Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035679.t1 | XP_003610185.1 | 99.4 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 3.20E-91 | 344.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035679.t1 | Q96361 | 92.4 | 171 | 13 | 0 | 1 | 171 | 1 | 171 | 8.7e-90 | 330.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035679.t1 | G7JD44 | 99.4 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 2.3e-91 | 344.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035679.t1 | MTR_4g128910 | 98.266 | 173 | 3 | 0 | 1 | 173 | 1 | 173 | 1.67e-125 | 350 |
| MS.gene035679.t1 | MTR_6g005820 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.05e-80 | 237 |
| MS.gene035679.t1 | MTR_5g034130 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.38e-80 | 237 |
| MS.gene035679.t1 | MTR_5g034125 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.38e-80 | 237 |
| MS.gene035679.t1 | MTR_7g109960 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 1.44e-80 | 236 |
| MS.gene035679.t1 | MTR_1g086480 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 2.11e-80 | 236 |
| MS.gene035679.t1 | MTR_5g016540 | 56.647 | 173 | 75 | 0 | 1 | 173 | 1 | 173 | 1.08e-73 | 219 |
| MS.gene035679.t1 | MTR_5g007810 | 56.647 | 173 | 75 | 0 | 1 | 173 | 1 | 173 | 2.14e-70 | 211 |
| MS.gene035679.t1 | MTR_4g077640 | 54.913 | 173 | 78 | 0 | 1 | 173 | 1 | 173 | 1.34e-66 | 202 |
| MS.gene035679.t1 | MTR_5g007820 | 52.601 | 173 | 80 | 1 | 1 | 171 | 1 | 173 | 1.62e-64 | 196 |
| MS.gene035679.t1 | MTR_1g076550 | 49.133 | 173 | 88 | 0 | 1 | 173 | 1 | 173 | 1.34e-59 | 183 |
| MS.gene035679.t1 | MTR_5g007840 | 41.176 | 204 | 75 | 2 | 1 | 171 | 1 | 192 | 3.62e-47 | 153 |
| MS.gene035679.t1 | MTR_8g077540 | 49.032 | 155 | 76 | 3 | 19 | 171 | 18 | 171 | 1.13e-45 | 148 |
| MS.gene035679.t1 | MTR_8g077540 | 49.032 | 155 | 76 | 3 | 19 | 171 | 44 | 197 | 2.15e-45 | 148 |
| MS.gene035679.t1 | MTR_5g015370 | 38.037 | 163 | 98 | 2 | 1 | 160 | 1 | 163 | 1.86e-33 | 117 |
| MS.gene035679.t1 | MTR_2g022200 | 34.637 | 179 | 106 | 2 | 4 | 173 | 4 | 180 | 7.78e-33 | 116 |
| MS.gene035679.t1 | MTR_5g078090 | 35.948 | 153 | 97 | 1 | 9 | 160 | 11 | 163 | 6.61e-29 | 105 |
| MS.gene035679.t1 | MTR_4g026950 | 35.915 | 142 | 90 | 1 | 20 | 160 | 3 | 144 | 1.40e-27 | 101 |
| MS.gene035679.t1 | MTR_8g077540 | 49.485 | 97 | 47 | 2 | 19 | 114 | 18 | 113 | 2.06e-27 | 100 |
| MS.gene035679.t1 | MTR_7g112090 | 32.749 | 171 | 103 | 1 | 15 | 173 | 18 | 188 | 1.07e-25 | 97.8 |
| MS.gene035679.t1 | MTR_2g034640 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 1.11e-25 | 97.8 |
| MS.gene035679.t1 | MTR_4g121860 | 38.931 | 131 | 80 | 0 | 15 | 145 | 18 | 148 | 4.60e-24 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035679.t1 | AT2G24765 | 91.813 | 171 | 14 | 0 | 1 | 171 | 1 | 171 | 4.35e-119 | 334 |
| MS.gene035679.t1 | AT2G24765 | 92.969 | 128 | 9 | 0 | 1 | 128 | 1 | 128 | 1.41e-87 | 253 |
| MS.gene035679.t1 | AT5G14670 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 3.83e-80 | 236 |
| MS.gene035679.t1 | AT5G14670 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 3.83e-80 | 236 |
| MS.gene035679.t1 | AT5G14670 | 62.428 | 173 | 65 | 0 | 1 | 173 | 1 | 173 | 6.35e-80 | 235 |
| MS.gene035679.t1 | AT1G10630 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 8.23e-80 | 235 |
| MS.gene035679.t1 | AT1G10630 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 8.23e-80 | 235 |
| MS.gene035679.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT1G23490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT1G70490 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 1.44e-79 | 234 |
| MS.gene035679.t1 | AT3G62290 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.13e-79 | 234 |
| MS.gene035679.t1 | AT3G62290 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.13e-79 | 234 |
| MS.gene035679.t1 | AT3G62290 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.13e-79 | 234 |
| MS.gene035679.t1 | AT2G47170 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.49e-79 | 233 |
| MS.gene035679.t1 | AT2G47170 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.49e-79 | 233 |
| MS.gene035679.t1 | AT2G47170 | 61.850 | 173 | 66 | 0 | 1 | 173 | 1 | 173 | 2.49e-79 | 233 |
| MS.gene035679.t1 | AT5G17060 | 54.335 | 173 | 79 | 0 | 1 | 173 | 1 | 173 | 1.03e-68 | 207 |
