Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20302.t1 | XP_003611565.1 | 100 | 184 | 0 | 0 | 1 | 184 | 1 | 184 | 4.40E-99 | 370.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20302.t1 | Q8VY57 | 92.9 | 184 | 13 | 0 | 1 | 184 | 1 | 184 | 1.2e-94 | 347.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20302.t1 | G7K2H2 | 100.0 | 184 | 0 | 0 | 1 | 184 | 1 | 184 | 3.2e-99 | 370.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene20302 | 0.814171 | 1.76E-51 | -1.69E-46 |
| MS.gene049341 | MS.gene20302 | 0.807471 | 4.97E-50 | -1.69E-46 |
| MS.gene049382 | MS.gene20302 | 0.802784 | 4.76E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene20302 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene20302 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene049808 | MS.gene20302 | 0.820302 | 7.37E-53 | -1.69E-46 |
| MS.gene050237 | MS.gene20302 | 0.809404 | 1.92E-50 | -1.69E-46 |
| MS.gene050277 | MS.gene20302 | 0.867961 | 9.30E-66 | -1.69E-46 |
| MS.gene050384 | MS.gene20302 | 0.819672 | 1.03E-52 | -1.69E-46 |
| MS.gene050386 | MS.gene20302 | 0.831313 | 1.79E-55 | -1.69E-46 |
| MS.gene050437 | MS.gene20302 | 0.805831 | 1.10E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene20302 | 0.805589 | 1.24E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene20302 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene050815 | MS.gene20302 | 0.812113 | 4.99E-51 | -1.69E-46 |
| MS.gene051063 | MS.gene20302 | 0.801115 | 1.05E-48 | -1.69E-46 |
| MS.gene051241 | MS.gene20302 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene051243 | MS.gene20302 | 0.867974 | 9.21E-66 | -1.69E-46 |
| MS.gene051245 | MS.gene20302 | 0.852294 | 5.07E-61 | -1.69E-46 |
| MS.gene051328 | MS.gene20302 | 0.811469 | 6.89E-51 | -1.69E-46 |
| MS.gene05134 | MS.gene20302 | 0.837025 | 6.63E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene20302 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene051746 | MS.gene20302 | 0.818408 | 1.99E-52 | -1.69E-46 |
| MS.gene051748 | MS.gene20302 | 0.822541 | 2.24E-53 | -1.69E-46 |
| MS.gene051757 | MS.gene20302 | 0.801638 | 8.19E-49 | -1.69E-46 |
| MS.gene051903 | MS.gene20302 | 0.812784 | 3.56E-51 | -1.69E-46 |
| MS.gene052286 | MS.gene20302 | 0.848204 | 7.11E-60 | -1.69E-46 |
| MS.gene052947 | MS.gene20302 | 0.824893 | 6.31E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene20302 | 0.803411 | 3.53E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene20302 | 0.825892 | 3.66E-54 | -1.69E-46 |
| MS.gene053188 | MS.gene20302 | 0.811468 | 6.90E-51 | -1.69E-46 |
| MS.gene053216 | MS.gene20302 | 0.827307 | 1.68E-54 | -1.69E-46 |
| MS.gene053590 | MS.gene20302 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene054250 | MS.gene20302 | 0.800996 | 1.11E-48 | -1.69E-46 |
| MS.gene054537 | MS.gene20302 | 0.813916 | 2.01E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene20302 | 0.823658 | 1.23E-53 | -1.69E-46 |
| MS.gene055174 | MS.gene20302 | 0.819478 | 1.14E-52 | -1.69E-46 |
| MS.gene055424 | MS.gene20302 | 0.820015 | 8.57E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene20302 | 0.801914 | 7.19E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene20302 | -0.8006 | 1.34E-48 | -1.69E-46 |
| MS.gene056432 | MS.gene20302 | 0.800983 | 1.12E-48 | -1.69E-46 |
| MS.gene056580 | MS.gene20302 | 0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene056601 | MS.gene20302 | 0.809636 | 1.72E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene20302 | 0.821407 | 4.11E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene20302 | 0.8328 | 7.69E-56 | -1.69E-46 |
| MS.gene057057 | MS.gene20302 | 0.856058 | 4.16E-62 | -1.69E-46 |
| MS.gene057079 | MS.gene20302 | 0.818522 | 1.88E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene20302 | 0.834829 | 2.39E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene20302 | 0.89663 | 3.07E-76 | -1.69E-46 |
| MS.gene057287 | MS.gene20302 | 0.811983 | 5.33E-51 | -1.69E-46 |
| MS.gene057392 | MS.gene20302 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene20302 | 0.810259 | 1.26E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene20302 | 0.849992 | 2.26E-60 | -1.69E-46 |
| MS.gene058054 | MS.gene20302 | 0.849656 | 2.81E-60 | -1.69E-46 |
| MS.gene058055 | MS.gene20302 | 0.891998 | 2.38E-74 | -1.69E-46 |
| MS.gene058238 | MS.gene20302 | 0.816464 | 5.46E-52 | -1.69E-46 |
| MS.gene058798 | MS.gene20302 | 0.810217 | 1.29E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene20302 | 0.853608 | 2.14E-61 | -1.69E-46 |
| MS.gene059317 | MS.gene20302 | 0.805426 | 1.34E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene20302 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene20302 | 0.848877 | 4.63E-60 | -1.69E-46 |
| MS.gene06001 | MS.gene20302 | 0.801822 | 7.51E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20302.t1 | MTR_5g015370 | 100.000 | 184 | 0 | 0 | 1 | 184 | 1 | 184 | 1.90e-136 | 379 |
| MS.gene20302.t1 | MTR_5g078090 | 82.967 | 182 | 31 | 0 | 1 | 182 | 1 | 182 | 8.90e-114 | 321 |
| MS.gene20302.t1 | MTR_4g026950 | 90.909 | 165 | 15 | 0 | 20 | 184 | 1 | 165 | 1.16e-108 | 308 |
| MS.gene20302.t1 | MTR_4g128910 | 36.813 | 182 | 112 | 2 | 1 | 182 | 1 | 179 | 1.27e-35 | 123 |
| MS.gene20302.t1 | MTR_7g109960 | 33.152 | 184 | 120 | 2 | 1 | 184 | 1 | 181 | 5.80e-31 | 111 |
| MS.gene20302.t1 | MTR_2g022200 | 32.787 | 183 | 110 | 2 | 2 | 178 | 7 | 182 | 1.41e-30 | 110 |
| MS.gene20302.t1 | MTR_6g005820 | 32.609 | 184 | 121 | 2 | 1 | 184 | 1 | 181 | 1.94e-30 | 110 |
| MS.gene20302.t1 | MTR_1g086480 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 3.90e-30 | 108 |
| MS.gene20302.t1 | MTR_5g034130 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 5.51e-30 | 108 |
| MS.gene20302.t1 | MTR_5g034125 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 5.51e-30 | 108 |
| MS.gene20302.t1 | MTR_5g016540 | 33.735 | 166 | 109 | 1 | 11 | 176 | 9 | 173 | 1.21e-29 | 107 |
| MS.gene20302.t1 | MTR_4g077640 | 29.651 | 172 | 120 | 1 | 5 | 176 | 3 | 173 | 5.32e-26 | 99.0 |
| MS.gene20302.t1 | MTR_8g077540 | 33.735 | 166 | 106 | 3 | 20 | 183 | 17 | 180 | 5.45e-26 | 98.6 |
| MS.gene20302.t1 | MTR_8g077540 | 33.735 | 166 | 106 | 3 | 20 | 183 | 43 | 206 | 2.25e-25 | 97.8 |
| MS.gene20302.t1 | MTR_5g007820 | 30.387 | 181 | 123 | 2 | 5 | 183 | 3 | 182 | 6.17e-25 | 95.9 |
| MS.gene20302.t1 | MTR_1g076550 | 35.811 | 148 | 82 | 2 | 14 | 155 | 12 | 152 | 1.14e-24 | 95.1 |
