Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074595.t1 | XP_003629389.1 | 98.5 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 1.50E-182 | 648.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074595.t1 | Q9FJZ9 | 76.4 | 330 | 75 | 2 | 1 | 327 | 1 | 330 | 3.4e-143 | 509.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074595.t1 | G7LDV0 | 98.5 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 1.1e-182 | 648.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051973 | MS.gene074595 | 0.856445 | 3.20E-62 | -1.69E-46 |
| MS.gene054884 | MS.gene074595 | 0.810265 | 1.26E-50 | -1.69E-46 |
| MS.gene056633 | MS.gene074595 | -0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene056748 | MS.gene074595 | 0.828481 | 8.78E-55 | -1.69E-46 |
| MS.gene056988 | MS.gene074595 | 0.85055 | 1.58E-60 | -1.69E-46 |
| MS.gene057261 | MS.gene074595 | 0.801734 | 7.83E-49 | -1.69E-46 |
| MS.gene057717 | MS.gene074595 | 0.821578 | 3.75E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene074595 | 0.806393 | 8.41E-50 | -1.69E-46 |
| MS.gene059892 | MS.gene074595 | 0.807089 | 5.99E-50 | -1.69E-46 |
| MS.gene060087 | MS.gene074595 | 0.829928 | 3.91E-55 | -1.69E-46 |
| MS.gene060405 | MS.gene074595 | 0.802506 | 5.43E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074595 | MS.gene21483 | PPI |
| MS.gene015325 | MS.gene074595 | PPI |
| MS.gene074595 | MS.gene78768 | PPI |
| MS.gene053958 | MS.gene074595 | PPI |
| MS.gene074595 | MS.gene059685 | PPI |
| MS.gene09669 | MS.gene074595 | PPI |
| MS.gene074595 | MS.gene068824 | PPI |
| MS.gene068826 | MS.gene074595 | PPI |
| MS.gene068822 | MS.gene074595 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074595.t1 | MTR_8g076820 | 98.471 | 327 | 5 | 0 | 1 | 327 | 1 | 327 | 0.0 | 669 |
| MS.gene074595.t1 | MTR_5g021060 | 81.346 | 327 | 61 | 0 | 1 | 327 | 1 | 327 | 0.0 | 548 |
| MS.gene074595.t1 | MTR_1g022970 | 63.211 | 299 | 109 | 1 | 30 | 327 | 46 | 344 | 8.01e-132 | 379 |
| MS.gene074595.t1 | MTR_5g014100 | 55.238 | 315 | 127 | 5 | 23 | 327 | 18 | 328 | 1.57e-114 | 335 |
| MS.gene074595.t1 | MTR_3g072190 | 56.040 | 298 | 123 | 2 | 30 | 327 | 26 | 315 | 9.12e-110 | 322 |
| MS.gene074595.t1 | MTR_4g029170 | 51.368 | 329 | 147 | 5 | 1 | 327 | 1 | 318 | 3.93e-108 | 318 |
| MS.gene074595.t1 | MTR_7g093370 | 49.226 | 323 | 158 | 3 | 7 | 327 | 50 | 368 | 1.42e-107 | 318 |
| MS.gene074595.t1 | MTR_2g084080 | 48.930 | 327 | 154 | 3 | 1 | 327 | 1 | 314 | 1.97e-107 | 316 |
| MS.gene074595.t1 | MTR_2g084000 | 47.706 | 327 | 160 | 2 | 1 | 327 | 1 | 316 | 3.08e-107 | 316 |
| MS.gene074595.t1 | MTR_2g040000 | 52.273 | 308 | 141 | 2 | 24 | 327 | 23 | 328 | 2.17e-106 | 314 |
| MS.gene074595.t1 | MTR_2g029830 | 50.671 | 298 | 146 | 1 | 30 | 326 | 28 | 325 | 9.97e-106 | 313 |
| MS.gene074595.t1 | MTR_2g084020 | 48.571 | 315 | 155 | 1 | 13 | 327 | 8 | 315 | 1.10e-105 | 311 |
| MS.gene074595.t1 | MTR_2g029800 | 50.336 | 298 | 147 | 1 | 30 | 326 | 29 | 326 | 1.48e-105 | 313 |
| MS.gene074595.t1 | MTR_4g029180 | 54.730 | 296 | 124 | 4 | 34 | 327 | 31 | 318 | 1.59e-105 | 311 |
| MS.gene074595.t1 | MTR_2g029820 | 50.671 | 298 | 146 | 1 | 30 | 326 | 29 | 326 | 1.63e-105 | 313 |
| MS.gene074595.t1 | MTR_3g466200 | 51.495 | 301 | 135 | 4 | 30 | 327 | 25 | 317 | 4.24e-105 | 310 |
| MS.gene074595.t1 | MTR_2g029560 | 48.113 | 318 | 163 | 2 | 11 | 326 | 4 | 321 | 5.40e-105 | 311 |
| MS.gene074595.t1 | MTR_4g122640 | 50.000 | 302 | 147 | 2 | 27 | 327 | 35 | 333 | 1.10e-104 | 310 |
| MS.gene074595.t1 | MTR_5g074860 | 49.235 | 327 | 147 | 6 | 5 | 327 | 11 | 322 | 1.62e-104 | 309 |
| MS.gene074595.t1 | MTR_2g028980 | 48.758 | 322 | 160 | 3 | 6 | 326 | 9 | 326 | 4.08e-104 | 309 |
| MS.gene074595.t1 | MTR_2g084010 | 50.336 | 298 | 141 | 1 | 30 | 327 | 25 | 315 | 4.17e-104 | 308 |
| MS.gene074595.t1 | MTR_2g029815 | 46.933 | 326 | 167 | 2 | 2 | 326 | 6 | 326 | 4.31e-104 | 309 |
| MS.gene074595.t1 | MTR_2g029730 | 48.101 | 316 | 162 | 2 | 13 | 326 | 7 | 322 | 5.86e-104 | 308 |
| MS.gene074595.t1 | MTR_5g083860 | 52.333 | 300 | 133 | 3 | 30 | 327 | 31 | 322 | 9.57e-104 | 307 |
| MS.gene074595.t1 | MTR_1g054205 | 50.814 | 307 | 142 | 3 | 30 | 327 | 17 | 323 | 1.22e-103 | 307 |
| MS.gene074595.t1 | MTR_2g084110 | 48.889 | 315 | 153 | 2 | 13 | 327 | 8 | 314 | 3.65e-103 | 305 |
