 | 31.250 | 160 | 92 | 5 | 20 | 170 | 9 | 159 | 2.87e-14 | 68.2 |
| MS.gene78539.t1 | AT4G17530 | 32.500 | 160 | 90 | 5 | 20 | 170 | 9 | 159 | 1.51e-13 | 66.2 |
| MS.gene78539.t1 | AT5G47200 | 32.500 | 160 | 90 | 5 | 20 | 170 | 9 | 159 | 3.34e-13 | 65.5 |
| MS.gene78539.t1 | AT5G59840 | 30.233 | 172 | 101 | 6 | 20 | 181 | 16 | 178 | 3.12e-12 | 63.2 |
| MS.gene78539.t1 | AT3G46060 | 29.268 | 164 | 97 | 5 | 20 | 173 | 16 | 170 | 3.86e-12 | 62.8 |
| MS.gene78539.t1 | AT3G46060 | 29.268 | 164 | 97 | 5 | 20 | 173 | 16 | 170 | 3.86e-12 | 62.8 |
| MS.gene78539.t1 | AT3G46060 | 29.268 | 164 | 97 | 5 | 20 | 173 | 16 | 170 | 3.86e-12 | 62.8 |
| MS.gene78539.t1 | AT3G53610 | 29.651 | 172 | 102 | 6 | 20 | 181 | 16 | 178 | 4.45e-12 | 62.8 |
| MS.gene78539.t1 | AT3G53610 | 29.651 | 172 | 102 | 6 | 20 | 181 | 16 | 178 | 4.45e-12 | 62.8 |
| MS.gene78539.t1 | AT3G53610 | 29.651 | 172 | 102 | 6 | 20 | 181 | 16 | 178 | 4.45e-12 | 62.8 |
| MS.gene78539.t1 | AT5G03530 | 31.757 | 148 | 84 | 8 | 24 | 163 | 18 | 156 | 6.96e-11 | 59.3 |
| MS.gene78539.t1 | AT5G03530 | 31.757 | 148 | 84 | 8 | 24 | 163 | 18 | 156 | 6.96e-11 | 59.3 |
Find 31 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAATTCGCTTCGAGTTAT+TGG | 0.124309 | 5.1:+60502800 | None:intergenic |
| GGGATTCCTTTGCTTGTTCT+TGG | 0.246105 | 5.1:-60502749 | MS.gene78539:CDS |
| ACAATAAAGCTTTGGGATCT+TGG | 0.278062 | 5.1:-60506095 | MS.gene78539:CDS |
| TCTGGGATTCTCTTCTCAAT+TGG | 0.329088 | 5.1:-60506813 | MS.gene78539:CDS |
| ATTCTCAACAAATGGGTCTC+TGG | 0.360022 | 5.1:-60506831 | None:intergenic |
| GAAATGTCACAATAAAGCTT+TGG | 0.389200 | 5.1:-60506103 | MS.gene78539:CDS |
| CTGACAAAGCCTTCCTTGAA+TGG | 0.389916 | 5.1:-60502770 | MS.gene78539:CDS |
| CATTCAAGGAAGGCTTTGTC+AGG | 0.415950 | 5.1:+60502771 | None:intergenic |
| TTGATCTACCAATGCTTGCT+TGG | 0.418148 | 5.1:+60502697 | None:intergenic |
| AAATGTCACAATAAAGCTTT+GGG | 0.418458 | 5.1:-60506102 | MS.gene78539:CDS |
| CTCTTCTCAATTGGCTCCGC+AGG | 0.421148 | 5.1:-60506804 | MS.gene78539:intron |
| GAGATGGAGCTGTCTCTTGT+AGG | 0.450824 | 5.1:-60506448 | MS.gene78539:CDS |
| TGACAAAGCCTTCCTTGAAT+GGG | 0.453079 | 5.1:-60502769 | MS.gene78539:CDS |
| TTCTCAACAAATGGGTCTCT+GGG | 0.469026 | 5.1:-60506830 | None:intergenic |
| CTTGTAGGTCTTCAGAATGC+TGG | 0.494726 | 5.1:-60506433 | MS.gene78539:CDS |
| TTGCTACATGATTTCATGCA+AGG | 0.505231 | 5.1:-60502504 | MS.gene78539:CDS |
| AAGCAAAGGAATCCCATTCA+AGG | 0.513568 | 5.1:+60502757 | None:intergenic |
| AGCTCTTTCCAAGCAAGCAT+TGG | 0.513878 | 5.1:-60502705 | MS.gene78539:CDS |
| ACATAGATGTGGTCATCGAC+TGG | 0.530688 | 5.1:-60502472 | MS.gene78539:CDS |
| TTTGGGATCTTGGTGGTCAA+CGG | 0.548867 | 5.1:-60506085 | MS.gene78539:CDS |
| ATAAAGCTTTGGGATCTTGG+TGG | 0.559424 | 5.1:-60506092 | MS.gene78539:CDS |
| AATATGCGAAAAGTGACAAA+GGG | 0.561008 | 5.1:-60506125 | MS.gene78539:CDS |
| TTGTTTCCAAGAACAAGCAA+AGG | 0.570676 | 5.1:+60502743 | None:intergenic |
| ATGTGGGAGCGCTACTGTCG+CGG | 0.588919 | 5.1:-60506050 | MS.gene78539:CDS |
| CAATATGCGAAAAGTGACAA+AGG | 0.599692 | 5.1:-60506126 | MS.gene78539:CDS |
| GGGATCTTGGTGGTCAACGG+AGG | 0.604641 | 5.1:-60506082 | MS.gene78539:CDS |
| AAAGGAATCCCATTCAAGGA+AGG | 0.619227 | 5.1:+60502761 | None:intergenic |
| ACGGAGGTTTCGAACAATGT+GGG | 0.644507 | 5.1:-60506066 | MS.gene78539:CDS |
| GGATTCTGTAAACATAGATG+TGG | 0.658596 | 5.1:-60502483 | MS.gene78539:CDS |
| AACGGAGGTTTCGAACAATG+TGG | 0.660702 | 5.1:-60506067 | MS.gene78539:CDS |
| TGAGTCAATTAAAGACAGAG+AGG | 0.706022 | 5.1:-60502531 | MS.gene78539:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACAATAAAAAAAACAT+GGG | + | chr5.1:60503558-60503577 | None:intergenic | 10.0% |
| !! | AAAGAAATAAGAATAAAGAA+AGG | + | chr5.1:60502497-60502516 | None:intergenic | 15.0% |
| !! | AAATTCATACAAAATTACTT+GGG | + | chr5.1:60502737-60502756 | None:intergenic | 15.0% |
| !! | AGAAATTATAGATGATTATT+AGG | - | chr5.1:60504025-60504044 | MS.gene78539:intron | 15.0% |
| !! | CATAAACAATAAAAAAAACA+TGG | + | chr5.1:60503559-60503578 | None:intergenic | 15.0% |
| !! | TAACATAGAATTTAAATGTT+GGG | - | chr5.1:60503683-60503702 | MS.gene78539:intron | 15.0% |
| !!! | GTATATAGTTAATGTTTTTT+GGG | - | chr5.1:60503354-60503373 | MS.gene78539:intron | 15.0% |
| !!! | TAATTTTAACTCATTATTAC+TGG | - | chr5.1:60502906-60502925 | MS.gene78539:intron | 15.0% |
| !!! | TGTATATAGTTAATGTTTTT+TGG | - | chr5.1:60503353-60503372 | MS.gene78539:intron | 15.0% |