| MS.gene035679.t1 | AT5G17060 | 54.335 | 173 | 79 | 0 | 1 | 173 | 1 | 173 | 1.03e-68 | 207 |
| MS.gene035679.t1 | AT3G03120 | 54.913 | 173 | 78 | 0 | 1 | 173 | 1 | 173 | 6.59e-68 | 205 |
| MS.gene035679.t1 | AT2G15310 | 56.140 | 171 | 75 | 0 | 1 | 171 | 1 | 171 | 3.35e-65 | 199 |
| MS.gene035679.t1 | AT3G22950 | 49.133 | 173 | 88 | 0 | 1 | 173 | 1 | 173 | 8.10e-60 | 184 |
| MS.gene035679.t1 | AT3G22950 | 49.133 | 173 | 88 | 0 | 1 | 173 | 1 | 173 | 8.10e-60 | 184 |
| MS.gene035679.t1 | AT3G03120 | 57.692 | 130 | 55 | 0 | 1 | 130 | 1 | 130 | 1.18e-53 | 167 |
| MS.gene035679.t1 | AT2G18390 | 48.387 | 155 | 77 | 3 | 19 | 171 | 18 | 171 | 7.31e-45 | 146 |
| MS.gene035679.t1 | AT1G02430 | 34.595 | 185 | 107 | 5 | 1 | 173 | 1 | 183 | 1.04e-36 | 125 |
| MS.gene035679.t1 | AT1G02440 | 31.351 | 185 | 113 | 5 | 1 | 173 | 1 | 183 | 8.58e-34 | 118 |
| MS.gene035679.t1 | AT3G49870 | 36.810 | 163 | 100 | 2 | 1 | 160 | 1 | 163 | 5.50e-33 | 116 |
| MS.gene035679.t1 | AT1G02430 | 34.161 | 161 | 96 | 4 | 1 | 153 | 1 | 159 | 2.19e-32 | 114 |
| MS.gene035679.t1 | AT5G67560 | 36.424 | 151 | 95 | 1 | 11 | 160 | 13 | 163 | 1.16e-31 | 112 |
| MS.gene035679.t1 | AT5G52210 | 32.768 | 177 | 112 | 1 | 4 | 173 | 4 | 180 | 7.59e-31 | 111 |
| MS.gene035679.t1 | AT5G52210 | 32.768 | 177 | 112 | 1 | 4 | 173 | 4 | 180 | 7.59e-31 | 111 |
| MS.gene035679.t1 | AT3G49870 | 37.857 | 140 | 86 | 1 | 22 | 160 | 5 | 144 | 1.31e-30 | 109 |
| MS.gene035679.t1 | AT3G49860 | 38.406 | 138 | 84 | 1 | 16 | 152 | 10 | 147 | 2.87e-30 | 108 |
| MS.gene035679.t1 | AT5G37680 | 34.641 | 153 | 99 | 1 | 9 | 160 | 11 | 163 | 4.50e-28 | 103 |
| MS.gene035679.t1 | AT4G02080 | 33.333 | 171 | 102 | 1 | 15 | 173 | 18 | 188 | 8.64e-26 | 97.8 |
| MS.gene035679.t1 | AT3G62560 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 1.12e-25 | 97.8 |
| MS.gene035679.t1 | AT1G56330 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 3.09e-25 | 96.7 |
| MS.gene035679.t1 | AT1G09180 | 41.176 | 119 | 70 | 0 | 15 | 133 | 18 | 136 | 1.19e-24 | 95.1 |
| MS.gene035679.t1 | AT5G37680 | 36.522 | 115 | 73 | 0 | 46 | 160 | 2 | 116 | 3.19e-23 | 89.7 |
| MS.gene035679.t1 | AT1G02440 | 27.922 | 154 | 75 | 4 | 1 | 153 | 1 | 119 | 1.13e-20 | 82.8 |
Find 28 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATTATTGCTTGAGTATT+TGG | 0.102072 | 8.1:+4203650 | None:intergenic |
| AAATTTCAAGTTTGGGATTT+AGG | 0.151990 | 8.1:-4206155 | MS.gene035679:intron |
| TTTAAAACTTCTGCTATAAA+AGG | 0.186926 | 8.1:-4202258 | MS.gene035679:CDS |
| ACAACATTAAATTTCAAGTT+TGG | 0.228412 | 8.1:-4206163 | MS.gene035679:CDS |
| TTTCAGGAAGAAGAACTAAA+AGG | 0.299609 | 8.1:-4202606 | MS.gene035679:intron |
| GGAGGAGTTCCATGCAATTC+TGG | 0.326352 | 8.1:-4203585 | MS.gene035679:CDS |
| CAACATTAAATTTCAAGTTT+GGG | 0.328587 | 8.1:-4206162 | MS.gene035679:CDS |
| GGAAAGTAACACCTCCAATA+TGG | 0.374802 | 8.1:+4203671 | None:intergenic |
| TTGATTCAAGTGACACTGAT+AGG | 0.424944 | 8.1:-4203622 | MS.gene035679:CDS |
| CTGATAGGCTTGTGATAGCT+AGG | 0.436345 | 8.1:-4203607 | MS.gene035679:CDS |
| CAGGTGGGCAAACAAGTATC+AGG | 0.480395 | 8.1:-4204756 | MS.gene035679:intron |
| ATGAAGAAGCATACATAGAA+TGG | 0.499743 | 8.1:+4206514 | None:intergenic |
| GAAGCTCGAATTCTCGTTCT+CGG | 0.503966 | 8.1:-4206560 | MS.gene035679:CDS |
| GATTATTTGATACAGCGATC+GGG | 0.525019 | 8.1:-4206211 | MS.gene035679:intron |
| TTGTCCATAGGCCATATTGG+AGG | 0.528609 | 8.1:-4203682 | MS.gene035679:intron |
| CCGTCACTGCAGCATCATCA+AGG | 0.530798 | 8.1:+4202325 | None:intergenic |
| CCTTGATGATGCTGCAGTGA+CGG | 0.531460 | 8.1:-4202325 | MS.gene035679:CDS |
| TCCATTATGCAGGATCTACC+AGG | 0.537332 | 8.1:-4202351 | MS.gene035679:intron |
| GCAGCATCATCAAGGGCGCC+TGG | 0.541314 | 8.1:+4202333 | None:intergenic |
| ACTTCTGCTATAAAAGGCGA+AGG | 0.577101 | 8.1:-4202252 | MS.gene035679:CDS |
| CGTCACTGCAGCATCATCAA+GGG | 0.584247 | 8.1:+4202326 | None:intergenic |
| CACATACCTCCAGAATTGCA+TGG | 0.589186 | 8.1:+4203576 | None:intergenic |
| GATCGAGTACGAACTTGGAA+TGG | 0.605389 | 8.1:+4206397 | None:intergenic |
| GTTCTCGGTCTTGACAATGC+CGG | 0.612027 | 8.1:-4206545 | MS.gene035679:CDS |
| TGATAGGCTTGTGATAGCTA+GGG | 0.616455 | 8.1:-4203606 | MS.gene035679:CDS |
| TAGGCTTGTGATAGCTAGGG+AGG | 0.666014 | 8.1:-4203603 | MS.gene035679:CDS |
| AAGAAGCATACATAGAATGG+TGG | 0.667666 | 8.1:+4206517 | None:intergenic |