| MS.gene074595.t1 | MTR_7g072510 | 48.875 | 311 | 150 | 3 | 18 | 327 | 7 | 309 | 4.29e-103 | 305 |
| MS.gene074595.t1 | MTR_4g083710 | 47.385 | 325 | 154 | 4 | 5 | 326 | 10 | 320 | 4.74e-103 | 305 |
| MS.gene074595.t1 | MTR_3g094650 | 48.589 | 319 | 154 | 3 | 11 | 327 | 9 | 319 | 5.29e-103 | 305 |
| MS.gene074595.t1 | MTR_2g029740 | 49.333 | 300 | 151 | 1 | 28 | 326 | 27 | 326 | 1.11e-102 | 305 |
| MS.gene074595.t1 | MTR_2g029750 | 47.988 | 323 | 161 | 2 | 11 | 326 | 4 | 326 | 1.84e-101 | 302 |
| MS.gene074595.t1 | MTR_2g029860 | 49.833 | 299 | 149 | 1 | 30 | 327 | 29 | 327 | 2.67e-101 | 302 |
| MS.gene074595.t1 | MTR_2g029910 | 48.137 | 322 | 158 | 3 | 14 | 326 | 7 | 328 | 5.07e-101 | 301 |
| MS.gene074595.t1 | MTR_4g125940 | 50.323 | 310 | 149 | 2 | 21 | 327 | 19 | 326 | 1.33e-100 | 299 |
| MS.gene074595.t1 | MTR_2g084090 | 50.167 | 299 | 140 | 3 | 30 | 327 | 25 | 315 | 3.55e-100 | 298 |
| MS.gene074595.t1 | MTR_5g074970 | 51.316 | 304 | 136 | 4 | 28 | 327 | 28 | 323 | 4.98e-100 | 298 |
| MS.gene074595.t1 | MTR_5g074760 | 51.987 | 302 | 133 | 5 | 30 | 327 | 25 | 318 | 6.40e-100 | 297 |
| MS.gene074595.t1 | MTR_3g094670 | 50.157 | 319 | 149 | 3 | 11 | 327 | 9 | 319 | 8.87e-100 | 297 |
| MS.gene074595.t1 | MTR_2g029850 | 50.680 | 294 | 144 | 1 | 34 | 326 | 33 | 326 | 8.42e-99 | 295 |
| MS.gene074595.t1 | MTR_5g074740 | 51.656 | 302 | 134 | 5 | 30 | 327 | 25 | 318 | 1.35e-98 | 294 |
| MS.gene074595.t1 | MTR_3g094630 | 50.470 | 319 | 148 | 3 | 11 | 327 | 9 | 319 | 4.81e-98 | 292 |
| MS.gene074595.t1 | MTR_5g017850 | 47.561 | 328 | 163 | 4 | 1 | 327 | 4 | 323 | 8.22e-97 | 290 |
| MS.gene074595.t1 | MTR_5g074710 | 50.993 | 302 | 136 | 5 | 30 | 327 | 25 | 318 | 1.33e-96 | 289 |
| MS.gene074595.t1 | MTR_4g074995 | 46.319 | 326 | 145 | 5 | 4 | 326 | 6 | 304 | 3.36e-96 | 287 |
| MS.gene074595.t1 | MTR_7g072480 | 48.065 | 310 | 150 | 5 | 19 | 327 | 14 | 313 | 8.64e-96 | 286 |
| MS.gene074595.t1 | MTR_4g031140 | 47.315 | 298 | 153 | 3 | 30 | 327 | 28 | 321 | 1.13e-95 | 287 |
| MS.gene074595.t1 | MTR_7g026990 | 48.675 | 302 | 146 | 3 | 26 | 327 | 27 | 319 | 1.75e-95 | 286 |
| MS.gene074595.t1 | MTR_5g017860 | 46.341 | 328 | 167 | 4 | 1 | 327 | 4 | 323 | 6.10e-95 | 285 |
| MS.gene074595.t1 | MTR_4g029200 | 46.823 | 299 | 151 | 2 | 28 | 326 | 44 | 334 | 8.30e-94 | 282 |
| MS.gene074595.t1 | MTR_3g466180 | 47.664 | 321 | 151 | 3 | 7 | 327 | 17 | 320 | 9.99e-94 | 281 |
| MS.gene074595.t1 | MTR_4g029190 | 48.675 | 302 | 144 | 4 | 28 | 326 | 43 | 336 | 1.43e-93 | 281 |
| MS.gene074595.t1 | MTR_4g030890 | 48.000 | 300 | 152 | 3 | 28 | 327 | 98 | 393 | 1.95e-93 | 284 |
| MS.gene074595.t1 | MTR_4g125940 | 52.574 | 272 | 124 | 2 | 59 | 327 | 2 | 271 | 1.06e-92 | 277 |
| MS.gene074595.t1 | MTR_5g049280 | 45.973 | 298 | 157 | 3 | 34 | 327 | 37 | 334 | 2.21e-92 | 278 |
| MS.gene074595.t1 | MTR_4g074990 | 45.370 | 324 | 144 | 5 | 6 | 326 | 8 | 301 | 7.56e-91 | 273 |
| MS.gene074595.t1 | MTR_3g467600 | 45.597 | 318 | 160 | 5 | 13 | 326 | 12 | 320 | 3.65e-90 | 272 |
| MS.gene074595.t1 | MTR_3g072190 | 55.294 | 255 | 106 | 2 | 73 | 327 | 2 | 248 | 4.43e-90 | 270 |
| MS.gene074595.t1 | MTR_1g115900 | 45.307 | 309 | 159 | 3 | 20 | 326 | 17 | 317 | 1.22e-89 | 271 |
| MS.gene074595.t1 | MTR_2g088770 | 45.955 | 309 | 164 | 3 | 19 | 326 | 15 | 321 | 7.62e-88 | 266 |
| MS.gene074595.t1 | MTR_3g092990 | 47.176 | 301 | 157 | 2 | 28 | 327 | 24 | 323 | 4.82e-87 | 265 |
| MS.gene074595.t1 | MTR_2g029830 | 50.988 | 253 | 123 | 1 | 75 | 326 | 5 | 257 | 8.65e-87 | 263 |
| MS.gene074595.t1 | MTR_4g133800 | 46.075 | 293 | 148 | 6 | 35 | 326 | 46 | 329 | 1.79e-85 | 261 |
| MS.gene074595.t1 | MTR_4g046713 | 44.966 | 298 | 161 | 3 | 30 | 326 | 27 | 322 | 7.60e-83 | 254 |
| MS.gene074595.t1 | MTR_7g107520 | 43.789 | 322 | 173 | 5 | 5 | 326 | 3 | 316 | 1.33e-81 | 250 |
| MS.gene074595.t1 | MTR_4g074980 | 42.056 | 321 | 148 | 6 | 6 | 326 | 8 | 290 | 8.11e-80 | 245 |
| MS.gene074595.t1 | MTR_1g038680 | 44.781 | 297 | 159 | 5 | 34 | 326 | 33 | 328 | 1.30e-79 | 246 |
| MS.gene074595.t1 | MTR_4g074980 | 47.490 | 259 | 120 | 4 | 6 | 261 | 8 | 253 | 1.67e-79 | 243 |
| MS.gene074595.t1 | MTR_1g101830 | 43.333 | 300 | 161 | 7 | 30 | 327 | 27 | 319 | 1.42e-78 | 243 |
| MS.gene074595.t1 | MTR_5g074860 | 41.896 | 327 | 132 | 6 | 5 | 327 | 11 | 283 | 2.66e-78 | 241 |