| MS.gene20302.t1 | MTR_5g007810 | 29.801 | 151 | 105 | 1 | 5 | 155 | 3 | 152 | 3.89e-24 | 94.0 |
| MS.gene20302.t1 | MTR_2g034640 | 31.443 | 194 | 119 | 3 | 1 | 181 | 1 | 193 | 4.94e-23 | 91.3 |
| MS.gene20302.t1 | MTR_7g112090 | 36.601 | 153 | 95 | 2 | 1 | 152 | 1 | 152 | 1.14e-22 | 90.1 |
| MS.gene20302.t1 | MTR_4g121860 | 31.073 | 177 | 109 | 2 | 17 | 181 | 18 | 193 | 1.43e-21 | 87.4 |
| MS.gene20302.t1 | MTR_8g077540 | 34.579 | 107 | 68 | 2 | 20 | 126 | 17 | 121 | 3.19e-16 | 71.6 |
| MS.gene20302.t1 | MTR_2g005500 | 28.402 | 169 | 111 | 5 | 20 | 183 | 10 | 173 | 2.84e-11 | 60.1 |
| MS.gene20302.t1 | MTR_7g103070 | 30.675 | 163 | 97 | 8 | 24 | 177 | 21 | 176 | 4.56e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20302.t1 | AT3G49870 | 92.935 | 184 | 13 | 0 | 1 | 184 | 1 | 184 | 6.19e-127 | 354 |
| MS.gene20302.t1 | AT5G67560 | 92.308 | 182 | 14 | 0 | 1 | 182 | 1 | 182 | 1.78e-125 | 351 |
| MS.gene20302.t1 | AT5G37680 | 80.978 | 184 | 35 | 0 | 1 | 184 | 1 | 184 | 5.81e-115 | 324 |
| MS.gene20302.t1 | AT3G49870 | 92.727 | 165 | 12 | 0 | 20 | 184 | 1 | 165 | 1.77e-112 | 317 |
| MS.gene20302.t1 | AT3G49860 | 80.838 | 167 | 32 | 0 | 18 | 184 | 10 | 176 | 1.72e-98 | 282 |
| MS.gene20302.t1 | AT5G37680 | 78.832 | 137 | 29 | 0 | 48 | 184 | 1 | 137 | 6.27e-81 | 236 |
| MS.gene20302.t1 | AT2G24765 | 33.708 | 178 | 117 | 1 | 7 | 184 | 5 | 181 | 3.29e-33 | 117 |
| MS.gene20302.t1 | AT5G52210 | 35.882 | 170 | 103 | 1 | 14 | 177 | 12 | 181 | 3.39e-33 | 117 |
| MS.gene20302.t1 | AT5G52210 | 35.882 | 170 | 103 | 1 | 14 | 177 | 12 | 181 | 3.39e-33 | 117 |
| MS.gene20302.t1 | AT1G10630 | 32.609 | 184 | 121 | 2 | 1 | 184 | 1 | 181 | 1.55e-30 | 110 |
| MS.gene20302.t1 | AT1G10630 | 32.609 | 184 | 121 | 2 | 1 | 184 | 1 | 181 | 1.55e-30 | 110 |
| MS.gene20302.t1 | AT2G47170 | 32.609 | 184 | 121 | 2 | 1 | 184 | 1 | 181 | 3.52e-30 | 109 |
| MS.gene20302.t1 | AT2G47170 | 32.609 | 184 | 121 | 2 | 1 | 184 | 1 | 181 | 3.52e-30 | 109 |
| MS.gene20302.t1 | AT2G47170 | 32.609 | 184 | 121 | 2 | 1 | 184 | 1 | 181 | 3.52e-30 | 109 |
| MS.gene20302.t1 | AT1G70490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT1G70490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT1G70490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT1G70490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT1G70490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT1G70490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT1G23490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT1G70490 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 6.64e-30 | 108 |
| MS.gene20302.t1 | AT5G14670 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 7.55e-30 | 108 |
| MS.gene20302.t1 | AT5G14670 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 7.55e-30 | 108 |
| MS.gene20302.t1 | AT3G62290 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 9.07e-30 | 108 |
| MS.gene20302.t1 | AT3G62290 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 9.07e-30 | 108 |
| MS.gene20302.t1 | AT3G62290 | 32.065 | 184 | 122 | 2 | 1 | 184 | 1 | 181 | 9.07e-30 | 108 |
| MS.gene20302.t1 | AT5G14670 | 32.240 | 183 | 121 | 2 | 1 | 183 | 1 | 180 | 1.75e-29 | 107 |
| MS.gene20302.t1 | AT3G03120 | 29.070 | 172 | 121 | 1 | 5 | 176 | 3 | 173 | 4.46e-26 | 99.0 |
| MS.gene20302.t1 | AT5G17060 | 29.070 | 172 | 121 | 1 | 5 | 176 | 3 | 173 | 4.60e-26 | 99.0 |
| MS.gene20302.t1 | AT5G17060 | 29.070 | 172 | 121 | 1 | 5 | 176 | 3 | 173 | 4.60e-26 | 99.0 |
| MS.gene20302.t1 | AT2G24765 | 35.484 | 124 | 79 | 1 | 7 | 130 | 5 | 127 | 5.08e-25 | 94.7 |
| MS.gene20302.t1 | AT2G15310 | 30.061 | 163 | 107 | 3 | 17 | 176 | 15 | 173 | 9.93e-25 | 95.9 |
| MS.gene20302.t1 | AT2G18390 | 33.133 | 166 | 107 | 3 | 20 | 183 | 17 | 180 | 4.11e-24 | 94.0 |
| MS.gene20302.t1 | AT3G22950 | 33.803 | 142 | 93 | 1 | 14 | 155 | 12 | 152 | 8.46e-24 | 92.8 |
| MS.gene20302.t1 | AT3G22950 | 33.803 | 142 | 93 | 1 | 14 | 155 | 12 | 152 | 8.46e-24 | 92.8 |
| MS.gene20302.t1 | AT3G03120 | 32.812 | 128 | 85 | 1 | 5 | 132 | 3 | 129 | 1.92e-23 | 90.5 |
| MS.gene20302.t1 | AT3G62560 | 36.765 | 136 | 85 | 1 | 17 | 152 | 18 | 152 | 1.91e-22 | 89.7 |
| MS.gene20302.t1 | AT1G56330 | 31.250 | 192 | 118 | 3 | 1 | 179 | 1 | 191 | 2.06e-22 | 89.7 |
| MS.gene20302.t1 | AT4G02080 | 36.054 | 147 | 92 | 2 | 7 | 152 | 7 | 152 | 4.53e-22 | 88.6 |
| MS.gene20302.t1 | AT1G09180 | 31.959 | 194 | 118 | 3 | 1 | 181 | 1 | 193 | 1.78e-20 | 84.3 |
| MS.gene20302.t1 | AT1G02440 | 25.137 | 183 | 118 | 4 | 13 | 181 | 11 | 188 | 3.00e-17 | 75.9 |
| MS.gene20302.t1 | AT1G02430 | 24.725 | 182 | 118 | 4 | 14 | 181 | 12 | 188 | 2.29e-16 | 73.6 |
| MS.gene20302.t1 | AT1G02430 | 26.712 | 146 | 102 | 2 | 14 | 154 | 12 | 157 | 9.99e-16 | 71.2 |
| MS.gene20302.t1 | AT1G43890 | 33.939 | 165 | 88 | 9 | 24 | 177 | 18 | 172 | 1.52e-11 | 61.2 |
| MS.gene20302.t1 | AT1G43890 | 33.939 | 165 | 88 | 9 | 24 | 177 | 18 | 172 | 1.52e-11 | 61.2 |
| MS.gene20302.t1 | AT1G43890 | 33.939 | 165 | 88 | 9 | 24 | 177 | 18 | 172 | 1.52e-11 | 61.2 |
| MS.gene20302.t1 | AT1G02440 | 25.352 | 142 | 71 | 2 | 13 | 154 | 11 | 117 | 5.37e-11 | 57.8 |
Find 39 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAGTGGTATCCCTTTAT+TGG | 0.240394 | 5.1:-7918119 | MS.gene20302:CDS |
| CTTGATATGCTAAGATTATC+TGG | 0.244755 | 5.1:+7918175 | None:intergenic |
| TTGTTTCCCAACACCAATAA+AGG | 0.252942 | 5.1:+7918106 | None:intergenic |
| GAGATGGAGTTATCTCTTAT+AGG | 0.305630 | 5.1:-7922276 | MS.gene20302:CDS |
| ACAATAAAGTTATGGGATCT+TGG | 0.325152 | 5.1:-7919167 | MS.gene20302:CDS |
| AGTTTCTTAGCTCTTTGATT+TGG | 0.349213 | 5.1:+7917774 | None:intergenic |
| CAATAAAGTTATGGGATCTT+GGG | 0.353435 | 5.1:-7919166 | MS.gene20302:CDS |
| AGATGGAGTTATCTCTTATA+GGG | 0.367558 | 5.1:-7922275 | MS.gene20302:CDS |
| CCATCTCCTGCTTGAAGAAA+AGG | 0.375686 | 5.1:+7922292 | None:intergenic |
| GCAATGTTACAATAAAGTTA+TGG | 0.384617 | 5.1:-7919175 | MS.gene20302:CDS |
| CAATGTTACAATAAAGTTAT+GGG | 0.399340 | 5.1:-7919174 | MS.gene20302:CDS |
| GGTATCCCTTTATTGGTGTT+GGG | 0.432316 | 5.1:-7918112 | MS.gene20302:CDS |
| TGTTTCCCAACACCAATAAA+GGG | 0.437850 | 5.1:+7918107 | None:intergenic |
| TGGTATCCCTTTATTGGTGT+TGG | 0.453471 | 5.1:-7918113 | MS.gene20302:CDS |
| CTTATAGGGCTTCAGAATGC+TGG | 0.462107 | 5.1:-7922261 | MS.gene20302:CDS |
| TGCAGGTGGGATTCAATATG+AGG | 0.498889 | 5.1:-7919211 | MS.gene20302:intron |
| TTACAGCAACAACATTTACA+AGG | 0.527139 | 5.1:+7922229 | None:intergenic |