| GGAGTTCCATGCAATTCTGG+AGG | 0.674172 | 8.1:-4203582 | MS.gene035679:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAATTTATTTATAATGT+TGG | - | chr8.1:4204828-4204847 | MS.gene035679:intron | 10.0% |
| !!! | TGTATTTTATGTATATTTTA+TGG | - | chr8.1:4202638-4202657 | MS.gene035679:intron | 10.0% |
| !! | AAAACTAATAAAACTTAACT+TGG | + | chr8.1:4203212-4203231 | None:intergenic | 15.0% |
| !! | AAATTTACTACATATATATC+AGG | + | chr8.1:4204995-4205014 | None:intergenic | 15.0% |
| !! | AAGAGTTAAGATTAAAAAAA+AGG | + | chr8.1:4204206-4204225 | None:intergenic | 15.0% |
| !! | AATTATTTATCAAACAAAAC+AGG | + | chr8.1:4205580-4205599 | None:intergenic | 15.0% |
| !! | AATTTACTACATATATATCA+GGG | + | chr8.1:4204994-4205013 | None:intergenic | 15.0% |
| !! | ATAATAAAAGTTATTGTCAA+AGG | + | chr8.1:4203762-4203781 | None:intergenic | 15.0% |
| !! | ATTAGATCATAATATCAAAT+AGG | + | chr8.1:4204151-4204170 | None:intergenic | 15.0% |
| !! | ATTTACTTACAAAAAATTAC+TGG | + | chr8.1:4203019-4203038 | None:intergenic | 15.0% |
| !! | CAATAAAATTACAATTACTA+AGG | + | chr8.1:4205829-4205848 | None:intergenic | 15.0% |
| !! | TATAATTACCAGTAAAAATA+AGG | + | chr8.1:4205618-4205637 | None:intergenic | 15.0% |
| !! | TTAAAATAAAATCTAGTCAA+AGG | + | chr8.1:4206005-4206024 | None:intergenic | 15.0% |
| !! | TTAGATCATAATATCAAATA+GGG | + | chr8.1:4204150-4204169 | None:intergenic | 15.0% |
| !!! | ACAACTTTGAAATAAAATAA+AGG | + | chr8.1:4202895-4202914 | None:intergenic | 15.0% |
| !!! | AGGTAATAAACTATATTTTA+AGG | + | chr8.1:4203844-4203863 | None:intergenic | 15.0% |
| !!! | CAACTTTGAAATAAAATAAA+GGG | + | chr8.1:4202894-4202913 | None:intergenic | 15.0% |
| !!! | TAGTAATTGTAATTTTATTG+TGG | - | chr8.1:4205829-4205848 | MS.gene035679:intron | 15.0% |
| !!! | TTTTTTCCTAATAAAATACA+AGG | + | chr8.1:4204513-4204532 | None:intergenic | 15.0% |
| !! | AAATAATCAAAGACAGTAAA+AGG | + | chr8.1:4205024-4205043 | None:intergenic | 20.0% |
| !! | AATGTGGGAAAAAAATTATA+TGG | - | chr8.1:4204888-4204907 | MS.gene035679:intron | 20.0% |
| !! | ATGCATTAAAGAAAATAAAC+AGG | - | chr8.1:4203811-4203830 | MS.gene035679:intron | 20.0% |
| !! | ATGTAAAAAACTAGCAATAA+AGG | - | chr8.1:4202938-4202957 | MS.gene035679:intron | 20.0% |
| !! | ATTATGATCTAATTCAATTG+CGG | - | chr8.1:4204158-4204177 | MS.gene035679:intron | 20.0% |
| !! | CAAAATTTGTAAAGATAACA+TGG | + | chr8.1:4202742-4202761 | None:intergenic | 20.0% |
| !! | CTTGAGGAAAAAAAAAAAAT+GGG | + | chr8.1:4203343-4203362 | None:intergenic | 20.0% |
| !! | GAAACGGATAAAAATTAATT+AGG | + | chr8.1:4205981-4206000 | None:intergenic | 20.0% |
| !! | TAATTCAAAATATTGAGTAC+AGG | + | chr8.1:4203454-4203473 | None:intergenic | 20.0% |
| !! | TAGATCATAATATCAAATAG+GGG | + | chr8.1:4204149-4204168 | None:intergenic | 20.0% |
| !! | TTGAAACTTCTCATTATATT+TGG | + | chr8.1:4204466-4204485 | None:intergenic | 20.0% |
| !!! | AACTTTTATTTTATACAGGT+GGG | - | chr8.1:4203957-4203976 | MS.gene035679:intron | 20.0% |
| !!! | AAGAAACCTTGTATTTTATT+AGG | - | chr8.1:4204504-4204523 | MS.gene035679:intron | 20.0% |
| !!! | AAGTTTTAAAAATAGACCAT+TGG | + | chr8.1:4206460-4206479 | None:intergenic | 20.0% |
| !!! | AATTGTAATTTTATTGTGGA+GGG | - | chr8.1:4205833-4205852 | MS.gene035679:intron | 20.0% |
| !!! | ACAACATTAAATTTCAAGTT+TGG | - | chr8.1:4202565-4202584 | MS.gene035679:intron | 20.0% |
| !!! | ATCCAACTTTTATTTTATAC+AGG | - | chr8.1:4203953-4203972 | MS.gene035679:intron | 20.0% |
| !!! | ATTACTAAGGATTCATTTTT+TGG | + | chr8.1:4205816-4205835 | None:intergenic | 20.0% |
| !!! | CAACATTAAATTTCAAGTTT+GGG | - | chr8.1:4202566-4202585 | MS.gene035679:intron | 20.0% |
| !!! | GTTTTATTCTTCTAGATTTT+AGG | + | chr8.1:4204386-4204405 | None:intergenic | 20.0% |
| !!! | TAAAATTGAATGCTATTTCA+AGG | - | chr8.1:4206530-4206549 | MS.gene035679:CDS | 20.0% |
| !!! | TAAAGGATTTGTTTACAAAA+TGG | - | chr8.1:4205673-4205692 | MS.gene035679:intron | 20.0% |
| !!! | TAAGTTTTATTAGTTTTTCC+CGG | - | chr8.1:4203215-4203234 | MS.gene035679:intron | 20.0% |
| !!! | TAATTGTAATTTTATTGTGG+AGG | - | chr8.1:4205832-4205851 | MS.gene035679:intron | 20.0% |
| !!! | TCTTTCATTTTTTTTCAGAT+CGG | - | chr8.1:4202283-4202302 | MS.gene035679:CDS | 20.0% |
| !!! | TTGATTATTTTTTTGTCCAT+AGG | - | chr8.1:4205034-4205053 | MS.gene035679:intron | 20.0% |
| !!! | TTTAAAACTTCTGCTATAAA+AGG | - | chr8.1:4206470-4206489 | MS.gene035679:intron | 20.0% |