| !!! | TTTTATGAATAAATAGAGAA+AGG | + | chr5.1:60506254-60506273 | None:intergenic | 15.0% |
| !! | AACATAGCATAGAAATATAA+AGG | - | chr5.1:60506032-60506051 | MS.gene78539:intron | 20.0% |
| !! | ACAAGTTAAGAATCTAAAAA+TGG | - | chr5.1:60503402-60503421 | MS.gene78539:intron | 20.0% |
| !! | ACAGAATTATAAGAAAACAA+AGG | - | chr5.1:60506127-60506146 | MS.gene78539:CDS | 20.0% |
| !! | ACATTTGAATTCAGAATTTA+AGG | - | chr5.1:60503058-60503077 | MS.gene78539:intron | 20.0% |
| !! | ATCATATGATATATAGTAAC+TGG | + | chr5.1:60502566-60502585 | None:intergenic | 20.0% |
| !! | CAAATTCATACAAAATTACT+TGG | + | chr5.1:60502738-60502757 | None:intergenic | 20.0% |
| !! | GATAGTTATTAAATGGTTAT+GGG | + | chr5.1:60506211-60506230 | None:intergenic | 20.0% |
| !! | GTAACATAGAATTTAAATGT+TGG | - | chr5.1:60503682-60503701 | MS.gene78539:intron | 20.0% |
| !! | TAAAGATAAAGTTACCTTAT+TGG | + | chr5.1:60505222-60505241 | None:intergenic | 20.0% |
| !! | TTACTCTAATACAAATTTAG+AGG | + | chr5.1:60502651-60502670 | None:intergenic | 20.0% |
| !! | TTTATTATCAAGATGTAGAT+TGG | - | chr5.1:60505982-60506001 | MS.gene78539:intron | 20.0% |
| !!! | ACAATAATGATGATGATTTT+CGG | + | chr5.1:60506616-60506635 | None:intergenic | 20.0% |
| !!! | ATCTTGATAATAAAAAACAG+TGG | + | chr5.1:60505976-60505995 | None:intergenic | 20.0% |
| !!! | CAAAAATAGAAACATTTTGT+TGG | + | chr5.1:60503496-60503515 | None:intergenic | 20.0% |
| !!! | CAACAAAATGTTTCTATTTT+TGG | - | chr5.1:60503494-60503513 | MS.gene78539:intron | 20.0% |
| !!! | CTTATTTTTTAAACAAGAGA+TGG | - | chr5.1:60502798-60502817 | MS.gene78539:CDS | 20.0% |
| ! | AAAAGCTAACAATTCTTCAA+AGG | + | chr5.1:60504784-60504803 | None:intergenic | 25.0% |
| ! | AAAATTGCGAATAACCAAAT+TGG | + | chr5.1:60502678-60502697 | None:intergenic | 25.0% |
| ! | AAAGCTAACAATTCTTCAAA+GGG | + | chr5.1:60504783-60504802 | None:intergenic | 25.0% |
| ! | AAAGTAAAGATACTTACAGT+TGG | + | chr5.1:60503032-60503051 | None:intergenic | 25.0% |
| ! | AAATGTCACAATAAAGCTTT+GGG | - | chr5.1:60503160-60503179 | MS.gene78539:intron | 25.0% |
| ! | AACCTTCAAAAAAATGACAA+AGG | + | chr5.1:60503317-60503336 | None:intergenic | 25.0% |
| ! | AAGAATAAAGAAAGGAAAGT+GGG | + | chr5.1:60502489-60502508 | None:intergenic | 25.0% |
| ! | AATATAATTGGGTCAAAACT+TGG | - | chr5.1:60505130-60505149 | MS.gene78539:intron | 25.0% |
| ! | ATGATATATAGTAACTGGAA+TGG | + | chr5.1:60502561-60502580 | None:intergenic | 25.0% |
| ! | ATTAGAGTAAAGATCCAATT+TGG | - | chr5.1:60502661-60502680 | MS.gene78539:intron | 25.0% |
| ! | ATTGGACATATTTATACAAG+TGG | + | chr5.1:60504202-60504221 | None:intergenic | 25.0% |
| ! | CAAAATTGTTCAATAGAAGT+CGG | + | chr5.1:60506064-60506083 | None:intergenic | 25.0% |
| ! | GGAGAAATAAGAAAATACTA+AGG | - | chr5.1:60503651-60503670 | MS.gene78539:intron | 25.0% |
| ! | GGATAGTTATTAAATGGTTA+TGG | + | chr5.1:60506212-60506231 | None:intergenic | 25.0% |
| ! | TAAGAATAAAGAAAGGAAAG+TGG | + | chr5.1:60502490-60502509 | None:intergenic | 25.0% |
| ! | TAAGGTAACTTTATCTTTAG+TGG | - | chr5.1:60505223-60505242 | MS.gene78539:intron | 25.0% |
| ! | TACTTGTCATTCTTAGAATT+TGG | + | chr5.1:60504314-60504333 | None:intergenic | 25.0% |
| ! | TCAACAGTTTGTCTATATAT+TGG | + | chr5.1:60505374-60505393 | None:intergenic | 25.0% |
| ! | TCTTATCAGAGAACAATATA+AGG | + | chr5.1:60506292-60506311 | None:intergenic | 25.0% |
| ! | TCTTGAATTTCTTGAAGAAT+AGG | + | chr5.1:60506172-60506191 | None:intergenic | 25.0% |
| ! | TGAAGTAGACTCTTATAAAA+CGG | - | chr5.1:60504733-60504752 | MS.gene78539:intron | 25.0% |
| ! | TGAATAAATAGAGAAAGGAA+AGG | + | chr5.1:60506249-60506268 | None:intergenic | 25.0% |
| ! | TGGTTATAAAAACAAGTATC+AGG | + | chr5.1:60505956-60505975 | None:intergenic | 25.0% |
| ! | TTTATTATAAACCCTATAGC+TGG | - | chr5.1:60503957-60503976 | MS.gene78539:intron | 25.0% |
| !! | AAATTCTAAGAATGACAAGT+AGG | - | chr5.1:60504313-60504332 | MS.gene78539:intron | 25.0% |
| !! | AATTCTAAGAATGACAAGTA+GGG | - | chr5.1:60504314-60504333 | MS.gene78539:intron | 25.0% |
| !! | ACCTATTCTAGATCTAAAAT+TGG | - | chr5.1:60504175-60504194 | MS.gene78539:intron | 25.0% |
| !! | TCGGTTAGTCAAATATAATT+GGG | - | chr5.1:60505119-60505138 | MS.gene78539:intron | 25.0% |
| !! | TTCGGTTAGTCAAATATAAT+TGG | - | chr5.1:60505118-60505137 | MS.gene78539:intron | 25.0% |
| !!! | CTGATACTCTTTTTTTTGAA+CGG | - | chr5.1:60505551-60505570 | MS.gene78539:intron | 25.0% |
| !!! | GAATTTTGCTATTGAACTTT+AGG | - | chr5.1:60503106-60503125 | MS.gene78539:intron | 25.0% |