| MS.gene074595.t1 | MTR_2g008710 | 44.444 | 297 | 155 | 5 | 34 | 326 | 31 | 321 | 2.82e-78 | 242 |
| MS.gene074595.t1 | MTR_5g022870 | 41.284 | 327 | 178 | 6 | 1 | 327 | 1 | 313 | 1.65e-76 | 237 |
| MS.gene074595.t1 | MTR_2g437770 | 44.218 | 294 | 153 | 7 | 34 | 326 | 54 | 337 | 5.54e-76 | 237 |
| MS.gene074595.t1 | MTR_3g092990 | 44.850 | 301 | 153 | 3 | 28 | 327 | 24 | 312 | 1.13e-74 | 233 |
| MS.gene074595.t1 | MTR_4g114210 | 42.296 | 331 | 171 | 7 | 1 | 326 | 1 | 316 | 1.52e-74 | 232 |
| MS.gene074595.t1 | MTR_0155s0040 | 39.755 | 327 | 182 | 7 | 1 | 327 | 1 | 312 | 2.08e-74 | 232 |
| MS.gene074595.t1 | MTR_8g075100 | 40.864 | 301 | 171 | 5 | 27 | 327 | 23 | 316 | 1.94e-73 | 229 |
| MS.gene074595.t1 | MTR_1g086490 | 42.434 | 304 | 163 | 4 | 34 | 326 | 34 | 336 | 2.14e-73 | 230 |
| MS.gene074595.t1 | MTR_1g086320 | 42.088 | 297 | 167 | 3 | 34 | 326 | 34 | 329 | 3.73e-73 | 229 |
| MS.gene074595.t1 | MTR_1g025980 | 39.877 | 326 | 184 | 5 | 1 | 326 | 1 | 314 | 2.38e-72 | 227 |
| MS.gene074595.t1 | MTR_6g027440 | 39.506 | 324 | 182 | 7 | 5 | 327 | 1 | 311 | 3.22e-72 | 226 |
| MS.gene074595.t1 | MTR_1g077000 | 38.532 | 327 | 185 | 6 | 1 | 327 | 14 | 324 | 9.58e-72 | 225 |
| MS.gene074595.t1 | MTR_7g086820 | 40.476 | 294 | 167 | 6 | 34 | 327 | 24 | 309 | 1.01e-71 | 225 |
| MS.gene074595.t1 | MTR_7g086870 | 39.796 | 294 | 166 | 5 | 34 | 327 | 26 | 308 | 3.20e-71 | 224 |
| MS.gene074595.t1 | MTR_1g066710 | 39.803 | 304 | 171 | 5 | 28 | 327 | 25 | 320 | 4.00e-70 | 221 |
| MS.gene074595.t1 | MTR_5g016010 | 39.441 | 322 | 190 | 4 | 8 | 326 | 6 | 325 | 7.40e-70 | 221 |
| MS.gene074595.t1 | MTR_8g062780 | 39.498 | 319 | 186 | 4 | 10 | 326 | 7 | 320 | 8.05e-70 | 221 |
| MS.gene074595.t1 | MTR_4g087965 | 40.940 | 298 | 170 | 6 | 34 | 326 | 46 | 342 | 9.80e-67 | 213 |
| MS.gene074595.t1 | MTR_7g029030 | 39.933 | 298 | 172 | 4 | 30 | 326 | 25 | 316 | 3.10e-66 | 211 |
| MS.gene074595.t1 | MTR_1g066380 | 39.274 | 303 | 174 | 4 | 28 | 327 | 25 | 320 | 3.55e-66 | 211 |
| MS.gene074595.t1 | MTR_6g043280 | 38.361 | 305 | 177 | 6 | 23 | 326 | 34 | 328 | 5.45e-66 | 211 |
| MS.gene074595.t1 | MTR_2g067440 | 37.576 | 330 | 173 | 6 | 27 | 326 | 57 | 383 | 8.02e-66 | 212 |
| MS.gene074595.t1 | MTR_1g090760 | 36.170 | 329 | 198 | 6 | 1 | 326 | 7 | 326 | 6.41e-65 | 208 |
| MS.gene074595.t1 | MTR_2g078610 | 36.446 | 332 | 177 | 6 | 27 | 326 | 73 | 402 | 9.66e-65 | 210 |
| MS.gene074595.t1 | MTR_1g009750 | 38.838 | 327 | 191 | 6 | 4 | 326 | 3 | 324 | 1.07e-64 | 207 |
| MS.gene074595.t1 | MTR_6g043240 | 37.690 | 329 | 183 | 8 | 6 | 326 | 13 | 327 | 1.67e-64 | 207 |
| MS.gene074595.t1 | MTR_2g077990 | 36.446 | 332 | 177 | 6 | 27 | 326 | 73 | 402 | 3.00e-64 | 209 |
| MS.gene074595.t1 | MTR_4g132490 | 36.250 | 320 | 200 | 3 | 8 | 326 | 7 | 323 | 3.10e-64 | 206 |
| MS.gene074595.t1 | MTR_1g066640 | 38.614 | 303 | 176 | 4 | 28 | 327 | 25 | 320 | 1.06e-63 | 204 |
| MS.gene074595.t1 | MTR_4g127670 | 38.721 | 297 | 173 | 4 | 34 | 326 | 28 | 319 | 1.20e-63 | 204 |
| MS.gene074595.t1 | MTR_2g008160 | 41.639 | 305 | 165 | 7 | 28 | 326 | 22 | 319 | 1.33e-63 | 204 |
| MS.gene074595.t1 | MTR_3g105790 | 40.203 | 296 | 168 | 4 | 34 | 326 | 29 | 318 | 2.13e-63 | 204 |
| MS.gene074595.t1 | MTR_2g099175 | 36.176 | 340 | 189 | 8 | 5 | 327 | 4 | 332 | 2.86e-63 | 204 |
| MS.gene074595.t1 | MTR_1g066680 | 38.889 | 306 | 175 | 6 | 26 | 327 | 22 | 319 | 8.82e-63 | 202 |
| MS.gene074595.t1 | MTR_4g095450 | 38.199 | 322 | 189 | 5 | 8 | 326 | 6 | 320 | 1.06e-62 | 202 |
| MS.gene074595.t1 | MTR_6g043460 | 38.514 | 296 | 168 | 6 | 34 | 326 | 40 | 324 | 2.61e-62 | 202 |
| MS.gene074595.t1 | MTR_2g078280 | 36.646 | 322 | 170 | 7 | 27 | 316 | 73 | 392 | 5.71e-60 | 197 |
| MS.gene074595.t1 | MTR_0286s0010 | 36.755 | 302 | 185 | 5 | 28 | 326 | 32 | 330 | 2.37e-58 | 191 |
| MS.gene074595.t1 | MTR_6g008075 | 36.755 | 302 | 185 | 5 | 28 | 326 | 32 | 330 | 2.37e-58 | 191 |
| MS.gene074595.t1 | MTR_4g132110 | 34.431 | 334 | 201 | 7 | 1 | 326 | 1 | 324 | 1.20e-57 | 189 |
| MS.gene074595.t1 | MTR_5g074700 | 45.652 | 230 | 101 | 6 | 101 | 327 | 3 | 211 | 6.77e-57 | 184 |
| MS.gene074595.t1 | MTR_2g008730 | 38.047 | 297 | 150 | 5 | 34 | 326 | 31 | 297 | 1.30e-56 | 186 |
| MS.gene074595.t1 | MTR_3g072210 | 51.596 | 188 | 83 | 2 | 141 | 327 | 55 | 235 | 1.77e-56 | 183 |