| !!! | TTTGTATTCCTTATTTTTAC+TGG | - | chr8.1:4205607-4205626 | MS.gene035679:intron | 20.0% |
| ! | AAAATGAATAAGATTGCGTA+AGG | + | chr8.1:4204743-4204762 | None:intergenic | 25.0% |
| ! | AAGAAATGAAATTGACAAGT+AGG | + | chr8.1:4205900-4205919 | None:intergenic | 25.0% |
| ! | AAGTGTATTTACTGTTCTAA+AGG | - | chr8.1:4205656-4205675 | MS.gene035679:intron | 25.0% |
| ! | AGAATTTGATTCATAAGTGT+TGG | - | chr8.1:4206179-4206198 | MS.gene035679:CDS | 25.0% |
| ! | AGCTTATATTGCAATTTACA+AGG | - | chr8.1:4205267-4205286 | MS.gene035679:intron | 25.0% |
| ! | ATTTGAAAACCATACTAGTT+TGG | + | chr8.1:4202852-4202871 | None:intergenic | 25.0% |
| ! | CACCTGTATAAAATAAAAGT+TGG | + | chr8.1:4203958-4203977 | None:intergenic | 25.0% |
| ! | CTAAAAGAGAAATTCATCTT+TGG | + | chr8.1:4204811-4204830 | None:intergenic | 25.0% |
| ! | GCTTATATTGCAATTTACAA+GGG | - | chr8.1:4205268-4205287 | MS.gene035679:intron | 25.0% |
| ! | GCTTGAGGAAAAAAAAAAAA+TGG | + | chr8.1:4203344-4203363 | None:intergenic | 25.0% |
| ! | GGATAGAAAAAAAATACTAC+TGG | + | chr8.1:4204128-4204147 | None:intergenic | 25.0% |
| ! | TAGATTATTGCTTGAGTATT+TGG | + | chr8.1:4205081-4205100 | None:intergenic | 25.0% |
| ! | TGATTAAAAGAACAAATCAC+AGG | - | chr8.1:4204919-4204938 | MS.gene035679:intron | 25.0% |
| ! | TTTACAGCTAAACAGAAATA+TGG | + | chr8.1:4204229-4204248 | None:intergenic | 25.0% |
| !! | AATTCTCTCTGAAAATGATA+AGG | - | chr8.1:4204603-4204622 | MS.gene035679:intron | 25.0% |
| !! | AGATTGTTTTCATCTGTTTT+CGG | - | chr8.1:4202138-4202157 | MS.gene035679:intron | 25.0% |
| !! | ATTCTCTCTGAAAATGATAA+GGG | - | chr8.1:4204604-4204623 | MS.gene035679:intron | 25.0% |
| !! | ATTGTAATTTTATTGTGGAG+GGG | - | chr8.1:4205834-4205853 | MS.gene035679:intron | 25.0% |
| !! | ATTTTGCATCATTTGATCAT+AGG | - | chr8.1:4202756-4202775 | MS.gene035679:intron | 25.0% |
| !! | ATTTTTGATACTTGCATGTA+TGG | - | chr8.1:4202471-4202490 | MS.gene035679:intron | 25.0% |
| !! | TATCATTTTCAGAGAGAATT+AGG | + | chr8.1:4204603-4204622 | None:intergenic | 25.0% |
| !! | TTTTGCATCATTTGATCATA+GGG | - | chr8.1:4202757-4202776 | MS.gene035679:intron | 25.0% |
| !!! | AAATTTCAAGTTTGGGATTT+AGG | - | chr8.1:4202573-4202592 | MS.gene035679:intron | 25.0% |
| !!! | CAACTTTTATTTTATACAGG+TGG | - | chr8.1:4203956-4203975 | MS.gene035679:intron | 25.0% |
| !!! | CTTATTCATTTTTGAAACTG+CGG | - | chr8.1:4204751-4204770 | MS.gene035679:intron | 25.0% |
| !!! | GTTTTAAACTTTAAGTTTGC+TGG | - | chr8.1:4203580-4203599 | MS.gene035679:intron | 25.0% |
| !!! | TGAATTTTGATATAGTGCAA+GGG | - | chr8.1:4203716-4203735 | MS.gene035679:intron | 25.0% |
| !!! | TTGAATTTTGATATAGTGCA+AGG | - | chr8.1:4203715-4203734 | MS.gene035679:intron | 25.0% |
| !!! | TTTTTGACTGAATCTAATTC+TGG | - | chr8.1:4205498-4205517 | MS.gene035679:intron | 25.0% |
| AAAAACAGTGGTTGTTGTAT+AGG | + | chr8.1:4203420-4203439 | None:intergenic | 30.0% | |
| AAAAGGAATTGCATGATGAA+TGG | + | chr8.1:4204189-4204208 | None:intergenic | 30.0% | |
| AAACTAATTCCTCTTAGCTT+AGG | + | chr8.1:4205481-4205500 | None:intergenic | 30.0% | |
| AAATACTAGCAAGCATACAT+GGG | - | chr8.1:4203552-4203571 | MS.gene035679:intron | 30.0% | |
| AAATCTAGTCAAAGGAGAAA+CGG | + | chr8.1:4205997-4206016 | None:intergenic | 30.0% | |
| ACAAGATTAAAAATCGCCAA+TGG | - | chr8.1:4206441-4206460 | MS.gene035679:intron | 30.0% | |
| ACAATCTCATGTGATATTGT+AGG | - | chr8.1:4204433-4204452 | MS.gene035679:intron | 30.0% | |
| ACACACTTCATTTACAACTT+TGG | - | chr8.1:4205206-4205225 | MS.gene035679:intron | 30.0% | |
| ATAACATGGTAATCTCAACA+AGG | + | chr8.1:4202728-4202747 | None:intergenic | 30.0% | |
| ATCATTTGATCATAGGGATA+AGG | - | chr8.1:4202763-4202782 | MS.gene035679:intron | 30.0% | |
| ATTAGAAATTGAAACAAGCC+AGG | + | chr8.1:4203933-4203952 | None:intergenic | 30.0% | |
| CTCAACAAGGAAAGATAATA+CGG | + | chr8.1:4202715-4202734 | None:intergenic | 30.0% | |
| GTACTATAGAAGAATGATGT+AGG | - | chr8.1:4205431-4205450 | MS.gene035679:intron | 30.0% | |
| TAAATACTAGCAAGCATACA+TGG | - | chr8.1:4203551-4203570 | MS.gene035679:intron | 30.0% | |
| TAACTATTCTCCTTTGACTA+TGG | - | chr8.1:4206022-4206041 | MS.gene035679:intron | 30.0% | |
| TACTAGAAATACACACATCA+AGG | + | chr8.1:4204266-4204285 | None:intergenic | 30.0% | |
| TATTGCAATTTACAAGGGAT+TGG | - | chr8.1:4205273-4205292 | MS.gene035679:intron | 30.0% | |