| !!! | GTTAATATGGTGTTGTTATA+AGG | - | chr5.1:60503781-60503800 | MS.gene78539:intron | 25.0% |
| !!! | GTTTCATTTTTCAATGAATG+AGG | - | chr5.1:60505476-60505495 | MS.gene78539:intron | 25.0% |
| !!! | TATTGTTGTTAAGGTAGTTT+TGG | + | chr5.1:60504865-60504884 | None:intergenic | 25.0% |
| !!! | TCCAATTTTAGATCTAGAAT+AGG | + | chr5.1:60504179-60504198 | None:intergenic | 25.0% |
| !!! | TTCCTTTGTCATTTTTTTGA+AGG | - | chr5.1:60503312-60503331 | MS.gene78539:intron | 25.0% |
| AAAAGGGCTACTAAGTAAAT+TGG | + | chr5.1:60504075-60504094 | None:intergenic | 30.0% | |
| AACTTAGAATGTAGAGCTAA+AGG | - | chr5.1:60505309-60505328 | MS.gene78539:intron | 30.0% | |
| AATATGCGAAAAGTGACAAA+GGG | - | chr5.1:60503137-60503156 | MS.gene78539:intron | 30.0% | |
| ACTTAGAATGTAGAGCTAAA+GGG | - | chr5.1:60505310-60505329 | MS.gene78539:intron | 30.0% | |
| AGACTCTTATAAAACGGTAT+GGG | - | chr5.1:60504739-60504758 | MS.gene78539:intron | 30.0% | |
| AGTTATTAAATGGTTATGGG+AGG | + | chr5.1:60506208-60506227 | None:intergenic | 30.0% | |
| AGTTCATCCCAAAATGATTT+CGG | - | chr5.1:60505100-60505119 | MS.gene78539:intron | 30.0% | |
| AGTTGTGTTTGCTTTAATCA+TGG | - | chr5.1:60506393-60506412 | MS.gene78539:intron | 30.0% | |
| CCTCATTCTTTCAAACATTA+AGG | - | chr5.1:60505519-60505538 | MS.gene78539:intron | 30.0% | |
| CCTTAATGTTTGAAAGAATG+AGG | + | chr5.1:60505522-60505541 | None:intergenic | 30.0% | |
| GAAATGTCACAATAAAGCTT+TGG | - | chr5.1:60503159-60503178 | MS.gene78539:intron | 30.0% | |
| TAAAAACAAGTATCAGGAAG+TGG | + | chr5.1:60505950-60505969 | None:intergenic | 30.0% | |
| TAATTAGGAGTTGCATTTCT+TGG | - | chr5.1:60506361-60506380 | MS.gene78539:intron | 30.0% | |
| TAGACTCTTATAAAACGGTA+TGG | - | chr5.1:60504738-60504757 | MS.gene78539:intron | 30.0% | |
| TATCAGGAAGTGGTAAAATA+AGG | + | chr5.1:60505940-60505959 | None:intergenic | 30.0% | |
| TCATTCTTAGAATTTGGACT+AGG | + | chr5.1:60504308-60504327 | None:intergenic | 30.0% | |
| TTAACACATGCTTCATATTG+TGG | - | chr5.1:60506316-60506335 | MS.gene78539:intron | 30.0% | |
| TTAGAGGTTTAACAACATCA+AGG | + | chr5.1:60502635-60502654 | None:intergenic | 30.0% | |
| TTCAAGAAATTCAAGAGTCT+TGG | - | chr5.1:60506176-60506195 | MS.gene78539:intron | 30.0% | |
| ! | CGACTTCTATTGAACAATTT+TGG | - | chr5.1:60506062-60506081 | MS.gene78539:CDS | 30.0% |
| ! | CGTGATAATTGTTTTCTCAT+AGG | - | chr5.1:60503853-60503872 | MS.gene78539:intron | 30.0% |
| ! | GATTGTGAATTTGTGTGTTT+TGG | - | chr5.1:60502772-60502791 | MS.gene78539:CDS | 30.0% |
| ! | GTGATGGGATAGTTATTAAA+TGG | + | chr5.1:60506218-60506237 | None:intergenic | 30.0% |
| ! | GTTTGTTCTTTCGAGTAATT+AGG | - | chr5.1:60506346-60506365 | MS.gene78539:intron | 30.0% |
| ! | TATCTCACGTATTGTTGTTA+AGG | + | chr5.1:60504874-60504893 | None:intergenic | 30.0% |
| ! | TGAACCTTTCACTTTAAAGA+TGG | + | chr5.1:60504916-60504935 | None:intergenic | 30.0% |
| ! | TGACTAACCGAAATCATTTT+GGG | + | chr5.1:60505110-60505129 | None:intergenic | 30.0% |
| ! | TTGACTAACCGAAATCATTT+TGG | + | chr5.1:60505111-60505130 | None:intergenic | 30.0% |
| ! | TTGCTATTGAACTTTAGGTT+GGG | - | chr5.1:60503111-60503130 | MS.gene78539:intron | 30.0% |
| ! | TTTAATTCGCTTCGAGTTAT+TGG | + | chr5.1:60506465-60506484 | None:intergenic | 30.0% |
| !! | AATATGGTGTTGTTATAAGG+TGG | - | chr5.1:60503784-60503803 | MS.gene78539:intron | 30.0% |
| !! | ATTGGTTTGATCTTCTCAAA+GGG | - | chr5.1:60504682-60504701 | MS.gene78539:intron | 30.0% |
| !! | CGTTCAAAAAAAAGAGTATC+AGG | + | chr5.1:60505553-60505572 | None:intergenic | 30.0% |
| !! | TAGTTGTTTTATGTGCAGTA+GGG | - | chr5.1:60503721-60503740 | MS.gene78539:intron | 30.0% |
| !! | TGTAACTTTGCTCCATTTTT+GGG | + | chr5.1:60505618-60505637 | None:intergenic | 30.0% |
| !! | TTTGCTATTGAACTTTAGGT+TGG | - | chr5.1:60503110-60503129 | MS.gene78539:intron | 30.0% |
| !! | TTTTTCAATGAATGAGGAAG+AGG | - | chr5.1:60505482-60505501 | MS.gene78539:intron | 30.0% |
| !!! | CATTTTTTTGAAGGTTGTGT+TGG | - | chr5.1:60503321-60503340 | MS.gene78539:intron | 30.0% |
| !!! | TTGAACAATTTTGGTTACTG+AGG | - | chr5.1:60506071-60506090 | MS.gene78539:CDS | 30.0% |
| !!! | TTTGTTTTGTTTGACAGACA+GGG | - | chr5.1:60502985-60503004 | MS.gene78539:intron | 30.0% |
| AAAATCACAAGGCGGTTATT+GGG | - | chr5.1:60504469-60504488 | MS.gene78539:intron | 35.0% | |
| AAACACAACTGAAGAAGTCA+AGG | - | chr5.1:60504620-60504639 | MS.gene78539:intron | 35.0% | |