| MS.gene074595.t1 | MTR_2g067450 | 36.601 | 306 | 181 | 6 | 27 | 326 | 8 | 306 | 2.28e-56 | 185 |
| MS.gene074595.t1 | MTR_4g132110 | 33.923 | 339 | 201 | 8 | 1 | 326 | 1 | 329 | 2.65e-55 | 183 |
| MS.gene074595.t1 | MTR_5g033470 | 36.275 | 306 | 185 | 5 | 29 | 327 | 72 | 374 | 4.07e-55 | 184 |
| MS.gene074595.t1 | MTR_1g066380 | 38.911 | 257 | 147 | 4 | 74 | 327 | 3 | 252 | 1.06e-54 | 179 |
| MS.gene074595.t1 | MTR_1g009750 | 35.385 | 325 | 188 | 7 | 4 | 326 | 3 | 307 | 3.53e-52 | 174 |
| MS.gene074595.t1 | MTR_2g008160 | 37.705 | 305 | 142 | 7 | 28 | 326 | 22 | 284 | 5.45e-51 | 171 |
| MS.gene074595.t1 | MTR_0147s0010 | 33.227 | 313 | 174 | 4 | 34 | 326 | 81 | 378 | 3.91e-46 | 160 |
| MS.gene074595.t1 | MTR_3g105790 | 40.851 | 235 | 134 | 3 | 95 | 326 | 10 | 242 | 1.80e-45 | 155 |
| MS.gene074595.t1 | MTR_7g072490 | 40.678 | 236 | 78 | 3 | 76 | 311 | 2 | 175 | 6.86e-45 | 152 |
| MS.gene074595.t1 | MTR_2g008160 | 47.126 | 174 | 84 | 4 | 28 | 199 | 22 | 189 | 3.33e-43 | 148 |
| MS.gene074595.t1 | MTR_2g029880 | 43.386 | 189 | 94 | 3 | 140 | 326 | 7 | 184 | 1.31e-42 | 147 |
| MS.gene074595.t1 | MTR_3g072260 | 65.138 | 109 | 38 | 0 | 30 | 138 | 26 | 134 | 2.20e-42 | 144 |
| MS.gene074595.t1 | MTR_2g078560 | 30.942 | 223 | 122 | 4 | 135 | 326 | 95 | 316 | 1.89e-29 | 115 |
| MS.gene074595.t1 | MTR_1g089005 | 41.304 | 138 | 69 | 3 | 11 | 142 | 1 | 132 | 4.36e-25 | 99.4 |
| MS.gene074595.t1 | MTR_2g077980 | 28.309 | 272 | 156 | 7 | 92 | 326 | 11 | 280 | 9.09e-25 | 101 |
| MS.gene074595.t1 | MTR_7g086790 | 35.979 | 189 | 99 | 6 | 77 | 265 | 17 | 183 | 3.50e-23 | 95.1 |
| MS.gene074595.t1 | MTR_3g462850 | 40.000 | 140 | 76 | 5 | 194 | 327 | 9 | 146 | 4.84e-22 | 90.9 |
| MS.gene074595.t1 | MTR_4g031040 | 36.571 | 175 | 67 | 3 | 89 | 263 | 1 | 131 | 1.16e-21 | 89.4 |
| MS.gene074595.t1 | MTR_6g048160 | 60.563 | 71 | 24 | 2 | 69 | 139 | 22 | 88 | 5.87e-21 | 86.3 |
| MS.gene074595.t1 | MTR_5g058120 | 33.537 | 164 | 93 | 4 | 165 | 326 | 6 | 155 | 1.01e-18 | 84.3 |
| MS.gene074595.t1 | MTR_4g114220 | 52.439 | 82 | 29 | 2 | 56 | 137 | 29 | 100 | 1.26e-18 | 81.3 |
| MS.gene074595.t1 | MTR_5g074770 | 47.727 | 88 | 44 | 2 | 241 | 327 | 20 | 106 | 3.57e-18 | 79.3 |
| MS.gene074595.t1 | MTR_7g086810 | 34.711 | 121 | 53 | 1 | 28 | 148 | 4 | 98 | 7.76e-18 | 81.6 |
| MS.gene074595.t1 | MTR_3g107060 | 28.090 | 267 | 117 | 9 | 61 | 311 | 105 | 312 | 9.87e-16 | 77.0 |
| MS.gene074595.t1 | MTR_4g012865 | 53.846 | 65 | 30 | 0 | 33 | 97 | 80 | 144 | 1.92e-15 | 72.8 |
| MS.gene074595.t1 | MTR_1g098320 | 42.667 | 75 | 42 | 1 | 252 | 326 | 47 | 120 | 3.42e-15 | 72.0 |
| MS.gene074595.t1 | MTR_2g029930 | 41.860 | 86 | 25 | 2 | 34 | 108 | 23 | 94 | 8.74e-15 | 69.7 |
| MS.gene074595.t1 | MTR_7g086785 | 45.946 | 74 | 39 | 1 | 75 | 148 | 3 | 75 | 2.88e-14 | 69.3 |
| MS.gene074595.t1 | MTR_7g107500 | 47.945 | 73 | 36 | 2 | 254 | 326 | 23 | 93 | 1.11e-11 | 60.8 |
| MS.gene074595.t1 | MTR_3g088160 | 28.713 | 202 | 105 | 9 | 123 | 312 | 180 | 354 | 1.50e-11 | 65.1 |
| MS.gene074595.t1 | MTR_3g088160 | 28.713 | 202 | 105 | 9 | 123 | 312 | 180 | 354 | 2.32e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074595.t1 | AT5G66390 | 76.364 | 330 | 75 | 2 | 1 | 327 | 1 | 330 | 0.0 | 526 |
| MS.gene074595.t1 | AT4G36430 | 68.502 | 327 | 103 | 0 | 1 | 327 | 1 | 327 | 1.61e-163 | 459 |
| MS.gene074595.t1 | AT2G18150 | 66.366 | 333 | 106 | 1 | 1 | 327 | 1 | 333 | 1.85e-163 | 459 |
| MS.gene074595.t1 | AT3G50990 | 65.538 | 325 | 107 | 1 | 8 | 327 | 14 | 338 | 1.17e-153 | 434 |
| MS.gene074595.t1 | AT2G18140 | 61.145 | 332 | 124 | 1 | 1 | 327 | 1 | 332 | 9.72e-148 | 419 |
| MS.gene074595.t1 | AT1G44970 | 64.452 | 301 | 106 | 1 | 28 | 327 | 43 | 343 | 1.43e-136 | 391 |
| MS.gene074595.t1 | AT2G35380 | 54.870 | 308 | 130 | 3 | 27 | 327 | 27 | 332 | 2.59e-111 | 327 |
| MS.gene074595.t1 | AT4G08780 | 54.153 | 301 | 135 | 2 | 30 | 327 | 24 | 324 | 1.22e-109 | 323 |
| MS.gene074595.t1 | AT4G08770 | 54.153 | 301 | 135 | 2 | 30 | 327 | 24 | 324 | 3.77e-109 | 322 |
| MS.gene074595.t1 | AT5G06720 | 52.843 | 299 | 140 | 1 | 30 | 327 | 32 | 330 | 4.78e-109 | 321 |
| MS.gene074595.t1 | AT3G49110 | 50.943 | 318 | 153 | 2 | 13 | 327 | 16 | 333 | 1.40e-105 | 313 |
| MS.gene074595.t1 | AT3G32980 | 51.768 | 311 | 146 | 3 | 21 | 327 | 21 | 331 | 2.24e-105 | 312 |