| TCAGAGAGAATTAGGAAATT+TGG | + | chr8.1:4204595-4204614 | None:intergenic | 30.0% | |
| TCATGTGATATTGTAGGTTA+AGG | - | chr8.1:4204439-4204458 | MS.gene035679:intron | 30.0% | |
| TCGGAAACAACTTAAAACTA+TGG | - | chr8.1:4205741-4205760 | MS.gene035679:intron | 30.0% | |
| TGATTATTTGATACAGCGAT+CGG | - | chr8.1:4202516-4202535 | MS.gene035679:intron | 30.0% | |
| TGATTCATCCTAATTGGAAT+AGG | - | chr8.1:4205525-4205544 | MS.gene035679:intron | 30.0% | |
| TTACAAAAAATTACTGGTGC+TGG | + | chr8.1:4203013-4203032 | None:intergenic | 30.0% | |
| TTGCATATCTTAATGACTTG+TGG | - | chr8.1:4203156-4203175 | MS.gene035679:intron | 30.0% | |
| TTTCAGGAAGAAGAACTAAA+AGG | - | chr8.1:4206122-4206141 | MS.gene035679:intron | 30.0% | |
| ! | AAGCTTCACGTAATCTATTT+TGG | + | chr8.1:4205396-4205415 | None:intergenic | 30.0% |
| ! | ATGAAGAAGCATACATAGAA+TGG | + | chr8.1:4202217-4202236 | None:intergenic | 30.0% |
| ! | ATTCCTACCTCTAAGAAAAA+AGG | + | chr8.1:4203252-4203271 | None:intergenic | 30.0% |
| ! | TGCATATCTTAATGACTTGT+GGG | - | chr8.1:4203157-4203176 | MS.gene035679:intron | 30.0% |
| !! | AATGCTATTTCAAGGTAGTT+AGG | - | chr8.1:4206538-4206557 | MS.gene035679:CDS | 30.0% |
| !! | TAGGTGTTGTTTGTGATTAT+AGG | - | chr8.1:4205450-4205469 | MS.gene035679:intron | 30.0% |
| !! | TCTCATTTTTGCAAACAAAC+AGG | - | chr8.1:4206154-4206173 | MS.gene035679:intron | 30.0% |
| !! | TTACTTTTACAACGAATAGC+TGG | - | chr8.1:4204075-4204094 | MS.gene035679:intron | 30.0% |
| !!! | ATCGTTGTTTTGAATGATTG+GGG | - | chr8.1:4205553-4205572 | MS.gene035679:intron | 30.0% |
| !!! | GATCGTTGTTTTGAATGATT+GGG | - | chr8.1:4205552-4205571 | MS.gene035679:intron | 30.0% |
| !!! | TGATCGTTGTTTTGAATGAT+TGG | - | chr8.1:4205551-4205570 | MS.gene035679:intron | 30.0% |
| AACATGTAACAAAGCGAGTT+TGG | - | chr8.1:4203634-4203653 | MS.gene035679:CDS | 35.0% | |
| AGTGGTTGTTGTATAGGATT+TGG | + | chr8.1:4203414-4203433 | None:intergenic | 35.0% | |
| ATTGACATAGTCCTATGAGT+AGG | + | chr8.1:4203507-4203526 | None:intergenic | 35.0% | |
| ATTGAGTACAGGATTTAGTG+AGG | + | chr8.1:4203443-4203462 | None:intergenic | 35.0% | |
| CAAGTATCAGGTAAACCTTA+TGG | - | chr8.1:4203984-4204003 | MS.gene035679:intron | 35.0% | |
| CTAAGAAAATAGCTTGACAC+AGG | + | chr8.1:4203790-4203809 | None:intergenic | 35.0% | |
| CTAATTAACTGCAGAAGGAT+TGG | + | chr8.1:4204297-4204316 | None:intergenic | 35.0% | |
| CTATAAGCTCAAATGACTGT+AGG | + | chr8.1:4203864-4203883 | None:intergenic | 35.0% | |
| GAACGTTGCCTATAAACAAA+AGG | + | chr8.1:4204648-4204667 | None:intergenic | 35.0% | |
| GACAACAAAACCATAGTCAA+AGG | + | chr8.1:4206035-4206054 | None:intergenic | 35.0% | |
| GATCAAAGCCTATTCCAATT+AGG | + | chr8.1:4205536-4205555 | None:intergenic | 35.0% | |
| GATGCAAGAATGAAACCATA+AGG | + | chr8.1:4204002-4204021 | None:intergenic | 35.0% | |
| GATTATTTGATACAGCGATC+GGG | - | chr8.1:4202517-4202536 | MS.gene035679:intron | 35.0% | |
| GATTTAGTGAGGAAAAACAG+TGG | + | chr8.1:4203432-4203451 | None:intergenic | 35.0% | |
| GCCATTTCACTTGTAAATGT+GGG | - | chr8.1:4204873-4204892 | MS.gene035679:intron | 35.0% | |
| GGTGTTTGATTCATCCTAAT+TGG | - | chr8.1:4205519-4205538 | MS.gene035679:intron | 35.0% | |
| GTAAAAACTCTACCTTCAGT+GGG | - | chr8.1:4203064-4203083 | MS.gene035679:intron | 35.0% | |
| GTGCATGTGCATAGATAATA+TGG | - | chr8.1:4206292-4206311 | MS.gene035679:intron | 35.0% | |
| GTGGTTGTTGTATAGGATTT+GGG | + | chr8.1:4203413-4203432 | None:intergenic | 35.0% | |
| GTTGCCTATAAACAAAAGGA+GGG | + | chr8.1:4204644-4204663 | None:intergenic | 35.0% | |
| TAGGAAATTTGGCCATAAAG+AGG | + | chr8.1:4204584-4204603 | None:intergenic | 35.0% | |
| TCACACTAATTAACTGCAGA+AGG | + | chr8.1:4204302-4204321 | None:intergenic | 35.0% | |
| TCCCACATTTACAAGTGAAA+TGG | + | chr8.1:4204877-4204896 | None:intergenic | 35.0% | |
| TGCAGCATCACTACTTATTT+AGG | + | chr8.1:4206575-4206594 | None:intergenic | 35.0% | |
| TTACCTAGACCAAACTAGTA+TGG | - | chr8.1:4202840-4202859 | MS.gene035679:intron | 35.0% | |
| TTGATACTTGCATGTATGGA+TGG | - | chr8.1:4202475-4202494 | MS.gene035679:intron | 35.0% | |
| TTGATTCAAGTGACACTGAT+AGG | - | chr8.1:4205106-4205125 | MS.gene035679:intron | 35.0% | |
| TTGCCTATAAACAAAAGGAG+GGG | + | chr8.1:4204643-4204662 | None:intergenic | 35.0% | |
| TTGTGGAAAGAAATGCTTTG+TGG | - | chr8.1:4204783-4204802 | MS.gene035679:intron | 35.0% | |