| AAATTGAGGAGCAATTAGTG+TGG | - | chr5.1:60505193-60505212 | MS.gene78539:intron | 35.0% | |
| AACACATATCATGGATCACT+AGG | - | chr5.1:60504574-60504593 | MS.gene78539:intron | 35.0% | |
| AACCAAAGTCGAACAATCAA+AGG | + | chr5.1:60506697-60506716 | None:intergenic | 35.0% | |
| AACCTTTGATTGTTCGACTT+TGG | - | chr5.1:60506692-60506711 | MS.gene78539:intron | 35.0% | |
| AAGTGTCAAGAGATGGTTAT+TGG | - | chr5.1:60505026-60505045 | MS.gene78539:intron | 35.0% | |
| AATAGGTTGCGATACCATAT+TGG | + | chr5.1:60504162-60504181 | None:intergenic | 35.0% | |
| AATTAGCTGGCCATATATGA+GGG | - | chr5.1:60504647-60504666 | MS.gene78539:intron | 35.0% | |
| AATTAGTGTGGCTTCCAATA+AGG | - | chr5.1:60505205-60505224 | MS.gene78539:intron | 35.0% | |
| ACACGTGATCATACAAATTG+AGG | - | chr5.1:60505179-60505198 | MS.gene78539:intron | 35.0% | |
| ACTCTTATAAAACGGTATGG+GGG | - | chr5.1:60504741-60504760 | MS.gene78539:intron | 35.0% | |
| ACTGTTGATGTTGTTAGTGT+TGG | - | chr5.1:60505386-60505405 | MS.gene78539:intron | 35.0% | |
| AGTGTCAAGAGATGGTTATT+GGG | - | chr5.1:60505027-60505046 | MS.gene78539:intron | 35.0% | |
| AGTGTTAACTTATGCCCTTA+GGG | - | chr5.1:60503378-60503397 | MS.gene78539:intron | 35.0% | |
| ATAGAGAAAGGAAAGGAGAA+AGG | + | chr5.1:60506242-60506261 | None:intergenic | 35.0% | |
| ATCTGTTGGAAGAATTCAAG+AGG | - | chr5.1:60504340-60504359 | MS.gene78539:intron | 35.0% | |
| ATGAAAGAACCGAAACGTTA+AGG | - | chr5.1:60505761-60505780 | MS.gene78539:intron | 35.0% | |
| ATGTCCAATACTAGATGTGA+GGG | - | chr5.1:60504213-60504232 | MS.gene78539:intron | 35.0% | |
| CAATATGCGAAAAGTGACAA+AGG | - | chr5.1:60503136-60503155 | MS.gene78539:intron | 35.0% | |
| CAGAAAACAAGCCTAAAATG+TGG | - | chr5.1:60503615-60503634 | MS.gene78539:intron | 35.0% | |
| CCAGTATCAAGAAAATCACA+AGG | - | chr5.1:60504458-60504477 | MS.gene78539:intron | 35.0% | |
| CCATATTAACTCGATCATTG+CGG | + | chr5.1:60503771-60503790 | None:intergenic | 35.0% | |
| CTAACTGTTCTGTCAAACAT+AGG | + | chr5.1:60504530-60504549 | None:intergenic | 35.0% | |
| CTTGCTAGAACTTGAATCTA+CGG | + | chr5.1:60505159-60505178 | None:intergenic | 35.0% | |
| GACTCTTATAAAACGGTATG+GGG | - | chr5.1:60504740-60504759 | MS.gene78539:intron | 35.0% | |
| GAGATTCATCCTTTGTTGAT+AGG | - | chr5.1:60504426-60504445 | MS.gene78539:intron | 35.0% | |
| GATTAGAATGGCTAAAGATG+TGG | - | chr5.1:60504966-60504985 | MS.gene78539:intron | 35.0% | |
| GGATTCTGTAAACATAGATG+TGG | - | chr5.1:60506779-60506798 | MS.gene78539:intron | 35.0% | |
| GGTACTATTGAGCAATATAG+AGG | - | chr5.1:60504813-60504832 | MS.gene78539:intron | 35.0% | |
| GTATCAAGAAAATCACAAGG+CGG | - | chr5.1:60504461-60504480 | MS.gene78539:intron | 35.0% | |
| GTGACTATGGTTTCATAGTT+TGG | - | chr5.1:60502949-60502968 | MS.gene78539:intron | 35.0% | |
| GTGGTGAATAATTCCATTCA+CGG | - | chr5.1:60505346-60505365 | MS.gene78539:intron | 35.0% | |
| TAATAGTTTGGGTCGAACTA+AGG | - | chr5.1:60505914-60505933 | MS.gene78539:intron | 35.0% | |
| TACGTGAGATATTTCATGAG+TGG | - | chr5.1:60504883-60504902 | MS.gene78539:intron | 35.0% | |
| TACTTCAACTTATCCCAAGT+CGG | + | chr5.1:60504720-60504739 | None:intergenic | 35.0% | |
| TAGAGAAAGGAAAGGAGAAA+GGG | + | chr5.1:60506241-60506260 | None:intergenic | 35.0% | |
| TAGAGTGCAGTTGATTAGAA+TGG | - | chr5.1:60504954-60504973 | MS.gene78539:intron | 35.0% | |
| TAGTGTTAACTTATGCCCTT+AGG | - | chr5.1:60503377-60503396 | MS.gene78539:intron | 35.0% | |
| TATGTCCAATACTAGATGTG+AGG | - | chr5.1:60504212-60504231 | MS.gene78539:intron | 35.0% | |
| TCCTGTAGTAATCTATAGTC+TGG | + | chr5.1:60506097-60506116 | None:intergenic | 35.0% | |
| TCTGTTGGAAGAATTCAAGA+GGG | - | chr5.1:60504341-60504360 | MS.gene78539:intron | 35.0% | |
| TGAGTCAATTAAAGACAGAG+AGG | - | chr5.1:60506731-60506750 | MS.gene78539:intron | 35.0% | |
| TGGGTGATGAAGAAATTCAA+AGG | - | chr5.1:60505001-60505020 | MS.gene78539:intron | 35.0% | |
| TTAATCATGGATGCAATTGC+AGG | - | chr5.1:60506406-60506425 | MS.gene78539:CDS | 35.0% | |
| TTATGACTCTTGTCTTGCTT+TGG | + | chr5.1:60505735-60505754 | None:intergenic | 35.0% | |
| TTCTGTTAGAACCCAAAGTT+AGG | - | chr5.1:60503580-60503599 | MS.gene78539:intron | 35.0% | |
| TTGATGAGACCTATCAACAA+AGG | + | chr5.1:60504438-60504457 | None:intergenic | 35.0% | |
| TTGCTACATGATTTCATGCA+AGG | - | chr5.1:60506758-60506777 | MS.gene78539:intron | 35.0% | |
| TTGTTTCCAAGAACAAGCAA+AGG | + | chr5.1:60506522-60506541 | None:intergenic | 35.0% | |
| ! | AAGATTAGCCAAGGCTTAAA+AGG | + | chr5.1:60504092-60504111 | None:intergenic | 35.0% |