| MS.gene074595.t1 | AT2G38390 | 51.333 | 300 | 144 | 2 | 30 | 327 | 31 | 330 | 7.87e-104 | 308 |
| MS.gene074595.t1 | AT3G49120 | 52.303 | 304 | 142 | 2 | 27 | 327 | 29 | 332 | 1.16e-103 | 308 |
| MS.gene074595.t1 | AT5G05340 | 50.836 | 299 | 137 | 3 | 30 | 326 | 30 | 320 | 2.61e-103 | 306 |
| MS.gene074595.t1 | AT5G06730 | 49.833 | 299 | 149 | 1 | 30 | 327 | 33 | 331 | 1.12e-102 | 305 |
| MS.gene074595.t1 | AT5G19890 | 50.000 | 318 | 150 | 4 | 13 | 327 | 13 | 324 | 1.45e-99 | 296 |
| MS.gene074595.t1 | AT1G14550 | 47.077 | 325 | 158 | 4 | 4 | 326 | 5 | 317 | 5.07e-99 | 295 |
| MS.gene074595.t1 | AT1G49570 | 52.189 | 297 | 138 | 3 | 33 | 326 | 51 | 346 | 9.53e-99 | 295 |
| MS.gene074595.t1 | AT5G58400 | 49.834 | 301 | 140 | 4 | 30 | 327 | 30 | 322 | 2.65e-98 | 293 |
| MS.gene074595.t1 | AT2G38380 | 50.333 | 300 | 147 | 2 | 30 | 327 | 31 | 330 | 3.67e-98 | 294 |
| MS.gene074595.t1 | AT4G16270 | 49.831 | 295 | 144 | 3 | 34 | 327 | 54 | 345 | 2.49e-97 | 291 |
| MS.gene074595.t1 | AT5G58390 | 48.148 | 324 | 149 | 5 | 7 | 327 | 6 | 313 | 3.54e-97 | 290 |
| MS.gene074595.t1 | AT2G22420 | 48.505 | 301 | 151 | 3 | 27 | 327 | 20 | 316 | 3.65e-96 | 288 |
| MS.gene074595.t1 | AT1G14540 | 42.812 | 320 | 168 | 2 | 7 | 326 | 7 | 311 | 6.56e-90 | 271 |
| MS.gene074595.t1 | AT1G68850 | 44.816 | 299 | 160 | 3 | 34 | 327 | 34 | 332 | 1.52e-89 | 271 |
| MS.gene074595.t1 | AT3G03670 | 43.558 | 326 | 168 | 5 | 6 | 327 | 5 | 318 | 3.44e-88 | 267 |
| MS.gene074595.t1 | AT4G11290 | 43.519 | 324 | 174 | 4 | 5 | 326 | 6 | 322 | 1.40e-85 | 261 |
| MS.gene074595.t1 | AT1G05260 | 45.638 | 298 | 159 | 3 | 30 | 326 | 26 | 321 | 2.16e-85 | 260 |
| MS.gene074595.t1 | AT5G19880 | 42.901 | 324 | 175 | 4 | 8 | 327 | 9 | 326 | 7.87e-84 | 256 |
| MS.gene074595.t1 | AT2G35380 | 53.252 | 246 | 106 | 3 | 89 | 327 | 1 | 244 | 7.47e-83 | 251 |
| MS.gene074595.t1 | AT5G15180 | 43.810 | 315 | 168 | 4 | 13 | 327 | 21 | 326 | 5.95e-82 | 251 |
| MS.gene074595.t1 | AT3G21770 | 44.631 | 298 | 162 | 3 | 30 | 326 | 29 | 324 | 6.18e-81 | 249 |
| MS.gene074595.t1 | AT5G64120 | 43.686 | 293 | 158 | 5 | 34 | 326 | 39 | 324 | 3.04e-80 | 247 |
| MS.gene074595.t1 | AT1G71695 | 41.742 | 333 | 176 | 7 | 5 | 326 | 10 | 335 | 4.57e-80 | 248 |
| MS.gene074595.t1 | AT5G17820 | 39.450 | 327 | 181 | 6 | 1 | 327 | 1 | 310 | 1.24e-78 | 243 |
| MS.gene074595.t1 | AT5G42180 | 43.082 | 318 | 173 | 5 | 10 | 327 | 5 | 314 | 3.20e-78 | 242 |
| MS.gene074595.t1 | AT5G17820 | 39.450 | 327 | 181 | 6 | 1 | 327 | 54 | 363 | 1.72e-77 | 241 |
| MS.gene074595.t1 | AT3G01190 | 43.197 | 294 | 162 | 4 | 34 | 327 | 30 | 318 | 4.29e-76 | 236 |
| MS.gene074595.t1 | AT5G51890 | 39.818 | 329 | 184 | 7 | 1 | 327 | 3 | 319 | 1.25e-75 | 235 |
| MS.gene074595.t1 | AT2G41480 | 43.289 | 298 | 158 | 5 | 34 | 326 | 33 | 324 | 2.16e-75 | 235 |
| MS.gene074595.t1 | AT1G05240 | 41.806 | 299 | 161 | 6 | 34 | 326 | 30 | 321 | 7.72e-74 | 231 |
| MS.gene074595.t1 | AT1G05250 | 41.806 | 299 | 161 | 6 | 34 | 326 | 30 | 321 | 7.72e-74 | 231 |
| MS.gene074595.t1 | AT2G39040 | 44.186 | 301 | 158 | 7 | 34 | 327 | 50 | 347 | 8.53e-74 | 231 |
| MS.gene074595.t1 | AT5G39580 | 41.892 | 296 | 160 | 7 | 34 | 326 | 29 | 315 | 2.49e-72 | 227 |
| MS.gene074595.t1 | AT4G26010 | 39.355 | 310 | 173 | 6 | 19 | 327 | 11 | 306 | 6.73e-71 | 223 |
| MS.gene074595.t1 | AT4G26010 | 39.355 | 310 | 173 | 6 | 19 | 327 | 39 | 334 | 1.49e-70 | 223 |
| MS.gene074595.t1 | AT5G64100 | 41.695 | 295 | 162 | 5 | 34 | 326 | 41 | 327 | 2.05e-69 | 219 |
| MS.gene074595.t1 | AT4G33870 | 37.313 | 335 | 171 | 5 | 28 | 326 | 66 | 397 | 4.14e-69 | 221 |
| MS.gene074595.t1 | AT4G33420 | 40.184 | 326 | 177 | 8 | 2 | 327 | 15 | 322 | 1.00e-67 | 215 |
| MS.gene074595.t1 | AT4G37520 | 38.079 | 302 | 183 | 3 | 28 | 326 | 25 | 325 | 1.74e-67 | 214 |
| MS.gene074595.t1 | AT4G33420 | 40.184 | 326 | 177 | 8 | 2 | 327 | 62 | 369 | 4.03e-67 | 215 |
| MS.gene074595.t1 | AT5G47000 | 37.888 | 322 | 190 | 5 | 7 | 326 | 13 | 326 | 9.05e-67 | 213 |
| MS.gene074595.t1 | AT1G34510 | 38.978 | 313 | 176 | 6 | 16 | 327 | 8 | 306 | 1.98e-66 | 211 |
| MS.gene074595.t1 | AT1G30870 | 41.216 | 296 | 162 | 6 | 34 | 326 | 55 | 341 | 2.04e-66 | 213 |
| MS.gene074595.t1 | AT4G37530 | 38.667 | 300 | 180 | 3 | 30 | 326 | 27 | 325 | 2.86e-66 | 211 |
| MS.gene074595.t1 | AT2G37130 | 39.933 | 298 | 168 | 5 | 34 | 327 | 3 | 293 | 3.57e-66 | 210 |