| TTTGAATTAACCTGTGAACC+TGG | - | chr8.1:4203465-4203484 | MS.gene035679:intron | 35.0% | |
| ! | AAACCATACTAGTTTGGTCT+AGG | + | chr8.1:4202846-4202865 | None:intergenic | 35.0% |
| ! | AAGAAGCATACATAGAATGG+TGG | + | chr8.1:4202214-4202233 | None:intergenic | 35.0% |
| ! | ACATAGAATGGTGGTTTTTC+CGG | + | chr8.1:4202205-4202224 | None:intergenic | 35.0% |
| ! | AGTGCTATTGTAATAAGTCC+TGG | - | chr8.1:4203912-4203931 | MS.gene035679:intron | 35.0% |
| ! | ATACTAGTTTGGTCTAGGTA+AGG | + | chr8.1:4202841-4202860 | None:intergenic | 35.0% |
| ! | ATGCACATATTTTCACTAGG+GGG | - | chr8.1:4206202-4206221 | MS.gene035679:intron | 35.0% |
| ! | CTTATTTCTTCTGACCATCT+CGG | - | chr8.1:4204668-4204687 | MS.gene035679:intron | 35.0% |
| ! | GATGCACATATTTTCACTAG+GGG | - | chr8.1:4206201-4206220 | MS.gene035679:intron | 35.0% |
| ! | GGATGCACATATTTTCACTA+GGG | - | chr8.1:4206200-4206219 | MS.gene035679:intron | 35.0% |
| ! | TAAGTTGTTTCCGACTATCA+AGG | + | chr8.1:4205735-4205754 | None:intergenic | 35.0% |
| ! | TGAATTCTTTTCCCATCTTG+TGG | + | chr8.1:4204970-4204989 | None:intergenic | 35.0% |
| ! | TGCCATTTCACTTGTAAATG+TGG | - | chr8.1:4204872-4204891 | MS.gene035679:intron | 35.0% |
| ! | TGGATAATTTTGTCCTCTTC+TGG | - | chr8.1:4203654-4203673 | MS.gene035679:CDS | 35.0% |
| ! | TGGATGCACATATTTTCACT+AGG | - | chr8.1:4206199-4206218 | MS.gene035679:CDS | 35.0% |
| ! | TTCATCTGTTTTCGGTAACA+AGG | - | chr8.1:4202146-4202165 | MS.gene035679:intron | 35.0% |
| ! | TTTTTGTCCATAGGCCATAT+TGG | - | chr8.1:4205043-4205062 | MS.gene035679:intron | 35.0% |
| !! | AAAAAAGGCCTTAGTTTGTC+CGG | + | chr8.1:4203237-4203256 | None:intergenic | 35.0% |
| !! | CTTCACGTAATCTATTTTGG+TGG | + | chr8.1:4205393-4205412 | None:intergenic | 35.0% |
| !! | TTCTTGCATCTTTTGACTGA+TGG | - | chr8.1:4204012-4204031 | MS.gene035679:intron | 35.0% |
| !!! | AAGTTTGCTGGTCTCATTTT+TGG | - | chr8.1:4203592-4203611 | MS.gene035679:CDS | 35.0% |
| !!! | ACTAAGGCCTTTTTTCTTAG+AGG | - | chr8.1:4203242-4203261 | MS.gene035679:intron | 35.0% |
| !!! | AGTTTGCTGGTCTCATTTTT+GGG | - | chr8.1:4203593-4203612 | MS.gene035679:CDS | 35.0% |
| !!! | TCGTTGTTTTGAATGATTGG+GGG | - | chr8.1:4205554-4205573 | MS.gene035679:intron | 35.0% |
| AAAAAATCACCAGCCAGAAG+AGG | + | chr8.1:4203670-4203689 | None:intergenic | 40.0% | |
| AAAGATGCTGCAGAACTTAG+AGG | - | chr8.1:4204551-4204570 | MS.gene035679:intron | 40.0% | |
| AAATGAAGTGTGTGTGTGTG+TGG | + | chr8.1:4205199-4205218 | None:intergenic | 40.0% | |
| AAGATGCTGCAGAACTTAGA+GGG | - | chr8.1:4204552-4204571 | MS.gene035679:intron | 40.0% | |
| AATGAAGTGTGTGTGTGTGT+GGG | + | chr8.1:4205198-4205217 | None:intergenic | 40.0% | |
| AATGAGATCGAGTACGAACT+TGG | + | chr8.1:4202339-4202358 | None:intergenic | 40.0% | |
| ACACACATCAAGGACTTAGT+AGG | + | chr8.1:4204256-4204275 | None:intergenic | 40.0% | |
| ACATAGTCCTATGAGTAGGA+TGG | + | chr8.1:4203503-4203522 | None:intergenic | 40.0% | |
| ACTAAAACGCTGGACACAAT+AGG | + | chr8.1:4203105-4203124 | None:intergenic | 40.0% | |
| ACTTCTGCTATAAAAGGCGA+AGG | - | chr8.1:4206476-4206495 | MS.gene035679:intron | 40.0% | |
| CAAGTGACCTACTCTACAAA+GGG | + | chr8.1:4203139-4203158 | None:intergenic | 40.0% | |
| CACTAAACATGCAACGACAT+AGG | + | chr8.1:4203044-4203063 | None:intergenic | 40.0% | |
| CGAGATGGTCAGAAGAAATA+AGG | + | chr8.1:4204670-4204689 | None:intergenic | 40.0% | |
| CGTTGCCTATAAACAAAAGG+AGG | + | chr8.1:4204645-4204664 | None:intergenic | 40.0% | |
| CTACAAAAATTGCCCACTGA+AGG | + | chr8.1:4203079-4203098 | None:intergenic | 40.0% | |
| CTATGTCGTTGCATGTTTAG+TGG | - | chr8.1:4203042-4203061 | MS.gene035679:intron | 40.0% | |
| CTCTACAAAGGGATGGAAAT+TGG | + | chr8.1:4203128-4203147 | None:intergenic | 40.0% | |
| GCTATGAAGCTGATATGATC+AGG | - | chr8.1:4206254-4206273 | MS.gene035679:intron | 40.0% | |
| GGAAAGTAACACCTCCAATA+TGG | + | chr8.1:4205060-4205079 | None:intergenic | 40.0% | |
| GGTAAAAACTCTACCTTCAG+TGG | - | chr8.1:4203063-4203082 | MS.gene035679:intron | 40.0% | |
| TAAGTGAGAGTGAGAGACTT+AGG | + | chr8.1:4204706-4204725 | None:intergenic | 40.0% | |
| TACTTGCATGTATGGATGGA+TGG | - | chr8.1:4202479-4202498 | MS.gene035679:intron | 40.0% | |
| TCACAGGAAAATCGAAAACC+AGG | - | chr8.1:4204935-4204954 | MS.gene035679:intron | 40.0% | |
| TGATAGGCTTGTGATAGCTA+GGG | - | chr8.1:4205122-4205141 | MS.gene035679:intron | 40.0% | |