| ! | AGATTAGCCAAGGCTTAAAA+GGG | + | chr5.1:60504091-60504110 | None:intergenic | 35.0% |
| ! | ATCAACTGCACTCTATTTTG+AGG | + | chr5.1:60504949-60504968 | None:intergenic | 35.0% |
| ! | CCTTGTGATTTTCTTGATAC+TGG | + | chr5.1:60504461-60504480 | None:intergenic | 35.0% |
| ! | CTGTAACTTTGCTCCATTTT+TGG | + | chr5.1:60505619-60505638 | None:intergenic | 35.0% |
| ! | GCTATATTTCAAGTCGATGT+GGG | + | chr5.1:60504053-60504072 | None:intergenic | 35.0% |
| ! | TCCGCTAGTTTCAAGAATTT+GGG | - | chr5.1:60505880-60505899 | MS.gene78539:intron | 35.0% |
| ! | TTCCGCTAGTTTCAAGAATT+TGG | - | chr5.1:60505879-60505898 | MS.gene78539:intron | 35.0% |
| ! | TTGGATTGGATCACAAAAGT+CGG | + | chr5.1:60503984-60504003 | None:intergenic | 35.0% |
| ! | TTTTGTGATCCAATCCAAGA+GGG | - | chr5.1:60503986-60504005 | MS.gene78539:intron | 35.0% |
| !! | AAAGGAAAAGTGTCAAGAGA+TGG | - | chr5.1:60505019-60505038 | MS.gene78539:intron | 35.0% |
| !! | ACAATAAAGCTTTGGGATCT+TGG | - | chr5.1:60503167-60503186 | MS.gene78539:intron | 35.0% |
| !! | ATTCTTAACTTGTGCCCTAA+GGG | + | chr5.1:60503395-60503414 | None:intergenic | 35.0% |
| !! | CATTGGTTTGATCTTCTCAA+AGG | - | chr5.1:60504681-60504700 | MS.gene78539:intron | 35.0% |
| !! | CTAGTTGTTTTATGTGCAGT+AGG | - | chr5.1:60503720-60503739 | MS.gene78539:intron | 35.0% |
| !! | TCAGCCATCTTTAAAGTGAA+AGG | - | chr5.1:60504909-60504928 | MS.gene78539:intron | 35.0% |
| !! | TTTCTTAACTTGTGCCTTGA+GGG | - | chr5.1:60503517-60503536 | MS.gene78539:intron | 35.0% |
| !!! | AATGTGACTGAACTAGCTTT+TGG | - | chr5.1:60504275-60504294 | MS.gene78539:intron | 35.0% |
| !!! | ATGTGACTGAACTAGCTTTT+GGG | - | chr5.1:60504276-60504295 | MS.gene78539:intron | 35.0% |
| !!! | GTTTGTTTTGTTTGACAGAC+AGG | - | chr5.1:60502984-60503003 | MS.gene78539:intron | 35.0% |
| !!! | TTAAGGTAGTTTTGGTACCT+TGG | + | chr5.1:60504857-60504876 | None:intergenic | 35.0% |
| !!! | TTGTTAGCTTTTCGACTGTT+CGG | - | chr5.1:60504792-60504811 | MS.gene78539:intron | 35.0% |
| !!! | TTGTTTTGTTTGACAGACAG+GGG | - | chr5.1:60502986-60503005 | MS.gene78539:intron | 35.0% |
| !!! | TTTTGTGTTGATTTCCTCCA+AGG | - | chr5.1:60504837-60504856 | MS.gene78539:intron | 35.0% |
| AAAGGAATCCCATTCAAGGA+AGG | + | chr5.1:60506504-60506523 | None:intergenic | 40.0% | |
| AAAGGGTTGTGATTCAAGTG+TGG | - | chr5.1:60505327-60505346 | MS.gene78539:intron | 40.0% | |
| AAGCAAAGGAATCCCATTCA+AGG | + | chr5.1:60506508-60506527 | None:intergenic | 40.0% | |
| AAGTCAAGGTGAGAATTAGC+TGG | - | chr5.1:60504634-60504653 | MS.gene78539:intron | 40.0% | |
| AAGTTCATCTACCATATCCG+CGG | - | chr5.1:60503903-60503922 | MS.gene78539:intron | 40.0% | |
| AATCCCATAAGCTACCTCAA+GGG | + | chr5.1:60504118-60504137 | None:intergenic | 40.0% | |
| AGAATTCAAGAGGGCAAACA+TGG | - | chr5.1:60504350-60504369 | MS.gene78539:intron | 40.0% | |
| AGACAAAGGCCTTAACGTTT+CGG | + | chr5.1:60505773-60505792 | None:intergenic | 40.0% | |
| AGAGAAAGGAAAGGAGAAAG+GGG | + | chr5.1:60506240-60506259 | None:intergenic | 40.0% | |
| AGATGGTTATTGGGAAACAG+TGG | - | chr5.1:60505036-60505055 | MS.gene78539:intron | 40.0% | |
| AGATGTGGAGGAGGATTTAT+TGG | - | chr5.1:60504981-60505000 | MS.gene78539:intron | 40.0% | |
| AGTCCAAAAAACTCGTCTGA+CGG | - | chr5.1:60504548-60504567 | MS.gene78539:intron | 40.0% | |
| ATGAATGAGGAAGAGGTGAT+TGG | - | chr5.1:60505489-60505508 | MS.gene78539:intron | 40.0% | |
| ATGATCCAGGACCTAACTTT+GGG | + | chr5.1:60503594-60503613 | None:intergenic | 40.0% | |
| ATTAGCTGGCCATATATGAG+GGG | - | chr5.1:60504648-60504667 | MS.gene78539:intron | 40.0% | |
| ATTCTTGAAACTAGCGGAAG+TGG | + | chr5.1:60505878-60505897 | None:intergenic | 40.0% | |
| CCGCAATGATCGAGTTAATA+TGG | - | chr5.1:60503768-60503787 | MS.gene78539:intron | 40.0% | |
| CGTCAACAAGGAAATGAGAA+GGG | - | chr5.1:60505246-60505265 | MS.gene78539:intron | 40.0% | |
| GAAAATCACAAGGCGGTTAT+TGG | - | chr5.1:60504468-60504487 | MS.gene78539:intron | 40.0% | |
| GAATTAGCTGGCCATATATG+AGG | - | chr5.1:60504646-60504665 | MS.gene78539:intron | 40.0% | |
| GATGAACTGAACCTTAGGTT+AGG | + | chr5.1:60505088-60505107 | None:intergenic | 40.0% | |
| GATGTGGAGGAGGATTTATT+GGG | - | chr5.1:60504982-60505001 | MS.gene78539:intron | 40.0% | |
| GCACAAGATGAACCCAAAAA+TGG | - | chr5.1:60505603-60505622 | MS.gene78539:intron | 40.0% | |
| GCATATGTGTCACAATACTG+AGG | - | chr5.1:60504376-60504395 | MS.gene78539:intron | 40.0% | |
| GCCAGACTATAGATTACTAC+AGG | - | chr5.1:60506093-60506112 | MS.gene78539:CDS | 40.0% | |