| ACATCGACTCTGTTATTGAC+TGG | 0.533756 | 5.1:-7917810 | MS.gene20302:CDS |
| AATATGAGGAAAGTAACAAA+AGG | 0.537108 | 5.1:-7919197 | MS.gene20302:CDS |
| GGAAACAAGATTGACAAGGC+AGG | 0.537382 | 5.1:-7918091 | MS.gene20302:CDS |
| GAAACAAGATTGACAAGGCA+GGG | 0.547885 | 5.1:-7918090 | MS.gene20302:CDS |
| CATGTCCTCGCTGTATCCAC+CGG | 0.552693 | 5.1:+7922115 | None:intergenic |
| AAAGGGATACCACTCAATGA+TGG | 0.564623 | 5.1:+7918124 | None:intergenic |
| AACCTAGGTTCCGTAGCATG+TGG | 0.564867 | 5.1:-7919139 | MS.gene20302:CDS |
| AATAAAGTTATGGGATCTTG+GGG | 0.566711 | 5.1:-7919165 | MS.gene20302:CDS |
| GTCAATAACAGAGTCGATGT+TGG | 0.577317 | 5.1:+7917813 | None:intergenic |
| AGTAACGTTCCCACATGCTA+CGG | 0.585403 | 5.1:+7919129 | None:intergenic |
| TACAGCAACAACATTTACAA+GGG | 0.602506 | 5.1:+7922230 | None:intergenic |
| CTGAGCAAGCCATCATTGAG+TGG | 0.608208 | 5.1:-7918133 | MS.gene20302:CDS |
| TAAAGTTATGGGATCTTGGG+GGG | 0.613674 | 5.1:-7919163 | MS.gene20302:CDS |
| GTTTGTTTCATACACAATAG+CGG | 0.619252 | 5.1:+7919094 | None:intergenic |
| ACCTAGGTTCCGTAGCATGT+GGG | 0.619889 | 5.1:-7919138 | MS.gene20302:CDS |
| AAACAAGATTGACAAGGCAG+GGG | 0.626437 | 5.1:-7918089 | MS.gene20302:CDS |
| ACGCGTATCTTACATTTGGT+CGG | 0.630887 | 5.1:+7918045 | None:intergenic |
| TCCCACATGCTACGGAACCT+AGG | 0.638908 | 5.1:+7919137 | None:intergenic |
| GTGGGAACGTTACTGTCGTG+CGG | 0.647989 | 5.1:-7919120 | MS.gene20302:CDS |
| ATAAAGTTATGGGATCTTGG+GGG | 0.665703 | 5.1:-7919164 | MS.gene20302:CDS |
| GTTGGGAAACAAGATTGACA+AGG | 0.714570 | 5.1:-7918095 | MS.gene20302:CDS |
| TTAGACCGGTGGATACAGCG+AGG | 0.780785 | 5.1:-7922120 | MS.gene20302:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGAATACAAAATTGA+AGG | + | chr5.1:7922828-7922847 | None:intergenic | 15.0% |
| !!! | CTAATTTTTATTATTCACTT+GGG | - | chr5.1:7921450-7921469 | MS.gene20302:intron | 15.0% |
| !!! | TGAATTTGTTTGTAATAATT+TGG | - | chr5.1:7917886-7917905 | MS.gene20302:intron | 15.0% |
| !!! | TGTTTATTTTAGTTTTTGTT+GGG | - | chr5.1:7921950-7921969 | MS.gene20302:intron | 15.0% |
| !!! | TTGTTTATTTTAGTTTTTGT+TGG | - | chr5.1:7921949-7921968 | MS.gene20302:intron | 15.0% |
| !!! | TTGTTTATTTTTTGTTGAAT+AGG | - | chr5.1:7917843-7917862 | MS.gene20302:CDS | 15.0% |
| !! | AAAAAGAATAACTCAACAAT+TGG | + | chr5.1:7922014-7922033 | None:intergenic | 20.0% |
| !! | AAGAATAATATTAAGGCTTT+AGG | + | chr5.1:7921911-7921930 | None:intergenic | 20.0% |
| !! | AATCAGCAAGAATAATATTA+AGG | + | chr5.1:7921918-7921937 | None:intergenic | 20.0% |
| !! | ATTTCTATTGTTATAACTGA+CGG | - | chr5.1:7920119-7920138 | MS.gene20302:intron | 20.0% |
| !! | CAATGTTACAATAAAGTTAT+GGG | - | chr5.1:7921584-7921603 | MS.gene20302:intron | 20.0% |
| !! | CCAAGTGAATAATAAAAATT+AGG | + | chr5.1:7921452-7921471 | None:intergenic | 20.0% |
| !! | TAAATAAACAAGGTAAAATC+TGG | + | chr5.1:7921988-7922007 | None:intergenic | 20.0% |
| !! | TAATAAGCTATACGATAAAT+AGG | - | chr5.1:7918935-7918954 | MS.gene20302:intron | 20.0% |
| !! | TAGTTAATTGTTATCAATCA+CGG | + | chr5.1:7921179-7921198 | None:intergenic | 20.0% |
| !! | TCAGTTATAACAATAGAAAT+AGG | + | chr5.1:7920119-7920138 | None:intergenic | 20.0% |
| !! | TGATTTACAAATCATATCAA+AGG | + | chr5.1:7917935-7917954 | None:intergenic | 20.0% |
| !! | TTCAATTATTTGATACAGAT+GGG | - | chr5.1:7920980-7920999 | MS.gene20302:intron | 20.0% |
| !!! | AAAAATGATTTTTATCCCTA+AGG | + | chr5.1:7918254-7918273 | None:intergenic | 20.0% |
| !!! | AAAATGATTTTTATCCCTAA+GGG | + | chr5.1:7918253-7918272 | None:intergenic | 20.0% |
| !!! | ATTTTATTCATTAACTTCCT+AGG | + | chr5.1:7922783-7922802 | None:intergenic | 20.0% |
| !!! | CCTAATTTTTATTATTCACT+TGG | - | chr5.1:7921449-7921468 | MS.gene20302:intron | 20.0% |
| !!! | CTTTCCTGTATTTTTTTTAA+CGG | + | chr5.1:7921323-7921342 | None:intergenic | 20.0% |
| !!! | GATATGATTTGTAAATCAAT+TGG | - | chr5.1:7917937-7917956 | MS.gene20302:intron | 20.0% |
| !!! | GTTTATTTTAGTTTTTGTTG+GGG | - | chr5.1:7921951-7921970 | MS.gene20302:intron | 20.0% |
| !!! | TAGAAAAAAGTTTGTTATTG+TGG | - | chr5.1:7918854-7918873 | MS.gene20302:intron | 20.0% |
| !!! | TATTTATATTGCTTTTAGAC+CGG | - | chr5.1:7918624-7918643 | MS.gene20302:intron | 20.0% |
| !!! | TGTATTCTTTTTTATCTGTT+TGG | - | chr5.1:7922835-7922854 | MS.gene20302:intron | 20.0% |
| !!! | TTGAAATTTTTTCCTTACTT+GGG | - | chr5.1:7920291-7920310 | MS.gene20302:intron | 20.0% |
| !!! | TTTCCTGTATTTTTTTTAAC+GGG | + | chr5.1:7921322-7921341 | None:intergenic | 20.0% |
| !!! | TTTGAAATTTTTTCCTTACT+TGG | - | chr5.1:7920290-7920309 | MS.gene20302:intron | 20.0% |
| ! | AAACTGATGTGTTCAAAAAT+GGG | + | chr5.1:7919761-7919780 | None:intergenic | 25.0% |
| ! | AAAGAATACAAAATTGAAGG+AGG | + | chr5.1:7922825-7922844 | None:intergenic | 25.0% |
| ! | AAAGTCAATATGTACTTCAA+AGG | + | chr5.1:7921375-7921394 | None:intergenic | 25.0% |
| ! | AAATATGTAGCATGATGTTA+TGG | - | chr5.1:7920585-7920604 | MS.gene20302:intron | 25.0% |
| ! | AAATTAAGTGCTATGTGAAA+AGG | + | chr5.1:7918316-7918335 | None:intergenic | 25.0% |
| ! | AACCATTTCTATAATCAAAG+AGG | - | chr5.1:7918079-7918098 | MS.gene20302:CDS | 25.0% |
| ! | AAGTCAATATGTACTTCAAA+GGG | + | chr5.1:7921374-7921393 | None:intergenic | 25.0% |
| ! | AATATGAGGAAAGTAACAAA+AGG | - | chr5.1:7921561-7921580 | MS.gene20302:intron | 25.0% |
| ! | AATATGTAGCATGATGTTAT+GGG | - | chr5.1:7920586-7920605 | MS.gene20302:intron | 25.0% |
| ! | AATTAAGTGCTATGTGAAAA+GGG | + | chr5.1:7918315-7918334 | None:intergenic | 25.0% |
| ! | ACAAATACAATAGATCTAAG+AGG | + | chr5.1:7922426-7922445 | None:intergenic | 25.0% |
| ! | ACATCAACTTAAACATCATT+TGG | - | chr5.1:7920441-7920460 | MS.gene20302:intron | 25.0% |
| ! | ACCATTTCTATAATCAAAGA+GGG | - | chr5.1:7918080-7918099 | MS.gene20302:CDS | 25.0% |
| ! | AGGATCAGTTTGATTAATTA+AGG | - | chr5.1:7921225-7921244 | MS.gene20302:intron | 25.0% |
| ! | ATAACATCATGCTACATATT+TGG | + | chr5.1:7920586-7920605 | None:intergenic | 25.0% |
| ! | ATATCTTTGCAAATAGCTTT+AGG | + | chr5.1:7919927-7919946 | None:intergenic | 25.0% |
| ! | ATGATTAGAAGGATTCATTA+GGG | - | chr5.1:7918892-7918911 | MS.gene20302:intron | 25.0% |
| ! | ATTGACTATTAAATAGGAAG+AGG | - | chr5.1:7919528-7919547 | MS.gene20302:intron | 25.0% |
| ! | CAATTGGTTGTAAATAAACA+AGG | + | chr5.1:7921998-7922017 | None:intergenic | 25.0% |
| ! | CACATTAGAAGGAAAAAATT+GGG | - | chr5.1:7919327-7919346 | MS.gene20302:intron | 25.0% |
| ! | CAGATAAAATACATGCAATA+AGG | + | chr5.1:7920683-7920702 | None:intergenic | 25.0% |