| MS.gene074595.t1 | AT5G64110 | 41.892 | 296 | 162 | 6 | 34 | 326 | 38 | 326 | 7.11e-66 | 211 |
| MS.gene074595.t1 | AT2G37130 | 39.933 | 298 | 168 | 5 | 34 | 327 | 34 | 324 | 7.51e-66 | 210 |
| MS.gene074595.t1 | AT4G37520 | 37.748 | 302 | 181 | 4 | 28 | 326 | 25 | 322 | 1.09e-65 | 210 |
| MS.gene074595.t1 | AT4G25980 | 38.926 | 298 | 172 | 5 | 34 | 326 | 30 | 322 | 1.15e-65 | 210 |
| MS.gene074595.t1 | AT5G40150 | 39.203 | 301 | 175 | 4 | 28 | 326 | 30 | 324 | 1.23e-65 | 210 |
| MS.gene074595.t1 | AT1G24110 | 38.272 | 324 | 189 | 7 | 6 | 326 | 3 | 318 | 2.03e-65 | 209 |
| MS.gene074595.t1 | AT2G34060 | 39.934 | 303 | 176 | 5 | 30 | 327 | 42 | 343 | 2.73e-65 | 209 |
| MS.gene074595.t1 | AT3G28200 | 38.538 | 301 | 176 | 4 | 28 | 326 | 19 | 312 | 4.15e-65 | 208 |
| MS.gene074595.t1 | AT4G17690 | 39.130 | 299 | 174 | 4 | 30 | 326 | 26 | 318 | 6.63e-65 | 208 |
| MS.gene074595.t1 | AT2G18980 | 37.386 | 329 | 193 | 5 | 1 | 326 | 1 | 319 | 1.10e-64 | 207 |
| MS.gene074595.t1 | AT5G14130 | 35.737 | 319 | 200 | 5 | 9 | 326 | 12 | 326 | 1.26e-64 | 207 |
| MS.gene074595.t1 | AT1G77100 | 40.181 | 331 | 172 | 11 | 5 | 326 | 2 | 315 | 2.23e-64 | 206 |
| MS.gene074595.t1 | AT5G14130 | 35.737 | 319 | 200 | 5 | 9 | 326 | 53 | 367 | 5.06e-64 | 207 |
| MS.gene074595.t1 | AT4G31760 | 38.871 | 319 | 185 | 5 | 10 | 326 | 12 | 322 | 7.47e-64 | 205 |
| MS.gene074595.t1 | AT5G22410 | 36.810 | 326 | 187 | 9 | 7 | 327 | 11 | 322 | 7.56e-63 | 202 |
| MS.gene074595.t1 | AT5G67400 | 38.411 | 302 | 182 | 3 | 28 | 326 | 25 | 325 | 9.15e-63 | 202 |
| MS.gene074595.t1 | AT3G49960 | 37.838 | 296 | 180 | 3 | 34 | 326 | 31 | 325 | 2.92e-62 | 201 |
| MS.gene074595.t1 | AT2G24800 | 38.851 | 296 | 173 | 5 | 34 | 326 | 35 | 325 | 5.94e-62 | 200 |
| MS.gene074595.t1 | AT2G43480 | 37.049 | 305 | 179 | 7 | 28 | 327 | 36 | 332 | 4.33e-60 | 196 |
| MS.gene074595.t1 | AT4G30170 | 36.066 | 305 | 185 | 5 | 26 | 326 | 23 | 321 | 1.31e-59 | 194 |
| MS.gene074595.t1 | AT4G21960 | 37.162 | 296 | 176 | 4 | 34 | 326 | 35 | 323 | 1.91e-58 | 191 |
| MS.gene074595.t1 | AT5G24070 | 36.949 | 295 | 174 | 6 | 38 | 327 | 45 | 332 | 1.80e-57 | 189 |
| MS.gene074595.t1 | AT4G37530 | 37.945 | 253 | 154 | 2 | 30 | 279 | 27 | 279 | 3.61e-54 | 179 |
| MS.gene074595.t1 | AT3G17070 | 34.448 | 299 | 185 | 6 | 34 | 326 | 42 | 335 | 7.70e-50 | 169 |
| MS.gene074595.t1 | AT4G25980 | 46.341 | 164 | 84 | 3 | 34 | 197 | 75 | 234 | 9.51e-44 | 152 |
| MS.gene074595.t1 | AT5G39580 | 45.029 | 171 | 89 | 3 | 34 | 204 | 29 | 194 | 3.02e-43 | 149 |
| MS.gene074595.t1 | AT2G24800 | 40.933 | 193 | 108 | 2 | 34 | 224 | 35 | 223 | 7.95e-38 | 135 |
| MS.gene074595.t1 | AT3G17070 | 32.364 | 275 | 174 | 7 | 58 | 326 | 4 | 272 | 1.27e-36 | 133 |
| MS.gene074595.t1 | AT3G42570 | 39.560 | 91 | 54 | 1 | 106 | 195 | 57 | 147 | 1.76e-13 | 67.4 |
| MS.gene074595.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 179 | 359 | 1.42e-12 | 68.2 |
| MS.gene074595.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.44e-12 | 68.2 |
| MS.gene074595.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.44e-12 | 68.2 |
| MS.gene074595.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.44e-12 | 68.2 |
Find 0 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAACCAAATATAATTTA+TGG | - | 57557:6679-6698 | MS.gene074595:intergenic | 10.0% |
| !! | CATATATAAATTTGAATTTG+AGG | - | 57557:7142-7161 | MS.gene074595:intergenic | 15.0% |
| !! | AAAAGATAAAATAGAGCTTA+TGG | - | 57557:6703-6722 | MS.gene074595:intergenic | 20.0% |
| !! | ACATGTCCATAAATTATATT+TGG | + | 57557:6670-6689 | MS.gene074595:intron | 20.0% |
| !! | AGTCTGATTTAAATAGATAT+AGG | - | 57557:7098-7117 | MS.gene074595:intergenic | 20.0% |
| !! | GTCTGATTTAAATAGATATA+GGG | - | 57557:7097-7116 | MS.gene074595:intergenic | 20.0% |
| !! | TAATATTATATTATTCTCCG+TGG | + | 57557:7246-7265 | MS.gene074595:intron | 20.0% |
| !! | TTGAATGTAATCATATATGT+TGG | - | 57557:6361-6380 | MS.gene074595:intergenic | 20.0% |
| ! | AAATTTATGTGACAAGTTCA+AGG | - | 57557:7009-7028 | MS.gene074595:intergenic | 25.0% |
| ! | AAATTTCGTGCAATTGTAAA+GGG | + | 57557:7458-7477 | MS.gene074595:intron | 25.0% |
| ! | AATGACTATTTACTTAGCTA+CGG | - | 57557:7362-7381 | MS.gene074595:intergenic | 25.0% |
| ! | TCAATATTGTTAGATAACAG+TGG | + | 57557:6434-6453 | MS.gene074595:CDS | 25.0% |