| GCCCAAATTCTTGAAACTAG+CGG | + | chr5.1:60505884-60505903 | None:intergenic | 40.0% | |
| GCGATACCATATTGGAGTAT+GGG | + | chr5.1:60504154-60504173 | None:intergenic | 40.0% | |
| GGTTCATCTTGTGCTCAATT+TGG | + | chr5.1:60505597-60505616 | None:intergenic | 40.0% | |
| GTCAACAAGGAAATGAGAAG+GGG | - | chr5.1:60505247-60505266 | MS.gene78539:intron | 40.0% | |
| GTTGCTTGTTCTTGTGACTA+TGG | - | chr5.1:60502936-60502955 | MS.gene78539:intron | 40.0% | |
| TAATCCCATAAGCTACCTCA+AGG | + | chr5.1:60504119-60504138 | None:intergenic | 40.0% | |
| TAGAATGGCTAAAGATGTGG+AGG | - | chr5.1:60504969-60504988 | MS.gene78539:intron | 40.0% | |
| TATAAAACGGTATGGGGGAT+GGG | - | chr5.1:60504746-60504765 | MS.gene78539:intron | 40.0% | |
| TATCTTTAGTGGCGTCAACA+AGG | - | chr5.1:60505234-60505253 | MS.gene78539:intron | 40.0% | |
| TCAACAAGGAAATGAGAAGG+GGG | - | chr5.1:60505248-60505267 | MS.gene78539:intron | 40.0% | |
| TCACAATACTGAGGATTGCA+GGG | - | chr5.1:60504385-60504404 | MS.gene78539:intron | 40.0% | |
| TGAATGAGGAAGAGGTGATT+GGG | - | chr5.1:60505490-60505509 | MS.gene78539:intron | 40.0% | |
| TGACAAAGCCTTCCTTGAAT+GGG | - | chr5.1:60506493-60506512 | MS.gene78539:intron | 40.0% | |
| TGACGGAACAACACATATCA+TGG | - | chr5.1:60504565-60504584 | MS.gene78539:intron | 40.0% | |
| TGCGATACCATATTGGAGTA+TGG | + | chr5.1:60504155-60504174 | None:intergenic | 40.0% | |
| TGTCCAATACTAGATGTGAG+GGG | - | chr5.1:60504214-60504233 | MS.gene78539:intron | 40.0% | |
| TTATAAAACGGTATGGGGGA+TGG | - | chr5.1:60504745-60504764 | MS.gene78539:intron | 40.0% | |
| TTATTGGGAAACAGTGGTTG+TGG | - | chr5.1:60505042-60505061 | MS.gene78539:intron | 40.0% | |
| TTGATCTACCAATGCTTGCT+TGG | + | chr5.1:60506568-60506587 | None:intergenic | 40.0% | |
| TTTGTGATCCAATCCAAGAG+GGG | - | chr5.1:60503987-60504006 | MS.gene78539:intron | 40.0% | |
| ! | AAATGTGGCTTGTGTACTCT+AGG | - | chr5.1:60503630-60503649 | MS.gene78539:intron | 40.0% |
| ! | CTTTTGTGATCCAATCCAAG+AGG | - | chr5.1:60503985-60504004 | MS.gene78539:intron | 40.0% |
| ! | GAGTACACAAGCCACATTTT+AGG | + | chr5.1:60503629-60503648 | None:intergenic | 40.0% |
| ! | GGCTATATTTCAAGTCGATG+TGG | + | chr5.1:60504054-60504073 | None:intergenic | 40.0% |
| ! | GTTGATGTTGTTAGTGTTGG+AGG | - | chr5.1:60505389-60505408 | MS.gene78539:intron | 40.0% |
| ! | GTTTTCTCATAGGAGAGTCT+CGG | - | chr5.1:60503863-60503882 | MS.gene78539:intron | 40.0% |
| ! | TCGACTTTGGTTGATTTCAG+AGG | - | chr5.1:60506705-60506724 | MS.gene78539:intron | 40.0% |
| ! | TCTGGGATTCTCTTCTCAAT+TGG | - | chr5.1:60502449-60502468 | MS.gene78539:CDS | 40.0% |
| ! | TTAGTAGCCCTTTTAAGCCT+TGG | - | chr5.1:60504081-60504100 | MS.gene78539:intron | 40.0% |
| ! | TTTGGGATGAACTGAACCTT+AGG | + | chr5.1:60505093-60505112 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr5.1:60503534-60503553 | None:intergenic | 40.0% |
| !! | ATAAAGCTTTGGGATCTTGG+TGG | - | chr5.1:60503170-60503189 | MS.gene78539:intron | 40.0% |
| !! | ATCCCAAGTCGGTTTTTCTT+CGG | + | chr5.1:60504709-60504728 | None:intergenic | 40.0% |
| !! | CTATATATTGGTGCCGTGAA+TGG | + | chr5.1:60505362-60505381 | None:intergenic | 40.0% |
| !! | GAACTTCCCTATTAGCCTTA+AGG | + | chr5.1:60503889-60503908 | None:intergenic | 40.0% |
| !! | GATTCTTAACTTGTGCCCTA+AGG | + | chr5.1:60503396-60503415 | None:intergenic | 40.0% |
| !! | GGTGGACTTGTGTAAGTTTT+TGG | - | chr5.1:60503802-60503821 | MS.gene78539:intron | 40.0% |
| !! | GTTTCTTAACTTGTGCCTTG+AGG | - | chr5.1:60503516-60503535 | MS.gene78539:intron | 40.0% |
| !!! | TGCTTTGGTCTTGGTGTTTT+GGG | + | chr5.1:60505720-60505739 | None:intergenic | 40.0% |
| !!! | TGTGACTGAACTAGCTTTTG+GGG | - | chr5.1:60504277-60504296 | MS.gene78539:intron | 40.0% |
| !!! | TGTTTTGTTTGACAGACAGG+GGG | - | chr5.1:60502987-60503006 | MS.gene78539:intron | 40.0% |
| !!! | TTGCTTTGGTCTTGGTGTTT+TGG | + | chr5.1:60505721-60505740 | None:intergenic | 40.0% |
| AACGGAGGTTTCGAACAATG+TGG | - | chr5.1:60503195-60503214 | MS.gene78539:intron | 45.0% | |
| AATGGCTAAAGATGTGGAGG+AGG | - | chr5.1:60504972-60504991 | MS.gene78539:intron | 45.0% | |
| ACAAAAGTCGGACCAGCTAT+AGG | + | chr5.1:60503972-60503991 | None:intergenic | 45.0% | |
| ACATAGATGTGGTCATCGAC+TGG | - | chr5.1:60506790-60506809 | MS.gene78539:intron | 45.0% | |
| ACCATATTGGAGTATGGGCT+AGG | + | chr5.1:60504149-60504168 | None:intergenic | 45.0% | |
| ACGGAGGTTTCGAACAATGT+GGG | - | chr5.1:60503196-60503215 | MS.gene78539:intron | 45.0% | |