| ! | CTAACACAAACAAATAGAAT+AGG | + | chr5.1:7918716-7918735 | None:intergenic | 25.0% |
| ! | GAGTAATAAAAATTGGATGA+AGG | + | chr5.1:7919104-7919123 | None:intergenic | 25.0% |
| ! | GCAATGTTACAATAAAGTTA+TGG | - | chr5.1:7921583-7921602 | MS.gene20302:intron | 25.0% |
| ! | GTTCAATTATTTGATACAGA+TGG | - | chr5.1:7920979-7920998 | MS.gene20302:intron | 25.0% |
| ! | TAAACTGATGTGTTCAAAAA+TGG | + | chr5.1:7919762-7919781 | None:intergenic | 25.0% |
| ! | TAACATCATGCTACATATTT+GGG | + | chr5.1:7920585-7920604 | None:intergenic | 25.0% |
| ! | TAGTACCAAATATCATATTG+TGG | + | chr5.1:7921091-7921110 | None:intergenic | 25.0% |
| ! | TATACGATAAATAGGAATCA+GGG | - | chr5.1:7918943-7918962 | MS.gene20302:intron | 25.0% |
| ! | TATCAGGTTATCAAACAAAT+AGG | - | chr5.1:7920612-7920631 | MS.gene20302:intron | 25.0% |
| ! | TATTAAATAGGAAGAGGTTA+AGG | - | chr5.1:7919534-7919553 | MS.gene20302:intron | 25.0% |
| ! | TATTTGCAAAGATATCAGTT+TGG | - | chr5.1:7919932-7919951 | MS.gene20302:intron | 25.0% |
| ! | TGGTACTATTGTCAAATAAT+GGG | - | chr5.1:7921103-7921122 | MS.gene20302:intron | 25.0% |
| ! | TGGTAGATTGACTATTAAAT+AGG | - | chr5.1:7919522-7919541 | MS.gene20302:intron | 25.0% |
| ! | TTGGTACTATTGTCAAATAA+TGG | - | chr5.1:7921102-7921121 | MS.gene20302:intron | 25.0% |
| ! | TTGTTCCACAATATGATATT+TGG | - | chr5.1:7921083-7921102 | MS.gene20302:intron | 25.0% |
| ! | TTTCAACATATAAAAACACC+AGG | + | chr5.1:7922107-7922126 | None:intergenic | 25.0% |
| !! | ATTTGTTTGATAACCTGATA+AGG | + | chr5.1:7920612-7920631 | None:intergenic | 25.0% |
| !! | CTCAATTTTCAACAGAAAAA+AGG | + | chr5.1:7922383-7922402 | None:intergenic | 25.0% |
| !! | CTGTATAATACCAATTTTCA+CGG | - | chr5.1:7920322-7920341 | MS.gene20302:intron | 25.0% |
| !! | GATCTATTGTATTTGTCTTT+TGG | - | chr5.1:7922430-7922449 | MS.gene20302:intron | 25.0% |
| !! | TAGCACTTAATTTCAGTTTT+AGG | - | chr5.1:7918323-7918342 | MS.gene20302:intron | 25.0% |
| !! | TATTGCATGTATTTTATCTG+AGG | - | chr5.1:7920683-7920702 | MS.gene20302:intron | 25.0% |
| !! | TGTATAATACCAATTTTCAC+GGG | - | chr5.1:7920323-7920342 | MS.gene20302:intron | 25.0% |
| !! | TTTTGAACACATCAGTTTAT+AGG | - | chr5.1:7919763-7919782 | MS.gene20302:intron | 25.0% |
| !!! | ATTTTTTGTTGAATAGGTTC+TGG | - | chr5.1:7917849-7917868 | MS.gene20302:CDS | 25.0% |
| AACATCATGCTACATATTTG+GGG | + | chr5.1:7920584-7920603 | None:intergenic | 30.0% | |
| AACTTAAACATCATTTGGCA+GGG | - | chr5.1:7920446-7920465 | MS.gene20302:intron | 30.0% | |
| AAGATGGTACTGTATAGATT+AGG | - | chr5.1:7921265-7921284 | MS.gene20302:intron | 30.0% | |
| AAGCAGATTAATGCAATCAA+AGG | + | chr5.1:7918291-7918310 | None:intergenic | 30.0% | |
| AATAAAGTTATGGGATCTTG+GGG | - | chr5.1:7921593-7921612 | MS.gene20302:intron | 30.0% | |
| AATTATTTGATACAGATGGG+AGG | - | chr5.1:7920983-7921002 | MS.gene20302:intron | 30.0% | |
| ACAATAAAGTTATGGGATCT+TGG | - | chr5.1:7921591-7921610 | MS.gene20302:intron | 30.0% | |
| ACATATAAAAACACCAGGAA+AGG | + | chr5.1:7922102-7922121 | None:intergenic | 30.0% | |
| AGAGCAATAAAGGATTAAAG+TGG | - | chr5.1:7922756-7922775 | MS.gene20302:intron | 30.0% | |
| AGATGGAGTTATCTCTTATA+GGG | - | chr5.1:7918483-7918502 | MS.gene20302:intron | 30.0% | |
| AGATTTGTCAGTATAGATGA+TGG | - | chr5.1:7920791-7920810 | MS.gene20302:intron | 30.0% | |
| ATGTGTTCAAAAATGGGATT+TGG | + | chr5.1:7919755-7919774 | None:intergenic | 30.0% | |
| ATTGTCCATTGTGTATACAA+GGG | - | chr5.1:7920533-7920552 | MS.gene20302:intron | 30.0% | |
| CAATAAAGTTATGGGATCTT+GGG | - | chr5.1:7921592-7921611 | MS.gene20302:intron | 30.0% | |
| CACTGCTAATATCAAAGTTT+CGG | + | chr5.1:7917979-7917998 | None:intergenic | 30.0% | |
| CAGATAGTTAATACATACGT+GGG | - | chr5.1:7918825-7918844 | MS.gene20302:intron | 30.0% | |
| CAGTTTATAGGAACTACAAA+TGG | - | chr5.1:7919775-7919794 | MS.gene20302:intron | 30.0% | |
| CTATACGATAAATAGGAATC+AGG | - | chr5.1:7918942-7918961 | MS.gene20302:intron | 30.0% | |
| CTCTTCAATGAATAATGCAA+AGG | - | chr5.1:7919057-7919076 | MS.gene20302:intron | 30.0% | |
| CTTGATATGCTAAGATTATC+TGG | + | chr5.1:7922586-7922605 | None:intergenic | 30.0% | |
| CTTGATTATCTCACAAAATG+TGG | - | chr5.1:7922257-7922276 | MS.gene20302:CDS | 30.0% | |
| GAAACAAACTTCTTATCTTC+TGG | - | chr5.1:7921678-7921697 | MS.gene20302:intron | 30.0% | |
| GACTTGATATACAGAAATGA+AGG | - | chr5.1:7920415-7920434 | MS.gene20302:intron | 30.0% | |
| GAGAATTAGTTAGGTTACTT+GGG | - | chr5.1:7920091-7920110 | MS.gene20302:intron | 30.0% | |
| GATCCCGTTAAAAAAAATAC+AGG | - | chr5.1:7921316-7921335 | MS.gene20302:intron | 30.0% | |
| GATGATTAGAAGGATTCATT+AGG | - | chr5.1:7918891-7918910 | MS.gene20302:intron | 30.0% | |
| GATTATAATAGACCAGGTTT+CGG | - | chr5.1:7920822-7920841 | MS.gene20302:intron | 30.0% | |
| GCACATTAGAAGGAAAAAAT+TGG | - | chr5.1:7919326-7919345 | MS.gene20302:intron | 30.0% | |
| GGTAGTTCAGTGTTAAATAA+CGG | - | chr5.1:7921009-7921028 | MS.gene20302:intron | 30.0% | |
| GTATAGATTAGGATCTAAGT+AGG | - | chr5.1:7921276-7921295 | MS.gene20302:intron | 30.0% | |
| GTTTGTTTCATACACAATAG+CGG | + | chr5.1:7921667-7921686 | None:intergenic | 30.0% | |
| TACAGCAACAACATTTACAA+GGG | + | chr5.1:7918531-7918550 | None:intergenic | 30.0% | |
| TAGTTGAGCATAACTATGTT+CGG | + | chr5.1:7922048-7922067 | None:intergenic | 30.0% | |
| TATCAGTTTGGACTTCATTA+AGG | - | chr5.1:7919944-7919963 | MS.gene20302:intron | 30.0% | |
| TCAAAATGCATGAGCTTATT+AGG | - | chr5.1:7918420-7918439 | MS.gene20302:intron | 30.0% | |
| TCAGTGTTAAATAACGGTTA+TGG | - | chr5.1:7921015-7921034 | MS.gene20302:intron | 30.0% | |
| TCCCTCTTTGATTATAGAAA+TGG | + | chr5.1:7918084-7918103 | None:intergenic | 30.0% | |
| TCTTAACAGCCAGAATAAAA+GGG | + | chr5.1:7922739-7922758 | None:intergenic | 30.0% | |
| TGAGAATTAGTTAGGTTACT+TGG | - | chr5.1:7920090-7920109 | MS.gene20302:intron | 30.0% | |
| TGATCTGATTATAATAGACC+AGG | - | chr5.1:7920816-7920835 | MS.gene20302:intron | 30.0% | |
| TGCATTAAAATGCTCCTATT+TGG | - | chr5.1:7920041-7920060 | MS.gene20302:intron | 30.0% | |
| TGGGTAATCAGCTTAATTAA+GGG | - | chr5.1:7918019-7918038 | MS.gene20302:intron | 30.0% | |
| TGTGTTCAAAAATGGGATTT+GGG | + | chr5.1:7919754-7919773 | None:intergenic | 30.0% | |
| TTACAGCAACAACATTTACA+AGG | + | chr5.1:7918532-7918551 | None:intergenic | 30.0% | |
| TTATAGGAACTACAAATGGT+TGG | - | chr5.1:7919779-7919798 | MS.gene20302:intron | 30.0% | |
| TTATATCCAGTATCACTGAT+TGG | - | chr5.1:7919579-7919598 | MS.gene20302:intron | 30.0% | |