| !! | TAATTGTTGTCGAATTTTGT+TGG | - | 57557:7655-7674 | MS.gene074595:intergenic | 25.0% |
| !! | TTACTATTCCTTTTATGTGT+AGG | + | 57557:6811-6830 | MS.gene074595:intron | 25.0% |
| AGTCATAGAATTGTGGATAA+AGG | - | 57557:6065-6084 | MS.gene074595:intergenic | 30.0% | |
| CAAATTTCGTGCAATTGTAA+AGG | + | 57557:7457-7476 | MS.gene074595:intron | 30.0% | |
| CAATTACTTCAAGAACCTAT+TGG | + | 57557:7669-7688 | MS.gene074595:CDS | 30.0% | |
| CATGAATAGTCATAGAATTG+TGG | - | 57557:6072-6091 | MS.gene074595:intergenic | 30.0% | |
| CTATTACCTACATCACATTT+AGG | - | 57557:7218-7237 | MS.gene074595:intergenic | 30.0% | |
| CTGACTAAATTCAAACTTCA+AGG | + | 57557:6944-6963 | MS.gene074595:CDS | 30.0% | |
| CTTGAAGTTTGAATTTAGTC+AGG | - | 57557:6946-6965 | MS.gene074595:intergenic | 30.0% | |
| GAAACATTAGAACAAATTGC+AGG | + | 57557:7854-7873 | MS.gene074595:CDS | 30.0% | |
| TACCAAAAACTTTGATGTTG+CGG | + | 57557:6253-6272 | MS.gene074595:intron | 30.0% | |
| TTAACAATATTCTGAGCTTG+TGG | - | 57557:6096-6115 | MS.gene074595:intergenic | 30.0% | |
| !!! | CAACATCAAAGTTTTTGGTA+CGG | - | 57557:6253-6272 | MS.gene074595:intergenic | 30.0% |
| ATACCACCTAAATGTGATGT+AGG | + | 57557:7209-7228 | MS.gene074595:intron | 35.0% | |
| ATACCTTGACAAAACAGTCA+TGG | - | 57557:6185-6204 | MS.gene074595:intergenic | 35.0% | |
| CAAATCCTCTAGCTGAATTA+CGG | - | 57557:6493-6512 | MS.gene074595:intergenic | 35.0% | |
| GCAAGTGATGCTTAAACTTT+AGG | - | 57557:7316-7335 | MS.gene074595:intergenic | 35.0% | |
| GCTAAGTCTATGATCAAGAT+GGG | + | 57557:7802-7821 | MS.gene074595:CDS | 35.0% | |
| GGAAATATATCTCCTTTGAC+AGG | + | 57557:7823-7842 | MS.gene074595:CDS | 35.0% | |
| TAATTCAGCTAGAGGATTTG+AGG | + | 57557:6493-6512 | MS.gene074595:CDS | 35.0% | |
| TGAATTTAGTCAGGATTGTC+TGG | - | 57557:6937-6956 | MS.gene074595:intergenic | 35.0% | |
| TGCTAAGTCTATGATCAAGA+TGG | + | 57557:7801-7820 | MS.gene074595:CDS | 35.0% | |
| TTACCTACATCACATTTAGG+TGG | - | 57557:7215-7234 | MS.gene074595:intergenic | 35.0% | |
| TTATCACATATGTCAGTCCA+CGG | - | 57557:7266-7285 | MS.gene074595:intergenic | 35.0% | |
| ! | AAGAAGTTGATCATGTTGCA+GGG | + | 57557:6401-6420 | MS.gene074595:intron | 35.0% |
| ! | AGTCTAGGAAGAACAGATTT+TGG | - | 57557:7624-7643 | MS.gene074595:intergenic | 35.0% |
| ! | ATTGTCTGGAATGTGTTGTT+TGG | - | 57557:6923-6942 | MS.gene074595:intergenic | 35.0% |
| ! | GAAGCATTATTAGTGAGAAG+GGG | + | 57557:6456-6475 | MS.gene074595:CDS | 35.0% |
| ! | TAAGAAGTTGATCATGTTGC+AGG | + | 57557:6400-6419 | MS.gene074595:intron | 35.0% |
| ! | TATTCCTTTTATGTGTAGGC+TGG | + | 57557:6815-6834 | MS.gene074595:intron | 35.0% |
| ! | TTTCCATGACTGTTTTGTCA+AGG | + | 57557:6179-6198 | MS.gene074595:CDS | 35.0% |
| !! | AAGAACCTATTGGCTTACAA+GGG | + | 57557:7679-7698 | MS.gene074595:CDS | 35.0% |
| !! | AGTTTCTTGTGCTGACATTT+TGG | + | 57557:6562-6581 | MS.gene074595:CDS | 35.0% |
| !! | GGAAGCATTATTAGTGAGAA+GGG | + | 57557:6455-6474 | MS.gene074595:CDS | 35.0% |
| !! | TGGAAGCATTATTAGTGAGA+AGG | + | 57557:6454-6473 | MS.gene074595:CDS | 35.0% |
| !! | TTGTCTGGAATGTGTTGTTT+GGG | - | 57557:6922-6941 | MS.gene074595:intergenic | 35.0% |
| AAAAGTGAAGCAGCTATACG+AGG | - | 57557:6150-6169 | MS.gene074594:intergenic | 40.0% | |
| ACCTTGACTTTCCTATAGTG+TGG | - | 57557:7486-7505 | MS.gene074594:intergenic | 40.0% | |
| ACTCAATGTCCAAAATCTGG+TGG | + | 57557:7595-7614 | MS.gene074595:CDS | 40.0% | |
| AGTTGAATCTCTAGCAGCTA+TGG | - | 57557:6588-6607 | MS.gene074595:intergenic | 40.0% | |
| ATAGTCCCTTGTAAGCCAAT+AGG | - | 57557:7687-7706 | MS.gene074595:intergenic | 40.0% | |
| ATCTCCTTTGACAGGTTCAA+GGG | + | 57557:7831-7850 | MS.gene074595:CDS | 40.0% | |
| CAAAGACTCTACAACCAAAC+TGG | + | 57557:7520-7539 | MS.gene074595:CDS | 40.0% | |
| CTCTACAACCAAACTGGAAA+TGG | + | 57557:7526-7545 | MS.gene074595:CDS | 40.0% | |
| GAATCAAGAATCAGCTGAGT+TGG | + | 57557:7735-7754 | MS.gene074595:CDS | 40.0% | |
| GACCATGTGATATAAAGTCG+TGG | + | 57557:6227-6246 | MS.gene074595:intron | 40.0% | |
| GTTGATCTTGTTGCTCTTTC+TGG | + | 57557:6977-6996 | MS.gene074595:CDS | 40.0% | |
| TATCTCCTTTGACAGGTTCA+AGG | + | 57557:7830-7849 | MS.gene074595:CDS | 40.0% | |
| TCAGCACAAGAAACTGTATG+AGG | - | 57557:6557-6576 | MS.gene074595:intergenic | 40.0% | |
| TGCCTCTGTCACAAGAAAAT+GGG | + | 57557:6033-6052 | MS.gene074595:CDS | 40.0% | |