| TGCAATTTACAAGGGATTGG+CGG | - | chr8.1:4205276-4205295 | MS.gene035679:intron | 40.0% | |
| TGCAGCATCTTTCTGTTGTT+GGG | + | chr8.1:4204543-4204562 | None:intergenic | 40.0% | |
| TGGAAATTGGACTAAAACGC+TGG | + | chr8.1:4203115-4203134 | None:intergenic | 40.0% | |
| TTTCCATCCCTTTGTAGAGT+AGG | - | chr8.1:4203129-4203148 | MS.gene035679:intron | 40.0% | |
| ! | AAAAGGCGAAGGACTTTTTG+AGG | - | chr8.1:4206487-4206506 | MS.gene035679:intron | 40.0% |
| ! | AAAGGCGAAGGACTTTTTGA+GGG | - | chr8.1:4206488-4206507 | MS.gene035679:intron | 40.0% |
| ! | AGTTTTTCCCGGACAAACTA+AGG | - | chr8.1:4203226-4203245 | MS.gene035679:intron | 40.0% |
| ! | CTTCAGTGGGCAATTTTTGT+AGG | - | chr8.1:4203077-4203096 | MS.gene035679:intron | 40.0% |
| ! | GTAGATCCTGCATAATGGAA+CGG | + | chr8.1:4206376-4206395 | None:intergenic | 40.0% |
| ! | TAATTTTGTCCTCTTCTGGC+TGG | - | chr8.1:4203658-4203677 | MS.gene035679:CDS | 40.0% |
| ! | TAGATCCTGCATAATGGAAC+GGG | + | chr8.1:4206375-4206394 | None:intergenic | 40.0% |
| ! | TCTTTTCCCATCTTGTGGTT+TGG | + | chr8.1:4204965-4204984 | None:intergenic | 40.0% |
| ! | TGCACATATTTTCACTAGGG+GGG | - | chr8.1:4206203-4206222 | MS.gene035679:intron | 40.0% |
| ! | TTCATGCACTCCTTGATAGT+CGG | - | chr8.1:4205722-4205741 | MS.gene035679:intron | 40.0% |
| !! | AAAAAGGCCTTAGTTTGTCC+GGG | + | chr8.1:4203236-4203255 | None:intergenic | 40.0% |
| !! | CAACCCCTCCTTTTGTTTAT+AGG | - | chr8.1:4204637-4204656 | MS.gene035679:intron | 40.0% |
| !! | TTTTCAGATCGGCTTCAGAT+GGG | - | chr8.1:4202294-4202313 | MS.gene035679:CDS | 40.0% |
| !! | TTTTTCAGATCGGCTTCAGA+TGG | - | chr8.1:4202293-4202312 | MS.gene035679:CDS | 40.0% |
| !!! | AGGCCTTTTTTCTTAGAGGT+AGG | - | chr8.1:4203246-4203265 | MS.gene035679:intron | 40.0% |
| !!! | CACGTAATCTATTTTGGTGG+TGG | + | chr8.1:4205390-4205409 | None:intergenic | 40.0% |
| AACACCTCCAATATGGCCTA+TGG | + | chr8.1:4205053-4205072 | None:intergenic | 45.0% | |
| AACGAATAGCTGGTGACTTC+TGG | - | chr8.1:4204085-4204104 | MS.gene035679:intron | 45.0% | |
| AACTGCGGTAGCTCATATTG+TGG | - | chr8.1:4204766-4204785 | MS.gene035679:intron | 45.0% | |
| AATTTGAACCAGCGTAGCTC+AGG | - | chr8.1:4203274-4203293 | MS.gene035679:intron | 45.0% | |
| ACTAGGGGGGATAAGAAGTA+AGG | - | chr8.1:4206216-4206235 | MS.gene035679:intron | 45.0% | |
| CACATACCTCCAGAATTGCA+TGG | + | chr8.1:4205155-4205174 | None:intergenic | 45.0% | |
| CAGCATCTTTCTGTTGTTGG+GGG | + | chr8.1:4204541-4204560 | None:intergenic | 45.0% | |
| CAGGAAAATCGAAAACCAGG+TGG | - | chr8.1:4204938-4204957 | MS.gene035679:intron | 45.0% | |
| CTAGGGGGGATAAGAAGTAA+GGG | - | chr8.1:4206217-4206236 | MS.gene035679:intron | 45.0% | |
| CTGATAGGCTTGTGATAGCT+AGG | - | chr8.1:4205121-4205140 | MS.gene035679:intron | 45.0% | |
| CTGCAGCATCTTTCTGTTGT+TGG | + | chr8.1:4204544-4204563 | None:intergenic | 45.0% | |
| CTTACCTCCATCCTACTCAT+AGG | - | chr8.1:4203493-4203512 | MS.gene035679:intron | 45.0% | |
| GAAGCTCGAATTCTCGTTCT+CGG | - | chr8.1:4202168-4202187 | MS.gene035679:intron | 45.0% | |
| GAGCAAGTTATCTGAGCTTG+AGG | + | chr8.1:4203359-4203378 | None:intergenic | 45.0% | |
| GATCGAGTACGAACTTGGAA+TGG | + | chr8.1:4202334-4202353 | None:intergenic | 45.0% | |
| GCAAGTGACCTACTCTACAA+AGG | + | chr8.1:4203140-4203159 | None:intergenic | 45.0% | |
| GCAGCATCTTTCTGTTGTTG+GGG | + | chr8.1:4204542-4204561 | None:intergenic | 45.0% | |
| GCATGTCAGAACTACTGCTT+GGG | + | chr8.1:4204855-4204874 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGAATGTGT+AGG | - | chr8.1:4204336-4204355 | MS.gene035679:intron | 45.0% | |
| TAGTCCTATGAGTAGGATGG+AGG | + | chr8.1:4203500-4203519 | None:intergenic | 45.0% | |
| TCCATTATGCAGGATCTACC+AGG | - | chr8.1:4206377-4206396 | MS.gene035679:intron | 45.0% | |
| TGACCTACTCTACAAAGGGA+TGG | + | chr8.1:4203135-4203154 | None:intergenic | 45.0% | |
| TGTATGGATGGATGGCTGAT+TGG | - | chr8.1:4202487-4202506 | MS.gene035679:intron | 45.0% | |
| TGTTGTATAGGATTTGGGCC+TGG | + | chr8.1:4203408-4203427 | None:intergenic | 45.0% | |
| TTGCTTGAGCTTAATGAGCC+AGG | - | chr8.1:4203387-4203406 | MS.gene035679:intron | 45.0% | |
| TTGTCCATAGGCCATATTGG+AGG | - | chr8.1:4205046-4205065 | MS.gene035679:intron | 45.0% | |
| ! | GAGAGACTTAGGTTAGTTGC+TGG | + | chr8.1:4204695-4204714 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr8.1:4205347-4205366 | MS.gene035679:intron | 45.0% |