| TTATCTGAATTCGTGAAACT+TGG | - | chr5.1:7922509-7922528 | MS.gene20302:intron | 30.0% | |
| TTGGGTAATCAGCTTAATTA+AGG | - | chr5.1:7918018-7918037 | MS.gene20302:intron | 30.0% | |
| ! | ATGAAGTTTTCTATCTCTCA+AGG | - | chr5.1:7921491-7921510 | MS.gene20302:intron | 30.0% |
| ! | CAATTCTGAAAAGTCTTGAT+TGG | - | chr5.1:7922330-7922349 | MS.gene20302:intron | 30.0% |
| ! | GAGAGATTTTCAATACATAC+AGG | - | chr5.1:7920178-7920197 | MS.gene20302:intron | 30.0% |
| ! | GATTATAATAGACCAGGTTT+TGG | - | chr5.1:7920822-7920841 | MS.gene20302:intron | 30.0% |
| ! | TATAGCGGAAATGAGAATTA+GGG | + | chr5.1:7919666-7919685 | None:intergenic | 30.0% |
| ! | TCCAATTTTTATTACTCCCT+CGG | - | chr5.1:7919107-7919126 | MS.gene20302:CDS | 30.0% |
| ! | TGAAGTTTTCTATCTCTCAA+GGG | - | chr5.1:7921492-7921511 | MS.gene20302:intron | 30.0% |
| ! | TTGTTTGTGTTAGTCTGTTA+GGG | - | chr5.1:7918723-7918742 | MS.gene20302:intron | 30.0% |
| ! | TTTGTTTGTGTTAGTCTGTT+AGG | - | chr5.1:7918722-7918741 | MS.gene20302:intron | 30.0% |
| ! | TTTTTGCGTGAGAATTAGTT+AGG | - | chr5.1:7920082-7920101 | MS.gene20302:intron | 30.0% |
| !! | TTAACGAAATCGATTTGTAC+AGG | + | chr5.1:7922167-7922186 | None:intergenic | 30.0% |
| !! | TTGCAAATAGCTTTAGGAAT+AGG | + | chr5.1:7919921-7919940 | None:intergenic | 30.0% |
| !!! | ATGCATTTTTTCTCTTTAGC+TGG | - | chr5.1:7922480-7922499 | MS.gene20302:intron | 30.0% |
| !!! | CAGTTTTTTTAGCAGTTAGA+AGG | - | chr5.1:7921205-7921224 | MS.gene20302:intron | 30.0% |
| !!! | TTCTCTACGCTTTTTCATAT+AGG | + | chr5.1:7922139-7922158 | None:intergenic | 30.0% |
| !!! | TTTCAGTTTTAGGTTGTCTT+TGG | - | chr5.1:7918333-7918352 | MS.gene20302:intron | 30.0% |
| ACAAAGTCATAGTTGCAAGA+TGG | - | chr5.1:7921249-7921268 | MS.gene20302:intron | 35.0% | |
| AGTTGAGCATAACTATGTTC+GGG | + | chr5.1:7922047-7922066 | None:intergenic | 35.0% | |
| ATAAAGTTATGGGATCTTGG+GGG | - | chr5.1:7921594-7921613 | MS.gene20302:intron | 35.0% | |
| ATCTGTTCTTATCTGATTGC+AGG | - | chr5.1:7921530-7921549 | MS.gene20302:intron | 35.0% | |
| ATTGAGTGGTATCCCTTTAT+TGG | - | chr5.1:7922639-7922658 | MS.gene20302:intron | 35.0% | |
| CAACTTAAACATCATTTGGC+AGG | - | chr5.1:7920445-7920464 | MS.gene20302:intron | 35.0% | |
| CAGCTTAATTAAGGGCTTAT+TGG | - | chr5.1:7918027-7918046 | MS.gene20302:intron | 35.0% | |
| CATTGTCCATTGTGTATACA+AGG | - | chr5.1:7920532-7920551 | MS.gene20302:intron | 35.0% | |
| CCACGTATGTATTAACTATC+TGG | + | chr5.1:7918827-7918846 | None:intergenic | 35.0% | |
| CCAGATAGTTAATACATACG+TGG | - | chr5.1:7918824-7918843 | MS.gene20302:intron | 35.0% | |
| CGGTCAAACTGTATTTATGT+AGG | - | chr5.1:7918107-7918126 | MS.gene20302:CDS | 35.0% | |
| CTATAATCAAAGAGGGAATG+CGG | - | chr5.1:7918087-7918106 | MS.gene20302:CDS | 35.0% | |
| CTCTTAACAGCCAGAATAAA+AGG | + | chr5.1:7922740-7922759 | None:intergenic | 35.0% | |
| CTGGATATAAGATCAAGAGA+TGG | + | chr5.1:7919569-7919588 | None:intergenic | 35.0% | |
| CTTGTATACACAATGGACAA+TGG | + | chr5.1:7920534-7920553 | None:intergenic | 35.0% | |
| GAGATGGAGTTATCTCTTAT+AGG | - | chr5.1:7918482-7918501 | MS.gene20302:intron | 35.0% | |
| GCACTTGGAAGAACTTATTT+AGG | + | chr5.1:7918229-7918248 | None:intergenic | 35.0% | |
| GCTAGCACAGTAATTAGTAA+TGG | + | chr5.1:7919838-7919857 | None:intergenic | 35.0% | |
| GCTATAGCAATGTATCATAG+CGG | - | chr5.1:7921042-7921061 | MS.gene20302:intron | 35.0% | |
| GTGTTAAATAACGGTTATGG+CGG | - | chr5.1:7921018-7921037 | MS.gene20302:intron | 35.0% | |
| TAAAGGATTAAAGTGGTCCT+AGG | - | chr5.1:7922763-7922782 | MS.gene20302:intron | 35.0% | |
| TATACGAGAAGTAAGAGTAG+TGG | - | chr5.1:7918793-7918812 | MS.gene20302:intron | 35.0% | |
| TATTAGCATCAAGCAGCTTA+TGG | - | chr5.1:7919304-7919323 | MS.gene20302:intron | 35.0% | |
| TGATGCTAATATTCTACCGT+TGG | + | chr5.1:7919295-7919314 | None:intergenic | 35.0% | |
| TGTTATCTACTGACATCAAG+AGG | - | chr5.1:7920737-7920756 | MS.gene20302:intron | 35.0% | |
| TGTTTCCCAACACCAATAAA+GGG | + | chr5.1:7922654-7922673 | None:intergenic | 35.0% | |
| TTAGAAGGAAAAAATTGGGC+TGG | - | chr5.1:7919331-7919350 | MS.gene20302:intron | 35.0% | |
| TTGTTTCCCAACACCAATAA+AGG | + | chr5.1:7922655-7922674 | None:intergenic | 35.0% | |
| ! | AAGGTAAAATCTGGTAGTGA+TGG | + | chr5.1:7921979-7921998 | None:intergenic | 35.0% |
| ! | ACTTAATGCACTGACAAGTA+TGG | + | chr5.1:7919863-7919882 | None:intergenic | 35.0% |
| ! | AGTAGTTCTGCTGTGTAATA+AGG | - | chr5.1:7921341-7921360 | MS.gene20302:intron | 35.0% |
| ! | ATTTTATCTGAGGAAGGTCT+TGG | - | chr5.1:7920693-7920712 | MS.gene20302:intron | 35.0% |
| ! | CAAGACTTTTCAGAATTGAG+CGG | + | chr5.1:7922328-7922347 | None:intergenic | 35.0% |
| ! | CTGTTAGGGTATTAGCAAAT+GGG | - | chr5.1:7918737-7918756 | MS.gene20302:intron | 35.0% |
| ! | GCATGTATTTTATCTGAGGA+AGG | - | chr5.1:7920687-7920706 | MS.gene20302:intron | 35.0% |
| ! | GTATAGCGGAAATGAGAATT+AGG | + | chr5.1:7919667-7919686 | None:intergenic | 35.0% |
| ! | TCTGTTAGGGTATTAGCAAA+TGG | - | chr5.1:7918736-7918755 | MS.gene20302:intron | 35.0% |
| ! | TGTTAGGGTATTAGCAAATG+GGG | - | chr5.1:7918738-7918757 | MS.gene20302:intron | 35.0% |
| ! | TTCGGTGTAGATATTCTACA+GGG | - | chr5.1:7920871-7920890 | MS.gene20302:intron | 35.0% |
| ! | TTTCGGTGTAGATATTCTAC+AGG | - | chr5.1:7920870-7920889 | MS.gene20302:intron | 35.0% |
| ! | TTTTATCTGAGGAAGGTCTT+GGG | - | chr5.1:7920694-7920713 | MS.gene20302:intron | 35.0% |
| !! | AGTTTGTTATTGTGGTAGTC+AGG | - | chr5.1:7918862-7918881 | MS.gene20302:intron | 35.0% |
| !! | ATAGCTTTAGGAATAGGAAG+AGG | + | chr5.1:7919915-7919934 | None:intergenic | 35.0% |
| !! | TTATATTGCTTTTAGACCGG+TGG | - | chr5.1:7918627-7918646 | MS.gene20302:intron | 35.0% |
| !! | TTTTGAAGGTGCATACAAGA+AGG | - | chr5.1:7920938-7920957 | MS.gene20302:intron | 35.0% |
| !!! | CTAGGTTTTGGCTAAAAAAG+TGG | - | chr5.1:7919478-7919497 | MS.gene20302:intron | 35.0% |
| AAACAAGATTGACAAGGCAG+GGG | - | chr5.1:7922669-7922688 | MS.gene20302:intron | 40.0% | |
| AAAGGGATACCACTCAATGA+TGG | + | chr5.1:7922637-7922656 | None:intergenic | 40.0% | |
| AAAGTGATCCACTTAGCACA+GGG | + | chr5.1:7918398-7918417 | None:intergenic | 40.0% | |
| AAGTCTGCCAAGTGTTAATC+CGG | + | chr5.1:7919256-7919275 | None:intergenic | 40.0% | |
| AAGTTCAAGACAACCAACTG+AGG | + | chr5.1:7919035-7919054 | None:intergenic | 40.0% | |
| AATCAGATCAGACCAAAACC+TGG | + | chr5.1:7920837-7920856 | None:intergenic | 40.0% | |
| AATGAGAATTAGGGTCCTTC+TGG | + | chr5.1:7919657-7919676 | None:intergenic | 40.0% | |