| TTCTTGTGACAGAGGCAAAA+AGG | - | 57557:6030-6049 | MS.gene074595:intergenic | 40.0% | |
| TTGCCTCTGTCACAAGAAAA+TGG | + | 57557:6032-6051 | MS.gene074595:CDS | 40.0% | |
| TTGTTGGTGTGACATAGTCT+AGG | - | 57557:7639-7658 | MS.gene074595:intergenic | 40.0% | |
| ! | CACCGCAACATCAAAGTTTT+TGG | - | 57557:6258-6277 | MS.gene074595:intergenic | 40.0% |
| ! | GAATTTGAGGCGCATGTATT+AGG | - | 57557:7129-7148 | MS.gene074595:intergenic | 40.0% |
| ! | TTTTGGTCACCACCAGATTT+TGG | - | 57557:7607-7626 | MS.gene074595:intergenic | 40.0% |
| !! | CAAGAACCTATTGGCTTACA+AGG | + | 57557:7678-7697 | MS.gene074595:CDS | 40.0% |
| !! | TGTCTGGAATGTGTTGTTTG+GGG | - | 57557:6921-6940 | MS.gene074595:intergenic | 40.0% |
| CCTAACCGTAATTCAGCTAG+AGG | + | 57557:6485-6504 | MS.gene074595:CDS | 45.0% | |
| CCTCTAGCTGAATTACGGTT+AGG | - | 57557:6488-6507 | MS.gene074595:intergenic | 45.0% | |
| CCTTGTCAATGCTGTTGCAA+AGG | + | 57557:6122-6141 | MS.gene074595:CDS | 45.0% | |
| CGCACTCAATGTCCAAAATC+TGG | + | 57557:7592-7611 | MS.gene074595:CDS | 45.0% | |
| GCCACACTATAGGAAAGTCA+AGG | + | 57557:7482-7501 | MS.gene074595:CDS | 45.0% | |
| GCCTCTGTCACAAGAAAATG+GGG | + | 57557:6034-6053 | MS.gene074595:CDS | 45.0% | |
| GGCCACGACTTTATATCACA+TGG | - | 57557:6232-6251 | MS.gene074595:intergenic | 45.0% | |
| GTAGAGTCTTTGCCTAAAGC+TGG | - | 57557:7512-7531 | MS.gene074595:intergenic | 45.0% | |
| GTAGCCTCGACACTTCAAAT+TGG | + | 57557:6304-6323 | MS.gene074595:intron | 45.0% | |
| TATCTGACACCGACACATGT+TGG | - | 57557:6338-6357 | MS.gene074595:intergenic | 45.0% | |
| TCACTAGGTGCAAGCTTAAG+TGG | + | 57557:6875-6894 | MS.gene074595:CDS | 45.0% | |
| TCCACCAGCCTACACATAAA+AGG | - | 57557:6822-6841 | MS.gene074595:intergenic | 45.0% | |
| TCTCCTTTGACAGGTTCAAG+GGG | + | 57557:7832-7851 | MS.gene074595:CDS | 45.0% | |
| TGTAAAGGGAGCCACACTAT+AGG | + | 57557:7472-7491 | MS.gene074595:intron | 45.0% | |
| TTTCCCCTTGAACCTGTCAA+AGG | - | 57557:7838-7857 | MS.gene074595:intergenic | 45.0% | |
| ! | ACCCCATTTTCTTGTGACAG+AGG | - | 57557:6038-6057 | MS.gene074595:intergenic | 45.0% |
| ! | CTTGCTTGCCATTTCCAGTT+TGG | - | 57557:7537-7556 | MS.gene074595:intergenic | 45.0% |
| ! | TCCTTTTATGTGTAGGCTGG+TGG | + | 57557:6818-6837 | MS.gene074595:intron | 45.0% |
| !! | CCTTTGCAACAGCATTGACA+AGG | - | 57557:6125-6144 | MS.gene074595:intergenic | 45.0% |
| !! | GTCTCCAATTTGAAGTGTCG+AGG | - | 57557:6311-6330 | MS.gene074595:intergenic | 45.0% |
| !! | TGCAACAGCATTGACAAGGA+TGG | - | 57557:6121-6140 | MS.gene074595:intergenic | 45.0% |
| AGTCAAGGTGCACCAGCTTT+AGG | + | 57557:7497-7516 | MS.gene074595:CDS | 50.0% | |
| AGTGAGTCTCTTCTGCCTAG+AGG | - | 57557:6860-6879 | MS.gene074595:intergenic | 50.0% | |
| CTAGGCAGAAGAGACTCACT+AGG | + | 57557:6860-6879 | MS.gene074595:CDS | 50.0% | |
| GAGACGTGTCCAACATGTGT+CGG | + | 57557:6326-6345 | MS.gene074595:intron | 50.0% | |
| TGGGGCTGGAATGTTGTTGT+TGG | - | 57557:6903-6922 | MS.gene074595:intergenic | 50.0% | |
| !! | TGGAATGTGTTGTTTGGGGC+TGG | - | 57557:6917-6936 | MS.gene074595:intergenic | 50.0% |
| ! | GTAGGCTGGTGGACCAAACT+GGG | + | 57557:6829-6848 | MS.gene074595:intron | 55.0% |
| ! | TGTAGGCTGGTGGACCAAAC+TGG | + | 57557:6828-6847 | MS.gene074595:intron | 55.0% |
| !! | CCAAACTGGGAAGTGCCTCT+AGG | + | 57557:6842-6861 | MS.gene074595:CDS | 55.0% |
| !! | CCTAGAGGCACTTCCCAGTT+TGG | - | 57557:6845-6864 | MS.gene074595:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57557 | gene | 5976 | 7876 | 5976 | ID=MS.gene074595 |
| 57557 | mRNA | 5976 | 7876 | 5976 | ID=MS.gene074595.t1;Parent=MS.gene074595 |
| 57557 | exon | 5976 | 6200 | 5976 | ID=MS.gene074595.t1.exon1;Parent=MS.gene074595.t1 |
| 57557 | CDS | 5976 | 6200 | 5976 | ID=cds.MS.gene074595.t1;Parent=MS.gene074595.t1 |
| 57557 | exon | 6422 | 6613 | 6422 | ID=MS.gene074595.t1.exon2;Parent=MS.gene074595.t1 |
| 57557 | CDS | 6422 | 6613 | 6422 | ID=cds.MS.gene074595.t1;Parent=MS.gene074595.t1 |
| 57557 | exon | 6833 | 6998 | 6833 | ID=MS.gene074595.t1.exon3;Parent=MS.gene074595.t1 |
| 57557 | CDS | 6833 | 6998 | 6833 | ID=cds.MS.gene074595.t1;Parent=MS.gene074595.t1 |
| 57557 | exon | 7479 | 7876 | 7479 | ID=MS.gene074595.t1.exon4;Parent=MS.gene074595.t1 |
| 57557 | CDS | 7479 | 7876 | 7479 | ID=cds.MS.gene074595.t1;Parent=MS.gene074595.t1 |
| Gene Sequence |
| Protein sequence |