| AGAACAAAACACCCAGCCAA+AGG | - | chr5.1:60505645-60505664 | MS.gene78539:intron | 45.0% | |
| AGCTCTTTCCAAGCAAGCAT+TGG | - | chr5.1:60506557-60506576 | MS.gene78539:intron | 45.0% | |
| AGTTCATCTACCATATCCGC+GGG | - | chr5.1:60503904-60503923 | MS.gene78539:intron | 45.0% | |
| ATCCCATAAGCTACCTCAAG+GGG | + | chr5.1:60504117-60504136 | None:intergenic | 45.0% | |
| CAAAAGTCGGACCAGCTATA+GGG | + | chr5.1:60503971-60503990 | None:intergenic | 45.0% | |
| CAAAGAAGCCATAGTGTCAC+AGG | + | chr5.1:60505806-60505825 | None:intergenic | 45.0% | |
| CATGATCCAGGACCTAACTT+TGG | + | chr5.1:60503595-60503614 | None:intergenic | 45.0% | |
| CCAGTTTCTATCAGCATCCA+CGG | + | chr5.1:60506008-60506027 | None:intergenic | 45.0% | |
| CTCTTGTCTTGCTTTGGTCT+TGG | + | chr5.1:60505729-60505748 | None:intergenic | 45.0% | |
| CTGACAAAGCCTTCCTTGAA+TGG | - | chr5.1:60506492-60506511 | MS.gene78539:intron | 45.0% | |
| CTGTGACACTATGGCTTCTT+TGG | - | chr5.1:60505804-60505823 | MS.gene78539:intron | 45.0% | |
| CTTGTAGGTCTTCAGAATGC+TGG | - | chr5.1:60502829-60502848 | MS.gene78539:CDS | 45.0% | |
| GCGTCAACAAGGAAATGAGA+AGG | - | chr5.1:60505245-60505264 | MS.gene78539:intron | 45.0% | |
| GGGATTCCTTTGCTTGTTCT+TGG | - | chr5.1:60506513-60506532 | MS.gene78539:intron | 45.0% | |
| GTCACAATACTGAGGATTGC+AGG | - | chr5.1:60504384-60504403 | MS.gene78539:intron | 45.0% | |
| GTCCAATACTAGATGTGAGG+GGG | - | chr5.1:60504215-60504234 | MS.gene78539:intron | 45.0% | |
| GTTTCAAGAATTTGGGCACC+CGG | - | chr5.1:60505887-60505906 | MS.gene78539:intron | 45.0% | |
| TAGAACCCAAAGTTAGGTCC+TGG | - | chr5.1:60503586-60503605 | MS.gene78539:intron | 45.0% | |
| TAGGTTAGGCCGAAAACAAC+AGG | + | chr5.1:60505074-60505093 | None:intergenic | 45.0% | |
| TCCAATACTAGATGTGAGGG+GGG | - | chr5.1:60504216-60504235 | MS.gene78539:intron | 45.0% | |
| TCTCGGCCTTAAGGCTAATA+GGG | - | chr5.1:60503880-60503899 | MS.gene78539:intron | 45.0% | |
| TTTCAAGAATTTGGGCACCC+GGG | - | chr5.1:60505888-60505907 | MS.gene78539:intron | 45.0% | |
| ! | ACAAAGAGTACATCAACCCG+CGG | + | chr5.1:60503923-60503942 | None:intergenic | 45.0% |
| ! | ATCAAGATGTAGATTGGCCG+TGG | - | chr5.1:60505988-60506007 | MS.gene78539:intron | 45.0% |
| ! | CATTCAAGGAAGGCTTTGTC+AGG | + | chr5.1:60506494-60506513 | None:intergenic | 45.0% |
| ! | CCATATTGGAGTATGGGCTA+GGG | + | chr5.1:60504148-60504167 | None:intergenic | 45.0% |
| ! | GACAAGTAGGGTTGATCTGT+TGG | - | chr5.1:60504326-60504345 | MS.gene78539:intron | 45.0% |
| ! | GACCGAAGAAAAACCGACTT+GGG | - | chr5.1:60504704-60504723 | MS.gene78539:intron | 45.0% |
| ! | TTTGGGATCTTGGTGGTCAA+CGG | - | chr5.1:60503177-60503196 | MS.gene78539:intron | 45.0% |
| !! | AGGAAAGTGGGTTTTACCTG+CGG | + | chr5.1:60502477-60502496 | None:intergenic | 45.0% |
| !! | GCTTGTTTTCTGCATGATCC+AGG | + | chr5.1:60503607-60503626 | None:intergenic | 45.0% |
| !! | GTTGTTTTCGGCCTAACCTA+AGG | - | chr5.1:60505074-60505093 | MS.gene78539:intron | 45.0% |
| !!! | AGGTAGTTTTGGTACCTTGG+AGG | + | chr5.1:60504854-60504873 | None:intergenic | 45.0% |
| !!! | GTCTTGGTGTTTTGGGATCT+TGG | + | chr5.1:60505713-60505732 | None:intergenic | 45.0% |
| !!! | GTTCCGTCAGACGAGTTTTT+TGG | + | chr5.1:60504554-60504573 | None:intergenic | 45.0% |
| AATACTAGATGTGAGGGGGG+TGG | - | chr5.1:60504219-60504238 | MS.gene78539:intron | 50.0% | |
| AATTCACAACCCTCCCCTCT+TGG | + | chr5.1:60504003-60504022 | None:intergenic | 50.0% | |
| ACCCCCCTCACATCTAGTAT+TGG | + | chr5.1:60504220-60504239 | None:intergenic | 50.0% | |
| AGAAGCCATAGTGTCACAGG+CGG | + | chr5.1:60505803-60505822 | None:intergenic | 50.0% | |
| AGGAAAGGAGAAAGGGGTGA+TGG | + | chr5.1:60506234-60506253 | None:intergenic | 50.0% | |
| AGTACATCAACCCGCGGATA+TGG | + | chr5.1:60503917-60503936 | None:intergenic | 50.0% | |
| ATAGGAGAGTCTCGGCCTTA+AGG | - | chr5.1:60503871-60503890 | MS.gene78539:intron | 50.0% | |
| CACCCCTTGAGGTAGCTTAT+GGG | - | chr5.1:60504112-60504131 | MS.gene78539:intron | 50.0% | |
| CACCCGGGTCGTAATAGTTT+GGG | - | chr5.1:60505903-60505922 | MS.gene78539:intron | 50.0% | |
| CCCTAGCCCATACTCCAATA+TGG | - | chr5.1:60504145-60504164 | MS.gene78539:intron | 50.0% | |
| CCGTGGATGCTGATAGAAAC+TGG | - | chr5.1:60506005-60506024 | MS.gene78539:intron | 50.0% | |
| CGACCCAAACTATTACGACC+CGG | + | chr5.1:60505909-60505928 | None:intergenic | 50.0% | |
| CTAGCGGAAGTGGTCAAAGA+AGG | + | chr5.1:60505868-60505887 | None:intergenic | 50.0% | |