| ACAAAGACAACGCTCAAAGA+AGG | + | chr5.1:7922192-7922211 | None:intergenic | 40.0% | |
| ACAGGGTTAATGTTAGTGAC+AGG | - | chr5.1:7920888-7920907 | MS.gene20302:intron | 40.0% | |
| ACCACATAAACCACCTTGAA+TGG | + | chr5.1:7920364-7920383 | None:intergenic | 40.0% | |
| ACCATTCAAGGTGGTTTATG+TGG | - | chr5.1:7920360-7920379 | MS.gene20302:intron | 40.0% | |
| ACGATAAATAGGAATCAGGG+AGG | - | chr5.1:7918946-7918965 | MS.gene20302:intron | 40.0% | |
| ACGATATGATACCATACTGG+TGG | - | chr5.1:7919980-7919999 | MS.gene20302:intron | 40.0% | |
| ACGCGTATCTTACATTTGGT+CGG | + | chr5.1:7922716-7922735 | None:intergenic | 40.0% | |
| AGAATATCTACACCGAAACC+TGG | + | chr5.1:7920868-7920887 | None:intergenic | 40.0% | |
| AGCATCAACAACATAACTGC+AGG | + | chr5.1:7922557-7922576 | None:intergenic | 40.0% | |
| AGGACTGTTGAATCAGACAT+TGG | - | chr5.1:7920228-7920247 | MS.gene20302:intron | 40.0% | |
| AGTCAACCAATCAGTGATAC+TGG | + | chr5.1:7919588-7919607 | None:intergenic | 40.0% | |
| AGTTCAAGACAACCAACTGA+GGG | + | chr5.1:7919034-7919053 | None:intergenic | 40.0% | |
| ATTTCACTTCAGAGCAGCAA+AGG | - | chr5.1:7920266-7920285 | MS.gene20302:intron | 40.0% | |
| CAAGACCTTGAGAAAAACTC+TGG | - | chr5.1:7919624-7919643 | MS.gene20302:intron | 40.0% | |
| CAGGACTTAGGATGATTAGA+AGG | - | chr5.1:7918881-7918900 | MS.gene20302:intron | 40.0% | |
| CATAACACCGGATTAACACT+TGG | - | chr5.1:7919246-7919265 | MS.gene20302:intron | 40.0% | |
| CCAACGATATGATACCATAC+TGG | - | chr5.1:7919977-7919996 | MS.gene20302:intron | 40.0% | |
| CCAGTATGGTATCATATCGT+TGG | + | chr5.1:7919980-7919999 | None:intergenic | 40.0% | |
| CCATTGTGTATACAAGGGAT+AGG | - | chr5.1:7920538-7920557 | MS.gene20302:intron | 40.0% | |
| CCTATCCCTTGTATACACAA+TGG | + | chr5.1:7920541-7920560 | None:intergenic | 40.0% | |
| CGTGAAGCATAACTTACTGT+AGG | + | chr5.1:7918672-7918691 | None:intergenic | 40.0% | |
| CTACAAATGGTTGGCACATT+TGG | - | chr5.1:7919788-7919807 | MS.gene20302:intron | 40.0% | |
| CTCCTATTTGGAAAGAGTTG+TGG | - | chr5.1:7920053-7920072 | MS.gene20302:intron | 40.0% | |
| CTGGCTGTTAAGAGCAATAA+AGG | - | chr5.1:7922746-7922765 | MS.gene20302:intron | 40.0% | |
| GAAACAAGATTGACAAGGCA+GGG | - | chr5.1:7922668-7922687 | MS.gene20302:intron | 40.0% | |
| GAAACCATCGACAACTCTTA+AGG | - | chr5.1:7919371-7919390 | MS.gene20302:intron | 40.0% | |
| GCCGAGGGAGTAATAAAAAT+TGG | + | chr5.1:7919111-7919130 | None:intergenic | 40.0% | |
| GGACTTCATTAAGGTTGTTG+AGG | - | chr5.1:7919953-7919972 | MS.gene20302:intron | 40.0% | |
| GTAGGATTCGAGAACAGAAA+CGG | - | chr5.1:7921294-7921313 | MS.gene20302:intron | 40.0% | |
| GTCAATAACAGAGTCGATGT+TGG | + | chr5.1:7922948-7922967 | None:intergenic | 40.0% | |
| GTTCTTATCTGATTGCAGGT+GGG | - | chr5.1:7921534-7921553 | MS.gene20302:intron | 40.0% | |
| GTTGGGAAACAAGATTGACA+AGG | - | chr5.1:7922663-7922682 | MS.gene20302:intron | 40.0% | |
| TAAAGTTATGGGATCTTGGG+GGG | - | chr5.1:7921595-7921614 | MS.gene20302:intron | 40.0% | |
| TATTGTGGTAGTCAGGACTT+AGG | - | chr5.1:7918869-7918888 | MS.gene20302:intron | 40.0% | |
| TCAATCTACCACCTTGTTAG+AGG | + | chr5.1:7919513-7919532 | None:intergenic | 40.0% | |
| TCATGAGCATGAGCAAATTC+TGG | - | chr5.1:7920152-7920171 | MS.gene20302:intron | 40.0% | |
| TGAAAATTGAGATGCTGCCA+AGG | - | chr5.1:7922392-7922411 | MS.gene20302:intron | 40.0% | |
| TGATGCACTTGAACCATCAA+TGG | - | chr5.1:7919192-7919211 | MS.gene20302:CDS | 40.0% | |
| TGCCACAACTCTTTCCAAAT+AGG | + | chr5.1:7920058-7920077 | None:intergenic | 40.0% | |
| TGGTATCCCTTTATTGGTGT+TGG | - | chr5.1:7922645-7922664 | MS.gene20302:intron | 40.0% | |
| TGTGTGTGTGTGTTTCACAT+AGG | - | chr5.1:7921734-7921753 | MS.gene20302:intron | 40.0% | |
| TGTTCTTATCTGATTGCAGG+TGG | - | chr5.1:7921533-7921552 | MS.gene20302:intron | 40.0% | |
| TTAATGTTAGTGACAGGCAG+TGG | - | chr5.1:7920894-7920913 | MS.gene20302:intron | 40.0% | |
| TTCCGCTATACTAATGAGCA+GGG | - | chr5.1:7919676-7919695 | MS.gene20302:intron | 40.0% | |
| TTGATGGAGTATACGACCAA+CGG | - | chr5.1:7919276-7919295 | MS.gene20302:intron | 40.0% | |
| TTTATCTGAGGAAGGTCTTG+GGG | - | chr5.1:7920695-7920714 | MS.gene20302:intron | 40.0% | |
| TTTCACTTCAGAGCAGCAAA+GGG | - | chr5.1:7920267-7920286 | MS.gene20302:intron | 40.0% | |
| TTTCCGCTATACTAATGAGC+AGG | - | chr5.1:7919675-7919694 | MS.gene20302:intron | 40.0% | |
| TTTGATACAGATGGGAGGAA+CGG | - | chr5.1:7920988-7921007 | MS.gene20302:intron | 40.0% | |
| ! | AACACTTGGCAGACTTTTGA+TGG | - | chr5.1:7919260-7919279 | MS.gene20302:intron | 40.0% |
| ! | ACACTGACTACTTCCATTGA+TGG | + | chr5.1:7919208-7919227 | None:intergenic | 40.0% |
| ! | ATGATGTTATGGGCCTTATC+AGG | - | chr5.1:7920596-7920615 | MS.gene20302:intron | 40.0% |
| ! | GAGAAGTAAGAGTAGTGGAA+AGG | - | chr5.1:7918798-7918817 | MS.gene20302:intron | 40.0% |
| ! | GGTATCCCTTTATTGGTGTT+GGG | - | chr5.1:7922646-7922665 | MS.gene20302:intron | 40.0% |
| ! | GTCATCCAGAGTTTTTCTCA+AGG | + | chr5.1:7919632-7919651 | None:intergenic | 40.0% |
| ! | TATCACTGATTGGTTGACTG+AGG | - | chr5.1:7919589-7919608 | MS.gene20302:intron | 40.0% |
| ! | TCTTTGAGCGTTGTCTTTGT+CGG | - | chr5.1:7922192-7922211 | MS.gene20302:intron | 40.0% |
| ! | TGTGTTTCACATAGGAGCAT+TGG | - | chr5.1:7921742-7921761 | MS.gene20302:intron | 40.0% |
| !! | ACATCGACTCTGTTATTGAC+TGG | - | chr5.1:7922948-7922967 | MS.gene20302:intron | 40.0% |
| !! | ATTAGCAGTGTCGACGTATT+AGG | - | chr5.1:7917989-7918008 | MS.gene20302:intron | 40.0% |
| !! | TTAGCAGTGTCGACGTATTA+GGG | - | chr5.1:7917990-7918009 | MS.gene20302:intron | 40.0% |
| !!! | GGAAAAAATTGGGCTGGTTT+TGG | - | chr5.1:7919337-7919356 | MS.gene20302:intron | 40.0% |
| AAACCTGCTAGCATCCAAGA+AGG | - | chr5.1:7920508-7920527 | MS.gene20302:intron | 45.0% | |
| AAATGGGGCAGTAGTAAGGA+GGG | - | chr5.1:7918753-7918772 | MS.gene20302:intron | 45.0% | |
| AACCACTAATTGTGAAGCCG+AGG | + | chr5.1:7919127-7919146 | None:intergenic | 45.0% | |
| AACGTTCCTGCTGTGTAACA+AGG | - | chr5.1:7919001-7919020 | MS.gene20302:intron | 45.0% | |
| AACTCTGGATGACTTCCAGA+AGG | - | chr5.1:7919639-7919658 | MS.gene20302:intron | 45.0% | |
| ACAATGGACAATGGCCTTCT+TGG | + | chr5.1:7920525-7920544 | None:intergenic | 45.0% | |
| ACCACTAATTGTGAAGCCGA+GGG | + | chr5.1:7919126-7919145 | None:intergenic | 45.0% | |
| ACGTTCCTGCTGTGTAACAA+GGG | - | chr5.1:7919002-7919021 | MS.gene20302:intron | 45.0% | |
| AGCAGGTTGTACACCATTCA+AGG | - | chr5.1:7920348-7920367 | MS.gene20302:intron | 45.0% | |
| AGGAATCAGGGAGGACAAAA+AGG | - | chr5.1:7918955-7918974 | MS.gene20302:intron | 45.0% | |