| !! | GACTTTTTGAGGGACTTGAC+TGG | - | chr8.1:4206498-4206517 | MS.gene035679:intron | 45.0% |
| AGAGGGTCTGCACCTCTTTA+TGG | - | chr8.1:4204569-4204588 | MS.gene035679:intron | 50.0% | |
| AGGTGGACCAAACCACAAGA+TGG | - | chr8.1:4204955-4204974 | MS.gene035679:intron | 50.0% | |
| CAGGTGGGCAAACAAGTATC+AGG | - | chr8.1:4203972-4203991 | MS.gene035679:intron | 50.0% | |
| CGTCACTGCAGCATCATCAA+GGG | + | chr8.1:4206405-4206424 | None:intergenic | 50.0% | |
| GCCTGGTAGATCCTGCATAA+TGG | + | chr8.1:4206381-4206400 | None:intergenic | 50.0% | |
| GGAGGAGTTCCATGCAATTC+TGG | - | chr8.1:4205143-4205162 | MS.gene035679:intron | 50.0% | |
| GGAGTTCCATGCAATTCTGG+AGG | - | chr8.1:4205146-4205165 | MS.gene035679:intron | 50.0% | |
| GGCATGTCAGAACTACTGCT+TGG | + | chr8.1:4204856-4204875 | None:intergenic | 50.0% | |
| GGTGGACCAAACCACAAGAT+GGG | - | chr8.1:4204956-4204975 | MS.gene035679:intron | 50.0% | |
| GTAAGTCAAGCCAGGTTCAC+AGG | + | chr8.1:4203478-4203497 | None:intergenic | 50.0% | |
| GTGGGTGCATGTGTTGTATC+AGG | + | chr8.1:4205180-4205199 | None:intergenic | 50.0% | |
| GTTCTCGGTCTTGACAATGC+CGG | - | chr8.1:4202183-4202202 | MS.gene035679:intron | 50.0% | |
| TAGGCGTCTCCTAAGCTAAG+AGG | - | chr8.1:4205469-4205488 | MS.gene035679:intron | 50.0% | |
| TAGGCTTGTGATAGCTAGGG+AGG | - | chr8.1:4205125-4205144 | MS.gene035679:intron | 50.0% | |
| TGTGTCCCGTTCCATTATGC+AGG | - | chr8.1:4206367-4206386 | MS.gene035679:intron | 50.0% | |
| !! | ATCTTGTGGTTTGGTCCACC+TGG | + | chr8.1:4204956-4204975 | None:intergenic | 50.0% |
| !! | CCTTGATGATGCTGCAGTGA+CGG | - | chr8.1:4206403-4206422 | MS.gene035679:intron | 50.0% |
| AAGCCAAACCTGAGCTACGC+TGG | + | chr8.1:4203285-4203304 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr8.1:4205345-4205364 | None:intergenic | 55.0% | |
| CCGTCACTGCAGCATCATCA+AGG | + | chr8.1:4206406-4206425 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr8.1:4205342-4205361 | MS.gene035679:intron | 55.0% | |
| GAACCAGCGTAGCTCAGGTT+TGG | - | chr8.1:4203279-4203298 | MS.gene035679:intron | 55.0% | |
| GGATGGAGGTAAGTCAAGCC+AGG | + | chr8.1:4203486-4203505 | None:intergenic | 55.0% | |
| GGGGGATAAGAAGTAAGGGC+TGG | - | chr8.1:4206221-4206240 | MS.gene035679:intron | 55.0% | |
| ! | GGTTAGTTGCTGGACCGAGA+TGG | + | chr8.1:4204685-4204704 | None:intergenic | 55.0% |
| !! | GCAGCATCATCAAGGGCGCC+TGG | + | chr8.1:4206398-4206417 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4202120 | 4206630 | 4202120 | ID=MS.gene035679 |
| chr8.1 | mRNA | 4202120 | 4206630 | 4202120 | ID=MS.gene035679.t1;Parent=MS.gene035679 |
| chr8.1 | exon | 4206528 | 4206630 | 4206528 | ID=MS.gene035679.t1.exon1;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4206528 | 4206630 | 4206528 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| chr8.1 | exon | 4206411 | 4206449 | 4206411 | ID=MS.gene035679.t1.exon2;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4206411 | 4206449 | 4206411 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| chr8.1 | exon | 4206156 | 4206218 | 4206156 | ID=MS.gene035679.t1.exon3;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4206156 | 4206218 | 4206156 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| chr8.1 | exon | 4204757 | 4204775 | 4204757 | ID=MS.gene035679.t1.exon4;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4204757 | 4204775 | 4204757 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| chr8.1 | exon | 4203583 | 4203694 | 4203583 | ID=MS.gene035679.t1.exon5;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4203583 | 4203694 | 4203583 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| chr8.1 | exon | 4202575 | 4202622 | 4202575 | ID=MS.gene035679.t1.exon6;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4202575 | 4202622 | 4202575 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| chr8.1 | exon | 4202231 | 4202361 | 4202231 | ID=MS.gene035679.t1.exon7;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4202231 | 4202361 | 4202231 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| chr8.1 | exon | 4202120 | 4202126 | 4202120 | ID=MS.gene035679.t1.exon8;Parent=MS.gene035679.t1 |
| chr8.1 | CDS | 4202120 | 4202126 | 4202120 | ID=cds.MS.gene035679.t1;Parent=MS.gene035679.t1 |
| Gene Sequence |
| Protein sequence |