| GACCCAAACTATTACGACCC+GGG | + | chr5.1:60505908-60505927 | None:intergenic | 50.0% | |
| GAGATGGAGCTGTCTCTTGT+AGG | - | chr5.1:60502814-60502833 | MS.gene78539:CDS | 50.0% | |
| GCTGTTCCTCCCCTCATATA+TGG | + | chr5.1:60504660-60504679 | None:intergenic | 50.0% | |
| GGAAAGGAGAAAGGGGTGAT+GGG | + | chr5.1:60506233-60506252 | None:intergenic | 50.0% | |
| GGACCGAAGAAAAACCGACT+TGG | - | chr5.1:60504703-60504722 | MS.gene78539:intron | 50.0% | |
| GTCTCGGCCTTAAGGCTAAT+AGG | - | chr5.1:60503879-60503898 | MS.gene78539:intron | 50.0% | |
| TCACCCCTTGAGGTAGCTTA+TGG | - | chr5.1:60504111-60504130 | MS.gene78539:intron | 50.0% | |
| TGATCCAATCCAAGAGGGGA+GGG | - | chr5.1:60503991-60504010 | MS.gene78539:intron | 50.0% | |
| TGGCTAATCTTCACCCCTTG+AGG | - | chr5.1:60504101-60504120 | MS.gene78539:intron | 50.0% | |
| TTGGGAAACAGTGGTTGTGG+AGG | - | chr5.1:60505045-60505064 | MS.gene78539:intron | 50.0% | |
| ! | CAAGGGGTGAAGATTAGCCA+AGG | + | chr5.1:60504101-60504120 | None:intergenic | 50.0% |
| !! | GCGGGTTGATGTACTCTTTG+TGG | - | chr5.1:60503922-60503941 | MS.gene78539:intron | 50.0% |
| !!! | TGGAGGCAGCCTGTTGTTTT+CGG | - | chr5.1:60505062-60505081 | MS.gene78539:intron | 50.0% |
| AAGAAGGCGGTGTAGGTGGT+AGG | + | chr5.1:60505852-60505871 | None:intergenic | 55.0% | |
| ACAACCCTCCCCTCTTGGAT+TGG | + | chr5.1:60503998-60504017 | None:intergenic | 55.0% | |
| ACAGACAGGGGGATACAGTG+AGG | - | chr5.1:60502998-60503017 | MS.gene78539:intron | 55.0% | |
| AGCTGGCCATATATGAGGGG+AGG | - | chr5.1:60504651-60504670 | MS.gene78539:intron | 55.0% | |
| GCACCCGGGTCGTAATAGTT+TGG | - | chr5.1:60505902-60505921 | MS.gene78539:intron | 55.0% | |
| GCGGAAGTGGTCAAAGAAGG+CGG | + | chr5.1:60505865-60505884 | None:intergenic | 55.0% | |
| GTCAAAGAAGGCGGTGTAGG+TGG | + | chr5.1:60505856-60505875 | None:intergenic | 55.0% | |
| GTGATCCAATCCAAGAGGGG+AGG | - | chr5.1:60503990-60504009 | MS.gene78539:intron | 55.0% | |
| GTGGTCAAAGAAGGCGGTGT+AGG | + | chr5.1:60505859-60505878 | None:intergenic | 55.0% | |
| TGACTCGTGACGTGAGCCTT+TGG | + | chr5.1:60505664-60505683 | None:intergenic | 55.0% | |
| TGAGGGGAGGAACAGCTCAT+TGG | - | chr5.1:60504664-60504683 | MS.gene78539:intron | 55.0% | |
| ! | CTCTTCTCAATTGGCTCCGC+AGG | - | chr5.1:60502458-60502477 | MS.gene78539:CDS | 55.0% |
| AGCCATAGTGTCACAGGCGG+AGG | + | chr5.1:60505800-60505819 | None:intergenic | 60.0% | |
| CAGGCGGAGGTCAGAGACAA+AGG | + | chr5.1:60505787-60505806 | None:intergenic | 60.0% | |
| CGTGACGTGAGCCTTTGGCT+GGG | + | chr5.1:60505659-60505678 | None:intergenic | 60.0% | |
| GACCTCCGCCTGTGACACTA+TGG | - | chr5.1:60505795-60505814 | MS.gene78539:intron | 60.0% | |
| TCGTGACGTGAGCCTTTGGC+TGG | + | chr5.1:60505660-60505679 | None:intergenic | 60.0% | |
| ! | GGGATCTTGGTGGTCAACGG+AGG | - | chr5.1:60503180-60503199 | MS.gene78539:intron | 60.0% |
| !! | ATGTGGGAGCGCTACTGTCG+CGG | - | chr5.1:60503212-60503231 | MS.gene78539:intron | 60.0% |
| !! | GTGTAGGTGGTAGGCGTCGA+AGG | + | chr5.1:60505843-60505862 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 60502442 | 60506842 | 60502442 | ID=MS.gene78539 |
| chr5.1 | mRNA | 60502442 | 60506842 | 60502442 | ID=MS.gene78539.t1;Parent=MS.gene78539 |
| chr5.1 | exon | 60506805 | 60506842 | 60506805 | ID=MS.gene78539.t1.exon1;Parent=MS.gene78539.t1 |
| chr5.1 | CDS | 60506805 | 60506842 | 60506805 | ID=cds.MS.gene78539.t1;Parent=MS.gene78539.t1 |
| chr5.1 | exon | 60506405 | 60506486 | 60506405 | ID=MS.gene78539.t1.exon2;Parent=MS.gene78539.t1 |
| chr5.1 | CDS | 60506405 | 60506486 | 60506405 | ID=cds.MS.gene78539.t1;Parent=MS.gene78539.t1 |
| chr5.1 | exon | 60506250 | 60506282 | 60506250 | ID=MS.gene78539.t1.exon3;Parent=MS.gene78539.t1 |
| chr5.1 | CDS | 60506250 | 60506282 | 60506250 | ID=cds.MS.gene78539.t1;Parent=MS.gene78539.t1 |
| chr5.1 | exon | 60506035 | 60506156 | 60506035 | ID=MS.gene78539.t1.exon4;Parent=MS.gene78539.t1 |
| chr5.1 | CDS | 60506035 | 60506156 | 60506035 | ID=cds.MS.gene78539.t1;Parent=MS.gene78539.t1 |
| chr5.1 | exon | 60502695 | 60502856 | 60502695 | ID=MS.gene78539.t1.exon5;Parent=MS.gene78539.t1 |
| chr5.1 | CDS | 60502695 | 60502856 | 60502695 | ID=cds.MS.gene78539.t1;Parent=MS.gene78539.t1 |
| chr5.1 | exon | 60502442 | 60502559 | 60502442 | ID=MS.gene78539.t1.exon6;Parent=MS.gene78539.t1 |
| chr5.1 | CDS | 60502442 | 60502559 | 60502442 | ID=cds.MS.gene78539.t1;Parent=MS.gene78539.t1 |
| Gene Sequence |
| Protein sequence |