| AGGGACGCGTATCTTACATT+TGG | + | chr5.1:7922720-7922739 | None:intergenic | 45.0% | |
| AGGTGAATTTGATGCTGCTC+AGG | + | chr5.1:7920663-7920682 | None:intergenic | 45.0% | |
| AGGTGCATACAAGAAGGTAG+AGG | - | chr5.1:7920944-7920963 | MS.gene20302:intron | 45.0% | |
| AGGTTGTACACCATTCAAGG+TGG | - | chr5.1:7920351-7920370 | MS.gene20302:intron | 45.0% | |
| AGTAACGTTCCCACATGCTA+CGG | + | chr5.1:7921632-7921651 | None:intergenic | 45.0% | |
| ATACCATACTGGTGGTTGAC+TGG | - | chr5.1:7919988-7920007 | MS.gene20302:intron | 45.0% | |
| ATGCAACCACAAACTTCTGC+AGG | + | chr5.1:7920393-7920412 | None:intergenic | 45.0% | |
| ATTGCTCACCTCTAACAAGG+TGG | - | chr5.1:7919502-7919521 | MS.gene20302:intron | 45.0% | |
| ATTGGTTGACTGAGGAGTTC+AGG | - | chr5.1:7919597-7919616 | MS.gene20302:intron | 45.0% | |
| CCATCCTTAAGAGTTGTCGA+TGG | + | chr5.1:7919378-7919397 | None:intergenic | 45.0% | |
| CCATCGACAACTCTTAAGGA+TGG | - | chr5.1:7919375-7919394 | MS.gene20302:intron | 45.0% | |
| CCATCTCCTGCTTGAAGAAA+AGG | + | chr5.1:7918469-7918488 | None:intergenic | 45.0% | |
| CGACGTATTAGGGTGAGTTT+GGG | - | chr5.1:7918000-7918019 | MS.gene20302:intron | 45.0% | |
| CTTATAGGGCTTCAGAATGC+TGG | - | chr5.1:7918497-7918516 | MS.gene20302:intron | 45.0% | |
| GAAAGTGATCCACTTAGCAC+AGG | + | chr5.1:7918399-7918418 | None:intergenic | 45.0% | |
| GAAGACACTGGATAACATGG+AGG | - | chr5.1:7919162-7919181 | MS.gene20302:CDS | 45.0% | |
| GATTTCCCTTGTTACACAGC+AGG | + | chr5.1:7919010-7919029 | None:intergenic | 45.0% | |
| GCAGCTTATGGCACATTAGA+AGG | - | chr5.1:7919316-7919335 | MS.gene20302:intron | 45.0% | |
| GCTGAAGACACTGGATAACA+TGG | - | chr5.1:7919159-7919178 | MS.gene20302:CDS | 45.0% | |
| GGAAACAAGATTGACAAGGC+AGG | - | chr5.1:7922667-7922686 | MS.gene20302:intron | 45.0% | |
| GGAATCAGGGAGGACAAAAA+GGG | - | chr5.1:7918956-7918975 | MS.gene20302:intron | 45.0% | |
| GGAATTGCTCACCTCTAACA+AGG | - | chr5.1:7919499-7919518 | MS.gene20302:intron | 45.0% | |
| GGTGGCTAACAACATAACAC+CGG | - | chr5.1:7919234-7919253 | MS.gene20302:intron | 45.0% | |
| GTAAGGAGGGAAGGATTTGA+AGG | - | chr5.1:7918766-7918785 | MS.gene20302:intron | 45.0% | |
| TACAAGAAGGTAGAGGTTGC+TGG | - | chr5.1:7920951-7920970 | MS.gene20302:intron | 45.0% | |
| TAGCAAATGGGGCAGTAGTA+AGG | - | chr5.1:7918749-7918768 | MS.gene20302:intron | 45.0% | |
| TATTGCCTAGCAATCGACTG+AGG | - | chr5.1:7921880-7921899 | MS.gene20302:intron | 45.0% | |
| TCCCCTGCTCATTAGTATAG+CGG | + | chr5.1:7919681-7919700 | None:intergenic | 45.0% | |
| TCCGCTATACTAATGAGCAG+GGG | - | chr5.1:7919677-7919696 | MS.gene20302:intron | 45.0% | |
| TCGACGTATTAGGGTGAGTT+TGG | - | chr5.1:7917999-7918018 | MS.gene20302:intron | 45.0% | |
| TCTAAGAGGCAGAGAATCCT+TGG | + | chr5.1:7922412-7922431 | None:intergenic | 45.0% | |
| TGCAGGTGGGATTCAATATG+AGG | - | chr5.1:7921547-7921566 | MS.gene20302:intron | 45.0% | |
| TTAGCACAGGGCATGCATAT+AGG | + | chr5.1:7918386-7918405 | None:intergenic | 45.0% | |
| TTATCCAGTGTCTTCAGCTC+AGG | + | chr5.1:7919157-7919176 | None:intergenic | 45.0% | |
| TTCTTCCAAGTGCACCCTTA+GGG | - | chr5.1:7918236-7918255 | MS.gene20302:intron | 45.0% | |
| TTTGGGAATCCAAGCACAAG+AGG | + | chr5.1:7919737-7919756 | None:intergenic | 45.0% | |
| ! | CAATCACGGACTGCAGAAAA+TGG | + | chr5.1:7921165-7921184 | None:intergenic | 45.0% |
| ! | CCTTTTCTTCAAGCAGGAGA+TGG | - | chr5.1:7918466-7918485 | MS.gene20302:intron | 45.0% |
| ! | CTTTGAGCGTTGTCTTTGTC+GGG | - | chr5.1:7922193-7922212 | MS.gene20302:intron | 45.0% |
| ! | CTTTTCTGAACTGGTTACGC+AGG | - | chr5.1:7917796-7917815 | MS.gene20302:CDS | 45.0% |
| ! | GATACGCGTCCCTTTTATTC+TGG | - | chr5.1:7922727-7922746 | MS.gene20302:intron | 45.0% |
| ! | GATGGATCAATTGCCACTTG+AGG | - | chr5.1:7919393-7919412 | MS.gene20302:intron | 45.0% |
| ! | GCAATGGTGAAGCTAGGTTT+TGG | - | chr5.1:7919466-7919485 | MS.gene20302:intron | 45.0% |
| ! | GTGGTTGACTGGTTGTTTAC+AGG | - | chr5.1:7919999-7920018 | MS.gene20302:intron | 45.0% |
| ! | TCAATTGCCACTTGAGGACA+AGG | - | chr5.1:7919399-7919418 | MS.gene20302:intron | 45.0% |
| ! | TGTGGGAAGCTTTTCTGAAC+TGG | - | chr5.1:7917787-7917806 | MS.gene20302:CDS | 45.0% |
| ! | TTGCAGCCTTTTCTTCAAGC+AGG | - | chr5.1:7918460-7918479 | MS.gene20302:intron | 45.0% |
| ! | TTTATCCCTAAGGGTGCACT+TGG | + | chr5.1:7918244-7918263 | None:intergenic | 45.0% |
| ! | TTTTCCTGAGCTGAAGACAC+TGG | - | chr5.1:7919150-7919169 | MS.gene20302:CDS | 45.0% |
| !! | ACATTTGGTGCAGTGGTTAG+GGG | - | chr5.1:7919803-7919822 | MS.gene20302:intron | 45.0% |
| !! | AGGGTACAGTTCTAAGTGAC+AGG | - | chr5.1:7918911-7918930 | MS.gene20302:intron | 45.0% |
| !! | CACATTTGGTGCAGTGGTTA+GGG | - | chr5.1:7919802-7919821 | MS.gene20302:intron | 45.0% |
| !! | GTTTGGTTCTAAGTGCTCTC+TGG | - | chr5.1:7922852-7922871 | MS.gene20302:intron | 45.0% |
| AACCTAGGTTCCGTAGCATG+TGG | - | chr5.1:7921619-7921638 | MS.gene20302:intron | 50.0% | |
| AATGGTCAGGGATCTCTGAG+CGG | - | chr5.1:7919444-7919463 | MS.gene20302:intron | 50.0% | |
| ACAGACACTCTGCCCAAGTA+AGG | + | chr5.1:7920306-7920325 | None:intergenic | 50.0% | |
| ACCTAGGTTCCGTAGCATGT+GGG | - | chr5.1:7921620-7921639 | MS.gene20302:intron | 50.0% | |
| ACCTGCTGTCCCGTGAAAAT+TGG | + | chr5.1:7920335-7920354 | None:intergenic | 50.0% | |
| AGAAGGTAGAGGTTGCTGGA+AGG | - | chr5.1:7920955-7920974 | MS.gene20302:intron | 50.0% | |
| AGCCAATGCAGTGCAGAATG+TGG | + | chr5.1:7920768-7920787 | None:intergenic | 50.0% | |
| CAAATGGGGCAGTAGTAAGG+AGG | - | chr5.1:7918752-7918771 | MS.gene20302:intron | 50.0% | |
| CAACCAGTCAACCACCAGTA+TGG | + | chr5.1:7919994-7920013 | None:intergenic | 50.0% | |
| CAAGGGAAATCTCCCTCAGT+TGG | - | chr5.1:7919019-7919038 | MS.gene20302:intron | 50.0% | |
| CAAGGGATAGGACATACGAG+TGG | - | chr5.1:7920550-7920569 | MS.gene20302:intron | 50.0% | |
| CACCACATTCTGCACTGCAT+TGG | - | chr5.1:7920763-7920782 | MS.gene20302:intron | 50.0% | |
| CAGGGGAACTTGCACTACAA+GGG | - | chr5.1:7919694-7919713 | MS.gene20302:intron | 50.0% | |
| CTGAGCAAGCCATCATTGAG+TGG | - | chr5.1:7922625-7922644 | MS.gene20302:intron | 50.0% | |
| GAGCATGAGCAAATTCTGGC+AGG | - | chr5.1:7920156-7920175 | MS.gene20302:intron | 50.0% | |
| GCTGAGTAAAGAGCCTTTCC+TGG | - | chr5.1:7922086-7922105 | MS.gene20302:intron | 50.0% | |
| GGAAAGGCTCTTTACTCAGC+AGG | + | chr5.1:7922086-7922105 | None:intergenic | 50.0% | |
| GGAACTTGCACTACAAGGGT+AGG | - | chr5.1:7919698-7919717 | MS.gene20302:intron | 50.0% | |
| GTTCTTCCAAGTGCACCCTT+AGG | - | chr5.1:7918235-7918254 | MS.gene20302:intron | 50.0% | |
| TATGCATGCCCTGTGCTAAG+TGG | - | chr5.1:7918387-7918406 | MS.gene20302:intron | 50.0% | |
| TCCCTCGGCTTCACAATTAG+TGG | - | chr5.1:7919122-7919141 | MS.gene20302:CDS | 50.0% | |
| TGCACACCTGCAGAAGTTTG+TGG | - | chr5.1:7920384-7920403 | MS.gene20302:intron | 50.0% | |
| TGCTAACAGCCTCTTGTGCT+TGG | - | chr5.1:7919725-7919744 | MS.gene20302:intron | 50.0% | |
| TGCTAGCAGGTTTCGTATGC+TGG | + | chr5.1:7920501-7920520 | None:intergenic | 50.0% | |
| TTGAGGACAAGGATGGCAGA+TGG | - | chr5.1:7919410-7919429 | MS.gene20302:intron | 50.0% | |
| ! | ACCAATTTTCACGGGACAGC+AGG | - | chr5.1:7920331-7920350 | MS.gene20302:intron | 50.0% |
| ! | ATTGACTCTGATGAGCAGGC+AGG | - | chr5.1:7920208-7920227 | MS.gene20302:intron | 50.0% |
| ! | TCACGGACTGCAGAAAATGG+TGG | + | chr5.1:7921162-7921181 | None:intergenic | 50.0% |
| ! | TTGCCACTTGAGGACAAGGA+TGG | - | chr5.1:7919403-7919422 | MS.gene20302:intron | 50.0% |
| !! | CAGAAGGGGGAAGGTTTTGA+AGG | - | chr5.1:7920924-7920943 | MS.gene20302:intron | 50.0% |
| !! | CTGCATTGACTCTGATGAGC+AGG | - | chr5.1:7920204-7920223 | MS.gene20302:intron | 50.0% |
| !! | GCACATTTGGTGCAGTGGTT+AGG | - | chr5.1:7919801-7919820 | MS.gene20302:intron | 50.0% |
| !! | TGGTTCTAAGTGCTCTCTGG+TGG | - | chr5.1:7922855-7922874 | MS.gene20302:intron | 50.0% |
| AGCGTTGTCTTTGTCGGGCA+AGG | - | chr5.1:7922198-7922217 | MS.gene20302:intron | 55.0% | |
| AGGACAAGGATGGCAGATGG+AGG | - | chr5.1:7919413-7919432 | MS.gene20302:intron | 55.0% | |
| AGTAGTCAGTGTCGCAGAGG+TGG | - | chr5.1:7919216-7919235 | MS.gene20302:intron | 55.0% | |
| ATAACACTGCTCCCACCTCC+TGG | + | chr5.1:7920723-7920742 | None:intergenic | 55.0% | |
| CACCACCTCAGTCGATTGCT+AGG | + | chr5.1:7921888-7921907 | None:intergenic | 55.0% | |
| CAGATGGAGGGGAATGGGAA+TGG | - | chr5.1:7919426-7919445 | MS.gene20302:intron | 55.0% | |
| CATGTCCTCGCTGTATCCAC+CGG | + | chr5.1:7918646-7918665 | None:intergenic | 55.0% | |
| CTGCCATCCTTGTCCTCAAG+TGG | + | chr5.1:7919409-7919428 | None:intergenic | 55.0% | |
| GACAAGGATGGCAGATGGAG+GGG | - | chr5.1:7919415-7919434 | MS.gene20302:intron | 55.0% | |
| GAGGGGAATGGGAATGGTCA+GGG | - | chr5.1:7919432-7919451 | MS.gene20302:intron | 55.0% | |
| GATGGCAGATGGAGGGGAAT+GGG | - | chr5.1:7919421-7919440 | MS.gene20302:intron | 55.0% | |
| GCAGGGGAACTTGCACTACA+AGG | - | chr5.1:7919693-7919712 | MS.gene20302:intron | 55.0% | |
| GCAGGTTTCGTATGCTGGTC+TGG | + | chr5.1:7920496-7920515 | None:intergenic | 55.0% | |
| GGAAGAGGTAGCAAGCTTGC+AGG | + | chr5.1:7919900-7919919 | None:intergenic | 55.0% | |
| GGAAGTAGTCAGTGTCGCAG+AGG | - | chr5.1:7919213-7919232 | MS.gene20302:intron | 55.0% | |
| GGACAAGGATGGCAGATGGA+GGG | - | chr5.1:7919414-7919433 | MS.gene20302:intron | 55.0% | |
| GGATAGGACATACGAGTGGC+AGG | - | chr5.1:7920554-7920573 | MS.gene20302:intron | 55.0% | |
| GTGCAGTGGTTAGGGGTGAA+AGG | - | chr5.1:7919810-7919829 | MS.gene20302:intron | 55.0% | |
| GTGGGAACGTTACTGTCGTG+CGG | - | chr5.1:7921638-7921657 | MS.gene20302:intron | 55.0% | |
| TCCCACATGCTACGGAACCT+AGG | + | chr5.1:7921624-7921643 | None:intergenic | 55.0% | |
| TGAGCGGCAATGGTGAAGCT+AGG | - | chr5.1:7919460-7919479 | MS.gene20302:intron | 55.0% | |
| TGCCTAGCAATCGACTGAGG+TGG | - | chr5.1:7921883-7921902 | MS.gene20302:intron | 55.0% | |
| TGGCCTTCTTGGATGCTAGC+AGG | + | chr5.1:7920514-7920533 | None:intergenic | 55.0% | |
| TTAGACCGGTGGATACAGCG+AGG | - | chr5.1:7918638-7918657 | MS.gene20302:intron | 55.0% | |
| ! | AAGTGCTCTCTGGTGGTGCA+GGG | - | chr5.1:7922862-7922881 | MS.gene20302:intron | 55.0% |
| ! | TAAGTGCTCTCTGGTGGTGC+AGG | - | chr5.1:7922861-7922880 | MS.gene20302:intron | 55.0% |
| !! | GGTTGGCACATTTGGTGCAG+TGG | - | chr5.1:7919796-7919815 | MS.gene20302:intron | 55.0% |
| AGGCAGTGGCAGCAGTCAGA+AGG | - | chr5.1:7920908-7920927 | MS.gene20302:intron | 60.0% | |
| CAGGGATCTCTGAGCGGCAA+TGG | - | chr5.1:7919450-7919469 | MS.gene20302:intron | 60.0% | |
| CAGTGGCAGCAGTCAGAAGG+GGG | - | chr5.1:7920911-7920930 | MS.gene20302:intron | 60.0% | |
| GCAGTGGCAGCAGTCAGAAG+GGG | - | chr5.1:7920910-7920929 | MS.gene20302:intron | 60.0% | |
| GGAGGGGAATGGGAATGGTC+AGG | - | chr5.1:7919431-7919450 | MS.gene20302:intron | 60.0% | |
| GGATGGCAGATGGAGGGGAA+TGG | - | chr5.1:7919420-7919439 | MS.gene20302:intron | 60.0% | |
| GGCAGTGGCAGCAGTCAGAA+GGG | - | chr5.1:7920909-7920928 | MS.gene20302:intron | 60.0% | |
| GGGGCAGTAGTAAGGAGGGA+AGG | - | chr5.1:7918757-7918776 | MS.gene20302:intron | 60.0% | |
| GGCAGCAGTCAGAAGGGGGA+AGG | - | chr5.1:7920915-7920934 | MS.gene20302:intron | 65.0% | |
| GGGATCTTGGGGGGCAACCT+AGG | - | chr5.1:7921604-7921623 | MS.gene20302:intron | 65.0% | |
| ! | GAAGGTCTTGGGGCACCAGG+AGG | - | chr5.1:7920705-7920724 | MS.gene20302:intron | 65.0% |
| ! | GAGGAAGGTCTTGGGGCACC+AGG | - | chr5.1:7920702-7920721 | MS.gene20302:intron | 65.0% |
| ! | GTCTTGGGGCACCAGGAGGT+GGG | - | chr5.1:7920709-7920728 | MS.gene20302:intron | 65.0% |
| ! | GGTCTTGGGGCACCAGGAGG+TGG | - | chr5.1:7920708-7920727 | MS.gene20302:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 7917780 | 7923000 | 7917780 | ID=MS.gene20302 |
| chr5.1 | mRNA | 7917780 | 7923000 | 7917780 | ID=MS.gene20302.t1;Parent=MS.gene20302 |
| chr5.1 | exon | 7922963 | 7923000 | 7922963 | ID=MS.gene20302.t1.exon1;Parent=MS.gene20302.t1 |
| chr5.1 | CDS | 7922963 | 7923000 | 7922963 | ID=cds.MS.gene20302.t1;Parent=MS.gene20302.t1 |
| chr5.1 | exon | 7922233 | 7922314 | 7922233 | ID=MS.gene20302.t1.exon2;Parent=MS.gene20302.t1 |
| chr5.1 | CDS | 7922233 | 7922314 | 7922233 | ID=cds.MS.gene20302.t1;Parent=MS.gene20302.t1 |
| chr5.1 | exon | 7922106 | 7922138 | 7922106 | ID=MS.gene20302.t1.exon3;Parent=MS.gene20302.t1 |
| chr5.1 | CDS | 7922106 | 7922138 | 7922106 | ID=cds.MS.gene20302.t1;Parent=MS.gene20302.t1 |
| chr5.1 | exon | 7919107 | 7919228 | 7919107 | ID=MS.gene20302.t1.exon4;Parent=MS.gene20302.t1 |
| chr5.1 | CDS | 7919107 | 7919228 | 7919107 | ID=cds.MS.gene20302.t1;Parent=MS.gene20302.t1 |
| chr5.1 | exon | 7918058 | 7918219 | 7918058 | ID=MS.gene20302.t1.exon5;Parent=MS.gene20302.t1 |
| chr5.1 | CDS | 7918058 | 7918219 | 7918058 | ID=cds.MS.gene20302.t1;Parent=MS.gene20302.t1 |
| chr5.1 | exon | 7917780 | 7917897 | 7917780 | ID=MS.gene20302.t1.exon6;Parent=MS.gene20302.t1 |
| chr5.1 | CDS | 7917780 | 7917897 | 7917780 | ID=cds.MS.gene20302.t1;Parent=MS.gene20302.t1 |
| Gene Sequence |
| Protein sequence |
